>ref|XM_470955.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 828

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                            
Query: 316 tcgaccaacaccatcnaccggagctcacagttggcaaagctcttgccca 364
           ||||||||||||||| |||||||||||||||||||||||  ||||||||
Sbjct: 737 tcgaccaacaccatcgaccggagctcacagttggcaaagtgcttgccca 689

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                       
Query: 316    tcgaccaacaccatcnaccggagctcacagttggcaaagct 356
              ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 172242 tcgaccaacaccatcgaccggagctcacagttggcaaagct 172202

>emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0068L06,
              complete sequence
          Length = 145517

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                       
Query: 316    tcgaccaacaccatcnaccggagctcacagttggcaaagct 356
              ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 103529 tcgaccaacaccatcgaccggagctcacagttggcaaagct 103489

>gb|AY106961.1| Zea mays PCO078813 mRNA sequence
          Length = 1308

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 310 cttctgtcgaccaacaccatcnaccggagctcacagttggcaaag 354
           |||||||| |||||||||||| |||| ||||| ||||| ||||||
Sbjct: 894 cttctgtcaaccaacaccatcgaccgtagctcgcagtttgcaaag 850

>gb|AC102032.9| Mus musculus chromosome 3, clone RP23-78J18, complete sequence
          Length = 194207

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 39     gacaacaaatcanataaacataaccaat 66
              ||||||||||||  ||||||||||||||
Sbjct: 122430 gacaacaaatcagctaaacataaccaat 122457

>gb|AE000783.1| Borrelia burgdorferi B31, complete genome
          Length = 910724

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 340    tcacagttggcaaagctcttg 360
              |||||||||||||||||||||
Sbjct: 389911 tcacagttggcaaagctcttg 389891

>gb|AC151775.1| Ornithorhynchus anatinus chromosome UNK clone OABb-307A1, complete
              sequence
          Length = 195598

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    gcttcttcagcctgcttctt 227
              ||||||||||||||||||||
Sbjct: 151567 gcttcttcagcctgcttctt 151548

>gb|AC163672.4| Mus musculus BAC clone RP23-23B15 from chromosome 3, complete sequence
          Length = 190599

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      ataagtccttattcccatga 21
              ||||||||||||||||||||
Sbjct: 183886 ataagtccttattcccatga 183905

>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence
          Length = 285506

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    tctcagttcattgtcagcca 144
              ||||||||||||||||||||
Sbjct: 185365 tctcagttcattgtcagcca 185384

>gb|AC121533.6| Mus musculus chromosome 9, clone RP24-555P22, complete sequence
          Length = 175009

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 343   cagttggcaaagctcttgcc 362
             ||||||||||||||||||||
Sbjct: 25172 cagttggcaaagctcttgcc 25191

>gb|AC123066.4| Mus musculus BAC clone RP23-262I13 from chromosome 19, complete
            sequence
          Length = 206333

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 214  tcagcctgcttcttctctgc 233
            ||||||||||||||||||||
Sbjct: 8564 tcagcctgcttcttctctgc 8583

>gb|AC132389.3| Mus musculus BAC clone RP23-448A4 from chromosome 19, complete sequence
          Length = 165998

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   tcagcctgcttcttctctgc 233
             ||||||||||||||||||||
Sbjct: 35334 tcagcctgcttcttctctgc 35315

>gb|AC109247.14| Mus musculus chromosome 9, clone RP23-462C14, complete sequence
          Length = 225020

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 343    cagttggcaaagctcttgcc 362
              ||||||||||||||||||||
Sbjct: 215962 cagttggcaaagctcttgcc 215981

>gb|AC132684.3| Mus musculus BAC clone RP23-277L20 from 9, complete sequence
          Length = 182976

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 343    cagttggcaaagctcttgcc 362
              ||||||||||||||||||||
Sbjct: 168178 cagttggcaaagctcttgcc 168159

>gb|AY367771.1| Triticum aestivum HMW glutenin subunit (1Bx14) gene, complete cds
          Length = 4021

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 125  tctcagttcattgtcagcca 144
            ||||||||||||||||||||
Sbjct: 3715 tctcagttcattgtcagcca 3734

>gb|AC100803.11| Homo sapiens chromosome 8, clone CTD-3064M3, complete sequence
          Length = 152418

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 340    tcacagttggcaaagctctt 359
              ||||||||||||||||||||
Sbjct: 130462 tcacagttggcaaagctctt 130443

>gb|AC115080.13| Mus musculus chromosome 7, clone RP24-464M7, complete sequence
          Length = 158221

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   tctattctcagttcattgtc 139
             ||||||||||||||||||||
Sbjct: 58151 tctattctcagttcattgtc 58132

>dbj|AK187396.1| Mus musculus cDNA, clone:Y0G0141K08, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000040406, based on BLAT search
          Length = 167

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 209 cttcttcagcctgcttcttc 228
           ||||||||||||||||||||
Sbjct: 93  cttcttcagcctgcttcttc 74

>emb|BX001012.6| Zebrafish DNA sequence from clone CH211-11C20 in linkage group 4,
             complete sequence
          Length = 158481

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   gtaaaagaatcaaagacatc 177
             ||||||||||||||||||||
Sbjct: 22300 gtaaaagaatcaaagacatc 22319

>emb|Z69239.1|SPAC1D4 S.pombe chromosome I cosmid c1D4
          Length = 31201

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    tgagcaataaacagcaagtc 103
             ||||||||||||||||||||
Sbjct: 24513 tgagcaataaacagcaagtc 24494

>dbj|AP005792.5| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1533H12, complete
              sequence
          Length = 141371

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 340    tcacagttggcaaagctctt 359
              ||||||||||||||||||||
Sbjct: 137454 tcacagttggcaaagctctt 137435

>dbj|AP005888.3| Homo sapiens genomic DNA, chromosome 8q24.3, clone: KB1897C9, complete
             sequence
          Length = 46561

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 340   tcacagttggcaaagctctt 359
             ||||||||||||||||||||
Sbjct: 26084 tcacagttggcaaagctctt 26065

>gb|AC132234.5| Mus musculus BAC clone RP24-496A9 from 3, complete sequence
          Length = 127400

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 198   gttcttgttagcttcttcagcctg 221
             |||||||||| |||||||||||||
Sbjct: 54229 gttcttgttatcttcttcagcctg 54252

>gb|AC139333.4| Mus musculus BAC clone RP24-83F12 from 3, complete sequence
          Length = 162197

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      ataagtccttattcccatga 21
              ||||||||||||||||||||
Sbjct: 111064 ataagtccttattcccatga 111045

>gb|AC121109.5| Mus musculus chromosome 7, clone RP24-445I8, complete sequence
          Length = 167819

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    tctattctcagttcattgtc 139
              ||||||||||||||||||||
Sbjct: 137296 tctattctcagttcattgtc 137277


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,383,807
Number of Sequences: 3902068
Number of extensions: 2383807
Number of successful extensions: 44271
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44230
Number of HSP's gapped (non-prelim): 41
length of query: 369
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 347
effective length of database: 17,147,199,772
effective search space: 5950078320884
effective search space used: 5950078320884
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)