ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26g11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY108655.1| Zea mays PCO136147 mRNA sequence 337 3e-89
2ref|NM_187170.2| Oryza sativa (japonica cultivar-group), mRNA 297 2e-77
3dbj|AK058258.1| Oryza sativa (japonica cultivar-group) cDNA clon... 297 2e-77
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
5dbj|AP005752.5| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
6ref|XM_550645.1| Oryza sativa (japonica cultivar-group), mRNA 143 8e-31
7ref|XM_550644.1| Oryza sativa (japonica cultivar-group), mRNA 137 5e-29
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
9dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
10dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
11gb|AF447452.1| Lycopersicon esculentum cultivar Moneymaker galac... 84 6e-13
12emb|CR962133.1| Medicago truncatula chromosome 5 clone mth2-17h8... 48 0.033
13ref|XM_508802.1| PREDICTED: Pan troglodytes similar to Trafficki... 46 0.13
14ref|NM_016146.1| Homo sapiens trafficking protein particle compl... 46 0.13
15gb|BC010866.1| Homo sapiens trafficking protein particle complex... 46 0.13
16dbj|AK097630.1| Homo sapiens cDNA FLJ40311 fis, clone TESTI2029785 46 0.13
17emb|CR616613.1| full-length cDNA clone CS0DJ013YO16 of T cells (... 46 0.13
18emb|CR614639.1| full-length cDNA clone CS0DI081YM05 of Placenta ... 46 0.13
19emb|CR599720.1| full-length cDNA clone CS0DJ010YH19 of T cells (... 46 0.13
20emb|CR591716.1| full-length cDNA clone CS0DI054YB11 of Placenta ... 46 0.13
21gb|AF078862.1|AF078862 Homo sapiens PTD009 mRNA, complete cds 46 0.13
22gb|AF161520.1|AF161520 Homo sapiens HSPC172 mRNA, complete cds 46 0.13
23gb|AF151862.1|AF151862 Homo sapiens CGI-104 protein mRNA, comple... 46 0.13
24gb|AF105025.1|AF105025 Homo sapiens unknown mRNA 46 0.13
25gb|U41541.2| Caenorhabditis elegans cosmid C41A3, complete sequence 42 2.1
26emb|AL590394.7| Human DNA sequence from clone RP11-435I7 on chro... 42 2.1
27ref|XM_969433.1| PREDICTED: Tribolium castaneum similar to CG929... 42 2.1
28dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 42 2.1
29ref|NM_076522.1| Caenorhabditis elegans C41A3.1 (C41A3.1) mRNA, ... 42 2.1
30gb|AC149888.2| Xenopus tropicalis clone ISB-149I7, complete sequ... 42 2.1
31gb|AC101924.24| Mus musculus chromosome 1, clone RP24-391B5, com... 40 8.2
32gb|AC103597.21| Mus musculus chromosome 18, clone RP23-435G4, co... 40 8.2
33gb|U80032.1| Caenorhabditis elegans cosmid C32E12, complete sequ... 40 8.2
34gb|AC113181.7| Mus musculus chromosome 5, clone RP23-359I6, comp... 40 8.2
35gb|AC129187.4| Mus musculus BAC clone RP23-427D4 from chromosome... 40 8.2
36gb|AC124743.5| Mus musculus BAC clone RP23-219C1 from 1, complet... 40 8.2
37gb|AC002487.1| Homo sapiens BAC clone CTA-369K23 from 7, complet... 40 8.2
38emb|AL513302.15| Human DNA sequence from clone RP11-226L15 on ch... 40 8.2
39gb|AC117465.13| Homo sapiens 3 BAC RP11-706D8 (Roswell Park Canc... 40 8.2
40gb|AC153567.6| Mus musculus 10 BAC RP23-187C5 (Roswell Park Canc... 40 8.2
41gb|AC091841.3| Homo sapiens chromosome 5 clone CTD-2137D4, compl... 40 8.2
42emb|CR859388.1| Pongo pygmaeus mRNA; cDNA DKFZp459H1242 (from cl... 40 8.2
43emb|BX548248.9| Zebrafish DNA sequence from clone DKEY-245P14 in... 40 8.2
44gb|AC000100.2| Homo sapiens Chromosome 19 BAC Clone 959a10, comp... 40 8.2
45gb|AC073649.3|AC073649 Homo sapiens clone RP11-823D8, complete s... 40 8.2
46gb|AC010682.3| Homo sapiens BAC clone RP11-251M8 from Y, complet... 40 8.2
47gb|AC139777.3| Homo sapiens chromosome 5 clone RP11-1011D24, com... 40 8.2
48ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P... 40 8.2
49dbj|BS000168.2| Pan troglodytes chromosome 22 clone:RP43-021P14,... 40 8.2
50gb|AC007727.2|F8K7 Arabidopsis thaliana chromosome 1 BAC F8K7 se... 40 8.2
51gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 8.2
52dbj|AP001982.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.2
53emb|CT010499.9| Mouse DNA sequence from clone RP23-211K24 on chr... 40 8.2 
>gb|AY108655.1| Zea mays PCO136147 mRNA sequence
          Length = 1310

 Score =  337 bits (170), Expect = 3e-89
 Identities = 326/378 (86%)
 Strand = Plus / Minus

                                                                       
Query: 223 ttcaccggcccagaagtgcgacacggtccttctggatgacctgggctaggttgaggtcaa 282
           ||||||| |||||||| || ||||||||||||||||| | ||| || |||||| | ||||
Sbjct: 873 ttcaccgacccagaagcgcaacacggtccttctggatcatctgagccaggttgtgatcaa 814

                                                                       
Query: 283 agagctcacaccggatcggcatttccatctcgtagaatgggttcttcaaaacaaactcag 342
           | |||||||||||||||||||| |||||||| ||||| || ||||||||||| || || |
Sbjct: 813 acagctcacaccggatcggcatctccatctcatagaacggattcttcaaaacgaagtccg 754

                                                                       
Query: 343 tgtacagctcatatattgttttcagcaggatttccatattttgagcgcctgtttcgcata 402
           ||||||||||||| ||   ||||||||| |||||||| ||| |||| || ||||||||||
Sbjct: 753 tgtacagctcataaatcactttcagcagcatttccatgtttggagctccagtttcgcata 694

                                                                       
Query: 403 caacgaaaaatttcgtccctgtgagggattggaagcaatggaggtcaaaattgtgggctt 462
           ||||||||||||| ||||||||||||||||| ||||||||||| ||||| || || ||||
Sbjct: 693 caacgaaaaattttgtccctgtgagggattgaaagcaatggagatcaaagttatgagctt 634

                                                                       
Query: 463 gtaagaggtcaatgccagtacagccagtggtaggggacagctgctgggagattgcgtgca 522
           ||||||| ||||||||||||||||||| ||||||||| || ||||||||||| || ||||
Sbjct: 633 gtaagagatcaatgccagtacagccaggggtaggggagagttgctgggagatagcatgca 574

                                                                       
Query: 523 tagagtgccagagactcgcgaggcgtaaactgtcgttggtgtccattctccctgccgagc 582
           | || ||||| ||||| || |  | || |||||| ||||| ||||| |||||||| || |
Sbjct: 573 tcgaatgccacagacttgctaatcttagactgtcattggtatccatcctccctgctgaac 514

                             
Query: 583 catagtccttgtagtata 600
           ||||||||||||||||||
Sbjct: 513 catagtccttgtagtata 496
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>ref|NM_187170.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 629

 Score =  297 bits (150), Expect = 2e-77
 Identities = 315/370 (85%)
 Strand = Plus / Minus

                                                                       
Query: 231 cccagaagtgcgacacggtccttctggatgacctgggctaggttgaggtcaaagagctca 290
           |||||||||| ||| ||||||||||| |||||||| || |||||||| ||||| ||||||
Sbjct: 438 cccagaagtgtgacgcggtccttctgaatgacctgagccaggttgagatcaaaaagctca 379

                                                                       
Query: 291 caccggatcggcatttccatctcgtagaatgggttcttcaaaacaaactcagtgtacagc 350
           || || || ||||| ||||||||||||||||| || |||| |||||| || ||||| |||
Sbjct: 378 caacgaattggcatctccatctcgtagaatggatttttcagaacaaaatccgtgtagagc 319

                                                                       
Query: 351 tcatatattgttttcagcaggatttccatattttgagcgcctgtttcgcatacaacgaaa 410
           || |||||   |||||| ||  | || ||||||||||| || |||||||||||| | |||
Sbjct: 318 tcgtatatgactttcagtagagtctcgatattttgagcaccagtttcgcatacagcaaaa 259

                                                                       
Query: 411 aatttcgtccctgtgagggattggaagcaatggaggtcaaaattgtgggcttgtaagagg 470
           || || |||||||||||||| |||||||||||||| ||||| |||||||||||||  |||
Sbjct: 258 aactttgtccctgtgagggactggaagcaatggagatcaaagttgtgggcttgtagaagg 199

                                                                       
Query: 471 tcaatgccagtacagccagtggtaggggacagctgctgggagattgcgtgcatagagtgc 530
           ||||||||   ||||||||  ||||||||||||||||||||||| || ||||| || |||
Sbjct: 198 tcaatgccttcacagccaggtgtaggggacagctgctgggagatagcatgcatggaatgc 139

                                                                       
Query: 531 cagagactcgcgaggcgtaaactgtcgttggtgtccattctccctgccgagccatagtcc 590
           || ||||| || | ||||| |||||| ||||||||| | |||||||| ||||||||||||
Sbjct: 138 caaagacttgccaagcgtagactgtcattggtgtccgtcctccctgctgagccatagtcc 79

                     
Query: 591 ttgtagtata 600
           ||||||||||
Sbjct: 78  ttgtagtata 69
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>dbj|AK058258.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-E11, full
           insert sequence
          Length = 629

 Score =  297 bits (150), Expect = 2e-77
 Identities = 315/370 (85%)
 Strand = Plus / Minus

                                                                       
Query: 231 cccagaagtgcgacacggtccttctggatgacctgggctaggttgaggtcaaagagctca 290
           |||||||||| ||| ||||||||||| |||||||| || |||||||| ||||| ||||||
Sbjct: 438 cccagaagtgtgacgcggtccttctgaatgacctgagccaggttgagatcaaaaagctca 379

                                                                       
Query: 291 caccggatcggcatttccatctcgtagaatgggttcttcaaaacaaactcagtgtacagc 350
           || || || ||||| ||||||||||||||||| || |||| |||||| || ||||| |||
Sbjct: 378 caacgaattggcatctccatctcgtagaatggatttttcagaacaaaatccgtgtagagc 319

                                                                       
Query: 351 tcatatattgttttcagcaggatttccatattttgagcgcctgtttcgcatacaacgaaa 410
           || |||||   |||||| ||  | || ||||||||||| || |||||||||||| | |||
Sbjct: 318 tcgtatatgactttcagtagagtctcgatattttgagcaccagtttcgcatacagcaaaa 259

                                                                       
Query: 411 aatttcgtccctgtgagggattggaagcaatggaggtcaaaattgtgggcttgtaagagg 470
           || || |||||||||||||| |||||||||||||| ||||| |||||||||||||  |||
Sbjct: 258 aactttgtccctgtgagggactggaagcaatggagatcaaagttgtgggcttgtagaagg 199

                                                                       
Query: 471 tcaatgccagtacagccagtggtaggggacagctgctgggagattgcgtgcatagagtgc 530
           ||||||||   ||||||||  ||||||||||||||||||||||| || ||||| || |||
Sbjct: 198 tcaatgccttcacagccaggtgtaggggacagctgctgggagatagcatgcatggaatgc 139

                                                                       
Query: 531 cagagactcgcgaggcgtaaactgtcgttggtgtccattctccctgccgagccatagtcc 590
           || ||||| || | ||||| |||||| ||||||||| | |||||||| ||||||||||||
Sbjct: 138 caaagacttgccaagcgtagactgtcattggtgtccgtcctccctgctgagccatagtcc 79

                     
Query: 591 ttgtagtata 600
           ||||||||||
Sbjct: 78  ttgtagtata 69
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  159 bits (80), Expect = 1e-35
 Identities = 149/172 (86%)
 Strand = Plus / Minus

                                                                            
Query: 420      cctgtgagggattggaagcaatggaggtcaaaattgtgggcttgtaagaggtcaatgcca 479
                ||||||||||| |||||||||||||| ||||| |||||||||||||  ||||||||||| 
Sbjct: 15700650 cctgtgagggactggaagcaatggagatcaaagttgtgggcttgtagaaggtcaatgcct 15700591

                                                                            
Query: 480      gtacagccagtggtaggggacagctgctgggagattgcgtgcatagagtgccagagactc 539
                  ||||||||  ||||||||||||||||||||||| || ||||| || ||||| ||||| 
Sbjct: 15700590 tcacagccaggtgtaggggacagctgctgggagatagcatgcatggaatgccaaagactt 15700531

                                                                    
Query: 540      gcgaggcgtaaactgtcgttggtgtccattctccctgccgagccatagtcct 591
                || | ||||| |||||| ||||||||| | |||||||| |||||||||||||
Sbjct: 15700530 gccaagcgtagactgtcattggtgtccgtcctccctgctgagccatagtcct 15700479



 Score =  129 bits (65), Expect = 1e-26
 Identities = 161/193 (83%)
 Strand = Plus / Minus

                                                                            
Query: 231      cccagaagtgcgacacggtccttctggatgacctgggctaggttgaggtcaaagagctca 290
                |||||||||| ||| ||||||||||| |||||||| || |||||||| ||||| ||||||
Sbjct: 15702017 cccagaagtgtgacgcggtccttctgaatgacctgagccaggttgagatcaaaaagctca 15701958

                                                                            
Query: 291      caccggatcggcatttccatctcgtagaatgggttcttcaaaacaaactcagtgtacagc 350
                || || || ||||| ||||||||||||||||| || |||| |||||| || ||||| |||
Sbjct: 15701957 caacgaattggcatctccatctcgtagaatggatttttcagaacaaaatccgtgtagagc 15701898

                                                                            
Query: 351      tcatatattgttttcagcaggatttccatattttgagcgcctgtttcgcatacaacgaaa 410
                || |||||   |||||| ||  | || ||||||||||| || |||||||||||| | |||
Sbjct: 15701897 tcgtatatgactttcagtagagtctcgatattttgagcaccagtttcgcatacagcaaaa 15701838

                             
Query: 411      aatttcgtccctg 423
                || || |||||||
Sbjct: 15701837 aactttgtccctg 15701825
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>dbj|AP005752.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0075N02
          Length = 186945

 Score =  159 bits (80), Expect = 1e-35
 Identities = 149/172 (86%)
 Strand = Plus / Minus

                                                                         
Query: 420   cctgtgagggattggaagcaatggaggtcaaaattgtgggcttgtaagaggtcaatgcca 479
             ||||||||||| |||||||||||||| ||||| |||||||||||||  ||||||||||| 
Sbjct: 98507 cctgtgagggactggaagcaatggagatcaaagttgtgggcttgtagaaggtcaatgcct 98448

                                                                         
Query: 480   gtacagccagtggtaggggacagctgctgggagattgcgtgcatagagtgccagagactc 539
               ||||||||  ||||||||||||||||||||||| || ||||| || ||||| ||||| 
Sbjct: 98447 tcacagccaggtgtaggggacagctgctgggagatagcatgcatggaatgccaaagactt 98388

                                                                 
Query: 540   gcgaggcgtaaactgtcgttggtgtccattctccctgccgagccatagtcct 591
             || | ||||| |||||| ||||||||| | |||||||| |||||||||||||
Sbjct: 98387 gccaagcgtagactgtcattggtgtccgtcctccctgctgagccatagtcct 98336



 Score =  129 bits (65), Expect = 1e-26
 Identities = 161/193 (83%)
 Strand = Plus / Minus

                                                                         
Query: 231   cccagaagtgcgacacggtccttctggatgacctgggctaggttgaggtcaaagagctca 290
             |||||||||| ||| ||||||||||| |||||||| || |||||||| ||||| ||||||
Sbjct: 99874 cccagaagtgtgacgcggtccttctgaatgacctgagccaggttgagatcaaaaagctca 99815

                                                                         
Query: 291   caccggatcggcatttccatctcgtagaatgggttcttcaaaacaaactcagtgtacagc 350
             || || || ||||| ||||||||||||||||| || |||| |||||| || ||||| |||
Sbjct: 99814 caacgaattggcatctccatctcgtagaatggatttttcagaacaaaatccgtgtagagc 99755

                                                                         
Query: 351   tcatatattgttttcagcaggatttccatattttgagcgcctgtttcgcatacaacgaaa 410
             || |||||   |||||| ||  | || ||||||||||| || |||||||||||| | |||
Sbjct: 99754 tcgtatatgactttcagtagagtctcgatattttgagcaccagtttcgcatacagcaaaa 99695

                          
Query: 411   aatttcgtccctg 423
             || || |||||||
Sbjct: 99694 aactttgtccctg 99682
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>ref|XM_550645.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 267

 Score =  143 bits (72), Expect = 8e-31
 Identities = 153/180 (85%)
 Strand = Plus / Minus

                                                                       
Query: 421 ctgtgagggattggaagcaatggaggtcaaaattgtgggcttgtaagaggtcaatgccag 480
           |||||||||| |||||||||||||| ||||| || ||||||||||  |||||||||||  
Sbjct: 235 ctgtgagggactggaagcaatggagatcaaagttatgggcttgtagaaggtcaatgcctt 176

                                                                       
Query: 481 tacagccagtggtaggggacagctgctgggagattgcgtgcatagagtgccagagactcg 540
             ||||||   ||||||||||||||||||||||| || ||||| || ||||| ||||| |
Sbjct: 175 cgcagccatgtgtaggggacagctgctgggagatagcatgcatggaatgccaaagacttg 116

                                                                       
Query: 541 cgaggcgtaaactgtcgttggtgtccattctccctgccgagccatagtccttgtagtata 600
           | | ||||| |||||| ||||||||| | || ||||| ||||||||||||||||||||||
Sbjct: 115 ccaagcgtagactgtcattggtgtccgtcctacctgctgagccatagtccttgtagtata 56
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>ref|XM_550644.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 219

 Score =  137 bits (69), Expect = 5e-29
 Identities = 162/193 (83%)
 Strand = Plus / Minus

                                                                       
Query: 231 cccagaagtgcgacacggtccttctggatgacctgggctaggttgaggtcaaagagctca 290
           |||||||||| ||| ||||||||||| |||||||| || |||||||| ||||| ||||||
Sbjct: 212 cccagaagtgtgacgcggtccttctgaatgacctgagccaggttgagatcaaaaagctca 153

                                                                       
Query: 291 caccggatcggcatttccatctcgtagaatgggttcttcaaaacaaactcagtgtacagc 350
           || || || ||||| ||||||||||||||||| || ||||||||||| || ||||| |||
Sbjct: 152 caacgaattggcatctccatctcgtagaatggatttttcaaaacaaaatccgtgtagagc 93

                                                                       
Query: 351 tcatatattgttttcagcaggatttccatattttgagcgcctgtttcgcatacaacgaaa 410
           || |||||   |||||| ||  | || ||||||||||| || |||||||||||| | |||
Sbjct: 92  tcgtatatgactttcagtagtgtctcgatattttgagcaccagtttcgcatacagcaaaa 33

                        
Query: 411 aatttcgtccctg 423
           || || |||||||
Sbjct: 32  aactttgtccctg 20
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  137 bits (69), Expect = 5e-29
 Identities = 162/193 (83%)
 Strand = Plus / Plus

                                                                           
Query: 231     cccagaagtgcgacacggtccttctggatgacctgggctaggttgaggtcaaagagctca 290
               |||||||||| ||| ||||||||||| |||||||| || |||||||| ||||| ||||||
Sbjct: 2641551 cccagaagtgtgacgcggtccttctgaatgacctgagccaggttgagatcaaaaagctca 2641610

                                                                           
Query: 291     caccggatcggcatttccatctcgtagaatgggttcttcaaaacaaactcagtgtacagc 350
               || || || ||||| ||||||||||||||||| || ||||||||||| || ||||| |||
Sbjct: 2641611 caacgaattggcatctccatctcgtagaatggatttttcaaaacaaaatccgtgtagagc 2641670

                                                                           
Query: 351     tcatatattgttttcagcaggatttccatattttgagcgcctgtttcgcatacaacgaaa 410
               || |||||   |||||| ||  | || ||||||||||| || |||||||||||| | |||
Sbjct: 2641671 tcgtatatgactttcagtagtgtctcgatattttgagcaccagtttcgcatacagcaaaa 2641730

                            
Query: 411     aatttcgtccctg 423
               || || |||||||
Sbjct: 2641731 aactttgtccctg 2641743



 Score =  127 bits (64), Expect = 5e-26
 Identities = 145/172 (84%)
 Strand = Plus / Plus

                                                                           
Query: 420     cctgtgagggattggaagcaatggaggtcaaaattgtgggcttgtaagaggtcaatgcca 479
               ||||||||||| |||||||||||||| ||||| || ||||||||||  ||||||||||| 
Sbjct: 2642925 cctgtgagggactggaagcaatggagatcaaagttatgggcttgtagaaggtcaatgcct 2642984

                                                                           
Query: 480     gtacagccagtggtaggggacagctgctgggagattgcgtgcatagagtgccagagactc 539
                  ||||||   ||||||||||||||||||||||| || ||||| || ||||| ||||| 
Sbjct: 2642985 tcgcagccatgtgtaggggacagctgctgggagatagcatgcatggaatgccaaagactt 2643044

                                                                   
Query: 540     gcgaggcgtaaactgtcgttggtgtccattctccctgccgagccatagtcct 591
               || | ||||| |||||| ||||||||| | || ||||| |||||||||||||
Sbjct: 2643045 gccaagcgtagactgtcattggtgtccgtcctacctgctgagccatagtcct 2643096
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>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0710H01
          Length = 187107

 Score =  137 bits (69), Expect = 5e-29
 Identities = 162/193 (83%)
 Strand = Plus / Plus

                                                                         
Query: 231   cccagaagtgcgacacggtccttctggatgacctgggctaggttgaggtcaaagagctca 290
             |||||||||| ||| ||||||||||| |||||||| || |||||||| ||||| ||||||
Sbjct: 96892 cccagaagtgtgacgcggtccttctgaatgacctgagccaggttgagatcaaaaagctca 96951

                                                                         
Query: 291   caccggatcggcatttccatctcgtagaatgggttcttcaaaacaaactcagtgtacagc 350
             || || || ||||| ||||||||||||||||| || ||||||||||| || ||||| |||
Sbjct: 96952 caacgaattggcatctccatctcgtagaatggatttttcaaaacaaaatccgtgtagagc 97011

                                                                         
Query: 351   tcatatattgttttcagcaggatttccatattttgagcgcctgtttcgcatacaacgaaa 410
             || |||||   |||||| ||  | || ||||||||||| || |||||||||||| | |||
Sbjct: 97012 tcgtatatgactttcagtagtgtctcgatattttgagcaccagtttcgcatacagcaaaa 97071

                          
Query: 411   aatttcgtccctg 423
             || || |||||||
Sbjct: 97072 aactttgtccctg 97084



 Score =  127 bits (64), Expect = 5e-26
 Identities = 145/172 (84%)
 Strand = Plus / Plus

                                                                         
Query: 420   cctgtgagggattggaagcaatggaggtcaaaattgtgggcttgtaagaggtcaatgcca 479
             ||||||||||| |||||||||||||| ||||| || ||||||||||  ||||||||||| 
Sbjct: 98266 cctgtgagggactggaagcaatggagatcaaagttatgggcttgtagaaggtcaatgcct 98325

                                                                         
Query: 480   gtacagccagtggtaggggacagctgctgggagattgcgtgcatagagtgccagagactc 539
                ||||||   ||||||||||||||||||||||| || ||||| || ||||| ||||| 
Sbjct: 98326 tcgcagccatgtgtaggggacagctgctgggagatagcatgcatggaatgccaaagactt 98385

                                                                 
Query: 540   gcgaggcgtaaactgtcgttggtgtccattctccctgccgagccatagtcct 591
             || | ||||| |||||| ||||||||| | || ||||| |||||||||||||
Sbjct: 98386 gccaagcgtagactgtcattggtgtccgtcctacctgctgagccatagtcct 98437
to top
>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0529C07
          Length = 174011

 Score =  137 bits (69), Expect = 5e-29
 Identities = 162/193 (83%)
 Strand = Plus / Plus

                                                                         
Query: 231   cccagaagtgcgacacggtccttctggatgacctgggctaggttgaggtcaaagagctca 290
             |||||||||| ||| ||||||||||| |||||||| || |||||||| ||||| ||||||
Sbjct: 53298 cccagaagtgtgacgcggtccttctgaatgacctgagccaggttgagatcaaaaagctca 53357

                                                                         
Query: 291   caccggatcggcatttccatctcgtagaatgggttcttcaaaacaaactcagtgtacagc 350
             || || || ||||| ||||||||||||||||| || ||||||||||| || ||||| |||
Sbjct: 53358 caacgaattggcatctccatctcgtagaatggatttttcaaaacaaaatccgtgtagagc 53417

                                                                         
Query: 351   tcatatattgttttcagcaggatttccatattttgagcgcctgtttcgcatacaacgaaa 410
             || |||||   |||||| ||  | || ||||||||||| || |||||||||||| | |||
Sbjct: 53418 tcgtatatgactttcagtagtgtctcgatattttgagcaccagtttcgcatacagcaaaa 53477

                          
Query: 411   aatttcgtccctg 423
             || || |||||||
Sbjct: 53478 aactttgtccctg 53490



 Score =  127 bits (64), Expect = 5e-26
 Identities = 145/172 (84%)
 Strand = Plus / Plus

                                                                         
Query: 420   cctgtgagggattggaagcaatggaggtcaaaattgtgggcttgtaagaggtcaatgcca 479
             ||||||||||| |||||||||||||| ||||| || ||||||||||  ||||||||||| 
Sbjct: 54672 cctgtgagggactggaagcaatggagatcaaagttatgggcttgtagaaggtcaatgcct 54731

                                                                         
Query: 480   gtacagccagtggtaggggacagctgctgggagattgcgtgcatagagtgccagagactc 539
                ||||||   ||||||||||||||||||||||| || ||||| || ||||| ||||| 
Sbjct: 54732 tcgcagccatgtgtaggggacagctgctgggagatagcatgcatggaatgccaaagactt 54791

                                                                 
Query: 540   gcgaggcgtaaactgtcgttggtgtccattctccctgccgagccatagtcct 591
             || | ||||| |||||| ||||||||| | || ||||| |||||||||||||
Sbjct: 54792 gccaagcgtagactgtcattggtgtccgtcctacctgctgagccatagtcct 54843
to top
>gb|AF447452.1| Lycopersicon esculentum cultivar Moneymaker galactinol synthase
            (GOLS1) gene, complete cds
          Length = 3789

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 51/54 (94%)
 Strand = Plus / Plus

                                                                  
Query: 278  gtcaaagagctcacaccggatcggcatttccatctcgtagaatgggttcttcaa 331
            ||||||||||||||||||||||||||||||||| || ||||| |||||||||||
Sbjct: 3111 gtcaaagagctcacaccggatcggcatttccatttcatagaaagggttcttcaa 3164
to top
>emb|CR962133.1| Medicago truncatula chromosome 5 clone mth2-17h8, COMPLETE SEQUENCE
          Length = 114811

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 420   cctgtgagggattggaagcaatggaggtcaaa 451
             ||||| || |||||||||||||||||||||||
Sbjct: 41446 cctgtaagtgattggaagcaatggaggtcaaa 41415



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                      
Query: 279   tcaaagagctcacaccggatcggcatttccatctcgtagaatgggttcttcaaaaca 335
             |||||||||||||| || || ||||| || || || ||||| || ||||||||||||
Sbjct: 42815 tcaaagagctcacatcgaataggcatctctatttcatagaagggattcttcaaaaca 42759
to top
>ref|XM_508802.1| PREDICTED: Pan troglodytes similar to Trafficking protein particle
           complex subunit 4 (Synbindin) (TRS23 homolog)
           (Hematopoietic stem/progenitor cell protein 172)
           (HSPC172) (PTD009) (CGI-104) (LOC451598), mRNA
          Length = 682

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 277 ggtcaaagagctcacaccggatcggcatttc 307
           |||||||||||||||||| ||| ||||||||
Sbjct: 620 ggtcaaagagctcacacctgataggcatttc 590
to top
>ref|NM_016146.1| Homo sapiens trafficking protein particle complex 4 (TRAPPC4), mRNA
          Length = 1222

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 277 ggtcaaagagctcacaccggatcggcatttc 307
           |||||||||||||||||| ||| ||||||||
Sbjct: 855 ggtcaaagagctcacacctgataggcatttc 825
to top
>gb|BC010866.1| Homo sapiens trafficking protein particle complex 4, mRNA (cDNA
           clone MGC:9507 IMAGE:3876778), complete cds
          Length = 983

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 277 ggtcaaagagctcacaccggatcggcatttc 307
           |||||||||||||||||| ||| ||||||||
Sbjct: 624 ggtcaaagagctcacacctgataggcatttc 594
to top
>dbj|AK097630.1| Homo sapiens cDNA FLJ40311 fis, clone TESTI2029785
          Length = 1963

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 277  ggtcaaagagctcacaccggatcggcatttc 307
            |||||||||||||||||| ||| ||||||||
Sbjct: 1635 ggtcaaagagctcacacctgataggcatttc 1605
to top
>emb|CR616613.1| full-length cDNA clone CS0DJ013YO16 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 1290

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 277 ggtcaaagagctcacaccggatcggcatttc 307
           |||||||||||||||||| ||| ||||||||
Sbjct: 962 ggtcaaagagctcacacctgataggcatttc 932
to top
>emb|CR614639.1| full-length cDNA clone CS0DI081YM05 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 527

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 277 ggtcaaagagctcacaccggatcggcatttc 307
           |||||||||||||||||| ||| ||||||||
Sbjct: 205 ggtcaaagagctcacacctgataggcatttc 175
to top
>emb|CR599720.1| full-length cDNA clone CS0DJ010YH19 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 817

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 277 ggtcaaagagctcacaccggatcggcatttc 307
           |||||||||||||||||| ||| ||||||||
Sbjct: 495 ggtcaaagagctcacacctgataggcatttc 465
to top
>emb|CR591716.1| full-length cDNA clone CS0DI054YB11 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1201

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 277 ggtcaaagagctcacaccggatcggcatttc 307
           |||||||||||||||||| ||| ||||||||
Sbjct: 906 ggtcaaagagctcacacctgataggcatttc 876
to top
>gb|AF078862.1|AF078862 Homo sapiens PTD009 mRNA, complete cds
          Length = 1222

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 277 ggtcaaagagctcacaccggatcggcatttc 307
           |||||||||||||||||| ||| ||||||||
Sbjct: 855 ggtcaaagagctcacacctgataggcatttc 825
to top
>gb|AF161520.1|AF161520 Homo sapiens HSPC172 mRNA, complete cds
          Length = 1002

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 277 ggtcaaagagctcacaccggatcggcatttc 307
           |||||||||||||||||| ||| ||||||||
Sbjct: 648 ggtcaaagagctcacacctgataggcatttc 618
to top
>gb|AF151862.1|AF151862 Homo sapiens CGI-104 protein mRNA, complete cds
          Length = 1192

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 277 ggtcaaagagctcacaccggatcggcatttc 307
           |||||||||||||||||| ||| ||||||||
Sbjct: 861 ggtcaaagagctcacacctgataggcatttc 831
to top
>gb|AF105025.1|AF105025 Homo sapiens unknown mRNA
          Length = 1216

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 277 ggtcaaagagctcacaccggatcggcatttc 307
           |||||||||||||||||| ||| ||||||||
Sbjct: 863 ggtcaaagagctcacacctgataggcatttc 833
to top
>gb|U41541.2| Caenorhabditis elegans cosmid C41A3, complete sequence
          Length = 39649

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 368   caggatttccatattttgagc 388
             |||||||||||||||||||||
Sbjct: 15413 caggatttccatattttgagc 15393
to top
>emb|AL590394.7| Human DNA sequence from clone RP11-435I7 on chromosome X Contains part
             of the gene for a novel protein (FLJ31204), complete
             sequence
          Length = 62195

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 479   agtacagccagtggtagggga 499
             |||||||||||||||||||||
Sbjct: 12140 agtacagccagtggtagggga 12120
to top
>ref|XM_969433.1| PREDICTED: Tribolium castaneum similar to CG9298-PA (LOC663382),
           mRNA
          Length = 654

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 273 ttgaggtcaaagagctcacaccggatcggcatttcca 309
           ||||||||||| ||||| ||||  |||||||||||||
Sbjct: 602 ttgaggtcaaacagctcgcaccttatcggcatttcca 566
to top
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012
          Length = 2668010

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 50     ctgtaacccagcgttgtatat 70
              |||||||||||||||||||||
Sbjct: 574910 ctgtaacccagcgttgtatat 574890
to top
>ref|NM_076522.1| Caenorhabditis elegans C41A3.1 (C41A3.1) mRNA, complete cds
          Length = 23490

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 368  caggatttccatattttgagc 388
            |||||||||||||||||||||
Sbjct: 5833 caggatttccatattttgagc 5813
to top
>gb|AC149888.2| Xenopus tropicalis clone ISB-149I7, complete sequence
          Length = 90925

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 199   gtgctccgtatgttcctttcatgct 223
             ||||||| |||||||||||||||||
Sbjct: 40267 gtgctccttatgttcctttcatgct 40243
to top
>gb|AC101924.24| Mus musculus chromosome 1, clone RP24-391B5, complete sequence
          Length = 161617

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 367    gcaggatttccatattttga 386
              ||||||||||||||||||||
Sbjct: 157467 gcaggatttccatattttga 157448
to top
>gb|AC103597.21| Mus musculus chromosome 18, clone RP23-435G4, complete sequence
          Length = 221083

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     tcaaagtctacacacattgt 35
              ||||||||||||||||||||
Sbjct: 118680 tcaaagtctacacacattgt 118661
to top
>gb|U80032.1| Caenorhabditis elegans cosmid C32E12, complete sequence
          Length = 45389

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 253   tctggatgacctgggctaggttga 276
             |||||||||||||| |||||||||
Sbjct: 39165 tctggatgacctggtctaggttga 39188
to top
>gb|AC113181.7| Mus musculus chromosome 5, clone RP23-359I6, complete sequence
          Length = 213684

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 29     acattgtctgtcttgggaatgctg 52
              |||| |||||||||||||||||||
Sbjct: 133863 acatagtctgtcttgggaatgctg 133886
to top
>gb|AC129187.4| Mus musculus BAC clone RP23-427D4 from chromosome 5, complete sequence
          Length = 198245

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    acattgtctgtcttgggaatgctg 52
             |||| |||||||||||||||||||
Sbjct: 34443 acatagtctgtcttgggaatgctg 34466
to top
>gb|AC124743.5| Mus musculus BAC clone RP23-219C1 from 1, complete sequence
          Length = 220167

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 367   gcaggatttccatattttga 386
             ||||||||||||||||||||
Sbjct: 87145 gcaggatttccatattttga 87126
to top
>gb|AC002487.1| Homo sapiens BAC clone CTA-369K23 from 7, complete sequence
          Length = 181588

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 106   tgttatgagccagaatcactttca 129
             |||| |||||||||||||||||||
Sbjct: 39526 tgttctgagccagaatcactttca 39549
to top
>emb|AL513302.15| Human DNA sequence from clone RP11-226L15 on chromosome 1 Contains a
             ribosomal protein L27a (RPL27A) pseudogene, the PIGM gene
             for class M phosphatidylinositol glycan, the 3' end of the
             KCNJ10 gene for potassium inwardly-rectifying channel
             subfamily J member 10 and a CpG island, complete sequence
          Length = 56937

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 494   aggggacagctgctgggaga 513
             ||||||||||||||||||||
Sbjct: 14225 aggggacagctgctgggaga 14206
to top
>gb|AC117465.13| Homo sapiens 3 BAC RP11-706D8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 195231

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 76     ttacagatatgaaagtctgt 95
              ||||||||||||||||||||
Sbjct: 150039 ttacagatatgaaagtctgt 150058
to top
>gb|AC153567.6| Mus musculus 10 BAC RP23-187C5 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 226945

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 418    tccctgtgagggattggaag 437
              ||||||||||||||||||||
Sbjct: 124645 tccctgtgagggattggaag 124664
to top
>gb|AC091841.3| Homo sapiens chromosome 5 clone CTD-2137D4, complete sequence
          Length = 67487

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   tctggatgacctgggctagg 272
             ||||||||||||||||||||
Sbjct: 41794 tctggatgacctgggctagg 41775
to top
>emb|CR859388.1| Pongo pygmaeus mRNA; cDNA DKFZp459H1242 (from clone DKFZp459H1242)
          Length = 1032

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 277 ggtcaaagagctcacaccggatcggcat 304
           |||||||||||||||||| ||| |||||
Sbjct: 647 ggtcaaagagctcacacctgatgggcat 620
to top
>emb|BX548248.9| Zebrafish DNA sequence from clone DKEY-245P14 in linkage group 1,
             complete sequence
          Length = 173643

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 322   ggttcttcaaaacaaactca 341
             ||||||||||||||||||||
Sbjct: 70170 ggttcttcaaaacaaactca 70151
to top
>gb|AC000100.2| Homo sapiens Chromosome 19 BAC Clone 959a10, complete sequence
          Length = 101912

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 343   tgtacagctcatatattgtt 362
             ||||||||||||||||||||
Sbjct: 55797 tgtacagctcatatattgtt 55816
to top
>gb|AC073649.3|AC073649 Homo sapiens clone RP11-823D8, complete sequence
          Length = 120951

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 343    tgtacagctcatatattgtt 362
              ||||||||||||||||||||
Sbjct: 113613 tgtacagctcatatattgtt 113632
to top
>gb|AC010682.3| Homo sapiens BAC clone RP11-251M8 from Y, complete sequence
          Length = 145383

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 343    tgtacagctcatatattgtt 362
              ||||||||||||||||||||
Sbjct: 110512 tgtacagctcatatattgtt 110493
to top
>gb|AC139777.3| Homo sapiens chromosome 5 clone RP11-1011D24, complete sequence
          Length = 169254

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   tctggatgacctgggctagg 272
             ||||||||||||||||||||
Sbjct: 56671 tctggatgacctgggctagg 56690
to top
>ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P3 and inverted repeat IR2
               (P1-P2-P3-IR2@) on chromosome Y
          Length = 4538292

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 343     tgtacagctcatatattgtt 362
               ||||||||||||||||||||
Sbjct: 3947309 tgtacagctcatatattgtt 3947290



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 343     tgtacagctcatatattgtt 362
               ||||||||||||||||||||
Sbjct: 2101025 tgtacagctcatatattgtt 2101044
to top
>dbj|BS000168.2| Pan troglodytes chromosome 22 clone:RP43-021P14, map 22, complete
             sequences
          Length = 184554

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   aaatacaaagatggtagaaa 173
             ||||||||||||||||||||
Sbjct: 16963 aaatacaaagatggtagaaa 16944
to top
>gb|AC007727.2|F8K7 Arabidopsis thaliana chromosome 1 BAC F8K7 sequence, complete sequence
          Length = 98581

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   gatggtagaaaaatacacac 182
             ||||||||||||||||||||
Sbjct: 69213 gatggtagaaaaatacacac 69232
to top
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 361     ttttcagcaggatttccata 380
               ||||||||||||||||||||
Sbjct: 3730304 ttttcagcaggatttccata 3730285
to top
>dbj|AP001982.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-344F5, complete
             sequence
          Length = 137996

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     tcaaactgagcaatgtcaaa 20
             ||||||||||||||||||||
Sbjct: 71640 tcaaactgagcaatgtcaaa 71621
to top
>emb|CT010499.9| Mouse DNA sequence from clone RP23-211K24 on chromosome 9, complete
             sequence
          Length = 212470

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   agccatagtccttgtagtat 599
             ||||||||||||||||||||
Sbjct: 21945 agccatagtccttgtagtat 21926


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,932,279
Number of Sequences: 3902068
Number of extensions: 4932279
Number of successful extensions: 87226
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87045
Number of HSP's gapped (non-prelim): 168
length of query: 600
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 577
effective length of database: 17,143,297,704
effective search space: 9891682775208
effective search space used: 9891682775208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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