ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence 266 2e-68
2gb|CP000237.1| Neorickettsia sennetsu strain Miyayama, complete ... 46 0.034
3ref|XM_644429.1| Entamoeba histolytica HM-1:IMSS exonuclease (29... 42 0.53
4gb|AC010016.6| Drosophila melanogaster 3L BAC RP98-10M10 (Roswel... 40 2.1
5gb|AC010558.4| Drosophila melanogaster 3L BAC RPCI98-1K9 (Roswel... 40 2.1
6dbj|AB084515.1| Candida parapsilosis cpr-c1 gene for conjugated ... 40 2.1
7gb|AE003548.3| Drosophila melanogaster chromosome 3L, section 37... 40 2.1
8gb|AC087833.3| Papio anubis clone RP41-78F4, complete sequence 38 8.3
9gb|DQ175301.1| Streptococcus pneumoniae isolate 95.1Ma00S topois... 38 8.3
10gb|DQ175300.1| Streptococcus pneumoniae isolate 95.1In00S topois... 38 8.3
11gb|DQ175299.1| Streptococcus pneumoniae isolate 95.1BR98S topois... 38 8.3
12gb|DQ175298.1| Streptococcus pneumoniae isolate 94.1Nd00S topois... 38 8.3
13gb|DQ175297.1| Streptococcus pneumoniae isolate 73.1Tx98S topois... 38 8.3
14gb|DQ175296.1| Streptococcus pneumoniae isolate 720.4CH00S topoi... 38 8.3
15gb|DQ175295.1| Streptococcus pneumoniae isolate 720.3CH00S topoi... 38 8.3
16gb|DQ175294.1| Streptococcus pneumoniae isolate 720.1CH00S topoi... 38 8.3
17gb|DQ175293.1| Streptococcus pneumoniae isolate 72.1In00S topois... 38 8.3
18gb|DQ175292.1| Streptococcus pneumoniae isolate 71.1SW99S topois... 38 8.3
19gb|DQ175291.1| Streptococcus pneumoniae isolate 700.1CH00S topoi... 38 8.3
20gb|DQ175290.1| Streptococcus pneumoniae isolate 687.1CH99S topoi... 38 8.3
21gb|DQ175289.1| Streptococcus pneumoniae isolate 68.1Wa00S topois... 38 8.3
22gb|DQ175288.1| Streptococcus pneumoniae isolate 68.1SW99S topois... 38 8.3
23gb|DQ175287.1| Streptococcus pneumoniae isolate 68.1PR00S topois... 38 8.3
24gb|DQ175286.1| Streptococcus pneumoniae isolate 68.1AT98S topois... 38 8.3
25gb|DQ175285.1| Streptococcus pneumoniae isolate 672.1US00S topoi... 38 8.3
26gb|DQ175284.1| Streptococcus pneumoniae isolate 67.1JA00S topois... 38 8.3
27gb|DQ175283.1| Streptococcus pneumoniae isolate 67.1FR92S topois... 38 8.3
28gb|DQ175282.1| Streptococcus pneumoniae isolate 638.3CH99S topoi... 38 8.3
29gb|DQ175281.1| Streptococcus pneumoniae isolate 638.2CH99S topoi... 38 8.3
30gb|DQ175280.1| Streptococcus pneumoniae isolate 636.1Ca99S topoi... 38 8.3
31gb|DQ175279.1| Streptococcus pneumoniae isolate 588.1JA99S topoi... 38 8.3
32gb|DQ175278.1| Streptococcus pneumoniae isolate 586.1CH99S topoi... 38 8.3
33gb|DQ175277.1| Streptococcus pneumoniae isolate 584.1Ca99S topoi... 38 8.3
34gb|DQ175276.1| Streptococcus pneumoniae isolate 582.1CH00S topoi... 38 8.3
35gb|DQ175275.1| Streptococcus pneumoniae isolate 581.1Ny99S topoi... 38 8.3
36gb|DQ175274.1| Streptococcus pneumoniae isolate 544.1Tx99S topoi... 38 8.3
37gb|DQ175273.1| Streptococcus pneumoniae isolate 543.1Ca99S topoi... 38 8.3
38gb|DQ175272.1| Streptococcus pneumoniae isolate 526.1Tx99S topoi... 38 8.3
39gb|DQ175271.1| Streptococcus pneumoniae isolate 524.1Ne00S topoi... 38 8.3
40gb|DQ175270.1| Streptococcus pneumoniae isolate 458.1JA00S topoi... 38 8.3
41gb|DQ175269.1| Streptococcus pneumoniae isolate 432.1JA00S topoi... 38 8.3
42gb|DQ175268.1| Streptococcus pneumoniae isolate 322.1JA98S topoi... 38 8.3
43gb|DQ175267.1| Streptococcus pneumoniae isolate 319.2JA99S topoi... 38 8.3
44gb|DQ175266.1| Streptococcus pneumoniae isolate 319.1JA99S topoi... 38 8.3
45gb|DQ175265.1| Streptococcus pneumoniae isolate 319.1JA00S topoi... 38 8.3
46gb|DQ175264.1| Streptococcus pneumoniae isolate 294.1JA99S topoi... 38 8.3
47gb|DQ175263.1| Streptococcus pneumoniae isolate 292.1AT96S topoi... 38 8.3
48gb|DQ175262.1| Streptococcus pneumoniae isolate 215.1Oh00S topoi... 38 8.3
49gb|DQ175261.1| Streptococcus pneumoniae isolate 136.1PL98S topoi... 38 8.3
50gb|DQ175260.1| Streptococcus pneumoniae isolate 132.1US00S topoi... 38 8.3
51gb|DQ175259.1| Streptococcus pneumoniae isolate 132.1NY98S topoi... 38 8.3
52gb|DQ175258.1| Streptococcus pneumoniae isolate 128.2Ca00S topoi... 38 8.3
53gb|DQ175257.1| Streptococcus pneumoniae isolate 0.7FR93S topoiso... 38 8.3
54gb|DQ175256.1| Streptococcus pneumoniae isolate 0.74Oh94S topois... 38 8.3
55gb|DQ175255.1| Streptococcus pneumoniae isolate 0.68Oh92S topois... 38 8.3
56gb|DQ175254.1| Streptococcus pneumoniae isolate 0.57SW99S topois... 38 8.3
57gb|DQ175253.1| Streptococcus pneumoniae isolate 0.49SP94S topois... 38 8.3
58gb|DQ175252.1| Streptococcus pneumoniae isolate 0.47SP00S topois... 38 8.3
59gb|DQ175251.1| Streptococcus pneumoniae isolate 0.45SL99S topois... 38 8.3
60gb|DQ175250.1| Streptococcus pneumoniae isolate 0.34PL96S topois... 38 8.3
61gb|DQ175249.1| Streptococcus pneumoniae isolate 0.31JA99S topois... 38 8.3
62gb|DQ175248.1| Streptococcus pneumoniae isolate 0.29JA98S topois... 38 8.3
63gb|DQ175247.1| Streptococcus pneumoniae isolate 0.19IS99S topois... 38 8.3
64gb|DQ175246.1| Streptococcus pneumoniae isolate 0.16GR98S topois... 38 8.3
65gb|DQ175245.1| Streptococcus pneumoniae isolate 0.15GR00S topois... 38 8.3
66gb|DQ175244.1| Streptococcus pneumoniae isolate 0.14GE00S topois... 38 8.3
67gb|AC109329.8| Homo sapiens chromosome 8, clone CTD-3107M8, comp... 38 8.3
68gb|AC123557.4| Mus musculus BAC clone RP23-183P22 from 1, comple... 38 8.3
69gb|AC119803.10| Mus musculus chromosome 6, clone RP23-124H21, co... 38 8.3
70gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete seq... 38 8.3
71emb|AL590731.12| Human DNA sequence from clone RP11-149M6 on chr... 38 8.3
72emb|Z83832.1|ASSGT Avena sativa mRNA for UDP-glucose:sterol gluc... 38 8.3
73emb|Z67739.2|SPPARCETP Streptococcus pneumoniae parC, parE and t... 38 8.3
74emb|X95717.1|SPPARECGN S.pneumoniae parE and parC genes 38 8.3
75gb|AC073531.22| Homo sapiens 12 BAC RP11-802J22 (Roswell Park Ca... 38 8.3
76dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl... 38 8.3
77gb|AE008451.1|AE008451 Streptococcus pneumoniae R6 section 67 of... 38 8.3
78gb|AC008282.4| Homo sapiens BAC clone RP11-516B14 from 2, comple... 38 8.3
79gb|AC022404.7|AC022404 Homo sapiens chromosome 14 clone CTD-2308... 38 8.3
80gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome 38 8.3
81gb|AC153853.4| Mus musculus BAC RP23-341J13 (Roswell Park Cance... 38 8.3 
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
          Length = 261265

 Score =  266 bits (134), Expect = 2e-68
 Identities = 145/149 (97%)
 Strand = Plus / Plus

                                                                          
Query: 1      agtttgtatctacatgcacaaagggcaagctcnaaaacactcgaaacaccaaatggtcta 60
              ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 135173 agtttgtatctacatgcacaaagtgcaagctccaaaacactcgaaacaccaaatggtcta 135232

                                                                          
Query: 61     caagacaataaggtccatgattacaggttggttggtccataaacgctagagagtcatcat 120
              ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 135233 caagacaataaggtccatgattacaggttggttggtccataaacgctggagagtcatcat 135292

                                           
Query: 121    gtccatgtgcatcaataagttgagtacct 149
              ||||||||||||||||| |||||||||||
Sbjct: 135293 gtccatgtgcatcaataggttgagtacct 135321



 Score =  266 bits (134), Expect = 2e-68
 Identities = 145/149 (97%)
 Strand = Plus / Plus

                                                                         
Query: 1     agtttgtatctacatgcacaaagggcaagctcnaaaacactcgaaacaccaaatggtcta 60
             ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 95460 agtttgtatctacatgcacaaagtgcaagctccaaaacactcgaaacaccaaatggtcta 95519

                                                                         
Query: 61    caagacaataaggtccatgattacaggttggttggtccataaacgctagagagtcatcat 120
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 95520 caagacaataaggtccatgattacaggttggttggtccataaacgctggagagtcatcat 95579

                                          
Query: 121   gtccatgtgcatcaataagttgagtacct 149
             ||||||||||||||||| |||||||||||
Sbjct: 95580 gtccatgtgcatcaataggttgagtacct 95608
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>gb|CP000237.1| Neorickettsia sennetsu strain Miyayama, complete genome
          Length = 859006

 Score = 46.1 bits (23), Expect = 0.034
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 131    atcaataagttgagtaccttttt 153
              |||||||||||||||||||||||
Sbjct: 814285 atcaataagttgagtaccttttt 814263
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>ref|XM_644429.1| Entamoeba histolytica HM-1:IMSS exonuclease (293.t00010)  partial
            mRNA
          Length = 1887

 Score = 42.1 bits (21), Expect = 0.53
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 110  agagtcatcatgtccatgtgcatcaataa 138
            |||| |||| |||||||||||||||||||
Sbjct: 1563 agagacatcttgtccatgtgcatcaataa 1535
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>gb|AC010016.6| Drosophila melanogaster 3L BAC RP98-10M10 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 174616

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    aaaacactcgaaacaccaaa 53
             ||||||||||||||||||||
Sbjct: 16972 aaaacactcgaaacaccaaa 16991
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>gb|AC010558.4| Drosophila melanogaster 3L BAC RPCI98-1K9 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 170356

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     aaaacactcgaaacaccaaa 53
              ||||||||||||||||||||
Sbjct: 135456 aaaacactcgaaacaccaaa 135475
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>dbj|AB084515.1| Candida parapsilosis cpr-c1 gene for conjugated polyketone
           reductase C1, complete cds
          Length = 1480

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 34  aaaacactcgaaacaccaaa 53
           ||||||||||||||||||||
Sbjct: 633 aaaacactcgaaacaccaaa 652
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>gb|AE003548.3| Drosophila melanogaster chromosome 3L, section 37 of 83 of the complete
              sequence
          Length = 244140

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     aaaacactcgaaacaccaaa 53
              ||||||||||||||||||||
Sbjct: 146741 aaaacactcgaaacaccaaa 146760
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>gb|AC087833.3| Papio anubis clone RP41-78F4, complete sequence
          Length = 154295

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 51    aaatggtctacaagacaat 69
             |||||||||||||||||||
Sbjct: 31944 aaatggtctacaagacaat 31926
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>gb|DQ175301.1| Streptococcus pneumoniae isolate 95.1Ma00S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175300.1| Streptococcus pneumoniae isolate 95.1In00S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175299.1| Streptococcus pneumoniae isolate 95.1BR98S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175298.1| Streptococcus pneumoniae isolate 94.1Nd00S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175297.1| Streptococcus pneumoniae isolate 73.1Tx98S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175296.1| Streptococcus pneumoniae isolate 720.4CH00S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175295.1| Streptococcus pneumoniae isolate 720.3CH00S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175294.1| Streptococcus pneumoniae isolate 720.1CH00S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175293.1| Streptococcus pneumoniae isolate 72.1In00S topoisomerase IV subunit B
            (parE) gene, partial cds
          Length = 1608

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175292.1| Streptococcus pneumoniae isolate 71.1SW99S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175291.1| Streptococcus pneumoniae isolate 700.1CH00S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175290.1| Streptococcus pneumoniae isolate 687.1CH99S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175289.1| Streptococcus pneumoniae isolate 68.1Wa00S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175288.1| Streptococcus pneumoniae isolate 68.1SW99S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175287.1| Streptococcus pneumoniae isolate 68.1PR00S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175286.1| Streptococcus pneumoniae isolate 68.1AT98S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175285.1| Streptococcus pneumoniae isolate 672.1US00S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175284.1| Streptococcus pneumoniae isolate 67.1JA00S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175283.1| Streptococcus pneumoniae isolate 67.1FR92S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175282.1| Streptococcus pneumoniae isolate 638.3CH99S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175281.1| Streptococcus pneumoniae isolate 638.2CH99S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175280.1| Streptococcus pneumoniae isolate 636.1Ca99S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175279.1| Streptococcus pneumoniae isolate 588.1JA99S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175278.1| Streptococcus pneumoniae isolate 586.1CH99S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175277.1| Streptococcus pneumoniae isolate 584.1Ca99S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175276.1| Streptococcus pneumoniae isolate 582.1CH00S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175275.1| Streptococcus pneumoniae isolate 581.1Ny99S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175274.1| Streptococcus pneumoniae isolate 544.1Tx99S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175273.1| Streptococcus pneumoniae isolate 543.1Ca99S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175272.1| Streptococcus pneumoniae isolate 526.1Tx99S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175271.1| Streptococcus pneumoniae isolate 524.1Ne00S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175270.1| Streptococcus pneumoniae isolate 458.1JA00S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175269.1| Streptococcus pneumoniae isolate 432.1JA00S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175268.1| Streptococcus pneumoniae isolate 322.1JA98S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175267.1| Streptococcus pneumoniae isolate 319.2JA99S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175266.1| Streptococcus pneumoniae isolate 319.1JA99S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175265.1| Streptococcus pneumoniae isolate 319.1JA00S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175264.1| Streptococcus pneumoniae isolate 294.1JA99S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175263.1| Streptococcus pneumoniae isolate 292.1AT96S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175262.1| Streptococcus pneumoniae isolate 215.1Oh00S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175261.1| Streptococcus pneumoniae isolate 136.1PL98S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175260.1| Streptococcus pneumoniae isolate 132.1US00S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175259.1| Streptococcus pneumoniae isolate 132.1NY98S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175258.1| Streptococcus pneumoniae isolate 128.2Ca00S topoisomerase IV subunit
            B (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175257.1| Streptococcus pneumoniae isolate 0.7FR93S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175256.1| Streptococcus pneumoniae isolate 0.74Oh94S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175255.1| Streptococcus pneumoniae isolate 0.68Oh92S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175254.1| Streptococcus pneumoniae isolate 0.57SW99S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
to top
>gb|DQ175253.1| Streptococcus pneumoniae isolate 0.49SP94S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
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>gb|DQ175252.1| Streptococcus pneumoniae isolate 0.47SP00S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
to top
>gb|DQ175251.1| Streptococcus pneumoniae isolate 0.45SL99S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
to top
>gb|DQ175250.1| Streptococcus pneumoniae isolate 0.34PL96S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
to top
>gb|DQ175249.1| Streptococcus pneumoniae isolate 0.31JA99S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
to top
>gb|DQ175248.1| Streptococcus pneumoniae isolate 0.29JA98S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
to top
>gb|DQ175247.1| Streptococcus pneumoniae isolate 0.19IS99S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
to top
>gb|DQ175246.1| Streptococcus pneumoniae isolate 0.16GR98S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
to top
>gb|DQ175245.1| Streptococcus pneumoniae isolate 0.15GR00S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
to top
>gb|DQ175244.1| Streptococcus pneumoniae isolate 0.14GE00S topoisomerase IV subunit B
            (parE) gene, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 1093 acctttttccttatggaaa 1111
to top
>gb|AC109329.8| Homo sapiens chromosome 8, clone CTD-3107M8, complete sequence
          Length = 215644

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 150    ttttccttatggaaatctt 168
              |||||||||||||||||||
Sbjct: 147689 ttttccttatggaaatctt 147707
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>gb|AC123557.4| Mus musculus BAC clone RP23-183P22 from 1, complete sequence
          Length = 198349

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 150    ttttccttatggaaatctt 168
              |||||||||||||||||||
Sbjct: 102292 ttttccttatggaaatctt 102274
to top
>gb|AC119803.10| Mus musculus chromosome 6, clone RP23-124H21, complete sequence
          Length = 197762

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 7      tatctacatgcacaaaggg 25
              |||||||||||||||||||
Sbjct: 139836 tatctacatgcacaaaggg 139854
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>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence
          Length = 3281944

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 152    ttccttatggaaatcttat 170
              |||||||||||||||||||
Sbjct: 800796 ttccttatggaaatcttat 800814
to top
>emb|AL590731.12| Human DNA sequence from clone RP11-149M6 on chromosome 6, complete
              sequence
          Length = 149389

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 151    tttccttatggaaatctta 169
              |||||||||||||||||||
Sbjct: 144527 tttccttatggaaatctta 144509
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>emb|Z83832.1|ASSGT Avena sativa mRNA for UDP-glucose:sterol glucosyltransferase
          Length = 2317

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 148 ctttttccttatggaaatcttat 170
           ||||||||||| |||||||||||
Sbjct: 456 ctttttccttacggaaatcttat 434
to top
>emb|Z67739.2|SPPARCETP Streptococcus pneumoniae parC, parE and transposase genes and ORF DNA
          Length = 6812

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 2347 acctttttccttatggaaa 2365
to top
>emb|X95717.1|SPPARECGN S.pneumoniae parE and parC genes
          Length = 3947

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 146 acctttttccttatggaaa 164
           |||||||||||||||||||
Sbjct: 817 acctttttccttatggaaa 835
to top
>gb|AC073531.22| Homo sapiens 12 BAC RP11-802J22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 212172

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 109    gagagtcatcatgtccatg 127
              |||||||||||||||||||
Sbjct: 191909 gagagtcatcatgtccatg 191927
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>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 152    ttccttatggaaatcttat 170
              |||||||||||||||||||
Sbjct: 340415 ttccttatggaaatcttat 340397
to top
>gb|AE008451.1|AE008451 Streptococcus pneumoniae R6 section 67 of 184 of the complete genome
          Length = 10828

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  acctttttccttatggaaa 164
            |||||||||||||||||||
Sbjct: 6992 acctttttccttatggaaa 7010
to top
>gb|AC008282.4| Homo sapiens BAC clone RP11-516B14 from 2, complete sequence
          Length = 203241

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 5     tgtatctacatgcacaaag 23
             |||||||||||||||||||
Sbjct: 83660 tgtatctacatgcacaaag 83678
to top
>gb|AC022404.7|AC022404 Homo sapiens chromosome 14 clone CTD-2308C24 and RP11-757H14 map 14q31,
              complete sequence
          Length = 232309

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 150    ttttccttatggaaatctt 168
              |||||||||||||||||||
Sbjct: 113870 ttttccttatggaaatctt 113888
to top
>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome
          Length = 2160842

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 146    acctttttccttatggaaa 164
              |||||||||||||||||||
Sbjct: 799429 acctttttccttatggaaa 799447
to top
>gb|AC153853.4| Mus musculus  BAC RP23-341J13 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 194037

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 7     tatctacatgcacaaaggg 25
             |||||||||||||||||||
Sbjct: 77145 tatctacatgcacaaaggg 77127


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,249,852
Number of Sequences: 3902068
Number of extensions: 1249852
Number of successful extensions: 76930
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76782
Number of HSP's gapped (non-prelim): 148
length of query: 170
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 148
effective length of database: 17,147,199,772
effective search space: 2537785566256
effective search space used: 2537785566256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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