>YHJ6_YEAST (P38770) Hypothetical 53.4 kDa protein in SLT2-PUT2 intergenic|
           region
          Length = 471

 Score = 33.9 bits (76), Expect = 0.34
 Identities = 24/105 (22%), Positives = 51/105 (48%), Gaps = 24/105 (22%)
 Frame = -2

Query: 563 DMLQPHLSVEIRSAVDPS--------RIESVVPVPPSYHVE----VRNLPEGKHFV---- 432
           +++ PH S  I++ + P+        ++E VVP+PPS + +      N  EG+  +    
Sbjct: 136 NIVSPHRSTVIKALLSPTDLGVAAATKVEGVVPLPPSANQDDNESSNNNAEGEDIIRNEE 195

Query: 431 ---QLRSGLPSH-----TNIFESELVEVDLEEQPQIHVGPLKYKT 321
              +++S L +H      N F+SE+++ +L  + +     + + T
Sbjct: 196 VEDEIKSSLGNHKSSQYANAFDSEIIKRELRSRSKYQPIQVSFNT 240

>GIL1_ENTHI (P32022) Galactose-inhibitable lectin 170 kDa subunit|
          Length = 1276

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
 Frame = -1

Query: 294 DPSPSFTSYCWSFCCYSRDQYAKVEGLVPERC---RNDFPKFRKHTEQKGTTEDNI 136
           D  PS   YCWS+ C     + K +    E C    N+  ++   +EQ+ +  D +
Sbjct: 485 DQKPSSDGYCWSYTCDQTTGFCKKDKRGKEMCTGKTNNCQEYVCDSEQRCSVRDKV 540

>YCF2_MARPO (P09975) Protein ycf2|
          Length = 2136

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = +2

Query: 65   LTYSTCKFNFPRLIRIICFRLSFSILSSV-VPFCSVCFLNLG 187
            LTY+  K NF R+ +I+ +++  +I+ ++ +   S+  LN+G
Sbjct: 1623 LTYTNNKLNFDRIFKIVIYKVGKTIIQNILIKSSSMNLLNIG 1664

>PUB2_SCHPO (Q9UTG2) E3 ubiquitin--protein ligase pub2 (EC 6.3.2.-)|
          Length = 671

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 11/42 (26%), Positives = 26/42 (61%)
 Frame = -1

Query: 234 YAKVEGLVPERCRNDFPKFRKHTEQKGTTEDNIEKESLKHMI 109
           + K+E L P++ +  F +F  + + K + + N+E + +KH++
Sbjct: 183 HEKLENLTPKQLKEVFSQFLFNNQSKSSLKINLEYKVIKHLL 224

>ULA1_SCHPO (Q9UT93) NEDD8-activating enzyme E1 regulatory subunit|
           (Ubiquitin-like activation protein 1)
           (Ubiquitin-activating enzyme E1-like 1)
          Length = 500

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = -1

Query: 246 SRDQYAKVEGLVPERCRNDFPKFRKHTEQK----GTTEDNIEKESLKHMILIRRGKLNLQ 79
           S  QY K++ +  E+  ND  KF+K+ +Q       + + I    +KH     R  LN++
Sbjct: 322 STQQYVKLQVIYKEKSENDILKFKKYVQQTLKRLNRSVEEITDLEIKH---FSRNCLNIK 378

Query: 78  V 76
           V
Sbjct: 379 V 379


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,020,768
Number of Sequences: 219361
Number of extensions: 1366779
Number of successful extensions: 3457
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3456
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4815021120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)