Clone Name | rbasd26f17 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_189191.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3582 Score = 293 bits (148), Expect = 3e-76 Identities = 328/388 (84%) Strand = Plus / Minus Query: 178 gaacttagggaagtcattcctacagcgctctggtacaagtccttcaaccttggcatactg 237 |||| ||||| ||||||||| ||||| || ||||||||||| || | ||||||||| ||| Sbjct: 3524 gaacctagggtagtcattcccacagcactttggtacaagtcttttagccttggcatgctg 3465 Query: 238 atcacgactgtaacaacagaaactccaacaataagaggtaaaactggggctggggtcagt 297 || || | || || || |||||||| ||||||||||| || || |||||||| || | | Sbjct: 3464 atgaccaatgcaatcacggaaactccgacaataagaggaaatacaggggctggagttaat 3405 Query: 298 tcctgtttgtgatgccgctcttcagttttatatttaagaggaccaacatgaatctgaggt 357 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3404 tcctgtttgtgatgtcgctcttcggttttatatttaagaggaccaacatgaatctgaggt 3345 Query: 358 tgctcttctaggtcaacttcaaccaactccgattcaaatatattggtatgtgatggaagg 417 |||| || | |||||||||||| | ||| || |||||| ||| ||||||||||||||| Sbjct: 3344 tgcttgtccaagtcaacttcaactatctctgactcaaatctatgggtatgtgatggaaga 3285 Query: 418 ccagaccgaagctgaacaaaatgctttccttcgggtaaatttcttacttcaacgtggtag 477 ||||| ||||||||||||| ||||||||||| || ||||| |||||| | || ||| Sbjct: 3284 ccagaacgaagctgaacaagatgctttccttttggcaaattctgtacttcgaagtagtac 3225 Query: 478 gaaggaggaacaggaaccacagattctattctagaagggtcaacagctgatctaatttca 537 || |||||||||| | ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 3224 gagagaggaacagggagtacagattctattctagaagggtctgcagctgatctaatttca 3165 Query: 538 acagataaatgtggctgcaacatatcaa 565 ||||| | ||||| |||||||| |||| Sbjct: 3164 acagacagttgtggttgcaacatgtcaa 3137
>dbj|AK058273.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B11, full insert sequence Length = 1629 Score = 293 bits (148), Expect = 3e-76 Identities = 328/388 (84%) Strand = Plus / Minus Query: 178 gaacttagggaagtcattcctacagcgctctggtacaagtccttcaaccttggcatactg 237 |||| ||||| ||||||||| ||||| || ||||||||||| || | ||||||||| ||| Sbjct: 1183 gaacctagggtagtcattcccacagcactttggtacaagtcttttagccttggcatgctg 1124 Query: 238 atcacgactgtaacaacagaaactccaacaataagaggtaaaactggggctggggtcagt 297 || || | || || || |||||||| ||||||||||| || || |||||||| || | | Sbjct: 1123 atgaccaatgcaatcacggaaactccgacaataagaggaaatacaggggctggagttaat 1064 Query: 298 tcctgtttgtgatgccgctcttcagttttatatttaagaggaccaacatgaatctgaggt 357 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1063 tcctgtttgtgatgtcgctcttcggttttatatttaagaggaccaacatgaatctgaggt 1004 Query: 358 tgctcttctaggtcaacttcaaccaactccgattcaaatatattggtatgtgatggaagg 417 |||| || | |||||||||||| | ||| || |||||| ||| ||||||||||||||| Sbjct: 1003 tgcttgtccaagtcaacttcaactatctctgactcaaatctatgggtatgtgatggaaga 944 Query: 418 ccagaccgaagctgaacaaaatgctttccttcgggtaaatttcttacttcaacgtggtag 477 ||||| ||||||||||||| ||||||||||| || ||||| |||||| | || ||| Sbjct: 943 ccagaacgaagctgaacaagatgctttccttttggcaaattctgtacttcgaagtagtac 884 Query: 478 gaaggaggaacaggaaccacagattctattctagaagggtcaacagctgatctaatttca 537 || |||||||||| | ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 883 gagagaggaacagggagtacagattctattctagaagggtctgcagctgatctaatttca 824 Query: 538 acagataaatgtggctgcaacatatcaa 565 ||||| | ||||| |||||||| |||| Sbjct: 823 acagacagttgtggttgcaacatgtcaa 796
>gb|BT018899.1| Zea mays clone EL01T0207E03.d mRNA sequence Length = 1585 Score = 287 bits (145), Expect = 2e-74 Identities = 373/449 (83%) Strand = Plus / Minus Query: 125 ctctctttctcaatattgtcttccgtggttcctttctgctcggtgtgtttcctgaactta 184 |||||||||| ||||| |||| ||||| |||||| || |||||| | ||||||| | Sbjct: 1389 ctctctttcttaatatattcttgcgtggctcctttttggtcggtgccatccctgaaccca 1330 Query: 185 gggaagtcattcctacagcgctctggtacaagtccttcaaccttggcatactgatcacga 244 | |||||||| ||||||||||||||||| ||||| || |||||||||||||||||||| | Sbjct: 1329 gagaagtcatccctacagcgctctggtataagtcatttaaccttggcatactgatcacca 1270 Query: 245 ctgtaacaacagaaactccaacaataagaggtaaaactggggctggggtcagttcctgtt 304 || ||| |||||||||||||||||||| || |||||||| ||||||||||||||||| | Sbjct: 1269 gtgcaaccacagaaactccaacaataagcggaaaaactggtgctggggtcagttcctgct 1210 Query: 305 tgtgatgccgctcttcagttttatatttaagaggaccaacatgaatctgaggttgctctt 364 | ||||| ||||| |||||||||||||| || ||||||||||| || || || | || || Sbjct: 1209 tttgatgacgctcctcagttttatatttgaggggaccaacatggatttggggatcctttt 1150 Query: 365 ctaggtcaacttcaaccaactccgattcaaatatattggtatgtgatggaaggccagacc 424 | || || ||||| || |||||||||||||| ||| |||||||||||||||||||| | Sbjct: 1149 ccagatctacttcgactaactccgattcaaacctatgtgtatgtgatggaaggccagatc 1090 Query: 425 gaagctgaacaaaatgctttccttcgggtaaatttcttacttcaacgtggtaggaaggag 484 |||||||||||| |||||| || | ||| |||| || ||||||| || ||| ||| ||| Sbjct: 1089 gaagctgaacaagatgcttgcccttgggcaaatctcggacttcaaagtagtatgaaagag 1030 Query: 485 gaacaggaaccacagattctattctagaagggtcaacagctgatctaatttcaacagata 544 ||| ||||| |||| ||||| |||||||| ||| |||||||| ||||||||||| | Sbjct: 1029 gaagaggaagtacagcttctactctagaagagtctgttgctgatctgatttcaacagaga 970 Query: 545 aatgtggctgcaacatatcaatgccatct 573 ||| || || ||| |||||||||||||| Sbjct: 969 gatgcggatgtaacgtatcaatgccatct 941
>gb|AY105873.1| Zea mays PCO094136 mRNA sequence Length = 809 Score = 287 bits (145), Expect = 2e-74 Identities = 373/449 (83%) Strand = Plus / Minus Query: 125 ctctctttctcaatattgtcttccgtggttcctttctgctcggtgtgtttcctgaactta 184 |||||||||| ||||| |||| ||||| |||||| || |||||| | ||||||| | Sbjct: 575 ctctctttcttaatatattcttgcgtggctcctttttggtcggtgccatccctgaaccca 516 Query: 185 gggaagtcattcctacagcgctctggtacaagtccttcaaccttggcatactgatcacga 244 | |||||||| ||||||||||||||||| ||||| || |||||||||||||||||||| | Sbjct: 515 gagaagtcatccctacagcgctctggtataagtcatttaaccttggcatactgatcacca 456 Query: 245 ctgtaacaacagaaactccaacaataagaggtaaaactggggctggggtcagttcctgtt 304 || ||| |||||||||||||||||||| || |||||||| ||||||||||||||||| | Sbjct: 455 gtgcaaccacagaaactccaacaataagcggaaaaactggtgctggggtcagttcctgct 396 Query: 305 tgtgatgccgctcttcagttttatatttaagaggaccaacatgaatctgaggttgctctt 364 | ||||| ||||| |||||||||||||| || ||||||||||| || || || | || || Sbjct: 395 tttgatgacgctcctcagttttatatttgaggggaccaacatggatttggggatcctttt 336 Query: 365 ctaggtcaacttcaaccaactccgattcaaatatattggtatgtgatggaaggccagacc 424 | || || ||||| || |||||||||||||| ||| |||||||||||||||||||| | Sbjct: 335 ccagatctacttcgactaactccgattcaaacctatgtgtatgtgatggaaggccagatc 276 Query: 425 gaagctgaacaaaatgctttccttcgggtaaatttcttacttcaacgtggtaggaaggag 484 |||||||||||| |||||| || | ||| |||| || ||||||| || ||| ||| ||| Sbjct: 275 gaagctgaacaagatgcttgcccttgggcaaatctcggacttcaaagtagtatgaaagag 216 Query: 485 gaacaggaaccacagattctattctagaagggtcaacagctgatctaatttcaacagata 544 ||| ||||| |||| ||||| |||||||| ||| |||||||| ||||||||||| | Sbjct: 215 gaagaggaagtacagcttctactctagaagagtctgttgctgatctgatttcaacagaga 156 Query: 545 aatgtggctgcaacatatcaatgccatct 573 ||| || || ||| |||||||||||||| Sbjct: 155 gatgcggatgtaacgtatcaatgccatct 127
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 236 bits (119), Expect = 7e-59 Identities = 230/267 (86%) Strand = Plus / Plus Query: 299 cctgtttgtgatgccgctcttcagttttatatttaagaggaccaacatgaatctgaggtt 358 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 11024477 cctgtttgtgatgtcgctcttcggttttatatttaagaggaccaacatgaatctgaggtt 11024536 Query: 359 gctcttctaggtcaacttcaaccaactccgattcaaatatattggtatgtgatggaaggc 418 ||| || | |||||||||||| | ||| || |||||| ||| ||||||||||||||| | Sbjct: 11024537 gcttgtccaagtcaacttcaactatctctgactcaaatctatgggtatgtgatggaagac 11024596 Query: 419 cagaccgaagctgaacaaaatgctttccttcgggtaaatttcttacttcaacgtggtagg 478 |||| ||||||||||||| ||||||||||| || ||||| |||||| | || ||| | Sbjct: 11024597 cagaacgaagctgaacaagatgctttccttttggcaaattctgtacttcgaagtagtacg 11024656 Query: 479 aaggaggaacaggaaccacagattctattctagaagggtcaacagctgatctaatttcaa 538 | |||||||||| | ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 11024657 agagaggaacagggagtacagattctattctagaagggtctgcagctgatctaatttcaa 11024716 Query: 539 cagataaatgtggctgcaacatatcaa 565 |||| | ||||| |||||||| |||| Sbjct: 11024717 cagacagttgtggttgcaacatgtcaa 11024743 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 178 gaacttagggaagtcattcctacagcgctctggtacaagtc 218 |||| ||||| ||||||||| ||||| || ||||||||||| Sbjct: 11023970 gaacctagggtagtcattcccacagcactttggtacaagtc 11024010 Score = 40.1 bits (20), Expect = 7.8 Identities = 56/68 (82%) Strand = Plus / Plus Query: 223 aaccttggcatactgatcacgactgtaacaacagaaactccaacaataagaggtaaaact 282 ||||||||||| ||||| || | || || || |||||||| ||||||||||| || || Sbjct: 11024109 aaccttggcatgctgatgaccaatgcaatcacggaaactccgacaataagaggaaataca 11024168 Query: 283 ggggctgg 290 |||||||| Sbjct: 11024169 ggggctgg 11024176
>dbj|AP003578.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0682B08 Length = 138376 Score = 236 bits (119), Expect = 7e-59 Identities = 230/267 (86%) Strand = Plus / Plus Query: 299 cctgtttgtgatgccgctcttcagttttatatttaagaggaccaacatgaatctgaggtt 358 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 53359 cctgtttgtgatgtcgctcttcggttttatatttaagaggaccaacatgaatctgaggtt 53418 Query: 359 gctcttctaggtcaacttcaaccaactccgattcaaatatattggtatgtgatggaaggc 418 ||| || | |||||||||||| | ||| || |||||| ||| ||||||||||||||| | Sbjct: 53419 gcttgtccaagtcaacttcaactatctctgactcaaatctatgggtatgtgatggaagac 53478 Query: 419 cagaccgaagctgaacaaaatgctttccttcgggtaaatttcttacttcaacgtggtagg 478 |||| ||||||||||||| ||||||||||| || ||||| |||||| | || ||| | Sbjct: 53479 cagaacgaagctgaacaagatgctttccttttggcaaattctgtacttcgaagtagtacg 53538 Query: 479 aaggaggaacaggaaccacagattctattctagaagggtcaacagctgatctaatttcaa 538 | |||||||||| | ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 53539 agagaggaacagggagtacagattctattctagaagggtctgcagctgatctaatttcaa 53598 Query: 539 cagataaatgtggctgcaacatatcaa 565 |||| | ||||| |||||||| |||| Sbjct: 53599 cagacagttgtggttgcaacatgtcaa 53625 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 178 gaacttagggaagtcattcctacagcgctctggtacaagtc 218 |||| ||||| ||||||||| ||||| || ||||||||||| Sbjct: 52852 gaacctagggtagtcattcccacagcactttggtacaagtc 52892 Score = 40.1 bits (20), Expect = 7.8 Identities = 56/68 (82%) Strand = Plus / Plus Query: 223 aaccttggcatactgatcacgactgtaacaacagaaactccaacaataagaggtaaaact 282 ||||||||||| ||||| || | || || || |||||||| ||||||||||| || || Sbjct: 52991 aaccttggcatgctgatgaccaatgcaatcacggaaactccgacaataagaggaaataca 53050 Query: 283 ggggctgg 290 |||||||| Sbjct: 53051 ggggctgg 53058
>dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0487H02 Length = 145491 Score = 236 bits (119), Expect = 7e-59 Identities = 230/267 (86%) Strand = Plus / Plus Query: 299 cctgtttgtgatgccgctcttcagttttatatttaagaggaccaacatgaatctgaggtt 358 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 127319 cctgtttgtgatgtcgctcttcggttttatatttaagaggaccaacatgaatctgaggtt 127378 Query: 359 gctcttctaggtcaacttcaaccaactccgattcaaatatattggtatgtgatggaaggc 418 ||| || | |||||||||||| | ||| || |||||| ||| ||||||||||||||| | Sbjct: 127379 gcttgtccaagtcaacttcaactatctctgactcaaatctatgggtatgtgatggaagac 127438 Query: 419 cagaccgaagctgaacaaaatgctttccttcgggtaaatttcttacttcaacgtggtagg 478 |||| ||||||||||||| ||||||||||| || ||||| |||||| | || ||| | Sbjct: 127439 cagaacgaagctgaacaagatgctttccttttggcaaattctgtacttcgaagtagtacg 127498 Query: 479 aaggaggaacaggaaccacagattctattctagaagggtcaacagctgatctaatttcaa 538 | |||||||||| | ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 127499 agagaggaacagggagtacagattctattctagaagggtctgcagctgatctaatttcaa 127558 Query: 539 cagataaatgtggctgcaacatatcaa 565 |||| | ||||| |||||||| |||| Sbjct: 127559 cagacagttgtggttgcaacatgtcaa 127585 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 178 gaacttagggaagtcattcctacagcgctctggtacaagtc 218 |||| ||||| ||||||||| ||||| || ||||||||||| Sbjct: 126812 gaacctagggtagtcattcccacagcactttggtacaagtc 126852 Score = 40.1 bits (20), Expect = 7.8 Identities = 56/68 (82%) Strand = Plus / Plus Query: 223 aaccttggcatactgatcacgactgtaacaacagaaactccaacaataagaggtaaaact 282 ||||||||||| ||||| || | || || || |||||||| ||||||||||| || || Sbjct: 126951 aaccttggcatgctgatgaccaatgcaatcacggaaactccgacaataagaggaaataca 127010 Query: 283 ggggctgg 290 |||||||| Sbjct: 127011 ggggctgg 127018
>gb|U92838.1|MMSALH06 Mus musculus sialoadhesin gene, exons 8, 9, and 10 Length = 1772 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 ctgctcggtgtgtttcctgaa 180 ||||||||||||||||||||| Sbjct: 22 ctgctcggtgtgtttcctgaa 42
>gb|AC121959.3| Mus musculus BAC clone RP24-247N18 from chromosome 3, complete sequence Length = 187416 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 248 taacaacagaaactccaacaa 268 ||||||||||||||||||||| Sbjct: 153736 taacaacagaaactccaacaa 153756
>emb|AL035409.15|HS564M11 Human DNA sequence from clone RP4-564M11 on chromosome 1p31.1 Contains the 3' end of the SIAT7E gene for sialyltransferase 7 ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1, 3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase) E, a novel gene and 3' end of the PIGK gene for phosphatidylinositol glycan class K, complete sequence Length = 138783 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 546 atgtggctgcaacatatcaat 566 ||||||||||||||||||||| Sbjct: 79068 atgtggctgcaacatatcaat 79088
>gb|AC096725.3| Homo sapiens BAC clone RP11-25L5 from 4, complete sequence Length = 182627 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 448 tcgggtaaatttcttacttca 468 ||||||||||||||||||||| Sbjct: 148052 tcgggtaaatttcttacttca 148072
>gb|AC164560.3| Mus musculus BAC clone RP23-192D6 from chromosome 3, complete sequence Length = 200505 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 taacaacagaaactccaacaa 268 ||||||||||||||||||||| Sbjct: 170731 taacaacagaaactccaacaa 170711
>emb|AL831736.15| Mouse DNA sequence from clone RP23-32L15 on chromosome 2, complete sequence Length = 126358 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 ctgctcggtgtgtttcctgaa 180 ||||||||||||||||||||| Sbjct: 11160 ctgctcggtgtgtttcctgaa 11140
>ref|XM_642090.1| Dictyostelium discoideum SNF2-related domain-containing protein (DDB0220518), partial mRNA Length = 9210 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 244 actgtaacaacagaaactccaaca 267 ||||||||||||| |||||||||| Sbjct: 8839 actgtaacaacagtaactccaaca 8862
>gb|AC125444.9| Mus musculus chromosome 1, clone RP24-499L20, complete sequence Length = 162238 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 ctttctcaatattgtcttcc 148 |||||||||||||||||||| Sbjct: 12002 ctttctcaatattgtcttcc 11983
>gb|AC138214.8| Mus musculus chromosome 1, clone RP23-404A6, complete sequence Length = 203478 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 ctttctcaatattgtcttcc 148 |||||||||||||||||||| Sbjct: 195772 ctttctcaatattgtcttcc 195753
>gb|AC137123.7| Mus musculus chromosome 15, clone RP23-401L15, complete sequence Length = 232054 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 tctgaggttgctcttctaggtcaa 373 |||| ||||||||||||||||||| Sbjct: 75421 tctgtggttgctcttctaggtcaa 75398
>gb|AC157983.16| Medicago truncatula clone mth2-130n5, complete sequence Length = 114996 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 atatttaagaggaccaacatgaat 350 ||||||||||||||||| |||||| Sbjct: 34798 atatttaagaggaccaaaatgaat 34821
>emb|AL158091.31| Human DNA sequence from clone RP5-824A14 on chromosome 20 Contains the 5' end of the BTBD4 gene for BTB (POZ) domain containing 4, part of a gene for a tissue plasminogen activator protein and two CpG islands, complete sequence Length = 41932 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 cctttctgctcggtgtgttt 174 |||||||||||||||||||| Sbjct: 12460 cctttctgctcggtgtgttt 12441
>emb|BX890581.13| Zebrafish DNA sequence from clone CH211-222O19 in linkage group 21, complete sequence Length = 205143 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 gtgatgccgctcttcagttt 325 |||||||||||||||||||| Sbjct: 50891 gtgatgccgctcttcagttt 50910
>emb|AJ606381.1| Staphylococcus aureus partial spa gene for protein A, strain M3 Length = 936 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 gaagctgaacaaaatgcttt 444 |||||||||||||||||||| Sbjct: 13 gaagctgaacaaaatgcttt 32
>emb|CR354427.7| Zebrafish DNA sequence from clone DKEY-263N17 in linkage group 18, complete sequence Length = 164758 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tgtttcaggctctctttctc 135 |||||||||||||||||||| Sbjct: 128434 tgtttcaggctctctttctc 128415
>gb|AC094099.3| Homo sapiens chromosome 5 clone RP11-153B10, complete sequence Length = 68440 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 tatgtttcaggctctctttc 133 |||||||||||||||||||| Sbjct: 64829 tatgtttcaggctctctttc 64810
>ref|XM_684436.1| PREDICTED: Danio rerio similar to apoptosis-inducing factor like isoform 1 (LOC561033), partial mRNA Length = 1355 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 gtgatgccgctcttcagttt 325 |||||||||||||||||||| Sbjct: 848 gtgatgccgctcttcagttt 829
>ref|XM_680044.1| PREDICTED: Danio rerio similar to apoptosis-inducing factor like isoform 2 (LOC557064), mRNA Length = 1822 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 gtgatgccgctcttcagttt 325 |||||||||||||||||||| Sbjct: 917 gtgatgccgctcttcagttt 898
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence Length = 190469 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 gtcagttcctgtttgtgatg 311 |||||||||||||||||||| Sbjct: 106996 gtcagttcctgtttgtgatg 106977
>gb|AC093528.3| Homo sapiens chromosome 5 clone RP11-297K24, complete sequence Length = 198167 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 tatgtttcaggctctctttc 133 |||||||||||||||||||| Sbjct: 2684 tatgtttcaggctctctttc 2665
>emb|AL929193.19| Zebrafish DNA sequence from clone CH211-274P24 in linkage group 20, complete sequence Length = 159094 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 gtgatgccgctcttcagttt 325 |||||||||||||||||||| Sbjct: 136435 gtgatgccgctcttcagttt 136416
>emb|CR450838.5| Zebrafish DNA sequence from clone DKEY-283N16 in linkage group 18, complete sequence Length = 145250 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tgtttcaggctctctttctc 135 |||||||||||||||||||| Sbjct: 91226 tgtttcaggctctctttctc 91207
>gb|AC005245.1|AC005245 Homo sapiens chromosome 17, clone hRPK.642_C_21, complete sequence Length = 172084 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 cagttttatatttaagagga 339 |||||||||||||||||||| Sbjct: 26662 cagttttatatttaagagga 26643 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,977,000 Number of Sequences: 3902068 Number of extensions: 5977000 Number of successful extensions: 103837 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 30 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103725 Number of HSP's gapped (non-prelim): 103 length of query: 573 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 550 effective length of database: 17,143,297,704 effective search space: 9428813737200 effective search space used: 9428813737200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)