ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd26f10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X04133.1|HVUBIQR Barley mRNA for ubiquitin polyprecursor fragment Length = 703 Score = 482 bits (243), Expect = e-133 Identities = 334/369 (90%), Gaps = 2/369 (0%) Strand = Plus / Minus Query: 1 gacatgctncaacctttggtgagancaccgacnacacaagacctgtganccctgngacag 60 |||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||| ||||| Sbjct: 598 gacatgctccaacctttggtgagaacaccgacaacacaagacctgtgaaccctgagacag 539 Query: 61 aagcaacgtnatgaccaggcncttacttgccaccacgcaggctangcaccaggtgaaggg 120 ||||||||| |||||||||| ||||||||||||||||||||| | ||||||||||||||| Sbjct: 538 aagcaacgtcatgaccaggcacttacttgccaccacgcaggcgaagcaccaggtgaaggg 479 Query: 121 tagactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccgg 180 |||||| |||||||||||||| ||||| ||||||||||||| ||||||||||||||||| Sbjct: 478 tagactccttctggatgttgtagtctgccagagtgcggccatcctcgagctgcttgccgg 419 Query: 181 cgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttga 240 |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 418 cgaaaatgaggcgctgctggtccggagggatgccctccttgtcctggatcttcgccttga 359 Query: 241 cgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttc 300 |||||||||||||| ||||||||| ||||| |||||||||||||||||| || |||| || Sbjct: 358 cgttgtcgatggtgtcagaggactccacctccagtgtgatggtcttgccggtgaggg-tc 300 Query: 301 ttgacnaanatctncataccaccacanaaggcggagcaccaggtggagggtngactcctt 360 || || || |||| ||| || |||| ||| | ||||||||||||||| || |||||||| Sbjct: 299 ttcacgaaaatctgcatgcctccac-gaagcctgagcaccaggtggagagtggactcctt 241 Query: 361 ntggatgtt 369 |||||||| Sbjct: 240 ctggatgtt 232 Score = 299 bits (151), Expect = 3e-78 Identities = 235/265 (88%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| || || |||| |||||||||||| | ||| | || |||||||||| || Sbjct: 265 gcaccaggtggagagtggactccttctggatgttatagtcagccagggtgcggccatcct 206 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||| || || ||||||||||||||||||||||||||||||| ||||| || Sbjct: 205 cgagctgcttgccagcaaagatgaggcgctgctggtccggagggatgccctccttgtcct 146 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||| Sbjct: 145 ggatcttcgccttgacgttgtcgatggtgtcagaggactccacctccagtgtgatggtct 86 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||||||||||| |||| || || |||| ||| ||||||| |||||||||||||||||| Sbjct: 85 tgcccgtcaggg-tcttcacgaagatctgcatgccaccac-gaaggcggagcaccaggtg 28 Query: 346 gagggtngactccttntggatgttg 370 ||||| |||||||| ||||||||| Sbjct: 27 aagggtggactccttctggatgttg 3 Score = 63.9 bits (32), Expect = 3e-07 Identities = 48/54 (88%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgt 141 |||||||||| |||| |||||||||||||||| |||| |||||||||||||| Sbjct: 55 tgccaccacgaaggcggagcaccaggtgaagggtggactccttctggatgttgt 2 Score = 56.0 bits (28), Expect = 8e-05 Identities = 38/42 (90%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||| ||||||||||| ||||| |||||||| ||||||||| Sbjct: 500 aggcgaagcaccaggtgaagggtagactccttctggatgttg 459
>gb|AF093505.1|AF093505 Saccharum hybrid cultivar H32-8560 polyubiquitin (ubi9) gene, complete cds Length = 5174 Score = 278 bits (140), Expect = 1e-71 Identities = 250/289 (86%), Gaps = 2/289 (0%) Strand = Plus / Minus Query: 82 cttacttgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgt 141 |||||| ||||||||| || | |||||||||| || || |||| |||||||||||||| Sbjct: 4835 cttactggccaccacggagacggagcaccaggtggagagtggactccttctggatgttgt 4776 Query: 142 ngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggt 201 ||||| || |||||||||| ||| ||||||||||||||||| ||||| |||||||||| Sbjct: 4775 agtctgccagggtgcggccatcctccagctgcttgccggcgaagatgagacgctgctggt 4716 Query: 202 ccggagggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagagg 261 |||| |||||||||| ||||| ||||||||||||||| || |||||||||||| |||||| Sbjct: 4715 ccggggggatgccctccttgtcctggatcttcgccttcacattgtcgatggtgtcagagg 4656 Query: 262 actncaccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncatacca 321 ||| ||||| ||| |||||||||||||| || |||| ||||||| || |||| ||||||| Sbjct: 4655 actccacctccagggtgatggtcttgccggtgaggg-tcttgacgaaratctgcatacca 4597 Query: 322 ccacanaaggcggagcaccaggtggagggtngactccttntggatgttg 370 || | |||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 4596 ccgc-gaaggcggagcaccaggtgaagggtggactccttctggatgttg 4549 Score = 246 bits (124), Expect = 4e-62 Identities = 227/265 (85%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||||||||| |||| |||||||||||||| |||| || |||||||||| || Sbjct: 4583 gcaccaggtgaagggtggactccttctggatgttgtantctgccagggtgcggccatcct 4524 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| || || || | |||||||||||||| |||||||||| ||| | || Sbjct: 4523 caagctgcttgccagcaaagataaracgctgctggtccggggggatgccctccttatcct 4464 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||||||||| || ||||| |||||| ||||||||| ||||| ||| |||||||||| Sbjct: 4463 ggatcttcgccttcacattgtcaatggtgtcagaggactccacctccagggtgatggtct 4404 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| || |||| ||||||| || |||| ||||||||||| |||||||||||||||||| Sbjct: 4403 tgccggtgaggg-tcttgacgaaaatctgcataccaccac-gaaggcggagcaccaggtg 4346 Query: 346 gagggtngactccttntggatgttg 370 ||||| ||||| || ||||||||| Sbjct: 4345 aagggtggactcyttctggatgttg 4321 Score = 212 bits (107), Expect = 6e-52 Identities = 234/281 (83%), Gaps = 2/281 (0%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| |||| |||||||||||||||| |||| ||||||||||||| || | Sbjct: 4371 ccaccacgaaggcggagcaccaggtgaagggtggactcyttctggatgttgtantccgca 4312 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || |||||||||| ||| || |||||||||||||| ||||| |||||||||||||| ||| Sbjct: 4311 agggtgcggccatcctcaagytgcttgccggcgaaratgagacgctgctggtccgggggg 4252 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| ||||||||||||||| || ||||| |||||| | ||||||| |||| Sbjct: 4251 atgccctccttgtcctggatcttcgccttcacattgtcaatggtgtccgaggactccacc 4192 Query: 270 ttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaa 329 | || |||||||||||||| || |||| ||||||| || |||| ||| ||||| | | Sbjct: 4191 tccaaggtgatggtcttgccagtgaggg-tcttgacgaagatctgcatgccacc-cctga 4134 Query: 330 ggcggagcaccaggtggagggtngactccttntggatgttg 370 | | |||||| |||||||| || |||||||| ||||||||| Sbjct: 4133 gcctgagcacaaggtggagagtcgactccttctggatgttg 4093 Score = 192 bits (97), Expect = 6e-46 Identities = 221/265 (83%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| || || |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 4127 gcacaaggtggagagtcgactccttctggatgttgtagtcagcgagggtgcggccatcct 4068 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||| |||||||||| |||||||||||||| ||||| |||| ||||| || Sbjct: 4067 cgagctgcttgccagcgaaaatgaracgctgctggtccggggggattccctccttgtcct 4008 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| ||||||||||| ||| |||| |||| |||| || ||||| |||| Sbjct: 4007 ggatcttggccttcacgttgtcgatcgtgtcagaagactcgacctcaagcgtgatagtct 3948 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| || |||| ||||||| || |||| ||| || || | ||| | |||||||||||| Sbjct: 3947 tgccagtgaggg-tcttgacgaaaatctgcatgcctcc-cctaagcctgagcaccaggtg 3890 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||||| ||||||||| Sbjct: 3889 gagggtggactccttctggatgttg 3865 Score = 125 bits (63), Expect = 1e-25 Identities = 158/193 (81%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| |||||||||||||| ||| | || || ||||||| || Sbjct: 3899 gcaccaggtggagggtggactccttctggatgttgtagtcagctagggtacggccatcct 3840 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||| || || || || | |||||| || ||||| ||||| | ||||| || Sbjct: 3839 cgagctgcttgccagcaaaratcagcctctgctgatctggaggaatgccttccttgtcct 3780 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| || ||| | ||||||| |||| || |||||||||| Sbjct: 3779 ggatcttagccttgacattgtcaatagtgtctgaggactcaacctcaagggtgatggtct 3720 Query: 286 tgcccgtcagggt 298 |||| || ||||| Sbjct: 3719 tgccagtgagggt 3707
>ref|XM_506723.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ9003_G05.28 mRNA Length = 1642 Score = 270 bits (136), Expect = 3e-69 Identities = 243/281 (86%), Gaps = 2/281 (0%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| || | | |||||||||| |||||||||| |||||||||||||| ||| | Sbjct: 1221 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtcggcg 1162 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || |||||||||| ||||||||||||||||||||| ||||| ||||||||||| || ||| Sbjct: 1161 agggtgcggccatcctcgagctgcttgccggcgaagatgagacgctgctggtctgggggg 1102 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| ||||||||| ||||||||||||||||||||| | ||| || ||| Sbjct: 1101 atgccctccttgtcctggatcttggccttgacgttgtcgatggtgtccgagctctcaacc 1042 Query: 270 ttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaa 329 | ||| |||||||||||||| || |||| ||||||| || |||| ||||||||||| || Sbjct: 1041 tccagggtgatggtcttgcctgtgaggg-tcttgacaaagatctgcataccaccac-gaa 984 Query: 330 ggcggagcaccaggtggagggtngactccttntggatgttg 370 |||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 983 ggcggagcacaaggtggagggtggactccttctggatgttg 943 Score = 194 bits (98), Expect = 1e-46 Identities = 218/260 (83%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 |||||||| || |||| |||||||||||||| ||| | || || | ||| | ||| ||| Sbjct: 744 aggtgaagcgttgactccttctggatgttgtagtcagcaagggtcctgccgtcctcaagc 685 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||||||||| || ||||| |||||||||||||| || ||||||| ||||| ||||||| Sbjct: 684 tgcttgccggcaaagatgagacgctgctggtccgggggaatgccctccttgtcctggatc 625 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||||||||||||||||||| |||| || | ||||| || |||||||||||||| Sbjct: 624 ttggccttgacgttgtcgatggtgtcagaagattccacctcgagggtgatggtcttgccg 565 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 ||||| | ||||||| || |||| ||| ||||||| |||||||| || |||||||||| Sbjct: 564 gtcagtg-tcttgacaaagatctgcatgccaccac-ggaggcggaggacaaggtggaggg 507 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 506 tggactccttctggatgttg 487 Score = 194 bits (98), Expect = 1e-46 Identities = 218/260 (83%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||||| ||| | || || | ||||| ||| ||| Sbjct: 516 aggtggagggtggactccttctggatgttgtagtcagcaagggtcctgccatcctccagc 457 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||||||||| ||||| ||||||||||| || |||||||||| |||| ||||||| Sbjct: 456 tgcttgccggcgaagatgagacgctgctggtctggggggatgccctctttgtcctggatc 397 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||||||||||||||||||| |||| |||| ||||| || ||||| |||||||| Sbjct: 396 ttggccttgacgttgtcgatggtgtcagaagactccacctcaagggtgatagtcttgccg 337 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 ||||| | ||||||| || |||| ||| ||||||| |||||||| || ||||| |||| Sbjct: 336 gtcagag-tcttgacaaagatctgcatgccaccac-ggaggcggaggacaaggtgaaggg 279 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 278 tcgactccttctggatgttg 259 Score = 157 bits (79), Expect = 3e-35 Identities = 172/206 (83%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| |||| |||| ||||| ||||| |||| |||||||||||||| ||| | Sbjct: 993 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtcagca 934 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || || | ||||| ||| ||||||||||| || || |||||||||||||||||||| || Sbjct: 933 agggtcctgccatcctccagctgcttgccagcaaagatgaggcgctgctggtccggggga 874 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| ||||||||| |||||||| ||||||||||| |||| |||| |||| Sbjct: 873 atgccctccttgtcctggatcttggccttgacattgtcgatggtatcagaagactccacc 814 Query: 270 ttcagtgtgatggtcttgcccgtcag 295 | || |||||||||||||| ||||| Sbjct: 813 tcgagggtgatggtcttgccggtcag 788 Score = 151 bits (76), Expect = 2e-33 Identities = 155/184 (84%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||||||||| |||| |||||||||||||| ||| | || || | ||||| ||| ||| Sbjct: 288 aggtgaagggtcgactccttctggatgttgtagtcagcaagggtcctgccatcctccagc 229 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| ||||| ||||| |||||||||||||| |||||||||| ||| | |||||| Sbjct: 228 tgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttatcttggatc 169 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || |||||||| || ||||||||| ||||||||| ||||| || ||||| |||||||| Sbjct: 168 ttagccttgacattatcgatggtgtcagaggactccacctcgagggtgatagtcttgccg 109 Query: 291 gtca 294 |||| Sbjct: 108 gtca 105 Score = 143 bits (72), Expect = 5e-31 Identities = 227/281 (80%), Gaps = 2/281 (0%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| |||| |||||||||| ||||| |||| |||||||||||||| ||| | Sbjct: 1449 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 1390 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || ||||| |||| ||| ||||||||||| ||||| || || ||||||||||| || || Sbjct: 1389 agggtgcgtccatcctccagctgcttgccagcgaagatcagacgctgctggtctggggga 1330 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 || |||| ||||| ||||||||| ||||| || || || |||||| | ||| || ||| Sbjct: 1329 atcccctccttgtcctggatcttggccttcacattatcaatggtgtcggagctctcaacc 1270 Query: 270 ttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaa 329 | || ||||||||||| || |||| || |||| || || |||| ||||||||||| | Sbjct: 1269 tccaaagtgatggtcttcccagtcaagg-tcttcacgaagatctgcataccaccac-gga 1212 Query: 330 ggcggagcaccaggtggagggtngactccttntggatgttg 370 | || ||||||||||||||||| |||||||| ||||||||| Sbjct: 1211 gacgaagcaccaggtggagggtagactccttctggatgttg 1171
>ref|XM_464194.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1640 Score = 270 bits (136), Expect = 3e-69 Identities = 243/281 (86%), Gaps = 2/281 (0%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| || | | |||||||||| |||||||||| |||||||||||||| ||| | Sbjct: 1218 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtcggcg 1159 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || |||||||||| ||||||||||||||||||||| ||||| ||||||||||| || ||| Sbjct: 1158 agggtgcggccatcctcgagctgcttgccggcgaagatgagacgctgctggtctgggggg 1099 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| ||||||||| ||||||||||||||||||||| | ||| || ||| Sbjct: 1098 atgccctccttgtcctggatcttggccttgacgttgtcgatggtgtccgagctctcaacc 1039 Query: 270 ttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaa 329 | ||| |||||||||||||| || |||| ||||||| || |||| ||||||||||| || Sbjct: 1038 tccagggtgatggtcttgcctgtgaggg-tcttgacaaagatctgcataccaccac-gaa 981 Query: 330 ggcggagcaccaggtggagggtngactccttntggatgttg 370 |||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 980 ggcggagcacaaggtggagggtggactccttctggatgttg 940 Score = 194 bits (98), Expect = 1e-46 Identities = 218/260 (83%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 |||||||| || |||| |||||||||||||| ||| | || || | ||| | ||| ||| Sbjct: 741 aggtgaagcgttgactccttctggatgttgtagtcagcaagggtcctgccgtcctcaagc 682 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||||||||| || ||||| |||||||||||||| || ||||||| ||||| ||||||| Sbjct: 681 tgcttgccggcaaagatgagacgctgctggtccgggggaatgccctccttgtcctggatc 622 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||||||||||||||||||| |||| || | ||||| || |||||||||||||| Sbjct: 621 ttggccttgacgttgtcgatggtgtcagaagattccacctcgagggtgatggtcttgccg 562 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 ||||| | ||||||| || |||| ||| ||||||| |||||||| || |||||||||| Sbjct: 561 gtcagtg-tcttgacaaagatctgcatgccaccac-ggaggcggaggacaaggtggaggg 504 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 503 tggactccttctggatgttg 484 Score = 194 bits (98), Expect = 1e-46 Identities = 218/260 (83%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||||| ||| | || || | ||||| ||| ||| Sbjct: 513 aggtggagggtggactccttctggatgttgtagtcagcaagggtcctgccatcctccagc 454 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||||||||| ||||| ||||||||||| || |||||||||| |||| ||||||| Sbjct: 453 tgcttgccggcgaagatgagacgctgctggtctggggggatgccctctttgtcctggatc 394 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||||||||||||||||||| |||| |||| ||||| || ||||| |||||||| Sbjct: 393 ttggccttgacgttgtcgatggtgtcagaagactccacctcaagggtgatagtcttgccg 334 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 ||||| | ||||||| || |||| ||| ||||||| |||||||| || ||||| |||| Sbjct: 333 gtcagag-tcttgacaaagatctgcatgccaccac-ggaggcggaggacaaggtgaaggg 276 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 275 tcgactccttctggatgttg 256 Score = 157 bits (79), Expect = 3e-35 Identities = 172/206 (83%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| |||| |||| ||||| ||||| |||| |||||||||||||| ||| | Sbjct: 990 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtcagca 931 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || || | ||||| ||| ||||||||||| || || |||||||||||||||||||| || Sbjct: 930 agggtcctgccatcctccagctgcttgccagcaaagatgaggcgctgctggtccggggga 871 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| ||||||||| |||||||| ||||||||||| |||| |||| |||| Sbjct: 870 atgccctccttgtcctggatcttggccttgacattgtcgatggtatcagaagactccacc 811 Query: 270 ttcagtgtgatggtcttgcccgtcag 295 | || |||||||||||||| ||||| Sbjct: 810 tcgagggtgatggtcttgccggtcag 785 Score = 151 bits (76), Expect = 2e-33 Identities = 155/184 (84%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||||||||| |||| |||||||||||||| ||| | || || | ||||| ||| ||| Sbjct: 285 aggtgaagggtcgactccttctggatgttgtagtcagcaagggtcctgccatcctccagc 226 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| ||||| ||||| |||||||||||||| |||||||||| ||| | |||||| Sbjct: 225 tgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttatcttggatc 166 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || |||||||| || ||||||||| ||||||||| ||||| || ||||| |||||||| Sbjct: 165 ttagccttgacattatcgatggtgtcagaggactccacctcgagggtgatagtcttgccg 106 Query: 291 gtca 294 |||| Sbjct: 105 gtca 102 Score = 143 bits (72), Expect = 5e-31 Identities = 227/281 (80%), Gaps = 2/281 (0%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| |||| |||||||||| ||||| |||| |||||||||||||| ||| | Sbjct: 1446 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 1387 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || ||||| |||| ||| ||||||||||| ||||| || || ||||||||||| || || Sbjct: 1386 agggtgcgtccatcctccagctgcttgccagcgaagatcagacgctgctggtctggggga 1327 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 || |||| ||||| ||||||||| ||||| || || || |||||| | ||| || ||| Sbjct: 1326 atcccctccttgtcctggatcttggccttcacattatcaatggtgtcggagctctcaacc 1267 Query: 270 ttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaa 329 | || ||||||||||| || |||| || |||| || || |||| ||||||||||| | Sbjct: 1266 tccaaagtgatggtcttcccagtcaagg-tcttcacgaagatctgcataccaccac-gga 1209 Query: 330 ggcggagcaccaggtggagggtngactccttntggatgttg 370 | || ||||||||||||||||| |||||||| ||||||||| Sbjct: 1208 gacgaagcaccaggtggagggtagactccttctggatgttg 1168
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 270 bits (136), Expect = 3e-69 Identities = 243/281 (86%), Gaps = 2/281 (0%) Strand = Plus / Plus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| || | | |||||||||| |||||||||| |||||||||||||| ||| | Sbjct: 3340877 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtcggcg 3340936 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || |||||||||| ||||||||||||||||||||| ||||| ||||||||||| || ||| Sbjct: 3340937 agggtgcggccatcctcgagctgcttgccggcgaagatgagacgctgctggtctgggggg 3340996 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| ||||||||| ||||||||||||||||||||| | ||| || ||| Sbjct: 3340997 atgccctccttgtcctggatcttggccttgacgttgtcgatggtgtccgagctctcaacc 3341056 Query: 270 ttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaa 329 | ||| |||||||||||||| || |||| ||||||| || |||| ||||||||||| || Sbjct: 3341057 tccagggtgatggtcttgcctgtgaggg-tcttgacaaagatctgcataccaccac-gaa 3341114 Query: 330 ggcggagcaccaggtggagggtngactccttntggatgttg 370 |||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 3341115 ggcggagcacaaggtggagggtggactccttctggatgttg 3341155 Score = 194 bits (98), Expect = 1e-46 Identities = 218/260 (83%), Gaps = 2/260 (0%) Strand = Plus / Plus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||||| ||| | || || | ||||| ||| ||| Sbjct: 3341582 aggtggagggtggactccttctggatgttgtagtcagcaagggtcctgccatcctccagc 3341641 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||||||||| ||||| ||||||||||| || |||||||||| |||| ||||||| Sbjct: 3341642 tgcttgccggcgaagatgagacgctgctggtctggggggatgccctctttgtcctggatc 3341701 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||||||||||||||||||| |||| |||| ||||| || ||||| |||||||| Sbjct: 3341702 ttggccttgacgttgtcgatggtgtcagaagactccacctcaagggtgatagtcttgccg 3341761 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 ||||| | ||||||| || |||| ||| ||||||| |||||||| || ||||| |||| Sbjct: 3341762 gtcagag-tcttgacaaagatctgcatgccaccac-ggaggcggaggacaaggtgaaggg 3341819 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 3341820 tcgactccttctggatgttg 3341839 Score = 194 bits (98), Expect = 1e-46 Identities = 218/260 (83%), Gaps = 2/260 (0%) Strand = Plus / Plus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 |||||||| || |||| |||||||||||||| ||| | || || | ||| | ||| ||| Sbjct: 3341354 aggtgaagcgttgactccttctggatgttgtagtcagcaagggtcctgccgtcctcaagc 3341413 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||||||||| || ||||| |||||||||||||| || ||||||| ||||| ||||||| Sbjct: 3341414 tgcttgccggcaaagatgagacgctgctggtccgggggaatgccctccttgtcctggatc 3341473 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||||||||||||||||||| |||| || | ||||| || |||||||||||||| Sbjct: 3341474 ttggccttgacgttgtcgatggtgtcagaagattccacctcgagggtgatggtcttgccg 3341533 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 ||||| | ||||||| || |||| ||| ||||||| |||||||| || |||||||||| Sbjct: 3341534 gtcagtg-tcttgacaaagatctgcatgccaccac-ggaggcggaggacaaggtggaggg 3341591 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 3341592 tggactccttctggatgttg 3341611 Score = 157 bits (79), Expect = 3e-35 Identities = 172/206 (83%) Strand = Plus / Plus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| |||| |||| ||||| ||||| |||| |||||||||||||| ||| | Sbjct: 3341105 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtcagca 3341164 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || || | ||||| ||| ||||||||||| || || |||||||||||||||||||| || Sbjct: 3341165 agggtcctgccatcctccagctgcttgccagcaaagatgaggcgctgctggtccggggga 3341224 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| ||||||||| |||||||| ||||||||||| |||| |||| |||| Sbjct: 3341225 atgccctccttgtcctggatcttggccttgacattgtcgatggtatcagaagactccacc 3341284 Query: 270 ttcagtgtgatggtcttgcccgtcag 295 | || |||||||||||||| ||||| Sbjct: 3341285 tcgagggtgatggtcttgccggtcag 3341310 Score = 151 bits (76), Expect = 2e-33 Identities = 155/184 (84%) Strand = Plus / Plus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||||||||| |||| |||||||||||||| ||| | || || | ||||| ||| ||| Sbjct: 3341810 aggtgaagggtcgactccttctggatgttgtagtcagcaagggtcctgccatcctccagc 3341869 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| ||||| ||||| |||||||||||||| |||||||||| ||| | |||||| Sbjct: 3341870 tgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttatcttggatc 3341929 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || |||||||| || ||||||||| ||||||||| ||||| || ||||| |||||||| Sbjct: 3341930 ttagccttgacattatcgatggtgtcagaggactccacctcgagggtgatagtcttgccg 3341989 Query: 291 gtca 294 |||| Sbjct: 3341990 gtca 3341993 Score = 143 bits (72), Expect = 5e-31 Identities = 227/281 (80%), Gaps = 2/281 (0%) Strand = Plus / Plus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| |||| |||||||||| ||||| |||| |||||||||||||| ||| | Sbjct: 3340649 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 3340708 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || ||||| |||| ||| ||||||||||| ||||| || || ||||||||||| || || Sbjct: 3340709 agggtgcgtccatcctccagctgcttgccagcgaagatcagacgctgctggtctggggga 3340768 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 || |||| ||||| ||||||||| ||||| || || || |||||| | ||| || ||| Sbjct: 3340769 atcccctccttgtcctggatcttggccttcacattatcaatggtgtcggagctctcaacc 3340828 Query: 270 ttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaa 329 | || ||||||||||| || |||| || |||| || || |||| ||||||||||| | Sbjct: 3340829 tccaaagtgatggtcttcccagtcaagg-tcttcacgaagatctgcataccaccac-gga 3340886 Query: 330 ggcggagcaccaggtggagggtngactccttntggatgttg 370 | || ||||||||||||||||| |||||||| ||||||||| Sbjct: 3340887 gacgaagcaccaggtggagggtagactccttctggatgttg 3340927
>gb|AF184280.1|AF184280 Oryza sativa polyubiquitin (RUBQ2) gene, complete cds Length = 4442 Score = 270 bits (136), Expect = 3e-69 Identities = 243/281 (86%), Gaps = 2/281 (0%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| || | | |||||||||| |||||||||| |||||||||||||| ||| | Sbjct: 3924 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtcggca 3865 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || |||||||||| ||||||||||||||||||||| ||||| ||||||||||| || ||| Sbjct: 3864 agggtgcggccatcctcgagctgcttgccggcgaagatgagacgctgctggtctgggggg 3805 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| ||||||||| ||||||||||||||||||||| | ||| || ||| Sbjct: 3804 atgccctccttgtcctggatcttggccttgacgttgtcgatggtgtccgagctctcaacc 3745 Query: 270 ttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaa 329 | ||| |||||||||||||| || |||| ||||||| || |||| ||||||||||| || Sbjct: 3744 tccagggtgatggtcttgcctgtgaggg-tcttgacaaagatctgcataccaccac-gaa 3687 Query: 330 ggcggagcaccaggtggagggtngactccttntggatgttg 370 |||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 3686 ggcggagcacaaggtggagggtggactccttctggatgttg 3646 Score = 194 bits (98), Expect = 1e-46 Identities = 218/260 (83%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 |||||||| || |||| |||||||||||||| ||| | || || | ||| | ||| ||| Sbjct: 3447 aggtgaagcgttgactccttctggatgttgtagtcagcaagggtcctgccgtcctcaagc 3388 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||||||||| || ||||| |||||||||||||| || ||||||| ||||| ||||||| Sbjct: 3387 tgcttgccggcaaagatgagacgctgctggtccgggggaatgccctccttgtcctggatc 3328 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||||||||||||||||||| |||| || | ||||| || |||||||||||||| Sbjct: 3327 ttggccttgacgttgtcgatggtgtcagaagattccacctcgagggtgatggtcttgccg 3268 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 ||||| | ||||||| || |||| ||| ||||||| |||||||| || |||||||||| Sbjct: 3267 gtcagtg-tcttgacaaagatctgcatgccaccac-ggaggcggaggacaaggtggaggg 3210 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 3209 tggactccttctggatgttg 3190 Score = 194 bits (98), Expect = 1e-46 Identities = 218/260 (83%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||||| ||| | || || | ||||| ||| ||| Sbjct: 3219 aggtggagggtggactccttctggatgttgtagtcagcaagggtcctgccatcctccagc 3160 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||||||||| ||||| ||||||||||| || |||||||||| |||| ||||||| Sbjct: 3159 tgcttgccggcgaagatgagacgctgctggtctggggggatgccctctttgtcctggatc 3100 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||||||||||||||||||| |||| |||| ||||| || ||||| |||||||| Sbjct: 3099 ttggccttgacgttgtcgatggtgtcagaagactccacctcaagggtgatagtcttgccg 3040 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 ||||| | ||||||| || |||| ||| ||||||| |||||||| || ||||| |||| Sbjct: 3039 gtcagag-tcttgacaaagatctgcatgccaccac-ggaggcggaggacaaggtgaaggg 2982 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 2981 tcgactccttctggatgttg 2962 Score = 157 bits (79), Expect = 3e-35 Identities = 172/206 (83%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| |||| |||| ||||| ||||| |||| |||||||||||||| ||| | Sbjct: 3696 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtcagca 3637 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || || | ||||| ||| ||||||||||| || || |||||||||||||||||||| || Sbjct: 3636 agggtcctgccatcctccagctgcttgccagcaaagatgaggcgctgctggtccggggga 3577 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| ||||||||| |||||||| ||||||||||| |||| |||| |||| Sbjct: 3576 atgccctccttgtcctggatcttggccttgacattgtcgatggtatcagaagactccacc 3517 Query: 270 ttcagtgtgatggtcttgcccgtcag 295 | || |||||||||||||| ||||| Sbjct: 3516 tcgagggtgatggtcttgccggtcag 3491 Score = 151 bits (76), Expect = 2e-33 Identities = 155/184 (84%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||||||||| |||| |||||||||||||| ||| | || || | ||||| ||| ||| Sbjct: 2991 aggtgaagggtcgactccttctggatgttgtagtcagcaagggtcctgccatcctccagc 2932 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| ||||| ||||| |||||||||||||| |||||||||| ||| | |||||| Sbjct: 2931 tgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttatcttggatc 2872 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || |||||||| || ||||||||| ||||||||| ||||| || ||||| |||||||| Sbjct: 2871 ttagccttgacattatcgatggtgtcagaggactccacctcgagggtgatagtcttgccg 2812 Query: 291 gtca 294 |||| Sbjct: 2811 gtca 2808 Score = 143 bits (72), Expect = 5e-31 Identities = 227/281 (80%), Gaps = 2/281 (0%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| |||| |||||||||| ||||| |||| |||||||||||||| ||| | Sbjct: 4152 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 4093 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || ||||| |||| ||| ||||||||||| ||||| || || ||||||||||| || || Sbjct: 4092 agggtgcgtccatcctccagctgcttgccagcgaagatcagacgctgctggtctggggga 4033 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 || |||| ||||| ||||||||| ||||| || || || |||||| | ||| || ||| Sbjct: 4032 atcccctccttgtcctggatcttggccttcacattatcaatggtgtcggagctctcaacc 3973 Query: 270 ttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaa 329 | || ||||||||||| || |||| || |||| || || |||| ||||||||||| | Sbjct: 3972 tccaaagtgatggtcttcccagtcaagg-tcttcacgaagatctgcataccaccac-gga 3915 Query: 330 ggcggagcaccaggtggagggtngactccttntggatgttg 370 | || ||||||||||||||||| |||||||| ||||||||| Sbjct: 3914 gacgaagcaccaggtggagggtagactccttctggatgttg 3874
>dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ9003_G05 Length = 141860 Score = 270 bits (136), Expect = 3e-69 Identities = 243/281 (86%), Gaps = 2/281 (0%) Strand = Plus / Plus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| || | | |||||||||| |||||||||| |||||||||||||| ||| | Sbjct: 89737 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtcggcg 89796 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || |||||||||| ||||||||||||||||||||| ||||| ||||||||||| || ||| Sbjct: 89797 agggtgcggccatcctcgagctgcttgccggcgaagatgagacgctgctggtctgggggg 89856 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| ||||||||| ||||||||||||||||||||| | ||| || ||| Sbjct: 89857 atgccctccttgtcctggatcttggccttgacgttgtcgatggtgtccgagctctcaacc 89916 Query: 270 ttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaa 329 | ||| |||||||||||||| || |||| ||||||| || |||| ||||||||||| || Sbjct: 89917 tccagggtgatggtcttgcctgtgaggg-tcttgacaaagatctgcataccaccac-gaa 89974 Query: 330 ggcggagcaccaggtggagggtngactccttntggatgttg 370 |||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 89975 ggcggagcacaaggtggagggtggactccttctggatgttg 90015 Score = 194 bits (98), Expect = 1e-46 Identities = 218/260 (83%), Gaps = 2/260 (0%) Strand = Plus / Plus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||||| ||| | || || | ||||| ||| ||| Sbjct: 90442 aggtggagggtggactccttctggatgttgtagtcagcaagggtcctgccatcctccagc 90501 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||||||||| ||||| ||||||||||| || |||||||||| |||| ||||||| Sbjct: 90502 tgcttgccggcgaagatgagacgctgctggtctggggggatgccctctttgtcctggatc 90561 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||||||||||||||||||| |||| |||| ||||| || ||||| |||||||| Sbjct: 90562 ttggccttgacgttgtcgatggtgtcagaagactccacctcaagggtgatagtcttgccg 90621 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 ||||| | ||||||| || |||| ||| ||||||| |||||||| || ||||| |||| Sbjct: 90622 gtcagag-tcttgacaaagatctgcatgccaccac-ggaggcggaggacaaggtgaaggg 90679 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 90680 tcgactccttctggatgttg 90699 Score = 194 bits (98), Expect = 1e-46 Identities = 218/260 (83%), Gaps = 2/260 (0%) Strand = Plus / Plus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 |||||||| || |||| |||||||||||||| ||| | || || | ||| | ||| ||| Sbjct: 90214 aggtgaagcgttgactccttctggatgttgtagtcagcaagggtcctgccgtcctcaagc 90273 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||||||||| || ||||| |||||||||||||| || ||||||| ||||| ||||||| Sbjct: 90274 tgcttgccggcaaagatgagacgctgctggtccgggggaatgccctccttgtcctggatc 90333 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||||||||||||||||||| |||| || | ||||| || |||||||||||||| Sbjct: 90334 ttggccttgacgttgtcgatggtgtcagaagattccacctcgagggtgatggtcttgccg 90393 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 ||||| | ||||||| || |||| ||| ||||||| |||||||| || |||||||||| Sbjct: 90394 gtcagtg-tcttgacaaagatctgcatgccaccac-ggaggcggaggacaaggtggaggg 90451 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 90452 tggactccttctggatgttg 90471 Score = 157 bits (79), Expect = 3e-35 Identities = 172/206 (83%) Strand = Plus / Plus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| |||| |||| ||||| ||||| |||| |||||||||||||| ||| | Sbjct: 89965 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtcagca 90024 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || || | ||||| ||| ||||||||||| || || |||||||||||||||||||| || Sbjct: 90025 agggtcctgccatcctccagctgcttgccagcaaagatgaggcgctgctggtccggggga 90084 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| ||||||||| |||||||| ||||||||||| |||| |||| |||| Sbjct: 90085 atgccctccttgtcctggatcttggccttgacattgtcgatggtatcagaagactccacc 90144 Query: 270 ttcagtgtgatggtcttgcccgtcag 295 | || |||||||||||||| ||||| Sbjct: 90145 tcgagggtgatggtcttgccggtcag 90170 Score = 151 bits (76), Expect = 2e-33 Identities = 155/184 (84%) Strand = Plus / Plus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||||||||| |||| |||||||||||||| ||| | || || | ||||| ||| ||| Sbjct: 90670 aggtgaagggtcgactccttctggatgttgtagtcagcaagggtcctgccatcctccagc 90729 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| ||||| ||||| |||||||||||||| |||||||||| ||| | |||||| Sbjct: 90730 tgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttatcttggatc 90789 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || |||||||| || ||||||||| ||||||||| ||||| || ||||| |||||||| Sbjct: 90790 ttagccttgacattatcgatggtgtcagaggactccacctcgagggtgatagtcttgccg 90849 Query: 291 gtca 294 |||| Sbjct: 90850 gtca 90853 Score = 143 bits (72), Expect = 5e-31 Identities = 227/281 (80%), Gaps = 2/281 (0%) Strand = Plus / Plus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| |||| |||||||||| ||||| |||| |||||||||||||| ||| | Sbjct: 89509 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 89568 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || ||||| |||| ||| ||||||||||| ||||| || || ||||||||||| || || Sbjct: 89569 agggtgcgtccatcctccagctgcttgccagcgaagatcagacgctgctggtctggggga 89628 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 || |||| ||||| ||||||||| ||||| || || || |||||| | ||| || ||| Sbjct: 89629 atcccctccttgtcctggatcttggccttcacattatcaatggtgtcggagctctcaacc 89688 Query: 270 ttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaa 329 | || ||||||||||| || |||| || |||| || || |||| ||||||||||| | Sbjct: 89689 tccaaagtgatggtcttcccagtcaagg-tcttcacgaagatctgcataccaccac-gga 89746 Query: 330 ggcggagcaccaggtggagggtngactccttntggatgttg 370 | || ||||||||||||||||| |||||||| ||||||||| Sbjct: 89747 gacgaagcaccaggtggagggtagactccttctggatgttg 89787
>dbj|AK101547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048M20, full insert sequence Length = 1642 Score = 270 bits (136), Expect = 3e-69 Identities = 243/281 (86%), Gaps = 2/281 (0%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| || | | |||||||||| |||||||||| |||||||||||||| ||| | Sbjct: 1221 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtcggcg 1162 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || |||||||||| ||||||||||||||||||||| ||||| ||||||||||| || ||| Sbjct: 1161 agggtgcggccatcctcgagctgcttgccggcgaagatgagacgctgctggtctgggggg 1102 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| ||||||||| ||||||||||||||||||||| | ||| || ||| Sbjct: 1101 atgccctccttgtcctggatcttggccttgacgttgtcgatggtgtccgagctctcaacc 1042 Query: 270 ttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaa 329 | ||| |||||||||||||| || |||| ||||||| || |||| ||||||||||| || Sbjct: 1041 tccagggtgatggtcttgcctgtgaggg-tcttgacaaagatctgcataccaccac-gaa 984 Query: 330 ggcggagcaccaggtggagggtngactccttntggatgttg 370 |||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 983 ggcggagcacaaggtggagggtggactccttctggatgttg 943 Score = 194 bits (98), Expect = 1e-46 Identities = 218/260 (83%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 |||||||| || |||| |||||||||||||| ||| | || || | ||| | ||| ||| Sbjct: 744 aggtgaagcgttgactccttctggatgttgtagtcagcaagggtcctgccgtcctcaagc 685 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||||||||| || ||||| |||||||||||||| || ||||||| ||||| ||||||| Sbjct: 684 tgcttgccggcaaagatgagacgctgctggtccgggggaatgccctccttgtcctggatc 625 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||||||||||||||||||| |||| || | ||||| || |||||||||||||| Sbjct: 624 ttggccttgacgttgtcgatggtgtcagaagattccacctcgagggtgatggtcttgccg 565 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 ||||| | ||||||| || |||| ||| ||||||| |||||||| || |||||||||| Sbjct: 564 gtcagtg-tcttgacaaagatctgcatgccaccac-ggaggcggaggacaaggtggaggg 507 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 506 tggactccttctggatgttg 487 Score = 194 bits (98), Expect = 1e-46 Identities = 218/260 (83%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||||| ||| | || || | ||||| ||| ||| Sbjct: 516 aggtggagggtggactccttctggatgttgtagtcagcaagggtcctgccatcctccagc 457 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||||||||| ||||| ||||||||||| || |||||||||| |||| ||||||| Sbjct: 456 tgcttgccggcgaagatgagacgctgctggtctggggggatgccctctttgtcctggatc 397 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||||||||||||||||||| |||| |||| ||||| || ||||| |||||||| Sbjct: 396 ttggccttgacgttgtcgatggtgtcagaagactccacctcaagggtgatagtcttgccg 337 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 ||||| | ||||||| || |||| ||| ||||||| |||||||| || ||||| |||| Sbjct: 336 gtcagag-tcttgacaaagatctgcatgccaccac-ggaggcggaggacaaggtgaaggg 279 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 278 tcgactccttctggatgttg 259 Score = 157 bits (79), Expect = 3e-35 Identities = 172/206 (83%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| |||| |||| ||||| ||||| |||| |||||||||||||| ||| | Sbjct: 993 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtcagca 934 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || || | ||||| ||| ||||||||||| || || |||||||||||||||||||| || Sbjct: 933 agggtcctgccatcctccagctgcttgccagcaaagatgaggcgctgctggtccggggga 874 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| ||||||||| |||||||| ||||||||||| |||| |||| |||| Sbjct: 873 atgccctccttgtcctggatcttggccttgacattgtcgatggtatcagaagactccacc 814 Query: 270 ttcagtgtgatggtcttgcccgtcag 295 | || |||||||||||||| ||||| Sbjct: 813 tcgagggtgatggtcttgccggtcag 788 Score = 151 bits (76), Expect = 2e-33 Identities = 155/184 (84%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||||||||| |||| |||||||||||||| ||| | || || | ||||| ||| ||| Sbjct: 288 aggtgaagggtcgactccttctggatgttgtagtcagcaagggtcctgccatcctccagc 229 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| ||||| ||||| |||||||||||||| |||||||||| ||| | |||||| Sbjct: 228 tgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttatcttggatc 169 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || |||||||| || ||||||||| ||||||||| ||||| || ||||| |||||||| Sbjct: 168 ttagccttgacattatcgatggtgtcagaggactccacctcgagggtgatagtcttgccg 109 Query: 291 gtca 294 |||| Sbjct: 108 gtca 105 Score = 143 bits (72), Expect = 5e-31 Identities = 227/281 (80%), Gaps = 2/281 (0%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| |||| |||||||||| ||||| |||| |||||||||||||| ||| | Sbjct: 1449 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 1390 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || ||||| |||| ||| ||||||||||| ||||| || || ||||||||||| || || Sbjct: 1389 agggtgcgtccatcctccagctgcttgccagcgaagatcagacgctgctggtctggggga 1330 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 || |||| ||||| ||||||||| ||||| || || || |||||| | ||| || ||| Sbjct: 1329 atcccctccttgtcctggatcttggccttcacattatcaatggtgtcggagctctcaacc 1270 Query: 270 ttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaa 329 | || ||||||||||| || |||| || |||| || || |||| ||||||||||| | Sbjct: 1269 tccaaagtgatggtcttcccagtcaagg-tcttcacgaagatctgcataccaccac-gga 1212 Query: 330 ggcggagcaccaggtggagggtngactccttntggatgttg 370 | || ||||||||||||||||| |||||||| ||||||||| Sbjct: 1211 gacgaagcaccaggtggagggtagactccttctggatgttg 1171
>dbj|AK061956.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F08, full insert sequence Length = 1640 Score = 270 bits (136), Expect = 3e-69 Identities = 243/281 (86%), Gaps = 2/281 (0%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| || | | |||||||||| |||||||||| |||||||||||||| ||| | Sbjct: 1218 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtcggcg 1159 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || |||||||||| ||||||||||||||||||||| ||||| ||||||||||| || ||| Sbjct: 1158 agggtgcggccatcctcgagctgcttgccggcgaagatgagacgctgctggtctgggggg 1099 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| ||||||||| ||||||||||||||||||||| | ||| || ||| Sbjct: 1098 atgccctccttgtcctggatcttggccttgacgttgtcgatggtgtccgagctctcaacc 1039 Query: 270 ttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaa 329 | ||| |||||||||||||| || |||| ||||||| || |||| ||||||||||| || Sbjct: 1038 tccagggtgatggtcttgcctgtgaggg-tcttgacaaagatctgcataccaccac-gaa 981 Query: 330 ggcggagcaccaggtggagggtngactccttntggatgttg 370 |||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 980 ggcggagcacaaggtggagggtggactccttctggatgttg 940 Score = 194 bits (98), Expect = 1e-46 Identities = 218/260 (83%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 |||||||| || |||| |||||||||||||| ||| | || || | ||| | ||| ||| Sbjct: 741 aggtgaagcgttgactccttctggatgttgtagtcagcaagggtcctgccgtcctcaagc 682 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||||||||| || ||||| |||||||||||||| || ||||||| ||||| ||||||| Sbjct: 681 tgcttgccggcaaagatgagacgctgctggtccgggggaatgccctccttgtcctggatc 622 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||||||||||||||||||| |||| || | ||||| || |||||||||||||| Sbjct: 621 ttggccttgacgttgtcgatggtgtcagaagattccacctcgagggtgatggtcttgccg 562 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 ||||| | ||||||| || |||| ||| ||||||| |||||||| || |||||||||| Sbjct: 561 gtcagtg-tcttgacaaagatctgcatgccaccac-ggaggcggaggacaaggtggaggg 504 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 503 tggactccttctggatgttg 484 Score = 186 bits (94), Expect = 3e-44 Identities = 217/260 (83%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||||| ||| | || || | ||||| ||| ||| Sbjct: 513 aggtggagggtggactccttctggatgttgtagtcagcaagggtcctgccatcctccagc 454 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||||||||| ||||| ||||||||||| || ||| |||||| |||| ||||||| Sbjct: 453 tgcttgccggcgaagatgagacgctgctggtctgggggggtgccctctttgtcctggatc 394 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||||||||||||||||||| |||| |||| ||||| || ||||| |||||||| Sbjct: 393 ttggccttgacgttgtcgatggtgtcagaagactccacctcaagggtgatagtcttgccg 334 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 ||||| | ||||||| || |||| ||| ||||||| |||||||| || ||||| |||| Sbjct: 333 gtcagag-tcttgacaaagatctgcatgccaccac-ggaggcggaggacaaggtgaaggg 276 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 275 tcgactccttctggatgttg 256 Score = 157 bits (79), Expect = 3e-35 Identities = 172/206 (83%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| |||| |||| ||||| ||||| |||| |||||||||||||| ||| | Sbjct: 990 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtcagca 931 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || || | ||||| ||| ||||||||||| || || |||||||||||||||||||| || Sbjct: 930 agggtcctgccatcctccagctgcttgccagcaaagatgaggcgctgctggtccggggga 871 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| ||||||||| |||||||| ||||||||||| |||| |||| |||| Sbjct: 870 atgccctccttgtcctggatcttggccttgacattgtcgatggtatcagaagactccacc 811 Query: 270 ttcagtgtgatggtcttgcccgtcag 295 | || |||||||||||||| ||||| Sbjct: 810 tcgagggtgatggtcttgccggtcag 785 Score = 151 bits (76), Expect = 2e-33 Identities = 155/184 (84%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||||||||| |||| |||||||||||||| ||| | || || | ||||| ||| ||| Sbjct: 285 aggtgaagggtcgactccttctggatgttgtagtcagcaagggtcctgccatcctccagc 226 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| ||||| ||||| |||||||||||||| |||||||||| ||| | |||||| Sbjct: 225 tgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttatcttggatc 166 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || |||||||| || ||||||||| ||||||||| ||||| || ||||| |||||||| Sbjct: 165 ttagccttgacattatcgatggtgtcagaggactccacctcgagggtgatagtcttgccg 106 Query: 291 gtca 294 |||| Sbjct: 105 gtca 102 Score = 143 bits (72), Expect = 5e-31 Identities = 227/281 (80%), Gaps = 2/281 (0%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| |||| |||||||||| ||||| |||| |||||||||||||| ||| | Sbjct: 1446 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 1387 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || ||||| |||| ||| ||||||||||| ||||| || || ||||||||||| || || Sbjct: 1386 agggtgcgtccatcctccagctgcttgccagcgaagatcagacgctgctggtctggggga 1327 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 || |||| ||||| ||||||||| ||||| || || || |||||| | ||| || ||| Sbjct: 1326 atcccctccttgtcctggatcttggccttcacattatcaatggtgtcggagctctcaacc 1267 Query: 270 ttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaa 329 | || ||||||||||| || |||| || |||| || || |||| ||||||||||| | Sbjct: 1266 tccaaagtgatggtcttcccagtcaagg-tcttcacgaagatctgcataccaccac-gga 1209 Query: 330 ggcggagcaccaggtggagggtngactccttntggatgttg 370 | || ||||||||||||||||| |||||||| ||||||||| Sbjct: 1208 gacgaagcaccaggtggagggtagactccttctggatgttg 1168
>gb|AF093504.1|AF093504 Saccharum hybrid cultivar H32-8560 tetra-ubiquitin (ubi4) gene, complete cds Length = 5551 Score = 268 bits (135), Expect = 1e-68 Identities = 232/265 (87%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| || || |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 2697 gcaccaggtggagagtggactccttctggatgttgtagtctgccagggtgcggccatcct 2638 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| ||||| |||||||||||||| |||||||||| ||||| || Sbjct: 2637 ccagctgcttgccggcgaagatgagacgctgctggtccggggggatgccctccttgtcct 2578 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||||||||| || |||||||||||| ||||||||| ||||| ||| |||||||||| Sbjct: 2577 ggatcttcgccttcacattgtcgatggtgtcagaggactccacctccagggtgatggtct 2518 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| || |||| ||||||| || |||| ||||||||| | ||| ||||||||||||||| Sbjct: 2517 tgccggtgaggg-tcttgacgaagatctgcataccaccgcgnaa-gcggagcaccaggtg 2460 Query: 346 gagggtngactccttntggatgttg 370 ||||| |||||||| ||||||||| Sbjct: 2459 aagggtggactccttctggatgttg 2435 Score = 161 bits (81), Expect = 2e-36 Identities = 204/248 (82%), Gaps = 2/248 (0%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| | |||||||||||| ||| | || |||||||||| ||||||||||||||| ||| Sbjct: 2224 gactccntctggatgttgtagtcagcgagggtgcggccatcctcgagctgcttgccagcg 2165 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || ||||| |||||||||||||| ||||| |||| ||||| ||||||||| ||||| ||| Sbjct: 2164 aagatgagacgctgctggtccggggggattccctccttgtcctggatcttggccttcacg 2105 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttctt 302 |||||||| ||| |||| |||| |||| || ||||| |||||||| || |||| |||| Sbjct: 2104 ttgtcgatcgtgtcagaagactcgacctcaagcgtgatagtcttgccagtgaggg-tctt 2046 Query: 303 gacnaanatctncataccaccacanaaggcggagcaccaggtggagggtngactccttnt 362 ||| || || | ||| || || | || | |||||||||||||| ||| |||||||| | Sbjct: 2045 gacgaagatttgcatgcctcc-cctgagcctgagcaccaggtggasggtggactccttct 1987 Query: 363 ggatgttg 370 |||||||| Sbjct: 1986 ggatgttg 1979 Score = 159 bits (80), Expect = 8e-36 Identities = 181/218 (83%), Gaps = 1/218 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||||||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 2469 gcaccaggtgaagggtggactccttctggatgttgtagtctgctagggtgcggccatcct 2410 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| || ||||| || ||||||||||| || ||||| || | ||||| || Sbjct: 2409 caagctgcttgccagcaaaaataagacgctgctggtctggggggattccttccttgtcct 2350 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 |||||||| |||| || ||||| |||||| | || |||| ||||| || |||||||||| Sbjct: 2349 ggatcttcnccttcacattgtcnatggtgtccgaagactccacctccaaggtgatggtct 2290 Query: 286 tgcccgtcagggttcttgacnaanatctncataccacc 323 |||| || | || ||||||| || |||| ||| ||||| Sbjct: 2289 tgccagtnaagg-tcttgacaaaaatctgcatgccacc 2253 Score = 93.7 bits (47), Expect = 4e-16 Identities = 152/193 (78%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| | ||| |||| |||||||||||||| ||| || || ||||||| || Sbjct: 2013 gcaccaggtggasggtggactccttctggatgttgtagtcarctagggtacggccatcct 1954 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||| || || || || | |||||| |||||||| ||||| | ||||| || Sbjct: 1953 cgagctgcttgccagcaaagatcagcctctgctgatccggaggaatgccttccttgtcct 1894 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 | ||||| |||| ||| | ||| || || | || |||| |||| || |||||||||| Sbjct: 1893 gtatcttagcctkgacatkgtcaataktgtctgaagactcaacctcaagggtgatggtct 1834 Query: 286 tgcccgtcagggt 298 |||| || ||||| Sbjct: 1833 tgccagtgagggt 1821 Score = 58.0 bits (29), Expect = 2e-05 Identities = 36/39 (92%) Strand = Plus / Minus Query: 332 cggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||||||| || |||||||| ||||||||| Sbjct: 2701 cggagcaccaggtggagagtggactccttctggatgttg 2663
>emb|X69422.1|AFTETUBI A.fatua mRNA for tetraubiquitin Length = 1196 Score = 254 bits (128), Expect = 2e-64 Identities = 252/296 (85%), Gaps = 2/296 (0%) Strand = Plus / Minus Query: 75 ccaggcncttacttgccaccacgcaggctangcaccaggtgaagggtagactncttctgg 134 |||||| |||||| ||||||||| || | |||||||||||||||| |||| ||||||| Sbjct: 958 ccaggcacttactggccaccacggagacggagcaccaggtgaagggtggactccttctgg 899 Query: 135 atgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgc 194 ||||||| ||| | || |||||||||| |||||||||||||||||| || ||||||||| Sbjct: 898 atgttgtagtcggcaagggtgcggccatcctcgagctgcttgccggcaaagatgaggcgc 839 Query: 195 tgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtg 254 ||||||||||| |||||||||| ||||| ||||||||| ||||| || ||||| |||||| Sbjct: 838 tgctggtccggggggatgccctccttgtcctggatcttggccttcacattgtcaatggtg 779 Query: 255 ncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctn 314 |||| |||| |||| | |||||||||||||| || |||| ||||||| || |||| Sbjct: 778 tcagacgactcaacctctaaggtgatggtcttgccagtgaggg-tcttgacgaagatctg 720 Query: 315 cataccaccacanaaggcggagcaccaggtggagggtngactccttntggatgttg 370 ||| ||||||| ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 719 catgccaccac-ggaggcggagcaccaggtggagggtggactccttctggatgttg 665 Score = 196 bits (99), Expect = 4e-47 Identities = 222/265 (83%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||| ||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 471 gcaccaagtggagggtggactccttctggatgttgtagtccgcaagggtgcggccatcct 412 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | |||||||| || || || || ||||||||||||||||| || ||||||| ||||| || Sbjct: 411 caagctgcttaccagcaaagatcaggcgctgctggtccgggggaatgccctccttgtcct 352 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| || ||||| |||||| |||| |||| |||| ||| |||||||||| Sbjct: 351 ggatcttggccttcacattgtcaatggtgtcagacgactcaacctccagggtgatggtct 292 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| || |||| ||||||| || |||| ||| ||||| | ||||||||||||||||| Sbjct: 291 tgccggtgaggg-tcttgacgaagatctgcatgccaccgc-ggaggcggagcaccaggtg 234 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||||| ||||||||| Sbjct: 233 gagggtggactccttctggatgttg 209 Score = 186 bits (94), Expect = 3e-44 Identities = 234/283 (82%), Gaps = 2/283 (0%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 |||||||||| |||| |||||||||| ||||| |||| |||||||||||||| ||| | Sbjct: 717 tgccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtcgg 658 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 ||||||||||| | ||| || ||||| || || || ||||| ||||||||||| |||| Sbjct: 657 cgagagtgcggccgtcctcaagttgctttccagcaaagatgagacgctgctggtctggag 598 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||| | ||||| ||||||||||||||| || |||||||| ||| | || |||| | Sbjct: 597 ggatgccttccttgtcctggatcttcgccttcacattgtcgattgtgtctgaagactcaa 538 Query: 268 ccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacan 327 ||| ||| ||||||||||| || || |||| ||||||| || |||| ||| ||||| | Sbjct: 537 cctccagggtgatggtcttaccagtgaggg-tcttgacgaagatctgcatgccaccgc-g 480 Query: 328 aaggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||| ||||||||| |||||||| ||||||||| Sbjct: 479 gaggcggagcaccaagtggagggtggactccttctggatgttg 437 Score = 161 bits (81), Expect = 2e-36 Identities = 163/193 (84%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| |||||||||||||| ||| | || |||||||| | || Sbjct: 243 gcaccaggtggagggtggactccttctggatgttgtagtcagcaagggtgcggccgtcct 184 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | || |||||||| || || |||||||||||||| |||||||||||||| | ||||| || Sbjct: 183 ctagttgcttgccagcaaatatgaggcgctgctgatccggagggatgccttccttgtcct 124 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| |||||| |||| |||| |||| ||||||||||||| Sbjct: 123 ggatctttgccttgacattgtcaatggtgtcagaagactcgacctcaagtgtgatggtct 64 Query: 286 tgcccgtcagggt 298 |||| || ||||| Sbjct: 63 tgccagtgagggt 51
>gb|M60176.1|BLYMUB2 Barley ubiquitin (mub2) gene, complete cds Length = 1730 Score = 242 bits (122), Expect = 7e-61 Identities = 185/209 (88%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| |||| |||||||||| ||||| |||| |||||||||||||| ||| | Sbjct: 976 ccaccacgaaggcggagcaccaggtggagggtggactccttctggatgttgtagtcggcg 917 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 ||||| ||||||| ||||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 916 agagtacggccatcctcgagctgcttgccggcgaagatgaggcgttgctggtccggcggg 857 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| ||||||||| ||||||||||||||||||||| | ||||||| |||| Sbjct: 856 atgccctccttgtcctggatcttggccttgacgttgtcgatggtgtccgaggactccacc 797 Query: 270 ttcagtgtgatggtcttgcccgtcagggt 298 | ||| ||||||||||||||||||||||| Sbjct: 796 tccagcgtgatggtcttgcccgtcagggt 768 Score = 73.8 bits (37), Expect = 4e-10 Identities = 41/43 (95%) Strand = Plus / Minus Query: 328 aaggcggagcaccaggtggagggtngactccttntggatgttg 370 |||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 968 aaggcggagcaccaggtggagggtggactccttctggatgttg 926
>gb|AY290730.1| Triticum aestivum ubiquitin-like mRNA, partial sequence Length = 510 Score = 232 bits (117), Expect = 6e-58 Identities = 172/193 (89%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| |||||||||||||| ||| | || |||||||| | || Sbjct: 376 gcaccaggtggagggtggactccttctggatgttgtagtcggcgagggtgcggccgtcct 317 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 |||||||||| |||||||| |||||||||||||||||||| |||||||||| ||||| || Sbjct: 316 cgagctgcttaccggcgaagatgaggcgctgctggtccggcgggatgccctccttgtcct 257 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||||||||||||||||||| | ||||||| ||||| ||| |||||||||| Sbjct: 256 ggatcttggccttgacgttgtcgatggtgtccgaggactccacctccagcgtgatggtct 197 Query: 286 tgcccgtcagggt 298 ||||||||||||| Sbjct: 196 tgcccgtcagggt 184 Score = 71.9 bits (36), Expect = 1e-09 Identities = 40/42 (95%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 383 aggcggagcaccaggtggagggtggactccttctggatgttg 342
>gb|M60175.1|BLYMUB1 Barley ubiquitin (mub1) gene, complete cds Length = 1815 Score = 232 bits (117), Expect = 6e-58 Identities = 172/193 (89%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| |||||||||||||| ||| | || |||||||| | || Sbjct: 769 gcaccaggtggagggtggactccttctggatgttgtagtcggcgagggtgcggccgtcct 710 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||| || Sbjct: 709 cgagctgcttgccggcgaagatgaggcgctgctggtccggcgggatgccctccttgtcct 650 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||||||||||||||||||| | || |||| ||||| ||| |||||||||| Sbjct: 649 ggatcttggccttgacgttgtcgatggtgtccgacgactccacctccagcgtgatggtct 590 Query: 286 tgcccgtcagggt 298 ||||||||||||| Sbjct: 589 tgcccgtcagggt 577 Score = 65.9 bits (33), Expect = 9e-08 Identities = 37/39 (94%) Strand = Plus / Minus Query: 332 cggagcaccaggtggagggtngactccttntggatgttg 370 |||||||||||||||||||| |||||||| ||||||||| Sbjct: 773 cggagcaccaggtggagggtggactccttctggatgttg 735
>ref|XM_473982.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1146 Score = 226 bits (114), Expect = 4e-56 Identities = 222/260 (85%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||| | ||| | || |||||||||| ||||||| Sbjct: 1118 aggtgcagggtggactccttctggatgttatagtcggcaagggtgcggccatcctcgagc 1059 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||||||||| ||||||||||||||||| ||||||||||||| ||| | ||||||| Sbjct: 1058 tgcttgccggcgaagatgaggcgctgctggtctggagggatgccctccttatcctggatc 999 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| ||||||||||||||| ||||||||| |||| ||| |||||||||||||| Sbjct: 998 ttggccttcacgttgtcgatggtgtcagaggactcaacctccagagtgatggtcttgcca 939 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || |||| |||| || || |||| |||||| |||| |||||| || || ||||| |||| Sbjct: 938 gtgaggg-tcttcacgaagatctgcatacctccac-gaaggcgcaggacaaggtgcaggg 881 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 880 tggactccttctggatgttg 861 Score = 168 bits (85), Expect = 8e-39 Identities = 214/259 (82%), Gaps = 2/259 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||||| |||| || ||||| |||| ||| ||| Sbjct: 890 aggtgcagggtggactccttctggatgttgtaatctgcaagggtgcgaccatcctcaagc 831 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| ||||| ||||||||||||||||| || || || |||| ||||| ||||||| Sbjct: 830 tgcttgccagcgaagatgaggcgctgctggtctggtggaataccctccttgtcctggatc 771 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| || |||||||| ||| |||| |||| |||| ||| |||||||||||||| Sbjct: 770 ttggccttcacattgtcgatcgtgtcagacgactcaacctccagggtgatggtcttgccg 711 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || |||| |||| || || |||| |||||| |||| ||||||||| |||| ||| | || Sbjct: 710 gtgaggg-tcttcacgaagatctgcatacctccac-gaaggcggaggaccaagtgcaagg 653 Query: 351 tngactccttntggatgtt 369 | |||||||| |||||||| Sbjct: 652 tggactccttctggatgtt 634 Score = 129 bits (65), Expect = 7e-27 Identities = 209/259 (80%), Gaps = 2/259 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| || | ||| |||||||||| ||||| || |||||||||| ||||||| Sbjct: 434 aggtgcagggtggattccttttggatgttgtagtctgcaagggtgcggccatcctcgagc 375 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||| || || || ||||| ||||||||||| || ||||| |||| ||||| ||||||| Sbjct: 374 tgcttcccagcaaagatgagacgctgctggtctggtgggattccctccttgtcctggatc 315 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| || || ||||| ||| | ||||||| |||| ||| || ||||||||||| Sbjct: 314 ttggccttcacattatcgatcgtgtcggaggactcgacctccagggtaatggtcttgccg 255 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || |||| |||| || || || | ||| || |||| ||||||||| || ||||| | || Sbjct: 254 gtgaggg-tcttcacgaatatttgcatgcctccac-gaaggcggaggacaaggtgcaagg 197 Query: 351 tngactccttntggatgtt 369 | |||||||| |||||||| Sbjct: 196 tggactccttctggatgtt 178 Score = 115 bits (58), Expect = 1e-22 Identities = 199/248 (80%), Gaps = 2/248 (0%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||| | ||| | || |||||||| | ||| ||||||||||| ||| Sbjct: 650 gactccttctggatgttatagtcagcaagggtgcggccgtcctcaagctgcttgccagcg 591 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || ||||| ||||||||||| || || || |||| ||||| ||||||||| ||||| || Sbjct: 590 aagatgagccgctgctggtctggtggaataccctccttgtcctggatcttggccttcaca 531 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttctt 302 |||||||| ||| ||||||||| |||| || ||||| |||||||| || |||| |||| Sbjct: 530 ttgtcgatcgtgtcagaggactcaacctccaaggtgatcgtcttgccagtaaggg-tctt 472 Query: 303 gacnaanatctncataccaccacanaaggcggagcaccaggtggagggtngactccttnt 362 || || |||| |||||| || | ||||| || || ||||| ||||| || ||||| | Sbjct: 471 cacaaagatctgcataccgcc-ccggaggcgcaggacaaggtgcagggtggattcctttt 413 Query: 363 ggatgttg 370 |||||||| Sbjct: 412 ggatgttg 405 Score = 95.6 bits (48), Expect = 1e-16 Identities = 142/176 (80%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||| | || | ||||| || |||| ||| ||||||||||| ||| Sbjct: 194 gactccttctggatgttataatccgcgagagtacgcccatcctcaagctgcttgccagcg 135 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || || ||||| |||||||||||||||||||||| ||||| ||| ||||| ||||| || Sbjct: 134 aagataaggcgttgctggtccggagggatgccctccttgtcctgaatcttagccttcaca 75 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggt 298 ||||| || || | ||| ||| |||| || |||||||||||||| || ||||| Sbjct: 74 ttgtcaatcgtatcggagaactcaacctccaaggtgatggtcttgccagtgagggt 19
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 226 bits (114), Expect = 4e-56 Identities = 222/260 (85%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||| | ||| | || |||||||||| ||||||| Sbjct: 31998788 aggtgcagggtggactccttctggatgttatagtcggcaagggtgcggccatcctcgagc 31998729 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||||||||| ||||||||||||||||| ||||||||||||| ||| | ||||||| Sbjct: 31998728 tgcttgccggcgaagatgaggcgctgctggtctggagggatgccctccttatcctggatc 31998669 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| ||||||||||||||| ||||||||| |||| ||| |||||||||||||| Sbjct: 31998668 ttggccttcacgttgtcgatggtgtcagaggactcaacctccagagtgatggtcttgcca 31998609 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || |||| |||| || || |||| |||||| |||| |||||| || || ||||| |||| Sbjct: 31998608 gtgaggg-tcttcacgaagatctgcatacctccac-gaaggcgcaggacaaggtgcaggg 31998551 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 31998550 tggactccttctggatgttg 31998531 Score = 168 bits (85), Expect = 8e-39 Identities = 214/259 (82%), Gaps = 2/259 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||||| |||| || ||||| |||| ||| ||| Sbjct: 31998560 aggtgcagggtggactccttctggatgttgtaatctgcaagggtgcgaccatcctcaagc 31998501 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| ||||| ||||||||||||||||| || || || |||| ||||| ||||||| Sbjct: 31998500 tgcttgccagcgaagatgaggcgctgctggtctggtggaataccctccttgtcctggatc 31998441 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| || |||||||| ||| |||| |||| |||| ||| |||||||||||||| Sbjct: 31998440 ttggccttcacattgtcgatcgtgtcagacgactcaacctccagggtgatggtcttgccg 31998381 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || |||| |||| || || |||| |||||| |||| ||||||||| |||| ||| | || Sbjct: 31998380 gtgaggg-tcttcacgaagatctgcatacctccac-gaaggcggaggaccaagtgcaagg 31998323 Query: 351 tngactccttntggatgtt 369 | |||||||| |||||||| Sbjct: 31998322 tggactccttctggatgtt 31998304 Score = 129 bits (65), Expect = 7e-27 Identities = 209/259 (80%), Gaps = 2/259 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| || | ||| |||||||||| ||||| || |||||||||| ||||||| Sbjct: 31998104 aggtgcagggtggattccttttggatgttgtagtctgcaagggtgcggccatcctcgagc 31998045 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||| || || || ||||| ||||||||||| || ||||| |||| ||||| ||||||| Sbjct: 31998044 tgcttcccagcaaagatgagacgctgctggtctggtgggattccctccttgtcctggatc 31997985 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| || || ||||| ||| | ||||||| |||| ||| || ||||||||||| Sbjct: 31997984 ttggccttcacattatcgatcgtgtcggaggactcgacctccagggtaatggtcttgccg 31997925 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || |||| |||| || || || | ||| || |||| ||||||||| || ||||| | || Sbjct: 31997924 gtgaggg-tcttcacgaatatttgcatgcctccac-gaaggcggaggacaaggtgcaagg 31997867 Query: 351 tngactccttntggatgtt 369 | |||||||| |||||||| Sbjct: 31997866 tggactccttctggatgtt 31997848 Score = 115 bits (58), Expect = 1e-22 Identities = 199/248 (80%), Gaps = 2/248 (0%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||| | ||| | || |||||||| | ||| ||||||||||| ||| Sbjct: 31998320 gactccttctggatgttatagtcagcaagggtgcggccgtcctcaagctgcttgccagcg 31998261 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || ||||| ||||||||||| || || || |||| ||||| ||||||||| ||||| || Sbjct: 31998260 aagatgagccgctgctggtctggtggaataccctccttgtcctggatcttggccttcaca 31998201 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttctt 302 |||||||| ||| ||||||||| |||| || ||||| |||||||| || |||| |||| Sbjct: 31998200 ttgtcgatcgtgtcagaggactcaacctccaaggtgatcgtcttgccagtaaggg-tctt 31998142 Query: 303 gacnaanatctncataccaccacanaaggcggagcaccaggtggagggtngactccttnt 362 || || |||| |||||| || | ||||| || || ||||| ||||| || ||||| | Sbjct: 31998141 cacaaagatctgcataccgcc-ccggaggcgcaggacaaggtgcagggtggattcctttt 31998083 Query: 363 ggatgttg 370 |||||||| Sbjct: 31998082 ggatgttg 31998075 Score = 95.6 bits (48), Expect = 1e-16 Identities = 142/176 (80%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||| | || | ||||| || |||| ||| ||||||||||| ||| Sbjct: 31997864 gactccttctggatgttataatccgcgagagtacgcccatcctcaagctgcttgccagcg 31997805 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || || ||||| |||||||||||||||||||||| ||||| ||| ||||| ||||| || Sbjct: 31997804 aagataaggcgttgctggtccggagggatgccctccttgtcctgaatcttagccttcaca 31997745 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggt 298 ||||| || || | ||| ||| |||| || |||||||||||||| || ||||| Sbjct: 31997744 ttgtcaatcgtatcggagaactcaacctccaaggtgatggtcttgccagtgagggt 31997689
>gb|AY954394.1| Oryza sativa (japonica cultivar-group) polyubiquitin (rubi3) gene, promoter region and complete cds Length = 3733 Score = 226 bits (114), Expect = 4e-56 Identities = 222/260 (85%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||| | ||| | || |||||||||| ||||||| Sbjct: 3634 aggtgcagggtggactccttctggatgttatagtcggcaagggtgcggccatcctcgagc 3575 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||||||||| ||||||||||||||||| ||||||||||||| ||| | ||||||| Sbjct: 3574 tgcttgccggcgaagatgaggcgctgctggtctggagggatgccctccttatcctggatc 3515 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| ||||||||||||||| ||||||||| |||| ||| |||||||||||||| Sbjct: 3514 ttggccttcacgttgtcgatggtgtcagaggactcaacctccagagtgatggtcttgcca 3455 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || |||| |||| || || |||| |||||| |||| |||||| || || ||||| |||| Sbjct: 3454 gtgaggg-tcttcacgaagatctgcatacctccac-gaaggcgcaggacaaggtgcaggg 3397 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 3396 tggactccttctggatgttg 3377 Score = 161 bits (81), Expect = 2e-36 Identities = 213/259 (82%), Gaps = 2/259 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||||| |||| || ||||| |||| ||| ||| Sbjct: 3406 aggtgcagggtggactccttctggatgttgtaatctgcaagggtgcgaccatcctcaagc 3347 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| ||||| | ||||||||||||||| || || || |||| ||||| ||||||| Sbjct: 3346 tgcttgccagcgaagacgaggcgctgctggtctggtggaataccctccttgtcctggatc 3287 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| || |||||||| ||| |||| |||| |||| ||| |||||||||||||| Sbjct: 3286 ttggccttcacattgtcgatcgtgtcagacgactcaacctccagggtgatggtcttgccg 3227 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || |||| |||| || || |||| |||||| |||| ||||||||| |||| ||| | || Sbjct: 3226 gtgaggg-tcttcacgaagatctgcatacctccac-gaaggcggaggaccaagtgcaagg 3169 Query: 351 tngactccttntggatgtt 369 | |||||||| |||||||| Sbjct: 3168 tggactccttctggatgtt 3150 Score = 129 bits (65), Expect = 7e-27 Identities = 209/259 (80%), Gaps = 2/259 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| || | ||| |||||||||| ||||| || |||||||||| ||||||| Sbjct: 2950 aggtgcagggtggattccttttggatgttgtagtctgcaagggtgcggccatcctcgagc 2891 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||| || || || ||||| ||||||||||| || ||||| |||| ||||| ||||||| Sbjct: 2890 tgcttcccagcaaagatgagacgctgctggtctggtgggattccctccttgtcctggatc 2831 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| || || ||||| ||| | ||||||| |||| ||| || ||||||||||| Sbjct: 2830 ttggccttcacattatcgatcgtgtcggaggactcgacctccagggtaatggtcttgccg 2771 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || |||| |||| || || || | ||| || |||| ||||||||| || ||||| | || Sbjct: 2770 gtgaggg-tcttcacgaatatttgcatgcctccac-gaaggcggaggacaaggtgcaagg 2713 Query: 351 tngactccttntggatgtt 369 | |||||||| |||||||| Sbjct: 2712 tggactccttctggatgtt 2694 Score = 115 bits (58), Expect = 1e-22 Identities = 199/248 (80%), Gaps = 2/248 (0%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||| | ||| | || |||||||| | ||| ||||||||||| ||| Sbjct: 3166 gactccttctggatgttatagtcagcaagggtgcggccgtcctcaagctgcttgccagcg 3107 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || ||||| ||||||||||| || || || |||| ||||| ||||||||| ||||| || Sbjct: 3106 aagatgagccgctgctggtctggtggaataccctccttgtcctggatcttggccttcaca 3047 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttctt 302 |||||||| ||| ||||||||| |||| || ||||| |||||||| || |||| |||| Sbjct: 3046 ttgtcgatcgtgtcagaggactcaacctccaaggtgatcgtcttgccagtaaggg-tctt 2988 Query: 303 gacnaanatctncataccaccacanaaggcggagcaccaggtggagggtngactccttnt 362 || || |||| |||||| || | ||||| || || ||||| ||||| || ||||| | Sbjct: 2987 cacaaagatctgcataccgcc-ccggaggcgcaggacaaggtgcagggtggattcctttt 2929 Query: 363 ggatgttg 370 |||||||| Sbjct: 2928 ggatgttg 2921 Score = 95.6 bits (48), Expect = 1e-16 Identities = 142/176 (80%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||| | || | ||||| || |||| ||| ||||||||||| ||| Sbjct: 2710 gactccttctggatgttataatccgcgagagtacgcccatcctcaagctgcttgccagcg 2651 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || || ||||| |||||||||||||||||||||| ||||| ||| ||||| ||||| || Sbjct: 2650 aagataaggcgttgctggtccggagggatgccctccttgtcctgaatcttagccttcaca 2591 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggt 298 ||||| || || | ||| ||| |||| || |||||||||||||| || ||||| Sbjct: 2590 ttgtcaatcgtatcggagaactcaacctccaaggtgatggtcttgccagtgagggt 2535
>dbj|AK102389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092E11, full insert sequence Length = 2497 Score = 226 bits (114), Expect = 4e-56 Identities = 222/260 (85%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||| | ||| | || |||||||||| ||||||| Sbjct: 2327 aggtgcagggtggactccttctggatgttatagtcggcaagggtgcggccatcctcgagc 2268 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||||||||| ||||||||||||||||| ||||||||||||| ||| | ||||||| Sbjct: 2267 tgcttgccggcgaagatgaggcgctgctggtctggagggatgccctccttatcctggatc 2208 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| ||||||||||||||| ||||||||| |||| ||| |||||||||||||| Sbjct: 2207 ttggccttcacgttgtcgatggtgtcagaggactcaacctccagagtgatggtcttgcca 2148 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || |||| |||| || || |||| |||||| |||| |||||| || || ||||| |||| Sbjct: 2147 gtgaggg-tcttcacgaagatctgcatacctccac-gaaggcgcaggacaaggtgcaggg 2090 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 2089 tggactccttctggatgttg 2070 Score = 168 bits (85), Expect = 8e-39 Identities = 214/259 (82%), Gaps = 2/259 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||||| |||| || ||||| |||| ||| ||| Sbjct: 2099 aggtgcagggtggactccttctggatgttgtaatctgcaagggtgcgaccatcctcaagc 2040 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| ||||| ||||||||||||||||| || || || |||| ||||| ||||||| Sbjct: 2039 tgcttgccagcgaagatgaggcgctgctggtctggtggaataccctccttgtcctggatc 1980 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| || |||||||| ||| |||| |||| |||| ||| |||||||||||||| Sbjct: 1979 ttggccttcacattgtcgatcgtgtcagacgactcaacctccagggtgatggtcttgccg 1920 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || |||| |||| || || |||| |||||| |||| ||||||||| |||| ||| | || Sbjct: 1919 gtgaggg-tcttcacgaagatctgcatacctccac-gaaggcggaggaccaagtgcaagg 1862 Query: 351 tngactccttntggatgtt 369 | |||||||| |||||||| Sbjct: 1861 tggactccttctggatgtt 1843 Score = 115 bits (58), Expect = 1e-22 Identities = 199/248 (80%), Gaps = 2/248 (0%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||| | ||| | || |||||||| | ||| ||||||||||| ||| Sbjct: 1859 gactccttctggatgttatagtcagcaagggtgcggccgtcctcaagctgcttgccagcg 1800 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || ||||| ||||||||||| || || || |||| ||||| ||||||||| ||||| || Sbjct: 1799 aagatgagccgctgctggtctggtggaataccctccttgtcctggatcttggccttcaca 1740 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttctt 302 |||||||| ||| ||||||||| |||| || ||||| |||||||| || |||| |||| Sbjct: 1739 ttgtcgatcgtgtcagaggactcaacctccaaggtgatcgtcttgccagtaaggg-tctt 1681 Query: 303 gacnaanatctncataccaccacanaaggcggagcaccaggtggagggtngactccttnt 362 || || |||| |||||| || | ||||| || || ||||| ||||| || ||||| | Sbjct: 1680 cacaaagatctgcataccgcc-ccggaggcgcaggacaaggtgcagggtggattcctttt 1622 Query: 363 ggatgttg 370 |||||||| Sbjct: 1621 ggatgttg 1614 Score = 113 bits (57), Expect = 4e-22 Identities = 208/259 (80%), Gaps = 3/259 (1%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| || | ||| |||||||||| ||||| || |||||||||| ||||||| Sbjct: 1643 aggtgcagggtggattccttttggatgttgtagtctgcaagggtgcggccatcctcgagc 1584 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||| || || || ||||| ||||||| ||| || ||||| |||| ||||| ||||||| Sbjct: 1583 tgcttcccagcaaagatgagacgctgct-gtctggtgggattccctccttgtcctggatc 1525 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| || || ||||| ||| | ||||||| |||| ||| || ||||||||||| Sbjct: 1524 ttggccttcacattatcgatcgtgtcggaggactcgacctccagggtaatggtcttgccg 1465 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || |||| |||| || || || | ||| || |||| ||||||||| || ||||| | || Sbjct: 1464 gtgaggg-tcttcacgaatatttgcatgcctccac-gaaggcggaggacaaggtgcaagg 1407 Query: 351 tngactccttntggatgtt 369 | |||||||| |||||||| Sbjct: 1406 tggactccttctggatgtt 1388 Score = 95.6 bits (48), Expect = 1e-16 Identities = 142/176 (80%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||| | || | ||||| || |||| ||| ||||||||||| ||| Sbjct: 1404 gactccttctggatgttataatccgcgagagtacgcccatcctcaagctgcttgccagcg 1345 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || || ||||| |||||||||||||||||||||| ||||| ||| ||||| ||||| || Sbjct: 1344 aagataaggcgttgctggtccggagggatgccctccttgtcctgaatcttagccttcaca 1285 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggt 298 ||||| || || | ||| ||| |||| || |||||||||||||| || ||||| Sbjct: 1284 ttgtcaatcgtatcggagaactcaacctccaaggtgatggtcttgccagtgagggt 1229
>dbj|AK058319.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A10, full insert sequence Length = 1421 Score = 226 bits (114), Expect = 4e-56 Identities = 222/260 (85%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||| | ||| | || |||||||||| ||||||| Sbjct: 1185 aggtgcagggtggactccttctggatgttatagtcggcaagggtgcggccatcctcgagc 1126 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||||||||| ||||||||||||||||| ||||||||||||| ||| | ||||||| Sbjct: 1125 tgcttgccggcgaagatgaggcgctgctggtctggagggatgccctccttatcctggatc 1066 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| ||||||||||||||| ||||||||| |||| ||| |||||||||||||| Sbjct: 1065 ttggccttcacgttgtcgatggtgtcagaggactcaacctccagagtgatggtcttgcca 1006 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || |||| |||| || || |||| |||||| |||| |||||| || || ||||| |||| Sbjct: 1005 gtgaggg-tcttcacgaagatctgcatacctccac-gaaggcgcaggacaaggtgcaggg 948 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 947 tggactccttctggatgttg 928 Score = 161 bits (81), Expect = 2e-36 Identities = 213/259 (82%), Gaps = 2/259 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||||| |||| || ||||| |||| ||| ||| Sbjct: 957 aggtgcagggtggactccttctggatgttgtaatctgcaagggtgcgaccatcctcaagc 898 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| ||||| ||||||||||||||||| || || || |||| ||||| ||||||| Sbjct: 897 tgcttgccagcgaagatgaggcgctgctggtctggtggaataccctccttgtcctggatc 838 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| || |||||||| ||| |||| |||| ||| ||| |||||||||||||| Sbjct: 837 ttggccttcacattgtcgatcgtgtcagacgactcaacccccagggtgatggtcttgccg 778 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || |||| |||| || || |||| |||||| |||| ||||||||| |||| ||| | || Sbjct: 777 gtgaggg-tcttcacgaagatctgcatacctccac-gaaggcggaggaccaagtgcaagg 720 Query: 351 tngactccttntggatgtt 369 | |||||||| |||||||| Sbjct: 719 tggactccttctggatgtt 701 Score = 129 bits (65), Expect = 7e-27 Identities = 209/259 (80%), Gaps = 2/259 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| || | ||| |||||||||| ||||| || |||||||||| ||||||| Sbjct: 501 aggtgcagggtggattccttttggatgttgtagtctgcaagggtgcggccatcctcgagc 442 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||| || || || ||||| ||||||||||| || ||||| |||| ||||| ||||||| Sbjct: 441 tgcttcccagcaaagatgagacgctgctggtctggtgggattccctccttgtcctggatc 382 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| || || ||||| ||| | ||||||| |||| ||| || ||||||||||| Sbjct: 381 ttggccttcacattatcgatcgtgtcggaggactcgacctccagggtaatggtcttgccg 322 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || |||| |||| || || || | ||| || |||| ||||||||| || ||||| | || Sbjct: 321 gtgaggg-tcttcacgaatatttgcatgcctccac-gaaggcggaggacaaggtgcaagg 264 Query: 351 tngactccttntggatgtt 369 | |||||||| |||||||| Sbjct: 263 tggactccttctggatgtt 245 Score = 115 bits (58), Expect = 1e-22 Identities = 199/248 (80%), Gaps = 2/248 (0%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||| | ||| | || |||||||| | ||| ||||||||||| ||| Sbjct: 717 gactccttctggatgttatagtcagcaagggtgcggccgtcctcaagctgcttgccagcg 658 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || ||||| ||||||||||| || || || |||| ||||| ||||||||| ||||| || Sbjct: 657 aagatgagccgctgctggtctggtggaataccctccttgtcctggatcttggccttcaca 598 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttctt 302 |||||||| ||| ||||||||| |||| || ||||| |||||||| || |||| |||| Sbjct: 597 ttgtcgatcgtgtcagaggactcaacctccaaggtgatcgtcttgccagtaaggg-tctt 539 Query: 303 gacnaanatctncataccaccacanaaggcggagcaccaggtggagggtngactccttnt 362 || || |||| |||||| || | ||||| || || ||||| ||||| || ||||| | Sbjct: 538 tacaaagatctgcataccgcc-ccggaggcgcaggacaaggtgcagggtggattcctttt 480 Query: 363 ggatgttg 370 |||||||| Sbjct: 479 ggatgttg 472 Score = 95.6 bits (48), Expect = 1e-16 Identities = 142/176 (80%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||| | || | ||||| || |||| ||| ||||||||||| ||| Sbjct: 261 gactccttctggatgttataatccgcgagagtacgcccatcctcaagctgcttgccagcg 202 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || || ||||| |||||||||||||||||||||| ||||| ||| ||||| ||||| || Sbjct: 201 aagataaggcgttgctggtccggagggatgccctccttgtcctgaatcttagccttcaca 142 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggt 298 ||||| || || | ||| ||| |||| || |||||||||||||| || ||||| Sbjct: 141 ttgtcaatcgtatcggagaactcaacctccaaggtgatggtcttgccagtgagggt 86
>dbj|D12776.1|RICPOLYUBI Oryza sativa (japonica cultivar-group) mRNA for poly-ubiquitin, partial cds Length = 744 Score = 226 bits (114), Expect = 4e-56 Identities = 222/260 (85%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||| | ||| | || |||||||||| ||||||| Sbjct: 542 aggtgcagggtggactccttctggatgttatagtcggcaagggtgcggccatcctcgagc 483 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||||||||| ||||||||||||||||| ||||||||||||| ||| | ||||||| Sbjct: 482 tgcttgccggcgaagatgaggcgctgctggtctggagggatgccctccttatcctggatc 423 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| ||||||||||||||| ||||||||| |||| ||| |||||||||||||| Sbjct: 422 ttggccttcacgttgtcgatggtgtcagaggactcaacctccagagtgatggtcttgcca 363 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || |||| |||| || || |||| |||||| |||| |||||| || || ||||| |||| Sbjct: 362 gtgaggg-tcttcacgaagatctgcatacctccac-gaaggcgcaggacaaggtgcaggg 305 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 304 tggactccttctggatgttg 285 Score = 168 bits (85), Expect = 8e-39 Identities = 214/259 (82%), Gaps = 2/259 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||||| |||| || ||||| |||| ||| ||| Sbjct: 314 aggtgcagggtggactccttctggatgttgtaatctgcaagggtgcgaccatcctcaagc 255 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| ||||| ||||||||||||||||| || || || |||| ||||| ||||||| Sbjct: 254 tgcttgccagcgaagatgaggcgctgctggtctggtggaataccctccttgtcctggatc 195 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| || |||||||| ||| |||| |||| |||| ||| |||||||||||||| Sbjct: 194 ttggccttcacattgtcgatcgtgtcagacgactcaacctccagggtgatggtcttgccg 135 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || |||| |||| || || |||| |||||| |||| ||||||||| |||| ||| | || Sbjct: 134 gtgaggg-tcttcacgaagatctgcatacctccac-gaaggcggaggaccaagtgcaagg 77 Query: 351 tngactccttntggatgtt 369 | |||||||| |||||||| Sbjct: 76 tggactccttctggatgtt 58 Score = 52.0 bits (26), Expect = 0.001 Identities = 61/74 (82%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||| | ||| | || |||||||| | ||| ||||||||||| ||| Sbjct: 74 gactccttctggatgttatagtcagcaagggtgcggccgtcctcaagctgcttgccagcg 15 Query: 183 aaaatgaggcgctg 196 || ||||| ||||| Sbjct: 14 aagatgagccgctg 1
>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06, complete sequence Length = 141752 Score = 226 bits (114), Expect = 4e-56 Identities = 222/260 (85%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||| | ||| | || |||||||||| ||||||| Sbjct: 19495 aggtgcagggtggactccttctggatgttatagtcggcaagggtgcggccatcctcgagc 19436 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||||||||| ||||||||||||||||| ||||||||||||| ||| | ||||||| Sbjct: 19435 tgcttgccggcgaagatgaggcgctgctggtctggagggatgccctccttatcctggatc 19376 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| ||||||||||||||| ||||||||| |||| ||| |||||||||||||| Sbjct: 19375 ttggccttcacgttgtcgatggtgtcagaggactcaacctccagagtgatggtcttgcca 19316 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || |||| |||| || || |||| |||||| |||| |||||| || || ||||| |||| Sbjct: 19315 gtgaggg-tcttcacgaagatctgcatacctccac-gaaggcgcaggacaaggtgcaggg 19258 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 19257 tggactccttctggatgttg 19238 Score = 168 bits (85), Expect = 8e-39 Identities = 214/259 (82%), Gaps = 2/259 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||||| |||| || ||||| |||| ||| ||| Sbjct: 19267 aggtgcagggtggactccttctggatgttgtaatctgcaagggtgcgaccatcctcaagc 19208 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| ||||| ||||||||||||||||| || || || |||| ||||| ||||||| Sbjct: 19207 tgcttgccagcgaagatgaggcgctgctggtctggtggaataccctccttgtcctggatc 19148 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| || |||||||| ||| |||| |||| |||| ||| |||||||||||||| Sbjct: 19147 ttggccttcacattgtcgatcgtgtcagacgactcaacctccagggtgatggtcttgccg 19088 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || |||| |||| || || |||| |||||| |||| ||||||||| |||| ||| | || Sbjct: 19087 gtgaggg-tcttcacgaagatctgcatacctccac-gaaggcggaggaccaagtgcaagg 19030 Query: 351 tngactccttntggatgtt 369 | |||||||| |||||||| Sbjct: 19029 tggactccttctggatgtt 19011 Score = 129 bits (65), Expect = 7e-27 Identities = 209/259 (80%), Gaps = 2/259 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| || | ||| |||||||||| ||||| || |||||||||| ||||||| Sbjct: 18811 aggtgcagggtggattccttttggatgttgtagtctgcaagggtgcggccatcctcgagc 18752 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||| || || || ||||| ||||||||||| || ||||| |||| ||||| ||||||| Sbjct: 18751 tgcttcccagcaaagatgagacgctgctggtctggtgggattccctccttgtcctggatc 18692 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| || || ||||| ||| | ||||||| |||| ||| || ||||||||||| Sbjct: 18691 ttggccttcacattatcgatcgtgtcggaggactcgacctccagggtaatggtcttgccg 18632 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || |||| |||| || || || | ||| || |||| ||||||||| || ||||| | || Sbjct: 18631 gtgaggg-tcttcacgaatatttgcatgcctccac-gaaggcggaggacaaggtgcaagg 18574 Query: 351 tngactccttntggatgtt 369 | |||||||| |||||||| Sbjct: 18573 tggactccttctggatgtt 18555 Score = 115 bits (58), Expect = 1e-22 Identities = 199/248 (80%), Gaps = 2/248 (0%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||| | ||| | || |||||||| | ||| ||||||||||| ||| Sbjct: 19027 gactccttctggatgttatagtcagcaagggtgcggccgtcctcaagctgcttgccagcg 18968 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || ||||| ||||||||||| || || || |||| ||||| ||||||||| ||||| || Sbjct: 18967 aagatgagccgctgctggtctggtggaataccctccttgtcctggatcttggccttcaca 18908 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttctt 302 |||||||| ||| ||||||||| |||| || ||||| |||||||| || |||| |||| Sbjct: 18907 ttgtcgatcgtgtcagaggactcaacctccaaggtgatcgtcttgccagtaaggg-tctt 18849 Query: 303 gacnaanatctncataccaccacanaaggcggagcaccaggtggagggtngactccttnt 362 || || |||| |||||| || | ||||| || || ||||| ||||| || ||||| | Sbjct: 18848 cacaaagatctgcataccgcc-ccggaggcgcaggacaaggtgcagggtggattcctttt 18790 Query: 363 ggatgttg 370 |||||||| Sbjct: 18789 ggatgttg 18782 Score = 95.6 bits (48), Expect = 1e-16 Identities = 142/176 (80%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||| | || | ||||| || |||| ||| ||||||||||| ||| Sbjct: 18571 gactccttctggatgttataatccgcgagagtacgcccatcctcaagctgcttgccagcg 18512 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || || ||||| |||||||||||||||||||||| ||||| ||| ||||| ||||| || Sbjct: 18511 aagataaggcgttgctggtccggagggatgccctccttgtcctgaatcttagccttcaca 18452 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggt 298 ||||| || || | ||| ||| |||| || |||||||||||||| || ||||| Sbjct: 18451 ttgtcaatcgtatcggagaactcaacctccaaggtgatggtcttgccagtgagggt 18396
>gb|BT017060.1| Zea mays clone EL01N0358B03.c mRNA sequence Length = 795 Score = 224 bits (113), Expect = 2e-55 Identities = 171/193 (88%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| || || |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 312 gcaccaggtgcagcgtcgactccttctggatgttgtagtcggcgagggtgcggccatcct 253 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||| || Sbjct: 252 cgagctgcttgccggcgaagatgaggcgctgctggtccggcgggatgccctccttgtcct 193 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| ||||||||||||||| | ||||||| ||||| ||| |||||||||| Sbjct: 192 ggatcttggccttcacgttgtcgatggtgtccgaggactccacctccagcgtgatggtct 133 Query: 286 tgcccgtcagggt 298 | ||||||||||| Sbjct: 132 tccccgtcagggt 120 Score = 56.0 bits (28), Expect = 8e-05 Identities = 38/42 (90%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||||||| || || |||||||| ||||||||| Sbjct: 319 aggcggagcaccaggtgcagcgtcgactccttctggatgttg 278
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 224 bits (113), Expect = 2e-55 Identities = 224/263 (85%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||||||||| |||| |||||||||||||| ||| | | |||||||||| ||| Sbjct: 28020280 accaggtgaagggtggactccttctggatgttgtagtcagccaaggtgcggccatcctcc 28020221 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||||||||| |||||||||||||||||||| ||||| |||| ||||| |||| Sbjct: 28020220 agctgcttgccggcgaagatgaggcgctgctggtccggggggataccctccttgtcctgg 28020161 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||||||||| ||| | ||||||| |||| || |||||||||||| Sbjct: 28020160 atcttggccttcacgttgtcgatcgtgtccgaggactcgacctcaagcgtgatggtcttg 28020101 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| ||||||| || |||| ||||||||| | || | |||||| ||||||| Sbjct: 28020100 ccggtcaggg-tcttgacgaagatctgcataccacc-cctgagcctgagcacaaggtgga 28020043 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 28020042 gggtggactccttctggatgttg 28020020 Score = 198 bits (100), Expect = 9e-48 Identities = 225/269 (83%), Gaps = 2/269 (0%) Strand = Plus / Minus Query: 102 ctangcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggcca 161 ||| |||| ||||| ||||| || | |||||||||||||| ||| | || |||||||| Sbjct: 28019830 ctaagcacaaggtggagggtggattccttctggatgttgtagtcggcaagggtgcggccg 28019771 Query: 162 tnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttg 221 | ||| ||||||||||||||||| ||||| |||||||||||||| |||||||||| |||| Sbjct: 28019770 tcctccagctgcttgccggcgaagatgagacgctgctggtccggggggatgccctccttg 28019711 Query: 222 tnctggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatg 281 | ||||||||| ||||| ||||||||||| ||| | ||||||| |||| || |||||| Sbjct: 28019710 tcctggatcttggccttcacgttgtcgatcgtgtccgaggactcgacctcgagggtgatg 28019651 Query: 282 gtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcacca 341 |||||||| ||||||| ||||||| || |||| |||||| || | || | |||||| | Sbjct: 28019650 gtcttgccggtcaggg-tcttgacgaagatctgcatacctcc-cctgagcctgagcacaa 28019593 Query: 342 ggtggagggtngactccttntggatgttg 370 |||||||||| |||||||| ||||||||| Sbjct: 28019592 ggtggagggtggactccttctggatgttg 28019564 Score = 196 bits (99), Expect = 4e-47 Identities = 222/265 (83%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| |||||||||| |||||||||||||| ||| | || |||||||||| || Sbjct: 28019370 gcacaaggtggagggtagactccttctggatgttgtagtcggccagggtgcggccatcct 28019311 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| ||||| ||||| |||||||||||||| |||||||||| ||||| || Sbjct: 28019310 caagctgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtcct 28019251 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| |||||| |||| |||| |||| || |||||||||| Sbjct: 28019250 ggatcttggccttgacattgtcaatggtgtcagacgactcgacctcaagggtgatggtct 28019191 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| |||| || ||||||| || |||| ||| || || | || | |||||| ||||| Sbjct: 28019190 tgccagtcaagg-tcttgacgaagatctgcatgcctcc-cctgagcctgagcacaaggtg 28019133 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||||| ||||||||| Sbjct: 28019132 gagggtggactccttctggatgttg 28019108 Score = 188 bits (95), Expect = 9e-45 Identities = 221/265 (83%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 28019598 gcacaaggtggagggtggactccttctggatgttgtagtcagcaagggtgcggccatcct 28019539 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| ||||| ||||||||||| || |||||||||| ||||| || Sbjct: 28019538 ccagctgcttgccggcgaagatgagacgctgctggtctggggggatgccctccttgtcct 28019479 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| |||||| |||| |||| |||| || |||||||||| Sbjct: 28019478 ggatcttggccttgacattgtcaatggtgtcagacgactcgacctcaagggtgatggtct 28019419 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| |||| || ||||||| || |||| ||| || || | || | |||||| ||||| Sbjct: 28019418 tgccagtcaagg-tcttgacgaagatctgcatgcctcc-cctgagcctgagcacaaggtg 28019361 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||||| ||||||||| Sbjct: 28019360 gagggtagactccttctggatgttg 28019336 Score = 180 bits (91), Expect = 2e-42 Identities = 220/265 (83%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||| | || Sbjct: 28020054 gcacaaggtggagggtggactccttctggatgttgtagtcggcaagggtgcggccgtcct 28019995 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| ||||| ||||| |||||||||||||| |||||||||| ||||| || Sbjct: 28019994 ccagctgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtcct 28019935 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| || |||||||| ||| | ||||||| |||| ||||||||||||| Sbjct: 28019934 ggatcttggccttcacattgtcgatcgtgtccgaggactcgacctcaagtgtgatggtct 28019875 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| ||||||| ||||||| || |||| |||||| || | || | ||||| ||||| Sbjct: 28019874 tgccagtcaggg-tcttgacgaagatctgcatacctcc-cctgagcctaagcacaaggtg 28019817 Query: 346 gagggtngactccttntggatgttg 370 |||||| || ||||| ||||||||| Sbjct: 28019816 gagggtggattccttctggatgttg 28019792 Score = 161 bits (81), Expect = 2e-36 Identities = 163/193 (84%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 28019142 gcacaaggtggagggtggactccttctggatgttgtagtcggccagggtgcggccatcct 28019083 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| || || ||||| |||||||||||||| |||||||||| ||||| || Sbjct: 28019082 caagctgcttgccagcaaagatgagacgctgctggtccggggggatgccctccttgtcct 28019023 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| |||||| | ||||||| |||| || |||||||||| Sbjct: 28019022 ggatcttggccttgacattgtcaatggtgtccgaggactcaacctcgagggtgatggtct 28018963 Query: 286 tgcccgtcagggt 298 |||| || ||||| Sbjct: 28018962 tgccggtgagggt 28018950 Score = 151 bits (76), Expect = 2e-33 Identities = 234/289 (80%), Gaps = 2/289 (0%) Strand = Plus / Minus Query: 82 cttacttgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgt 141 |||||| ||||||||| |||| |||||||||| || || |||| |||||||||||||| Sbjct: 28020534 cttactggccaccacggaggcggagcaccaggtggagtgtggactccttctggatgttgt 28020475 Query: 142 ngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggt 201 || | || |||||||||| ||| |||||||| || || || || || |||||||||| Sbjct: 28020474 aatccgcaagggtgcggccatcctcaagctgcttaccagcaaagatcagacgctgctggt 28020415 Query: 202 ccggagggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagagg 261 |||| |||||||||| ||||| ||||||||||||||| |||||||| || ||| | || | Sbjct: 28020414 ccggggggatgccctccttgtcctggatcttcgccttcacgttgtcaatagtgtcggacg 28020355 Query: 262 actncaccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncatacca 321 ||| |||| || || ||||||||||| ||||||| |||| || || |||| ||| ||| Sbjct: 28020354 actcaacctcaagggtaatggtcttgccagtcaggg-tcttcacgaagatctgcatccca 28020296 Query: 322 ccacanaaggcggagcaccaggtggagggtngactccttntggatgttg 370 || | || | ||| |||||||| ||||| |||||||| ||||||||| Sbjct: 28020295 cc-cctgagcctgagaaccaggtgaagggtggactccttctggatgttg 28020248 Score = 101 bits (51), Expect = 2e-18 Identities = 210/265 (79%), Gaps = 2/265 (0%) Strand = Plus / Plus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| | ||| |||| |||||| ||||||| || | || || || |||| || Sbjct: 27575236 gcaccaggtgcaaggtggactccttctgaatgttgtaatcagccagtgtacgtccatcct 27575295 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||| | || || |||||||||||||||||||| || || |||| ||||| || Sbjct: 27575296 cgagctgcttgtctgcaaagatgaggcgctgctggtccgggggaattccctccttgtcct 27575355 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 | ||||||||||| || |||||||| || | ||||||| ||| || |||||||||| Sbjct: 27575356 gaatcttcgccttcacattgtcgatcttgtccgaggactcgaccgcaagagtgatggtct 27575415 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 | || |||| || |||| || || |||| ||| || || | ||||| || || ||||| Sbjct: 27575416 ttcctgtcaagg-tcttcacaaagatctgcatgcctcc-cctgaggcgaaggacaaggtg 27575473 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||||| ||||||||| Sbjct: 27575474 gagggtggactccttctggatgttg 27575498 Score = 93.7 bits (47), Expect = 4e-16 Identities = 144/179 (80%) Strand = Plus / Plus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||||| || | || |||||||||| ||| || Sbjct: 27575469 aggtggagggtggactccttctggatgttgtaatccgcgagggtgcggccatcctctagt 27575528 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| || || ||||| || |||||||| || || ||||||| ||||| ||| ||| Sbjct: 27575529 tgcttgccagcaaagatgagacgttgctggtcaggtggaatgccctccttgtcctgaatc 27575588 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcc 289 || ||||| || ||||| || || ||||||||| |||| || |||||||||||||| Sbjct: 27575589 ttggccttcacattgtcaattgtatcagaggactcaacctcgagggtgatggtcttgcc 27575647 Score = 48.1 bits (24), Expect = 0.020 Identities = 37/42 (88%) Strand = Plus / Plus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||||||| | ||| |||||||| || |||||| Sbjct: 27575229 aggcggagcaccaggtgcaaggtggactccttctgaatgttg 27575270 Score = 46.1 bits (23), Expect = 0.080 Identities = 29/31 (93%) Strand = Plus / Minus Query: 224 ctggatcttcgccttgacgttgtcgatggtg 254 ||||||||| |||||||| |||||||||||| Sbjct: 26202145 ctggatcttggccttgacattgtcgatggtg 26202115
>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0547F09 Length = 140615 Score = 224 bits (113), Expect = 2e-55 Identities = 224/263 (85%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||||||||| |||| |||||||||||||| ||| | | |||||||||| ||| Sbjct: 65099 accaggtgaagggtggactccttctggatgttgtagtcagccaaggtgcggccatcctcc 65040 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||||||||| |||||||||||||||||||| ||||| |||| ||||| |||| Sbjct: 65039 agctgcttgccggcgaagatgaggcgctgctggtccggggggataccctccttgtcctgg 64980 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||||||||| ||| | ||||||| |||| || |||||||||||| Sbjct: 64979 atcttggccttcacgttgtcgatcgtgtccgaggactcgacctcaagcgtgatggtcttg 64920 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| ||||||| || |||| ||||||||| | || | |||||| ||||||| Sbjct: 64919 ccggtcaggg-tcttgacgaagatctgcataccacc-cctgagcctgagcacaaggtgga 64862 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 64861 gggtggactccttctggatgttg 64839 Score = 198 bits (100), Expect = 9e-48 Identities = 225/269 (83%), Gaps = 2/269 (0%) Strand = Plus / Minus Query: 102 ctangcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggcca 161 ||| |||| ||||| ||||| || | |||||||||||||| ||| | || |||||||| Sbjct: 64649 ctaagcacaaggtggagggtggattccttctggatgttgtagtcggcaagggtgcggccg 64590 Query: 162 tnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttg 221 | ||| ||||||||||||||||| ||||| |||||||||||||| |||||||||| |||| Sbjct: 64589 tcctccagctgcttgccggcgaagatgagacgctgctggtccggggggatgccctccttg 64530 Query: 222 tnctggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatg 281 | ||||||||| ||||| ||||||||||| ||| | ||||||| |||| || |||||| Sbjct: 64529 tcctggatcttggccttcacgttgtcgatcgtgtccgaggactcgacctcgagggtgatg 64470 Query: 282 gtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcacca 341 |||||||| ||||||| ||||||| || |||| |||||| || | || | |||||| | Sbjct: 64469 gtcttgccggtcaggg-tcttgacgaagatctgcatacctcc-cctgagcctgagcacaa 64412 Query: 342 ggtggagggtngactccttntggatgttg 370 |||||||||| |||||||| ||||||||| Sbjct: 64411 ggtggagggtggactccttctggatgttg 64383 Score = 196 bits (99), Expect = 4e-47 Identities = 222/265 (83%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| |||||||||| |||||||||||||| ||| | || |||||||||| || Sbjct: 64189 gcacaaggtggagggtagactccttctggatgttgtagtcggccagggtgcggccatcct 64130 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| ||||| ||||| |||||||||||||| |||||||||| ||||| || Sbjct: 64129 caagctgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtcct 64070 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| |||||| |||| |||| |||| || |||||||||| Sbjct: 64069 ggatcttggccttgacattgtcaatggtgtcagacgactcgacctcaagggtgatggtct 64010 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| |||| || ||||||| || |||| ||| || || | || | |||||| ||||| Sbjct: 64009 tgccagtcaagg-tcttgacgaagatctgcatgcctcc-cctgagcctgagcacaaggtg 63952 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||||| ||||||||| Sbjct: 63951 gagggtggactccttctggatgttg 63927 Score = 188 bits (95), Expect = 9e-45 Identities = 221/265 (83%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 64417 gcacaaggtggagggtggactccttctggatgttgtagtcagcaagggtgcggccatcct 64358 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| ||||| ||||||||||| || |||||||||| ||||| || Sbjct: 64357 ccagctgcttgccggcgaagatgagacgctgctggtctggggggatgccctccttgtcct 64298 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| |||||| |||| |||| |||| || |||||||||| Sbjct: 64297 ggatcttggccttgacattgtcaatggtgtcagacgactcgacctcaagggtgatggtct 64238 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| |||| || ||||||| || |||| ||| || || | || | |||||| ||||| Sbjct: 64237 tgccagtcaagg-tcttgacgaagatctgcatgcctcc-cctgagcctgagcacaaggtg 64180 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||||| ||||||||| Sbjct: 64179 gagggtagactccttctggatgttg 64155 Score = 180 bits (91), Expect = 2e-42 Identities = 220/265 (83%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||| | || Sbjct: 64873 gcacaaggtggagggtggactccttctggatgttgtagtcggcaagggtgcggccgtcct 64814 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| ||||| ||||| |||||||||||||| |||||||||| ||||| || Sbjct: 64813 ccagctgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtcct 64754 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| || |||||||| ||| | ||||||| |||| ||||||||||||| Sbjct: 64753 ggatcttggccttcacattgtcgatcgtgtccgaggactcgacctcaagtgtgatggtct 64694 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| ||||||| ||||||| || |||| |||||| || | || | ||||| ||||| Sbjct: 64693 tgccagtcaggg-tcttgacgaagatctgcatacctcc-cctgagcctaagcacaaggtg 64636 Query: 346 gagggtngactccttntggatgttg 370 |||||| || ||||| ||||||||| Sbjct: 64635 gagggtggattccttctggatgttg 64611 Score = 161 bits (81), Expect = 2e-36 Identities = 163/193 (84%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 63961 gcacaaggtggagggtggactccttctggatgttgtagtcggccagggtgcggccatcct 63902 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| || || ||||| |||||||||||||| |||||||||| ||||| || Sbjct: 63901 caagctgcttgccagcaaagatgagacgctgctggtccggggggatgccctccttgtcct 63842 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| |||||| | ||||||| |||| || |||||||||| Sbjct: 63841 ggatcttggccttgacattgtcaatggtgtccgaggactcaacctcgagggtgatggtct 63782 Query: 286 tgcccgtcagggt 298 |||| || ||||| Sbjct: 63781 tgccggtgagggt 63769 Score = 151 bits (76), Expect = 2e-33 Identities = 234/289 (80%), Gaps = 2/289 (0%) Strand = Plus / Minus Query: 82 cttacttgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgt 141 |||||| ||||||||| |||| |||||||||| || || |||| |||||||||||||| Sbjct: 65353 cttactggccaccacggaggcggagcaccaggtggagtgtggactccttctggatgttgt 65294 Query: 142 ngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggt 201 || | || |||||||||| ||| |||||||| || || || || || |||||||||| Sbjct: 65293 aatccgcaagggtgcggccatcctcaagctgcttaccagcaaagatcagacgctgctggt 65234 Query: 202 ccggagggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagagg 261 |||| |||||||||| ||||| ||||||||||||||| |||||||| || ||| | || | Sbjct: 65233 ccggggggatgccctccttgtcctggatcttcgccttcacgttgtcaatagtgtcggacg 65174 Query: 262 actncaccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncatacca 321 ||| |||| || || ||||||||||| ||||||| |||| || || |||| ||| ||| Sbjct: 65173 actcaacctcaagggtaatggtcttgccagtcaggg-tcttcacgaagatctgcatccca 65115 Query: 322 ccacanaaggcggagcaccaggtggagggtngactccttntggatgttg 370 || | || | ||| |||||||| ||||| |||||||| ||||||||| Sbjct: 65114 cc-cctgagcctgagaaccaggtgaagggtggactccttctggatgttg 65067
>emb|X92422.1|ZMUBIS27F Z.mays mRNA for ubiquitin/ribosomal protein S27a fusion protein Length = 777 Score = 220 bits (111), Expect = 2e-54 Identities = 169/191 (88%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| || || |||| |||||||||||||| ||| | || |||||||||| |||| Sbjct: 299 accaggtgcagcgtcgactccttctggatgttgtagtcggcgagggtgcggccatcctcg 240 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||||||||| |||||||||||||||||||| |||||||||| ||||| |||| Sbjct: 239 agctgcttgccggcgaagatgaggcgctgctggtccggcgggatgccctccttgtcctgg 180 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||||||||||||| | ||||||| ||||| ||| ||||||||||| Sbjct: 179 atcttggccttcacgttgtcgatggtgtccgaggactccacctccagcgtgatggtcttc 120 Query: 288 cccgtcagggt 298 ||||||||||| Sbjct: 119 cccgtcagggt 109
>dbj|AK121590.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037P03, full insert sequence Length = 1983 Score = 216 bits (109), Expect = 4e-53 Identities = 223/263 (84%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||||||||| |||| |||||||||||||| ||| | | |||||||||| ||| Sbjct: 1420 accaggtgaagggtggactccttctggatgttgtagtcagccaaggtgcggccatcctcc 1361 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||||||||| |||||||||||||||||||| ||||| |||| ||||| |||| Sbjct: 1360 agctgcttgccggcgaagatgaggcgctgctggtccggggggataccctccttgtcctgg 1301 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||||||||| ||| | ||||||| |||| || |||||||||||| Sbjct: 1300 atcttggccttcacgttgtcgatcgtgtccgaggactcgacctcaagcgtgatggtcttg 1241 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| ||||||| || |||| ||||||||| | || | |||||| ||||||| Sbjct: 1240 ccggtcaggg-tcttgacgaagatctgcataccacc-cctgagcctgagcacaaggtgga 1183 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| |||| |||| Sbjct: 1182 gggtggactccttctggacgttg 1160 Score = 198 bits (100), Expect = 9e-48 Identities = 225/269 (83%), Gaps = 2/269 (0%) Strand = Plus / Minus Query: 102 ctangcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggcca 161 ||| |||| ||||| ||||| || | |||||||||||||| ||| | || |||||||| Sbjct: 970 ctaagcacaaggtggagggtggattccttctggatgttgtagtcggcaagggtgcggccg 911 Query: 162 tnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttg 221 | ||| ||||||||||||||||| ||||| |||||||||||||| |||||||||| |||| Sbjct: 910 tcctccagctgcttgccggcgaagatgagacgctgctggtccggggggatgccctccttg 851 Query: 222 tnctggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatg 281 | ||||||||| ||||| ||||||||||| ||| | ||||||| |||| || |||||| Sbjct: 850 tcctggatcttggccttcacgttgtcgatcgtgtccgaggactcgacctcgagggtgatg 791 Query: 282 gtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcacca 341 |||||||| ||||||| ||||||| || |||| |||||| || | || | |||||| | Sbjct: 790 gtcttgccggtcaggg-tcttgacgaagatctgcatacctcc-cctgagcctgagcacaa 733 Query: 342 ggtggagggtngactccttntggatgttg 370 |||||||||| |||||||| ||||||||| Sbjct: 732 ggtggagggtggactccttctggatgttg 704 Score = 196 bits (99), Expect = 4e-47 Identities = 222/265 (83%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| |||||||||| |||||||||||||| ||| | || |||||||||| || Sbjct: 510 gcacaaggtggagggtagactccttctggatgttgtagtcggccagggtgcggccatcct 451 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| ||||| ||||| |||||||||||||| |||||||||| ||||| || Sbjct: 450 caagctgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtcct 391 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| |||||| |||| |||| |||| || |||||||||| Sbjct: 390 ggatcttggccttgacattgtcaatggtgtcagacgactcgacctcaagggtgatggtct 331 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| |||| || ||||||| || |||| ||| || || | || | |||||| ||||| Sbjct: 330 tgccagtcaagg-tcttgacgaagatctgcatgcctcc-cctgagcctgagcacaaggtg 273 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||||| ||||||||| Sbjct: 272 gagggtggactccttctggatgttg 248 Score = 188 bits (95), Expect = 9e-45 Identities = 221/265 (83%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 738 gcacaaggtggagggtggactccttctggatgttgtagtcagcaagggtgcggccatcct 679 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| ||||| ||||||||||| || |||||||||| ||||| || Sbjct: 678 ccagctgcttgccggcgaagatgagacgctgctggtctggggggatgccctccttgtcct 619 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| |||||| |||| |||| |||| || |||||||||| Sbjct: 618 ggatcttggccttgacattgtcaatggtgtcagacgactcgacctcaagggtgatggtct 559 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| |||| || ||||||| || |||| ||| || || | || | |||||| ||||| Sbjct: 558 tgccagtcaagg-tcttgacgaagatctgcatgcctcc-cctgagcctgagcacaaggtg 501 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||||| ||||||||| Sbjct: 500 gagggtagactccttctggatgttg 476 Score = 172 bits (87), Expect = 5e-40 Identities = 219/265 (82%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||| ||||| ||| | || |||||||| | || Sbjct: 1194 gcacaaggtggagggtggactccttctggacgttgtagtcggcaagggtgcggccgtcct 1135 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| ||||| ||||| |||||||||||||| |||||||||| ||||| || Sbjct: 1134 ccagctgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtcct 1075 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| || |||||||| ||| | ||||||| |||| ||||||||||||| Sbjct: 1074 ggatcttggccttcacattgtcgatcgtgtccgaggactcgacctcaagtgtgatggtct 1015 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| ||||||| ||||||| || |||| |||||| || | || | ||||| ||||| Sbjct: 1014 tgccagtcaggg-tcttgacgaagatctgcatacctcc-cctgagcctaagcacaaggtg 957 Query: 346 gagggtngactccttntggatgttg 370 |||||| || ||||| ||||||||| Sbjct: 956 gagggtggattccttctggatgttg 932 Score = 161 bits (81), Expect = 2e-36 Identities = 163/193 (84%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 282 gcacaaggtggagggtggactccttctggatgttgtagtcggccagggtgcggccatcct 223 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| || || ||||| |||||||||||||| |||||||||| ||||| || Sbjct: 222 caagctgcttgccagcaaagatgagacgctgctggtccggggggatgccctccttgtcct 163 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| |||||| | ||||||| |||| || |||||||||| Sbjct: 162 ggatcttggccttgacattgtcaatggtgtccgaggactcaacctcgagggtgatggtct 103 Query: 286 tgcccgtcagggt 298 |||| || ||||| Sbjct: 102 tgccggtgagggt 90 Score = 151 bits (76), Expect = 2e-33 Identities = 234/289 (80%), Gaps = 2/289 (0%) Strand = Plus / Minus Query: 82 cttacttgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgt 141 |||||| ||||||||| |||| |||||||||| || || |||| |||||||||||||| Sbjct: 1674 cttactggccaccacggaggcggagcaccaggtggagtgtggactccttctggatgttgt 1615 Query: 142 ngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggt 201 || | || |||||||||| ||| |||||||| || || || || || |||||||||| Sbjct: 1614 aatccgcaagggtgcggccatcctcaagctgcttaccagcaaagatcagacgctgctggt 1555 Query: 202 ccggagggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagagg 261 |||| |||||||||| ||||| ||||||||||||||| |||||||| || ||| | || | Sbjct: 1554 ccggggggatgccctccttgtcctggatcttcgccttcacgttgtcaatagtgtcggacg 1495 Query: 262 actncaccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncatacca 321 ||| |||| || || ||||||||||| ||||||| |||| || || |||| ||| ||| Sbjct: 1494 actcaacctcaagggtaatggtcttgccagtcaggg-tcttcacgaatatctgcatccca 1436 Query: 322 ccacanaaggcggagcaccaggtggagggtngactccttntggatgttg 370 || | || | ||| |||||||| ||||| |||||||| ||||||||| Sbjct: 1435 cc-cctgagcctgagaaccaggtgaagggtggactccttctggatgttg 1388
>gb|AY103568.1| Zea mays PCO110021 mRNA sequence Length = 865 Score = 216 bits (109), Expect = 4e-53 Identities = 170/193 (88%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| || || |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 356 gcaccaggtgcagcgtcgactccttctggatgttgtagtcggcgagggtgcggccatcct 297 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||| ||||||||||| |||||||||||||||||||| |||||||||| ||||| || Sbjct: 296 cgagctgtttgccggcgaagatgaggcgctgctggtccggcgggatgccctccttgtcct 237 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| ||||||||||||||| | ||||||| ||||| ||| |||||||||| Sbjct: 236 ggatcttggccttcacgttgtcgatggtgtccgaggactccacctccagcgtgatggtct 177 Query: 286 tgcccgtcagggt 298 | ||||||||||| Sbjct: 176 tccccgtcagggt 164 Score = 56.0 bits (28), Expect = 8e-05 Identities = 38/42 (90%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||||||| || || |||||||| ||||||||| Sbjct: 363 aggcggagcaccaggtgcagcgtcgactccttctggatgttg 322
>ref|XM_475630.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 468 Score = 208 bits (105), Expect = 9e-51 Identities = 169/193 (87%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 211 gcacgaggtggagggtggactccttctggatgttgtagtcggcgagggtgcggccatcct 152 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||||||||| |||||||||||||||||||| ||||| || | ||||| || Sbjct: 151 cgagctgcttgccggcgaagatgaggcgctgctggtccggggggatcccttccttgtcct 92 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| ||||||||||||||| | ||||||| ||||| ||| |||||||||| Sbjct: 91 ggatcttggccttcacgttgtcgatggtgtccgaggactccacctccagcgtgatggtct 32 Query: 286 tgcccgtcagggt 298 | ||||||||||| Sbjct: 31 tccccgtcagggt 19 Score = 63.9 bits (32), Expect = 3e-07 Identities = 39/42 (92%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 218 aggcggagcacgaggtggagggtggactccttctggatgttg 177
>gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017J22, complete sequence Length = 177153 Score = 208 bits (105), Expect = 9e-51 Identities = 169/193 (87%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 104709 gcacgaggtggagggtggactccttctggatgttgtagtcggcgagggtgcggccatcct 104650 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||||||||| |||||||||||||||||||| ||||| || | ||||| || Sbjct: 104649 cgagctgcttgccggcgaagatgaggcgctgctggtccggggggatcccttccttgtcct 104590 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| ||||||||||||||| | ||||||| ||||| ||| |||||||||| Sbjct: 104589 ggatcttggccttcacgttgtcgatggtgtccgaggactccacctccagcgtgatggtct 104530 Query: 286 tgcccgtcagggt 298 | ||||||||||| Sbjct: 104529 tccccgtcagggt 104517 Score = 63.9 bits (32), Expect = 3e-07 Identities = 39/42 (92%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 104716 aggcggagcacgaggtggagggtggactccttctggatgttg 104675
>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0034O12, complete sequence Length = 156263 Score = 208 bits (105), Expect = 9e-51 Identities = 169/193 (87%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 40858 gcacgaggtggagggtggactccttctggatgttgtagtcggcgagggtgcggccatcct 40799 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||||||||| |||||||||||||||||||| ||||| || | ||||| || Sbjct: 40798 cgagctgcttgccggcgaagatgaggcgctgctggtccggggggatcccttccttgtcct 40739 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| ||||||||||||||| | ||||||| ||||| ||| |||||||||| Sbjct: 40738 ggatcttggccttcacgttgtcgatggtgtccgaggactccacctccagcgtgatggtct 40679 Query: 286 tgcccgtcagggt 298 | ||||||||||| Sbjct: 40678 tccccgtcagggt 40666 Score = 63.9 bits (32), Expect = 3e-07 Identities = 39/42 (92%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 40865 aggcggagcacgaggtggagggtggactccttctggatgttg 40824
>gb|AC104276.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1231_F08, complete sequence Length = 118049 Score = 208 bits (105), Expect = 9e-51 Identities = 169/193 (87%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 42509 gcacgaggtggagggtggactccttctggatgttgtagtcggcgagggtgcggccatcct 42450 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||||||||| |||||||||||||||||||| ||||| || | ||||| || Sbjct: 42449 cgagctgcttgccggcgaagatgaggcgctgctggtccggggggatcccttccttgtcct 42390 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| ||||||||||||||| | ||||||| ||||| ||| |||||||||| Sbjct: 42389 ggatcttggccttcacgttgtcgatggtgtccgaggactccacctccagcgtgatggtct 42330 Query: 286 tgcccgtcagggt 298 | ||||||||||| Sbjct: 42329 tccccgtcagggt 42317 Score = 63.9 bits (32), Expect = 3e-07 Identities = 39/42 (92%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 42516 aggcggagcacgaggtggagggtggactccttctggatgttg 42475
>emb|X76064.1|OSPOLUBI O.sativa rub1 mRNA for polyubiquitin Length = 1673 Score = 208 bits (105), Expect = 9e-51 Identities = 222/263 (84%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||||||||| |||| |||||||||||||| ||| | | |||||||||| ||| Sbjct: 1165 accaggtgaagggtggactccttctggatgttgtagtcagccaaggtgcggccatcctcc 1106 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||||||||| ||||| |||||||||||||| ||||| |||| ||||| |||| Sbjct: 1105 agctgcttgccggcgaagatgagacgctgctggtccggggggataccctccttgtcctgg 1046 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || |||||||| ||| | ||||||| |||| || |||||||||||| Sbjct: 1045 atcttggccttcacattgtcgatcgtgtccgaggactcgacctcaagcgtgatggtcttg 986 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| ||||||| || |||| ||||||||| | || | |||||| ||||||| Sbjct: 985 ccggtcaggg-tcttgacgaagatctgcataccacc-cctgagcctgagcacaaggtgga 928 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 927 gggtggactccttctggatgttg 905 Score = 196 bits (99), Expect = 4e-47 Identities = 222/265 (83%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 939 gcacaaggtggagggtggactccttctggatgttgtagtcggcaagggtgcggccatcct 880 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| || || ||||| |||||||||||||| |||||||||| ||||| || Sbjct: 879 ccagctgcttgccagcaaagatgagacgctgctggtccggggggatgccctccttgtcct 820 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| ||||||||||| ||| | ||||||| |||| || |||||||||| Sbjct: 819 ggatcttggccttcacgttgtcgatcgtgtccgaggactcgacctcgagggtgatggtct 760 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| ||||||| ||||||| || |||| |||||| || | || | |||||| ||||| Sbjct: 759 tgccggtcaggg-tcttgacgaagatctgcatacctcc-cctgagcctgagcacaaggtg 702 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||||| ||||||||| Sbjct: 701 gagggtggactccttctggatgttg 677 Score = 188 bits (95), Expect = 9e-45 Identities = 221/265 (83%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 711 gcacaaggtggagggtggactccttctggatgttgtagtcagcaagggtgcggccatcct 652 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| ||||| ||||||||||| || |||||||||| ||||| || Sbjct: 651 ccagctgcttgccggcgaagatgagacgctgctggtctggggggatgccctccttgtcct 592 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| |||||| |||| |||| |||| || |||||||||| Sbjct: 591 ggatcttggccttgacattgtcaatggtgtcagacgactcgacctcaagggtgatggtct 532 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| |||| || ||||||| || |||| ||| || || | || | |||||| ||||| Sbjct: 531 tgccagtcaagg-tcttgacgaagatctgcatgcctcc-cctgagcctgagcacaaggtg 474 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||||| ||||||||| Sbjct: 473 gagggtggactccttctggatgttg 449 Score = 188 bits (95), Expect = 9e-45 Identities = 221/265 (83%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 483 gcacaaggtggagggtggactccttctggatgttgtagtcagccagggtgcggccatcct 424 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| ||||| ||||| |||||||||||||| |||||||||| ||||| || Sbjct: 423 caagctgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtcct 364 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| |||||| |||| |||| |||| || |||||||||| Sbjct: 363 ggatcttggccttgacattgtcaatggtgtcagacgactcgacctcaagggtgatggtct 304 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| |||| || ||||||| || |||| ||| || || | || | |||||| ||||| Sbjct: 303 tgccagtcaagg-tcttgacgaagatctgcatgcctcc-cctgagcctgagcacaaggtg 246 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||||| ||||||||| Sbjct: 245 gagggtggactccttctggatgttg 221 Score = 176 bits (89), Expect = 3e-41 Identities = 165/193 (85%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 255 gcacaaggtggagggtggactccttctggatgttgtagtcggccagggtgcggccatcct 196 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| ||||| ||||| |||||||||||||| |||||||||| ||||| || Sbjct: 195 caagctgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtcct 136 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| |||||| | ||||||| |||| || |||||||||| Sbjct: 135 ggatcttggccttgacattgtcaatggtgtccgaggactcaacctcgagggtgatggtct 76 Query: 286 tgcccgtcagggt 298 ||||||| ||||| Sbjct: 75 tgcccgtgagggt 63 Score = 135 bits (68), Expect = 1e-28 Identities = 232/289 (80%), Gaps = 2/289 (0%) Strand = Plus / Minus Query: 82 cttacttgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgt 141 |||||| ||||||||| |||| | |||||||| || || |||| |||||||||||||| Sbjct: 1419 cttactggccaccacggaggcgcagaaccaggtggagtgtggactccttctggatgttgt 1360 Query: 142 ngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggt 201 || | | |||||||||| ||| |||||||| || || || || || |||||||||| Sbjct: 1359 aatccgccaaggtgcggccatcctcaagctgcttaccagcaaagatcagacgctgctggt 1300 Query: 202 ccggagggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagagg 261 |||| |||||||||| ||||| ||||||||||||||| |||||||| || ||| | || | Sbjct: 1299 ccggggggatgccctccttgtcctggatcttcgccttcacgttgtcaatagtgtcggacg 1240 Query: 262 actncaccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncatacca 321 ||| |||| || || ||||||||||| ||||||| |||| || || |||| ||| ||| Sbjct: 1239 actcaacctcaagggtaatggtcttgccagtcaggg-tcttcacgaagatctgcatccca 1181 Query: 322 ccacanaaggcggagcaccaggtggagggtngactccttntggatgttg 370 || | || | ||| |||||||| ||||| |||||||| ||||||||| Sbjct: 1180 cc-cctgagcctgagaaccaggtgaagggtggactccttctggatgttg 1133
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 208 bits (105), Expect = 9e-51 Identities = 169/193 (87%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 3475227 gcacgaggtggagggtggactccttctggatgttgtagtcggcgagggtgcggccatcct 3475168 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||||||||| |||||||||||||||||||| ||||| || | ||||| || Sbjct: 3475167 cgagctgcttgccggcgaagatgaggcgctgctggtccggggggatcccttccttgtcct 3475108 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| ||||||||||||||| | ||||||| ||||| ||| |||||||||| Sbjct: 3475107 ggatcttggccttcacgttgtcgatggtgtccgaggactccacctccagcgtgatggtct 3475048 Query: 286 tgcccgtcagggt 298 | ||||||||||| Sbjct: 3475047 tccccgtcagggt 3475035 Score = 133 bits (67), Expect = 4e-28 Identities = 115/133 (86%) Strand = Plus / Plus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| |||||||||||||||| ||||||||| |||| ||| | || ||||| || | || Sbjct: 8544841 gcactaggtgaagggtagactccttctggatattgtagtcagccagggtgcgtccgtcct 8544900 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 |||||||||||||||||| |||||||||||||||||||| |||||||||| ||||| || Sbjct: 8544901 tgagctgcttgccggcgaagatgaggcgctgctggtccggggggatgccctccttgtcct 8544960 Query: 226 ggatcttcgcctt 238 ||||||||||| Sbjct: 8544961 aaatcttcgcctt 8544973 Score = 81.8 bits (41), Expect = 1e-12 Identities = 124/154 (80%) Strand = Plus / Plus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| ||||| ||||||| |||| || ||||| || | ||| || Sbjct: 8545305 aggtggagggtggactctttctgaatgttgtaatctgcgagggtgcgtccgtcctcaagt 8545364 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| || || ||||||||||||||||| || || || |||| ||||| ||| ||| Sbjct: 8545365 tgcttgcccgcaaagatgaggcgctgctggtcaggtggaataccctccttgtcctgaatc 8545424 Query: 231 ttcgccttgacgttgtcgatggtgncagaggact 264 || |||||||| ||||| || ||| ||||||||| Sbjct: 8545425 ttggccttgacattgtcaatcgtgtcagaggact 8545458 Score = 81.8 bits (41), Expect = 1e-12 Identities = 113/139 (81%) Strand = Plus / Plus Query: 109 ccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcga 168 ||||||| | ||| |||| |||||||||||||| ||| | |||||||||| ||||| Sbjct: 8544616 ccaggtgcaaggtggactccttctggatgttgtaacctgctaaggtgcggccatcctcga 8544675 Query: 169 gctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgga 228 |||||||||| || || || || |||||||| ||||| || ||||||| ||||| ||| | Sbjct: 8544676 gctgcttgccagcaaagatcagtcgctgctgatccgggggaatgccctccttgtcctgaa 8544735 Query: 229 tcttcgccttgacgttgtc 247 |||| || || |||||||| Sbjct: 8544736 tctttgctttcacgttgtc 8544754 Score = 67.9 bits (34), Expect = 2e-08 Identities = 87/106 (82%) Strand = Plus / Plus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 ||||||||||||| || |||| |||||||||||||| ||| | || |||| ||| | | Sbjct: 22310764 gcaccaggtgaagcgtcgactccttctggatgttgtagtcggccagcgtgcagccgtctt 22310823 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggat 211 | |||||||| || ||||| ||||| |||||||| ||||| ||||| Sbjct: 22310824 ccagctgcttccccgcgaagatgagccgctgctgatccggcgggat 22310869 Score = 63.9 bits (32), Expect = 3e-07 Identities = 39/42 (92%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 3475234 aggcggagcacgaggtggagggtggactccttctggatgttg 3475193 Score = 56.0 bits (28), Expect = 8e-05 Identities = 38/42 (90%) Strand = Plus / Plus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||||||| || || |||||||| ||||||||| Sbjct: 22310757 aggcggagcaccaggtgaagcgtcgactccttctggatgttg 22310798 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 225 tggatcttcgccttgacgttgtcgatggtg 254 |||||||| |||||||||||||| |||||| Sbjct: 22312059 tggatcttggccttgacgttgtctatggtg 22312088
>gb|AF184279.1|AF184279 Oryza sativa polyubiquitin (RUBQ1) gene, complete cds Length = 3184 Score = 208 bits (105), Expect = 9e-51 Identities = 222/263 (84%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||||||||| |||| |||||||||||||| ||| | | |||||||||| ||| Sbjct: 2822 accaggtgaagggtggactccttctggatgttgtagtcagccaaggtgcggccatcctca 2763 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||||||||| ||||| |||||||||||||| ||||| |||| ||||| |||| Sbjct: 2762 agctgcttgccggcgaagatgagacgctgctggtccggggggataccctccttgtcctgg 2703 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || |||||||| ||| | ||||||| |||| || |||||||||||| Sbjct: 2702 atcttggccttcacattgtcgatcgtgtccgaggactcgacctcaagcgtgatggtcttg 2643 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| ||||||| || |||| ||||||||| | || | |||||| ||||||| Sbjct: 2642 ccggtcaggg-tcttgacgaagatctgcataccacc-cctgagcctgagcacaaggtgga 2585 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 2584 gggtggactccttctggatgttg 2562 Score = 188 bits (95), Expect = 9e-45 Identities = 221/265 (83%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 2368 gcacaaggtggagggtggactccttctggatgttgtagtcagcaagggtgcggccatcct 2309 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| ||||| ||||||||||| || |||||||||| ||||| || Sbjct: 2308 ccagctgcttgccggcgaagatgagacgctgctggtctggggggatgccctccttgtcct 2249 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| |||||| |||| |||| |||| || |||||||||| Sbjct: 2248 ggatcttggccttgacattgtcaatggtgtcagacgactcgacctcgagggtgatggtct 2189 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| |||| || ||||||| || |||| ||| || || | || | |||||| ||||| Sbjct: 2188 tgccagtcaagg-tcttgacgaagatctgcatgcctcc-cctgagcctgagcacaaggtg 2131 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||||| ||||||||| Sbjct: 2130 gagggtggactccttctggatgttg 2106 Score = 188 bits (95), Expect = 9e-45 Identities = 221/265 (83%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 2140 gcacaaggtggagggtggactccttctggatgttgtagtcagccagggtgcggccatcct 2081 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| ||||| ||||| |||||||||||||| |||||||||| ||||| || Sbjct: 2080 caagctgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtcct 2021 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| |||||| |||| |||| |||| || |||||||||| Sbjct: 2020 ggatcttggccttgacattgtcaatggtgtcagacgactcgacctcaagggtgatggtct 1961 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| |||| || ||||||| || |||| ||| || || | || | |||||| ||||| Sbjct: 1960 tgccagtcaagg-tcttgacgaagatctgcatgcctcc-cctgagcctgagcacaaggtg 1903 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||||| ||||||||| Sbjct: 1902 gagggtggactccttctggatgttg 1878 Score = 180 bits (91), Expect = 2e-42 Identities = 220/265 (83%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 2596 gcacaaggtggagggtggactccttctggatgttgtagtcggcaagggtgcggccatcct 2537 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| || || ||||| |||||||||||||| |||||||||| ||||| || Sbjct: 2536 ccagctgcttgccagcaaagatgagacgctgctggtccggggggatgccctccttgtcct 2477 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| || || || |||||||| ||| | ||||||| |||| || |||||||||| Sbjct: 2476 ggatcttggctttcacattgtcgatcgtgtccgaggactcgacctcgagggtgatggtct 2417 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| ||||||| ||||||| || |||| |||||| || | || | |||||| ||||| Sbjct: 2416 tgccggtcaggg-tcttgacgaagatctgcatacctcc-cctgagcctgagcacaaggtg 2359 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||||| ||||||||| Sbjct: 2358 gagggtggactccttctggatgttg 2334 Score = 168 bits (85), Expect = 8e-39 Identities = 164/193 (84%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 1912 gcacaaggtggagggtggactccttctggatgttgtagtcggccagggtgcggccatcct 1853 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| ||||| ||||| |||||||||||||| |||||||||| ||||| || Sbjct: 1852 caagctgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtcct 1793 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| |||||| | ||||||| |||| || |||||||||| Sbjct: 1792 ggatcttggccttgacattgtcaatggtgtccgaggactcaacctcgagggtgatggtct 1733 Query: 286 tgcccgtcagggt 298 |||| || ||||| Sbjct: 1732 tgccggtgagggt 1720 Score = 135 bits (68), Expect = 1e-28 Identities = 232/289 (80%), Gaps = 2/289 (0%) Strand = Plus / Minus Query: 82 cttacttgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgt 141 |||||| ||||||||| |||| | |||||||| || || |||| |||||||||||||| Sbjct: 3076 cttactggccaccacggaggcgcagaaccaggtggagtgtggactccttctggatgttgt 3017 Query: 142 ngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggt 201 || | | |||||||||| ||| |||||||| || || || || || |||||||||| Sbjct: 3016 aatccgccaaggtgcggccatcctcaagctgcttaccagcaaagatcagacgctgctggt 2957 Query: 202 ccggagggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagagg 261 |||| |||||||||| ||||| ||||||||||||||| |||||||| || ||| | || | Sbjct: 2956 ccggggggatgccctccttgtcctggatcttcgccttcacgttgtcaatagtgtcggacg 2897 Query: 262 actncaccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncatacca 321 ||| |||| || || ||||||||||| ||||||| |||| || || |||| ||| ||| Sbjct: 2896 actcaacctcaagggtaatggtcttgccagtcaggg-tcttcacgaagatctgcatccca 2838 Query: 322 ccacanaaggcggagcaccaggtggagggtngactccttntggatgttg 370 || | || | ||| |||||||| ||||| |||||||| ||||||||| Sbjct: 2837 cc-cctgagcctgagaaccaggtgaagggtggactccttctggatgttg 2790
>dbj|AK119731.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-158-A01, full insert sequence Length = 735 Score = 208 bits (105), Expect = 9e-51 Identities = 169/193 (87%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 281 gcacgaggtggagggtggactccttctggatgttgtagtcggcgagggtgcggccatcct 222 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||||||||| |||||||||||||||||||| ||||| || | ||||| || Sbjct: 221 cgagctgcttgccggcgaagatgaggcgctgctggtccggggggatcccttccttgtcct 162 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| ||||||||||||||| | ||||||| ||||| ||| |||||||||| Sbjct: 161 ggatcttggccttcacgttgtcgatggtgtccgaggactccacctccagcgtgatggtct 102 Query: 286 tgcccgtcagggt 298 | ||||||||||| Sbjct: 101 tccccgtcagggt 89 Score = 63.9 bits (32), Expect = 3e-07 Identities = 39/42 (92%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 288 aggcggagcacgaggtggagggtggactccttctggatgttg 247
>gb|U37687.1|OSU37687 Oryza sativa polyubiquitin (Rubq1) mRNA, complete cds Length = 1679 Score = 196 bits (99), Expect = 4e-47 Identities = 222/265 (83%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 720 gcacaaggtggagggtggactccttctggatgttgtagtcagcaagggtgcggccatcct 661 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| ||||| ||||||||||| || |||||||||| ||||| || Sbjct: 660 ccagctgcttgccggcgaagatgagacgctgctggtctggggggatgccctccttgtcct 601 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| |||||| |||| |||| |||| || |||||||||| Sbjct: 600 ggatcttggccttgacattgtcaatggtgtcagacgactcgacctcgagggtgatggtct 541 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| |||| || ||||||| || |||| |||||| || | || | |||||| ||||| Sbjct: 540 tgccagtcaagg-tcttgacgaagatctgcatacctcc-cctgagcctgagcacaaggtg 483 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||||| ||||||||| Sbjct: 482 gagggtggactccttctggatgttg 458 Score = 192 bits (97), Expect = 6e-46 Identities = 220/263 (83%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||||||||| |||| |||||||||||||| ||| | | |||||||||| ||| Sbjct: 946 accaggtgaagggtggactccttctggatgttgtagtcagccaaggtgcggccatcctcc 887 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||||||||| ||||| |||||||||||||| ||||| |||| ||||| |||| Sbjct: 886 agctgcttgccggcgaagatgagacgctgctggtccggggggataccctccttgtcctgg 827 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| || || || |||||||| ||| | ||||||| |||| || |||||||||||| Sbjct: 826 atcttggctttcacattgtcgatcgtgtccgaggactcgacctcgagggtgatggtcttg 767 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| ||||||| || |||| |||||| || | || | |||||| ||||||| Sbjct: 766 ccggtcaggg-tcttgacgaagatctgcatacctcc-cctgagcctgagcacaaggtgga 709 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 708 gggtggactccttctggatgttg 686 Score = 184 bits (93), Expect = 1e-43 Identities = 219/263 (83%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||||||||| |||| |||||||||||||| ||| | | |||||||||| ||| Sbjct: 1174 accaggtgaagggtggactccttctggatgttgtagtcagccaaggtgcggccatcctcc 1115 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||||||||| ||||| |||||||||||||| |||||||||| ||||| |||| Sbjct: 1114 agctgcttgccggcgaagatgagacgctgctggtccggggggatgccctccttgtcctgg 1055 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||||||||| |||||||| || ||| | || |||| |||| || || ||||||||| Sbjct: 1054 atcttcgccttcacgttgtcaatagtgtcggacgactcaacctcaagggtaatggtcttg 995 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | || | ||| |||||||| | Sbjct: 994 ccagtcaggg-tcttcacgaagatctgcatcccacc-cctgagcctgagtaccaggtgaa 937 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 936 gggtggactccttctggatgttg 914 Score = 180 bits (91), Expect = 2e-42 Identities = 220/265 (83%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 492 gcacaaggtggagggtggactccttctggatgttgtagtcagccagggtgcggccatcct 433 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| ||||| ||||| |||||||||||||| |||||||||| ||||| || Sbjct: 432 caagctgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtcct 373 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| |||||| |||| |||| |||| || |||||||||| Sbjct: 372 ggatcttggccttgacattgtcaatggtgtcagacgactcgacctcaagggtgatggtct 313 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| |||| || ||||||| || |||| ||| || || | || | ||| || ||||| Sbjct: 312 tgccagtcaagg-tcttgacgaagatctgcatgcctcc-cctgagcctgaggacaaggtg 255 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||||| ||||||||| Sbjct: 254 gagggtggactccttctggatgttg 230 Score = 167 bits (84), Expect = 3e-38 Identities = 160/188 (85%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||||| ||| | || |||||||||| ||| ||| Sbjct: 259 aggtggagggtggactccttctggatgttgtagtcggccagggtgcggccatcctcaagc 200 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| ||||| ||||| |||||||||||||| |||||||||| ||||| ||||||| Sbjct: 199 tgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtcctggatc 140 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || |||||||| ||||| |||||| | ||||||| |||| || |||||||||||||| Sbjct: 139 ttggccttgacattgtcaatggtgtccgaggactcaacctcgagggtgatggtcttgccg 80 Query: 291 gtcagggt 298 || ||||| Sbjct: 79 gtgagggt 72 Score = 135 bits (68), Expect = 1e-28 Identities = 232/289 (80%), Gaps = 2/289 (0%) Strand = Plus / Minus Query: 82 cttacttgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgt 141 |||||| ||||||||| |||| | |||||||| || || |||| |||||||||||||| Sbjct: 1428 cttactggccaccacggaggcggaggaccaggtggagtgtggactccttctggatgttgt 1369 Query: 142 ngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggt 201 || | | |||||||||| ||| |||||||| || || || || || |||||||||| Sbjct: 1368 aatccgccaaggtgcggccatcctcaagctgcttaccagcaaagatcagacgctgctggt 1309 Query: 202 ccggagggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagagg 261 |||| |||||||||| ||||| ||||||||||||||| |||||||| || ||| | || | Sbjct: 1308 ccggggggatgccctccttgtcctggatcttcgccttcacgttgtcaatagtgtcggacg 1249 Query: 262 actncaccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncatacca 321 ||| |||| || || ||||||||||| ||||||| |||| || || |||| ||| ||| Sbjct: 1248 actcaacctcaagggtaatggtcttgccagtcaggg-tcttcacgaagatctgcatccca 1190 Query: 322 ccacanaaggcggagcaccaggtggagggtngactccttntggatgttg 370 || | || | ||| |||||||| ||||| |||||||| ||||||||| Sbjct: 1189 cc-cctgagcctgagaaccaggtgaagggtggactccttctggatgttg 1142
>gb|AF148448.1|AF148448 Sporobolus stapfianus polyubiquitin mRNA, complete cds Length = 1423 Score = 194 bits (98), Expect = 1e-46 Identities = 218/260 (83%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||||| ||| | || |||||||||| ||| ||| Sbjct: 955 aggtggagggtggactccttctggatgttgtagtcggcgagggtgcggccatcctcaagc 896 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| ||||| ||||| |||||||||||||| |||||||||| ||||| ||||||| Sbjct: 895 tgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttgtcctggatc 836 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| ||||||||||||||| | ||||||| ||||| || |||||||||||||| Sbjct: 835 ttggccttcacgttgtcgatggtgtccgaggactccacctcaagggtgatggtcttgccg 776 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || |||| |||| || || |||| ||| ||||| | || | ||| || |||||||||| Sbjct: 775 gtgaggg-tcttcacaaagatctgcatgccacc-cctgagcctgaggacaaggtggaggg 718 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 717 tggactccttctggatgttg 698 Score = 190 bits (96), Expect = 2e-45 Identities = 239/289 (82%), Gaps = 2/289 (0%) Strand = Plus / Minus Query: 82 cttacttgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgt 141 |||||| ||||||||| || | | |||||||||| ||||| |||| |||||||||||||| Sbjct: 1212 cttactggccaccacggagacgaagcaccaggtggagggtggactccttctggatgttgt 1153 Query: 142 ngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggt 201 || | || |||||||||| ||| ||||||||||| || || || || |||||||||| Sbjct: 1152 aatccgccagggtgcggccatcctccagctgcttgccagcaaagatcagacgctgctggt 1093 Query: 202 ccggagggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagagg 261 |||| |||||||||| ||||| ||||||||| ||||| || |||||||||||| |||| | Sbjct: 1092 ccggcgggatgccctccttgtcctggatctttgccttaacattgtcgatggtgtcagatg 1033 Query: 262 actncaccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncatacca 321 ||| ||||| ||| |||||||||||||| || |||| ||||||| || |||| ||| ||| Sbjct: 1032 actccacctccagggtgatggtcttgccagtgaggg-tcttgacaaaaatctgcatgcca 974 Query: 322 ccacanaaggcggagcaccaggtggagggtngactccttntggatgttg 370 || | || | || || ||||||||||| |||||||| ||||||||| Sbjct: 973 cc-cctgagcctcaggacgaggtggagggtggactccttctggatgttg 926 Score = 163 bits (82), Expect = 5e-37 Identities = 214/260 (82%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||||| || | || || ||||| | ||| ||| Sbjct: 727 aggtggagggtggactccttctggatgttgtaatcagcaagggtacggccgtcctcaagc 668 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||| || ||||| ||||| ||||||||||||||||||||||| | ||||| ||||||| Sbjct: 667 tgcttcccagcgaagatgagacgctgctggtccggagggatgccttccttgtcctggatc 608 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| ||||||||||||||| | ||||||| ||||| || |||||||||||||| Sbjct: 607 ttggccttcacgttgtcgatggtgtccgaggactccacctcaagcgtgatggtcttgccg 548 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || |||| |||| || || |||| ||| ||||| | || | || ||||||||||||| Sbjct: 547 gtgaggg-tcttcacgaagatctgcatgccacc-cctgagcctcaggaccaggtggaggg 490 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 489 tggactccttctggatgttg 470 Score = 161 bits (81), Expect = 2e-36 Identities = 216/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || || ||||| | ||| Sbjct: 502 accaggtggagggtggactccttctggatgttgtagtcagcaagggtacggccgtcctca 443 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||| || ||||| ||||| |||||||||||||| || ||||||| ||||| |||| Sbjct: 442 agctgcttcccagcgaagatgagacgctgctggtccgggggaatgccctccttgtcctgg 383 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||||||||||||| | ||||||| ||||| || |||||||||||| Sbjct: 382 atcttggccttcacgttgtcgatggtgtccgaggactccacctcaagcgtgatggtcttg 323 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || || |||| |||| || || |||| ||| || || | || | ||| || ||||||| Sbjct: 322 ccggtgaggg-tcttcacgaagatctgcatgcctcc-cctgagcctgaggacaaggtgga 265 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 264 gggtggactccttctggatgttg 242 Score = 127 bits (64), Expect = 3e-26 Identities = 155/188 (82%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||||| || | || || ||||| | ||| ||| Sbjct: 271 aggtggagggtggactccttctggatgttgtaatcagcaagggtacggccgtcctcaagc 212 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||| || ||||| ||||| |||||||||||||| ||||| |||| ||||| ||||||| Sbjct: 211 tgcttcccagcgaagatgagacgctgctggtccggggggattccctccttgtcctggatc 152 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || |||||||||||||| ||||| | ||||||| |||| || |||||||||||||| Sbjct: 151 tttgccttgacgttgtcaatggtatccgaggactcaacctcgagggtgatggtcttgccg 92 Query: 291 gtcagggt 298 || ||||| Sbjct: 91 gtgagggt 84
>dbj|AK067024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091J24, full insert sequence Length = 1189 Score = 194 bits (98), Expect = 1e-46 Identities = 218/260 (83%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 |||||||| || |||| |||||||||||||| ||| | || || | ||| | ||| ||| Sbjct: 744 aggtgaagcgttgactccttctggatgttgtagtcagcaagggtcctgccgtcctcaagc 685 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||||||||| || ||||| |||||||||||||| || ||||||| ||||| ||||||| Sbjct: 684 tgcttgccggcaaagatgagacgctgctggtccgggggaatgccctccttgtcctggatc 625 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||||||||||||||||||| |||| || | ||||| || |||||||||||||| Sbjct: 624 ttggccttgacgttgtcgatggtgtcagaagattccacctcgagggtgatggtcttgccg 565 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 ||||| | ||||||| || |||| ||| ||||||| |||||||| || |||||||||| Sbjct: 564 gtcagtg-tcttgacaaagatctgcatgccaccac-ggaggcggaggacaaggtggaggg 507 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 506 tggactccttctggatgttg 487 Score = 194 bits (98), Expect = 1e-46 Identities = 218/260 (83%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||||| ||| | || || | ||||| ||| ||| Sbjct: 516 aggtggagggtggactccttctggatgttgtagtcagcaagggtcctgccatcctccagc 457 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||||||||| ||||| ||||||||||| || |||||||||| |||| ||||||| Sbjct: 456 tgcttgccggcgaagatgagacgctgctggtctggggggatgccctctttgtcctggatc 397 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||||||||||||||||||| |||| |||| ||||| || ||||| |||||||| Sbjct: 396 ttggccttgacgttgtcgatggtgtcagaagactccacctcaagggtgatagtcttgccg 337 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 ||||| | ||||||| || |||| ||| ||||||| |||||||| || ||||| |||| Sbjct: 336 gtcagag-tcttgacaaagatctgcatgccaccac-ggaggcggaggacaaggtgaaggg 279 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 278 tcgactccttctggatgttg 259 Score = 151 bits (76), Expect = 2e-33 Identities = 155/184 (84%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||||||||| |||| |||||||||||||| ||| | || || | ||||| ||| ||| Sbjct: 288 aggtgaagggtcgactccttctggatgttgtagtcagcaagggtcctgccatcctccagc 229 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| ||||| ||||| |||||||||||||| |||||||||| ||| | |||||| Sbjct: 228 tgcttgccagcgaagatgagacgctgctggtccggggggatgccctccttatcttggatc 169 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || |||||||| || ||||||||| ||||||||| ||||| || ||||| |||||||| Sbjct: 168 ttagccttgacattatcgatggtgtcagaggactccacctcgagggtgatagtcttgccg 109 Query: 291 gtca 294 |||| Sbjct: 108 gtca 105 Score = 145 bits (73), Expect = 1e-31 Identities = 146/173 (84%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||||| ||| | || || | ||||| ||| ||||||||||| || Sbjct: 960 gactccttctggatgttgtagtcagcaagggtcctgccatcctccagctgcttgccagca 901 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || |||||||||||||||||||| || ||||||| ||||| ||||||||| |||||||| Sbjct: 900 aagatgaggcgctgctggtccgggggaatgccctccttgtcctggatcttggccttgaca 841 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcag 295 ||||||||||| |||| |||| ||||| || |||||||||||||| ||||| Sbjct: 840 ttgtcgatggtatcagaagactccacctcgagggtgatggtcttgccggtcag 788
>dbj|AK108207.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-D06, full insert sequence Length = 686 Score = 190 bits (96), Expect = 2e-45 Identities = 193/228 (84%), Gaps = 1/228 (0%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 ||||||||||||| |||| ||||| ||||| |||| |||||||||||||| ||| | Sbjct: 279 ccaccacgcaggcggagcacgaggtggagggtcgactccttctggatgttgtagtccgaa 220 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || |||||||| | |||||||||||| |||||||| || |||||||||||||| || ||| Sbjct: 219 agggtgcggccgtcctcgagctgcttaccggcgaagataaggcgctgctggtcagggggg 160 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| ||||||||| ||||||||||||||||||||| | || |||| |||| Sbjct: 159 atgccctccttgtcctggatcttggccttgacgttgtcgatggtgtccgaagactccacc 100 Query: 270 ttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncat 317 | || ||||||||||| ||||| |||| ||||||| || |||| ||| Sbjct: 99 tcaagggtgatggtcttacccgtaaggg-tcttgacaaagatctgcat 53 Score = 63.9 bits (32), Expect = 3e-07 Identities = 39/42 (92%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 270 aggcggagcacgaggtggagggtcgactccttctggatgttg 229
>gb|U74318.1|SCU74318 Schizophyllum commune polyubiquitin mRNA, complete cds Length = 1079 Score = 188 bits (95), Expect = 9e-45 Identities = 181/212 (85%), Gaps = 1/212 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| || ||||||| |||||||||||||| ||| | || |||||||||| || Sbjct: 251 gcacgaggtggagagtagactccttctggatgttgtagtccgaaagggtgcggccatcct 192 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||||||||| || |||||||||||||| ||||| ||||||| ||||| || Sbjct: 191 cgagctgcttgccggcgaagatcaggcgctgctggtcgggaggaatgccctccttgtcct 132 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| |||||||||||| | ||||||| |||| || |||||||||| Sbjct: 131 ggatcttggccttgacattgtcgatggtgtccgaggactcaacctcgagagtgatggtct 72 Query: 286 tgcccgtcagggttcttgacnaanatctncat 317 |||| || |||| ||||||| || |||| ||| Sbjct: 71 tgccagtaaggg-tcttgacaaagatctgcat 41 Score = 178 bits (90), Expect = 8e-42 Identities = 216/260 (83%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||| ||||||| ||| | || ||||| || | ||| ||| Sbjct: 930 aggtggagggtcgactccttctgaatgttgtagtcagacagggtgcgaccgtcctccagc 871 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||||||||| |||||||||||||| ||||| || ||||||| ||||| ||| ||| Sbjct: 870 tgcttgccggcgaagatgaggcgctgctgatccgggggaatgccctccttgtcctgaatc 811 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 |||||||||||||||||||| ||| ||||||| | |||| || ||||| ||||||||| Sbjct: 810 ttcgccttgacgttgtcgatcgtgtcagaggattcgacctcgagcgtgatcgtcttgccc 751 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 |||| | ||||||| || |||| ||||||||||| ||| || || || |||||||| | Sbjct: 750 gtcaacg-tcttgacgaagatctgcataccaccac-gaagacgtaggacaaggtggagag 693 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 692 tcgactccttctggatgttg 673 Score = 147 bits (74), Expect = 3e-32 Identities = 169/203 (83%), Gaps = 1/203 (0%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||||| || | ||||||||||||| ||||||||||||||| ||| Sbjct: 690 gactccttctggatgttgtaatccgagagagtgcggccatcctcgagctgcttgccagcg 631 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || || || |||||||| || ||||||||||||| ||||| ||||||||| ||||| ||| Sbjct: 630 aagataagacgctgctgatcgggagggatgccctccttgtcctggatcttggccttcacg 571 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttctt 302 |||||||| ||| | || |||| |||| || || |||||||| || |||| || |||| Sbjct: 570 ttgtcgattgtgtccgacgactcgacctcgagggtaatggtcttcccggtcaagg-tctt 512 Query: 303 gacnaanatctncataccaccac 325 ||| || |||| ||||||||||| Sbjct: 511 gacgaagatctgcataccaccac 489 Score = 131 bits (66), Expect = 2e-27 Identities = 166/200 (83%), Gaps = 2/200 (1%) Strand = Plus / Minus Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||| ||||| || || || ||||||||||| || || ||||||| ||||| ||||||| Sbjct: 414 tgcttcccggcaaagataagacgctgctggtcgggcggaatgccctccttgtcctggatc 355 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 |||||||||||||||||||||||| | || |||| |||| || ||||| ||||||||| Sbjct: 354 ttcgccttgacgttgtcgatggtgtccgacgactcgacctcaagggtgatagtcttgccc 295 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || |||| ||||||| || |||| ||| || |||| || |||||||| |||||||| | Sbjct: 294 gtgaggg-tcttgacgaagatctgcatgccgccac-ggagacggagcacgaggtggagag 237 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 236 tagactccttctggatgttg 217
>gb|U29160.1|ZMU29160 Zea mays clone MubG10 ubiquitin fusion protein gene, complete cds Length = 1437 Score = 186 bits (94), Expect = 3e-44 Identities = 164/190 (86%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| |||||||||||||| ||| | || ||||| || | || Sbjct: 937 gcaccaggtggagggtggactccttctggatgttgtagtcggcgagggtgcgaccgtcct 878 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||||||||| ||||| |||||||||||||| |||||||||| ||||| || Sbjct: 877 cgagctgcttgccggcgaagatgagccgctgctggtccggggggatgccctccttgtcct 818 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| || |||||||||||| | ||||||| ||||| || |||||||||| Sbjct: 817 ggatcttggccttcacattgtcgatggtgtccgaggactccacctccaaagtgatggtct 758 Query: 286 tgcccgtcag 295 | |||||||| Sbjct: 757 tccccgtcag 748 Score = 60.0 bits (30), Expect = 5e-06 Identities = 34/36 (94%) Strand = Plus / Minus Query: 335 agcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||||||| |||||||| ||||||||| Sbjct: 938 agcaccaggtggagggtggactccttctggatgttg 903
>ref|NM_183832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 468 Score = 184 bits (93), Expect = 1e-43 Identities = 166/193 (86%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| |||||||||||||| ||| | || ||||| || | || Sbjct: 211 gcaccaggtggagggtcgactccttctggatgttgtagtcggcgagggtgcgcccgtcct 152 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| ||||| ||||||||||| || ||||| |||| ||||| || Sbjct: 151 ccagctgcttgccggcgaagatgagccgctgctggtcgggcgggatcccctccttgtcct 92 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||||||||| ||||||||||||||| | ||||||| ||||| ||| ||||| |||| Sbjct: 91 ggatcttcgccttcacgttgtcgatggtgtccgaggactccacctccagcgtgatcgtct 32 Query: 286 tgcccgtcagggt 298 | ||||||||||| Sbjct: 31 tccccgtcagggt 19 Score = 71.9 bits (36), Expect = 1e-09 Identities = 40/42 (95%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 218 aggcggagcaccaggtggagggtcgactccttctggatgttg 177
>emb|X56803.1|TAMRNAU T.aestivum L. mRNA for ubiquitin Length = 436 Score = 184 bits (93), Expect = 1e-43 Identities = 215/260 (82%) Strand = Plus / Minus Query: 39 agacctgtganccctgngacagaagcaacgtnatgaccaggcncttacttgccaccacgc 98 |||| ||||| ||| | |||||||||| | ||| ||||| |||||| ||||||||| Sbjct: 280 agacttgtgaacccagagacagaagcagctccatggccaggagcttactggccaccacgg 221 Query: 99 aggctangcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcgg 158 || | |||||| ||||||||| |||| |||||||||||||| ||| | | |||||| Sbjct: 220 agacggagcaccaagtgaagggtggactccttctggatgttgtagtccgccaaggtgcgg 161 Query: 159 ccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctnc 218 |||| ||| |||||||| ||||| || ||||| |||||||||||||| || ||||||| | Sbjct: 160 ccatcctcaagctgcttaccggcaaagatgagacgctgctggtccgggggaatgccctcc 101 Query: 219 ttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtg 278 |||| ||||||||||||||| |||||||| |||||| |||| |||| ||||| ||| ||| Sbjct: 100 ttgtcctggatcttcgccttcacgttgtcaatggtgtcagatgactccacctccagggtg 41 Query: 279 atggtcttgcccgtcagggt 298 ||||||||||| || ||||| Sbjct: 40 atggtcttgccggtgagggt 21
>emb|X56601.1|TAUBIQU Wheat mRNA for ubiquitin Length = 436 Score = 184 bits (93), Expect = 1e-43 Identities = 215/260 (82%) Strand = Plus / Minus Query: 39 agacctgtganccctgngacagaagcaacgtnatgaccaggcncttacttgccaccacgc 98 |||| ||||| ||| | |||||||||| | ||| ||||| |||||| ||||||||| Sbjct: 280 agacttgtgaacccagagacagaagcagctccatggccaggagcttactggccaccacgg 221 Query: 99 aggctangcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcgg 158 || | |||||| ||||||||| |||| |||||||||||||| ||| | | |||||| Sbjct: 220 agacggagcaccaagtgaagggtggactccttctggatgttgtagtccgccaaggtgcgg 161 Query: 159 ccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctnc 218 |||| ||| |||||||| ||||| || ||||| |||||||||||||| || ||||||| | Sbjct: 160 ccatcctcaagctgcttaccggcaaagatgagacgctgctggtccgggggaatgccctcc 101 Query: 219 ttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtg 278 |||| ||||||||||||||| |||||||| |||||| |||| |||| ||||| ||| ||| Sbjct: 100 ttgtcctggatcttcgccttcacgttgtcaatggtgtcagatgactccacctccagggtg 41 Query: 279 atggtcttgcccgtcagggt 298 ||||||||||| || ||||| Sbjct: 40 atggtcttgccggtgagggt 21
>gb|DQ086482.1| Triticum aestivum ubiquitin (Ubiq) mRNA, partial cds Length = 400 Score = 184 bits (93), Expect = 1e-43 Identities = 215/260 (82%) Strand = Plus / Minus Query: 39 agacctgtganccctgngacagaagcaacgtnatgaccaggcncttacttgccaccacgc 98 |||| ||||| ||| | |||||||||| | ||| ||||| |||||| ||||||||| Sbjct: 261 agacttgtgaacccagagacagaagcagctccatggccaggagcttactggccaccacgg 202 Query: 99 aggctangcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcgg 158 || | |||||| ||||||||| |||| |||||||||||||| ||| | | |||||| Sbjct: 201 agacggagcaccaagtgaagggtggactccttctggatgttgtagtccgccaaggtgcgg 142 Query: 159 ccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctnc 218 |||| ||| |||||||| ||||| || ||||| |||||||||||||| || ||||||| | Sbjct: 141 ccatcctcaagctgcttaccggcaaagatgagacgctgctggtccgggggaatgccctcc 82 Query: 219 ttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtg 278 |||| ||||||||||||||| |||||||| |||||| |||| |||| ||||| ||| ||| Sbjct: 81 ttgtcctggatcttcgccttcacgttgtcaatggtgtcagatgactccacctccagggtg 22 Query: 279 atggtcttgcccgtcagggt 298 ||||||||||| || ||||| Sbjct: 21 atggtcttgccggtgagggt 2
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 184 bits (93), Expect = 1e-43 Identities = 166/193 (86%) Strand = Plus / Plus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| |||||||||||||| ||| | || ||||| || | || Sbjct: 12628968 gcaccaggtggagggtcgactccttctggatgttgtagtcggcgagggtgcgcccgtcct 12629027 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| ||||| ||||||||||| || ||||| |||| ||||| || Sbjct: 12629028 ccagctgcttgccggcgaagatgagccgctgctggtcgggcgggatcccctccttgtcct 12629087 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||||||||| ||||||||||||||| | ||||||| ||||| ||| ||||| |||| Sbjct: 12629088 ggatcttcgccttcacgttgtcgatggtgtccgaggactccacctccagcgtgatcgtct 12629147 Query: 286 tgcccgtcagggt 298 | ||||||||||| Sbjct: 12629148 tccccgtcagggt 12629160 Score = 129 bits (65), Expect = 7e-27 Identities = 159/193 (82%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| || || |||| |||||||||||||| ||| | || ||||| || | || Sbjct: 25761088 gcaccaggtgcagcgtcgactccttctggatgttgtagtcggccagcgtgcgcccgtcct 25761029 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| ||||| |||||||||||||| ||||| |||| ||||| || Sbjct: 25761028 ccagctgcttgccggcgaagatgagccgctgctggtccggcgggatcccctccttgtcct 25760969 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 | | ||||||||||||||| | ||| ||| | | || ||||| ||| |||||||||| Sbjct: 25760968 gcaccttcgccttgacgttctggatcgtgtcgctgctctccacctccagcgtgatggtct 25760909 Query: 286 tgcccgtcagggt 298 | ||||||||||| Sbjct: 25760908 tccccgtcagggt 25760896 Score = 107 bits (54), Expect = 3e-20 Identities = 120/144 (83%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| || || |||| |||||||||||||| ||| | || |||||||| | || Sbjct: 25765510 gcacgaggtgcagcgtcgactccttctggatgttgtagtcggccagcgtgcggccgtcct 25765451 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| ||||| |||||||||| ||| |||| ||||| | ||| | Sbjct: 25765450 ccagctgcttgccggcgaagatgagccgctgctggtgcggcgggacgccctccctgtcgt 25765391 Query: 226 ggatcttcgccttgacgttgtcga 249 ||||| ||||||||||||| |||| Sbjct: 25765390 ggatcctcgccttgacgttctcga 25765367 Score = 71.9 bits (36), Expect = 1e-09 Identities = 40/42 (95%) Strand = Plus / Plus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 12628961 aggcggagcaccaggtggagggtcgactccttctggatgttg 12629002 Score = 56.0 bits (28), Expect = 8e-05 Identities = 38/42 (90%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||||||| || || |||||||| ||||||||| Sbjct: 25761095 aggcggagcaccaggtgcagcgtcgactccttctggatgttg 25761054 Score = 48.1 bits (24), Expect = 0.020 Identities = 37/42 (88%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||| ||||| || || |||||||| ||||||||| Sbjct: 25765517 aggcggagcacgaggtgcagcgtcgactccttctggatgttg 25765476
>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0537A05 Length = 152396 Score = 184 bits (93), Expect = 1e-43 Identities = 166/193 (86%) Strand = Plus / Plus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| |||||||||||||| ||| | || ||||| || | || Sbjct: 140578 gcaccaggtggagggtcgactccttctggatgttgtagtcggcgagggtgcgcccgtcct 140637 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| ||||| ||||||||||| || ||||| |||| ||||| || Sbjct: 140638 ccagctgcttgccggcgaagatgagccgctgctggtcgggcgggatcccctccttgtcct 140697 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||||||||| ||||||||||||||| | ||||||| ||||| ||| ||||| |||| Sbjct: 140698 ggatcttcgccttcacgttgtcgatggtgtccgaggactccacctccagcgtgatcgtct 140757 Query: 286 tgcccgtcagggt 298 | ||||||||||| Sbjct: 140758 tccccgtcagggt 140770 Score = 71.9 bits (36), Expect = 1e-09 Identities = 40/42 (95%) Strand = Plus / Plus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 140571 aggcggagcaccaggtggagggtcgactccttctggatgttg 140612
>dbj|AK061988.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B08, full insert sequence Length = 794 Score = 184 bits (93), Expect = 1e-43 Identities = 166/193 (86%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| |||||||||||||| ||| | || ||||| || | || Sbjct: 313 gcaccaggtggagggtcgactccttctggatgttgtagtcggcgagggtgcgcccgtcct 254 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| ||||| ||||||||||| || ||||| |||| ||||| || Sbjct: 253 ccagctgcttgccggcgaagatgagccgctgctggtcgggcgggatcccctccttgtcct 194 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||||||||| ||||||||||||||| | ||||||| ||||| ||| ||||| |||| Sbjct: 193 ggatcttcgccttcacgttgtcgatggtgtccgaggactccacctccagcgtgatcgtct 134 Query: 286 tgcccgtcagggt 298 | ||||||||||| Sbjct: 133 tccccgtcagggt 121 Score = 71.9 bits (36), Expect = 1e-09 Identities = 40/42 (95%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 320 aggcggagcaccaggtggagggtcgactccttctggatgttg 279
>dbj|AK059242.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-F10, full insert sequence Length = 1517 Score = 184 bits (93), Expect = 1e-43 Identities = 166/193 (86%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| |||||||||||||| ||| | || ||||| || | || Sbjct: 313 gcaccaggtggagggtcgactccttctggatgttgtagtcggcgagggtgcgcccgtcct 254 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| ||||| ||||||||||| || ||||| |||| ||||| || Sbjct: 253 ccagctgcttgccggcgaagatgagccgctgctggtcgggcgggatcccctccttgtcct 194 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||||||||| ||||||||||||||| | ||||||| ||||| ||| ||||| |||| Sbjct: 193 ggatcttcgccttcacgttgtcgatggtgtccgaggactccacctccagcgtgatcgtct 134 Query: 286 tgcccgtcagggt 298 | ||||||||||| Sbjct: 133 tccccgtcagggt 121 Score = 71.9 bits (36), Expect = 1e-09 Identities = 40/42 (95%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 320 aggcggagcaccaggtggagggtcgactccttctggatgttg 279
>gb|BT016665.1| Zea mays clone Contig498 mRNA sequence Length = 1012 Score = 182 bits (92), Expect = 5e-43 Identities = 204/243 (83%), Gaps = 2/243 (0%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||||| || |||||||||| ||| ||||||||||||||||| || Sbjct: 723 cttctggatgttgtagtctgctagggtgcggccatcctccagctgcttgccggcgaagat 664 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 || ||||||||||| || |||||||||| |||| ||||||||||||||| |||||||| Sbjct: 663 cagacgctgctggtctggggggatgccctctttgtcctggatcttcgccttcacgttgtc 604 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacna 307 ||||||| | ||| || |||| ||| || ||||||||||| |||| || |||| || | Sbjct: 603 gatggtgtcggagctctcaacctccagggttatggtcttgccagtcaagg-tcttcacaa 545 Query: 308 anatctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatg 367 | |||| ||||||||| | || ||||||||||||||||||||| |||||| |||||| Sbjct: 544 agatctgcataccacctcgcaa-gcggagcaccaggtggagggtgctctccttctggatg 486 Query: 368 ttg 370 ||| Sbjct: 485 ttg 483 Score = 172 bits (87), Expect = 5e-40 Identities = 219/265 (82%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| || |||||||||||||| ||| | || || ||||||| || Sbjct: 517 gcaccaggtggagggtgctctccttctggatgttgtagtcggcgagggtacggccatcct 458 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| || || || |||||||||||||||||||||||||||| ||||| || Sbjct: 457 ccagctgcttgccagcaaagatcaggcgctgctggtccggagggatgccctccttgtcct 398 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||||||||||||||||||| |||| |||| ||||| || ||||| |||| Sbjct: 397 ggatcttggccttgacgttgtcgatggtgtcagaagactccacctcgagggtgatagtct 338 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 | || || |||| ||||||| || |||| ||| || || | |||||||| || ||||| Sbjct: 337 ttccagtgaggg-tcttgacgaagatctgcatgcctcc-cctgaggcggagaacaaggtg 280 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||| ||||||||| Sbjct: 279 gagggtgctctccttctggatgttg 255 Score = 139 bits (70), Expect = 7e-30 Identities = 123/143 (86%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | || ||||| || | ||||||||||||||| ||||| || Sbjct: 267 cttctggatgttgtagtcggcaagtgtgcgcccgtcctcgagctgcttgccagcgaagat 208 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| |||||||||||||| || ||||| | ||||| ||||||||| |||||||||||||| Sbjct: 207 gagccgctgctggtccgggggaatgccttccttgtcctggatcttggccttgacgttgtc 148 Query: 248 gatggtgncagaggactncacct 270 |||||| ||||||||| ||||| Sbjct: 147 aatggtgtcagaggactccacct 125 Score = 48.1 bits (24), Expect = 0.020 Identities = 37/42 (88%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 |||||||||||||||||||| || |||||| ||||||||| Sbjct: 752 aggcggagcaccaggtggagagtgctctccttctggatgttg 711
>gb|BT016436.1| Zea mays clone Contig269 mRNA sequence Length = 990 Score = 182 bits (92), Expect = 5e-43 Identities = 204/243 (83%), Gaps = 2/243 (0%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||||| || |||||||||| ||| ||||||||||||||||| || Sbjct: 682 cttctggatgttgtagtctgctagggtgcggccatcctccagctgcttgccggcgaagat 623 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 || ||||||||||| || |||||||||| |||| ||||||||||||||| |||||||| Sbjct: 622 cagacgctgctggtctggggggatgccctctttgtcctggatcttcgccttcacgttgtc 563 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacna 307 ||||||| | ||| || |||| ||| || ||||||||||| |||| || |||| || | Sbjct: 562 gatggtgtcggagctctcaacctccagggttatggtcttgccagtcaagg-tcttcacaa 504 Query: 308 anatctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatg 367 | |||| ||||||||| | || ||||||||||||||||||||| |||||| |||||| Sbjct: 503 agatctgcataccacctcgcaa-gcggagcaccaggtggagggtgctctccttctggatg 445 Query: 368 ttg 370 ||| Sbjct: 444 ttg 442 Score = 145 bits (73), Expect = 1e-31 Identities = 138/162 (85%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | | ||||| |||| ||| ||||||||||||||||| || Sbjct: 226 cttctggatgttgtagtcagccaaggtgcgaccatcctccagctgcttgccggcgaagat 167 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| |||||||||||||| |||||||||| ||||| ||||||||| || ||||||||||| Sbjct: 166 gagccgctgctggtccggtgggatgccctccttgtcctggatcttggcattgacgttgtc 107 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcc 289 |||||| | ||||||| ||||| || ||||| |||||||| Sbjct: 106 aatggtgtctgaggactccacctcaagggtgatcgtcttgcc 65 Score = 141 bits (71), Expect = 2e-30 Identities = 215/265 (81%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| || |||||||||||||| ||| | || || ||||||| || Sbjct: 476 gcaccaggtggagggtgctctccttctggatgttgtagtcggcgagggtacggccatcct 417 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| || || || ||||||||||||||||| || ||||||| ||||| || Sbjct: 416 ccagctgcttgccagcaaagatcaggcgctgctggtccggtggaatgccctccttgtcct 357 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| || ||||| || ||||| ||| |||| |||| ||||| || |||||||||| Sbjct: 356 ggatcttggctttgacattatcgattgtgtcagacgactccacctccaaggtgatggtct 297 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| |||| | |||| || || |||| ||| ||||| | ||||||||||||| ||| Sbjct: 296 tgccagtcaatg-tcttcacaaagatctgcatgccacc-cctgaggcggagcaccaagtg 239 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||| ||||||||| Sbjct: 238 gagggtgctctccttctggatgttg 214 Score = 48.1 bits (24), Expect = 0.020 Identities = 37/42 (88%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 |||||||||||||||||||| || |||||| ||||||||| Sbjct: 711 aggcggagcaccaggtggagagtgctctccttctggatgttg 670
>gb|BT016403.1| Zea mays clone Contig236 mRNA sequence Length = 1019 Score = 182 bits (92), Expect = 5e-43 Identities = 204/243 (83%), Gaps = 2/243 (0%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||||| || |||||||||| ||| ||||||||||||||||| || Sbjct: 350 cttctggatgttgtagtctgctagggtgcggccatcctccagctgcttgccggcgaagat 291 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 || ||||||||||| || |||||||||| |||| ||||||||||||||| |||||||| Sbjct: 290 cagacgctgctggtctggggggatgccctctttgtcctggatcttcgccttcacgttgtc 231 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacna 307 ||||||| | ||| || |||| ||| || ||||||||||| |||| || |||| || | Sbjct: 230 gatggtgtcggagctctcaacctccagggttatggtcttgccagtcaagg-tcttcacaa 172 Query: 308 anatctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatg 367 | |||| ||||||||| | || ||||||||||||||||||||| |||||| |||||| Sbjct: 171 agatctgcataccacctcgcaa-gcggagcaccaggtggagggtgctctccttctggatg 113 Query: 368 ttg 370 ||| Sbjct: 112 ttg 110 Score = 137 bits (69), Expect = 3e-29 Identities = 137/162 (84%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | | ||||| |||| ||| ||||||||||||||||| || Sbjct: 806 cttctggatgttgtagtcagccaaggtgcgaccatcctccagctgcttgccggcgaagat 747 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 || |||||||||||||| || ||||||| ||||| ||||||||| |||||||||||||| Sbjct: 746 cagccgctgctggtccggtggaatgccctccttgtcctggatcttggccttgacgttgtc 687 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcc 289 |||||| | ||||||| ||||| || ||||| |||||||| Sbjct: 686 aatggtgtctgaggactccacctcaagggtgatcgtcttgcc 645 Score = 137 bits (69), Expect = 3e-29 Identities = 137/162 (84%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| |||| || || ||||||| ||| ||||||||||| || || || Sbjct: 578 cttctggatgttgtaatctgcaagggtacggccatcctccagctgcttgccagcaaagat 519 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| |||||||||||||| || ||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 518 gagccgctgctggtccggtggaatgccctccttgtcctggatcttggccttgacattgtc 459 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcc 289 ||||||| | ||||||| ||||| || ||||| |||||||| Sbjct: 458 gatggtgtccgaggactccacctcaagggtgatcgtcttgcc 417 Score = 99.6 bits (50), Expect = 6e-18 Identities = 113/136 (83%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| || |||||||||||||| ||| | || || ||||||| || Sbjct: 144 gcaccaggtggagggtgctctccttctggatgttgtagtcggcgagggtacggccatcct 85 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| || || || ||||||||||||||||| || ||||||| ||||| || Sbjct: 84 ccagctgcttgccagcaaagatcaggcgctgctggtccggtggaatgccctccttgtcct 25 Query: 226 ggatcttcgccttgac 241 ||||||| || ||||| Sbjct: 24 ggatcttggctttgac 9 Score = 48.1 bits (24), Expect = 0.020 Identities = 37/42 (88%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||| ||||||||| |||||| ||||||||| Sbjct: 835 aggcggagcaccaagtggagggtgctctccttctggatgttg 794
>gb|S94466.1| polyubiquitin [maize, Genomic, 3439 nt] Length = 3439 Score = 182 bits (92), Expect = 5e-43 Identities = 204/243 (83%), Gaps = 2/243 (0%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||||| || |||||||||| ||| ||||||||||||||||| || Sbjct: 3206 cttctggatgttgtagtctgctagggtgcggccatcctccagctgcttgccggcgaagat 3147 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 || ||||||||||| || |||||||||| |||| ||||||||||||||| |||||||| Sbjct: 3146 cagacgctgctggtctggggggatgccctctttgtcctggatcttcgccttcacgttgtc 3087 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacna 307 ||||||| | ||| || |||| ||| || ||||||||||| |||| || |||| || | Sbjct: 3086 gatggtgtcggagctctcaacctccagggttatggtcttgccagtcaagg-tcttcacaa 3028 Query: 308 anatctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatg 367 | |||| ||||||||| | || ||||||||||||||||||||| |||||| |||||| Sbjct: 3027 agatctgcataccacctcgcaa-gcggagcaccaggtggagggtgctctccttctggatg 2969 Query: 368 ttg 370 ||| Sbjct: 2968 ttg 2966 Score = 167 bits (84), Expect = 3e-38 Identities = 202/243 (83%), Gaps = 2/243 (0%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||| ||||||| ||| | || ||||| || | ||||||||||||||| || ||||| Sbjct: 2066 cttctgaatgttgtagtcggccagcgtgcgcccgtcctcgagctgcttgccagcaaaaat 2007 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| ||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||| Sbjct: 2006 gagccgctgctggtccggagggatgccctccttgtcctggatcttggccttgacgttgtc 1947 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacna 307 ||||||| |||| |||| ||||| || ||||| ||||| || || |||| ||||||| | Sbjct: 1946 gatggtgtcagaagactccacctcgagggtgatagtctttccagtgaggg-tcttgacga 1888 Query: 308 anatctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatg 367 | |||| ||| || || | |||||||| || ||||||||||| |||||| |||||| Sbjct: 1887 agatctgcatgcctcc-cctgaggcggagaacaaggtggagggtgctctccttctggatg 1829 Query: 368 ttg 370 ||| Sbjct: 1828 ttg 1826 Score = 141 bits (71), Expect = 2e-30 Identities = 215/265 (81%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| || |||||||||||||| ||| | || || ||||||| || Sbjct: 3000 gcaccaggtggagggtgctctccttctggatgttgtagtcggcgagggtacggccatcct 2941 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| || || || ||||||||||||||||| || ||||||| ||||| || Sbjct: 2940 ccagctgcttgccagcaaagatcaggcgctgctggtccggtggaatgccctccttgtcct 2881 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| || ||||| || ||||| ||| |||| |||| ||||| || |||||||||| Sbjct: 2880 ggatcttggctttgacattatcgattgtgtcagacgactccacctccaaggtgatggtct 2821 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| |||| | |||| || || |||| ||| ||||| | ||||||||||||| ||| Sbjct: 2820 tgccagtcaatg-tcttcacaaagatctgcatgccacc-cctgaggcggagcaccaagtg 2763 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||| ||||||||| Sbjct: 2762 gagggtgctctccttctggatgttg 2738 Score = 141 bits (71), Expect = 2e-30 Identities = 142/168 (84%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||| ||||||| ||| | || ||||| || | |||||||||||||||||| ||||| Sbjct: 2294 cttctgaatgttgtagtcggcaagcgtgcgcccgtcctcgagctgcttgccggcaaaaat 2235 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| ||||||||||||||||||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 2234 gagccgctgctggtccggagggatgccctccttgtcctggatcttggccttgacattgtc 2175 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcag 295 ||||| |||| |||| |||| || ||||| |||||||| ||||| Sbjct: 2174 aatggtatcagaagactcgacctcaagggtgatagtcttgccagtcag 2127 Score = 139 bits (70), Expect = 7e-30 Identities = 123/143 (86%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | || ||||| || | ||||||||||||||| ||||| || Sbjct: 1838 cttctggatgttgtagtcggcaagtgtgcgcccgtcctcgagctgcttgccagcgaagat 1779 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| |||||||||||||| || ||||| | ||||| ||||||||| |||||||||||||| Sbjct: 1778 gagccgctgctggtccgggggaatgccttccttgtcctggatcttggccttgacgttgtc 1719 Query: 248 gatggtgncagaggactncacct 270 |||||| ||||||||| ||||| Sbjct: 1718 aatggtgtcagaggactccacct 1696 Score = 137 bits (69), Expect = 3e-29 Identities = 137/162 (84%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | | ||||| |||| ||| ||||||||||||||||| || Sbjct: 2750 cttctggatgttgtagtcagccaaggtgcgaccatcctccagctgcttgccggcgaagat 2691 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 || |||||||||||||| || ||||||| ||||| ||||||||| |||||||||||||| Sbjct: 2690 cagccgctgctggtccggtggaatgccctccttgtcctggatcttggccttgacgttgtc 2631 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcc 289 |||||| | ||||||| ||||| || ||||| |||||||| Sbjct: 2630 aatggtgtctgaggactccacctcaagggtgatcgtcttgcc 2589 Score = 137 bits (69), Expect = 3e-29 Identities = 137/162 (84%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| |||| || || ||||||| ||| ||||||||||| || || || Sbjct: 2522 cttctggatgttgtaatctgcaagggtacggccatcctccagctgcttgccagcaaagat 2463 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| |||||||||||||| || ||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 2462 gagccgctgctggtccggtggaatgccctccttgtcctggatcttggccttgacattgtc 2403 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcc 289 ||||||| | ||||||| ||||| || ||||| |||||||| Sbjct: 2402 gatggtgtccgaggactccacctcaagggtgatcgtcttgcc 2361 Score = 48.1 bits (24), Expect = 0.020 Identities = 37/42 (88%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 |||||||||||||||||||| || |||||| ||||||||| Sbjct: 3235 aggcggagcaccaggtggagagtgctctccttctggatgttg 3194
>gb|AY099133.1| Cercomonas edax isolate pub5 polyubiquitin gene, partial cds Length = 532 Score = 180 bits (91), Expect = 2e-42 Identities = 180/212 (84%), Gaps = 1/212 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||||||||| |||| |||||||||||||| ||| | || |||||||| | || Sbjct: 425 gcacaaggtgaagggttgactccttctggatgttgtagtcagccagggtgcggccgtcct 366 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||||||||| |||||||||||||| ||||| |||||||||| ||||| || Sbjct: 365 cgagctgcttgccggcgaagatgaggcgctgctgatccggggggatgccctccttgtcct 306 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 |||||||| ||| ||||| ||||||||| ||||| || ||| | ||| |||||||||| Sbjct: 305 ggatcttctgcttcacgttctcgatggtgtcagagctctccacgtccagggtgatggtct 246 Query: 286 tgcccgtcagggttcttgacnaanatctncat 317 |||| || |||| ||||||| || |||| ||| Sbjct: 245 tgccggtgaggg-tcttgacgaagatctgcat 215 Score = 178 bits (90), Expect = 8e-42 Identities = 171/201 (85%) Strand = Plus / Minus Query: 89 gccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctgg 148 ||||||||| |||| |||| ||||||||||| |||| |||||||||||||| ||| | Sbjct: 208 gccaccacggaggcgcagcacaaggtgaagggtcgactccttctggatgttgtagtcagc 149 Query: 149 nagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggagg 208 || |||||||| | ||||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 148 cagggtgcggccgtcctcgagctgcttgccggcgaagatgaggcgctgctgatccggggg 89 Query: 209 gatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncac 268 |||||||| ||||| |||||||||| ||| ||||| ||||||||| ||||| || ||| Sbjct: 88 gatgccctccttgtcctggatcttctgcttcacgttctcgatggtgtcagagctctccac 29 Query: 269 cttcagtgtgatggtcttgcc 289 | ||| |||||||||||||| Sbjct: 28 gtccagggtgatggtcttgcc 8
>gb|AY098526.1| Ananas comosus tetrameric ubiquitin mRNA, complete cds Length = 1199 Score = 180 bits (91), Expect = 2e-42 Identities = 237/288 (82%), Gaps = 2/288 (0%) Strand = Plus / Minus Query: 83 ttacttgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtn 142 ||||| |||||| ||||||| | | || ||||| ||||| || | |||||||||||||| Sbjct: 956 ttactggccaccgcgcaggcgaaggacgaggtggagggttgattccttctggatgttgta 897 Query: 143 gtctggnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtc 202 ||| | ||||||||||| | ||| | |||||| ||||| || ||||| ||||||||||| Sbjct: 896 gtccgccagagtgcggccgtcctccaactgcttaccggcaaagatgagccgctgctggtc 837 Query: 203 cggagggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagagga 262 ||| |||||||||| ||||| ||||||||| || |||||||||||||| ||| | ||||| Sbjct: 836 cggcgggatgccctccttgtcctggatcttagctttgacgttgtcgatcgtgtcggagga 777 Query: 263 ctncaccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccac 322 || |||| || |||||||||||||| ||||||| |||| || || |||| ||| || | Sbjct: 776 ctcgacctcgagggtgatggtcttgccggtcaggg-tcttcacgaagatctgcatgccgc 718 Query: 323 cacanaaggcggagcaccaggtggagggtngactccttntggatgttg 370 ||| || |||||||| |||||||| || |||||||| ||||||||| Sbjct: 717 cac-ggagacggagcacgaggtggagcgtcgactccttctggatgttg 671 Score = 165 bits (83), Expect = 1e-37 Identities = 218/265 (82%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| || || |||| |||||||||||||| ||| | ||||||||||| | || Sbjct: 705 gcacgaggtggagcgtcgactccttctggatgttgtagtccgccagagtgcggccgtcct 646 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | | ||||||||| ||||| || || |||||||||||||| ||||| |||| ||||| || Sbjct: 645 ccaactgcttgcctgcgaagatcagacgctgctggtccggcgggataccctccttgtcct 586 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 |||| || ||||| || |||||||||||| | ||||||| |||| || |||||||||| Sbjct: 585 ggattttggccttaacattgtcgatggtgtcggaggactcgacctcgagggtgatggtct 526 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| ||||||| ||||||| || |||| ||| || |||| || |||||||| ||||| Sbjct: 525 tgccggtcaggg-tcttgacgaagatctgcatgccgccac-ggagacggagcacgaggtg 468 Query: 346 gagggtngactccttntggatgttg 370 ||| || |||||||| ||||||||| Sbjct: 467 gagcgtcgactccttctggatgttg 443 Score = 165 bits (83), Expect = 1e-37 Identities = 218/265 (82%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| || || |||| |||||||||||||| ||| | ||||||||||| | || Sbjct: 477 gcacgaggtggagcgtcgactccttctggatgttgtagtccgcaagagtgcggccgtcct 418 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | | ||||||||| ||||| || || |||||||||||||| ||||| |||| ||||| || Sbjct: 417 ccaactgcttgcctgcgaagatcagacgctgctggtccggggggatcccctccttgtcct 358 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 |||| || |||||||| |||||||||||| | ||||||| |||| || |||||||||| Sbjct: 357 ggattttggccttgacattgtcgatggtgtcggaggactcgacctcgagggtgatggtct 298 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| ||||||| ||||||| || |||| ||| || |||| || ||||| || ||||| Sbjct: 297 tgccggtcaggg-tcttgacgaagatctgcatgccgccac-ggagacggaggacgaggtg 240 Query: 346 gagggtngactccttntggatgttg 370 ||| || |||||||| ||||||||| Sbjct: 239 gagcgtcgactccttctggatgttg 215 Score = 135 bits (68), Expect = 1e-28 Identities = 147/176 (83%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||||| ||| | ||||||||||| | ||| | ||||||||||||| Sbjct: 232 gactccttctggatgttgtagtccgcgagagtgcggccgtcctccaactgcttgccggcg 173 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || || | |||||||||||||| ||||| |||| ||||| |||||| || |||||||| Sbjct: 172 aagatcaaccgctgctggtccggggggatcccctccttgtcctggattttggccttgaca 113 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggt 298 |||||||||||| | || |||| |||| || |||||||||||||| |||||||| Sbjct: 112 ttgtcgatggtgtcggacgactcgacctcgagggtgatggtcttgccggtcagggt 57
>gb|L41658.1|SCFPOLY Saccharum hybrid (clone SCUBI561) polyubiquitin mRNA, complete cds Length = 1187 Score = 180 bits (91), Expect = 2e-42 Identities = 220/265 (83%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| || |||||||||||||| || | |||||||| || | || Sbjct: 737 gcaccaggtggagggtgctctccttctggatgttgtaatcagcaagagtgcgcccgtcct 678 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| ||||| ||||| ||||||||||||||||||||||||| ||||| || Sbjct: 677 ccagctgcttgccagcgaagatgagccgctgctggtccggagggatgccctccttgtcct 618 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||||||||||||||||||| ||||||||| ||||| || ||||| |||| Sbjct: 617 ggatcttggccttgacgttgtcgatggtgtcagaggactccacctcaagggtgatcgtct 558 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| || |||| |||| || || |||| ||| || || | ||||| ||||||| ||| Sbjct: 557 tgccagtaaggg-tcttcacgaagatctgcatgcctcc-cctgaggcgcagcaccaagtg 500 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||| ||||||||| Sbjct: 499 gagggtgctctccttctggatgttg 475 Score = 178 bits (90), Expect = 8e-42 Identities = 149/171 (87%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| || | |||||||| || | ||| ||||||||||||||||| || Sbjct: 487 cttctggatgttgtaatcagcaagagtgcgcccgtcctccagctgcttgccggcgaagat 428 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| ||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||| Sbjct: 427 gagccgctgctggtccggagggatgccctccttgtcctggatcttggccttgacgttgtc 368 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggt 298 ||||||| ||||||||| ||||| || ||||| |||||||| || ||||| Sbjct: 367 gatggtgtcagaggactccacctcaagggtgatcgtcttgccagtaagggt 317 Score = 165 bits (83), Expect = 1e-37 Identities = 218/265 (82%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| || |||||||||||||| ||||| || |||||||||| || Sbjct: 965 gcaccaggtggagggtgctctccttctggatgttgtagtctgcaagggtgcggccatcct 906 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| || || ||||| |||||||| ||||| |||| ||||| || Sbjct: 905 ccagctgcttgccggcgaagatcagacgctgttggtccggggggatcccctccttgtcct 846 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| ||||||||||||||| | ||| || |||| |||||| ||||||| Sbjct: 845 ggatcttggccttcacgttgtcgatggtgtcggagctctcaacctccagtgttatggtct 786 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| |||| || |||| || || |||| ||| || || | ||||| ||||||||||| Sbjct: 785 tgccagtcaagg-tcttcacaaagatctgcattcctcc-cctgaggcgcagcaccaggtg 728 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||| ||||||||| Sbjct: 727 gagggtgctctccttctggatgttg 703 Score = 147 bits (74), Expect = 3e-32 Identities = 145/171 (84%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| || | |||||||| || | ||| ||||||||||||||||| || Sbjct: 259 cttctggatgttgtaatcagcaagagtgcgcccgtcctccagctgcttgccggcgaagat 200 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| |||||||||||||| || ||||||| ||||| ||||||||| |||||||||||||| Sbjct: 199 gagccgctgctggtccgggggaatgccctccttgtcctggatcttagccttgacgttgtc 140 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggt 298 |||||| |||| |||| ||||| || ||||| |||||||| || ||||| Sbjct: 139 aatggtgtcagaagactccacctcgagggtgatagtcttgccggtgagggt 89 Score = 50.1 bits (25), Expect = 0.005 Identities = 35/39 (89%) Strand = Plus / Minus Query: 332 cggagcaccaggtggagggtngactccttntggatgttg 370 |||||||||||||||||||| |||||| ||||||||| Sbjct: 969 cggagcaccaggtggagggtgctctccttctggatgttg 931
>emb|Z24723.1|PCUBIQGNA P.chrysosporium ubiquitin gene, complete CDS Length = 2054 Score = 178 bits (90), Expect = 8e-42 Identities = 157/182 (86%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||||| || | || |||||||||| ||| ||| Sbjct: 578 aggtggagggtggactccttctggatgttgtaatcggagagggtgcggccatcctcaagc 519 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||||||||| || ||||| ||||||||||| || |||||||||| ||||| ||||||| Sbjct: 518 tgcttgccggcaaagatgagacgctgctggtctggtgggatgccctccttgtcctggatc 459 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||||||||||||||||||| ||||||||| |||| || ||||||||||||||| Sbjct: 458 ttggccttgacgttgtcgatggtgtcagaggactcgacctcgagggtgatggtcttgccc 399 Query: 291 gt 292 || Sbjct: 398 gt 397 Score = 155 bits (78), Expect = 1e-34 Identities = 179/215 (83%), Gaps = 1/215 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| |||||||||| |||||||| |||| || | || |||||||||| |||||| Sbjct: 1136 aggtggagggtagactctttctggatattgtaatccgaaagcgtgcggccatcttcgagc 1077 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||||||||| || ||||||||||| |||||||||||||||| ||||| ||| ||| Sbjct: 1076 tgcttgccggcgaagatcaggcgctgctgatccggagggatgccctccttgtcctgaatc 1017 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||||||||||||||| ||| | || |||| |||| || ||||| ||||| ||| Sbjct: 1016 ttggccttgacgttgtcgatcgtgtccgacgactcgacctcaagagtgatcgtcttaccc 957 Query: 291 gtcagggttcttgacnaanatctncataccaccac 325 || |||| ||||||| || |||| |||||| |||| Sbjct: 956 gtgaggg-tcttgacgaagatctgcataccgccac 923 Score = 147 bits (74), Expect = 3e-32 Identities = 209/256 (81%), Gaps = 2/256 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 |||||||||||||||| |||||||||||| | ||| | |||||||| || | ||| ||| Sbjct: 1364 aggtgaagggtagactccttctggatgttatagtccgaaagagtgcgaccgtcctccagc 1305 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||| || ||||| ||||||||||||||||| || || || |||| ||||| |||||| Sbjct: 1304 tgcttaccagcgaagatgaggcgctgctggtctgggggaataccctccttgtcttggatc 1245 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 ||||||||||||||||| |||||| | || |||| |||| || ||||| |||||||| Sbjct: 1244 ttcgccttgacgttgtcaatggtgtccgaagactcgacctcgagcgtgatcgtcttgccg 1185 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 |||| | |||| || || |||| ||||||||||| ||| || || || |||||||||| Sbjct: 1184 gtcaacg-tcttcacgaagatctgcataccaccac-gaagacgaaggacaaggtggaggg 1127 Query: 351 tngactccttntggat 366 | ||||| || ||||| Sbjct: 1126 tagactctttctggat 1111 Score = 121 bits (61), Expect = 2e-24 Identities = 162/198 (81%), Gaps = 1/198 (0%) Strand = Plus / Minus Query: 120 gtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccg 179 ||||||| |||||||||||||| || | | || ||||| | ||||||||||||||| Sbjct: 849 gtagactccttctggatgttgtaatcggacaacgtacggccgtcctcgagctgcttgcca 790 Query: 180 gcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttg 239 || || ||||| ||||||||||||||||| ||||| | ||||| ||||||||| ||||| Sbjct: 789 gcaaagatgagacgctgctggtccggaggaatgccttccttgtcctggatcttggccttc 730 Query: 240 acgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggtt 299 || || || |||||| | || |||| |||| || |||||||||||||||||||||| | Sbjct: 729 acattatcaatggtgtcggaagactcgacctcgagcgtgatggtcttgcccgtcaggg-t 671 Query: 300 cttgacnaanatctncat 317 |||||| || |||| ||| Sbjct: 670 cttgacaaagatctgcat 653 Score = 95.6 bits (48), Expect = 1e-16 Identities = 103/123 (83%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | || || || || | |||||| |||||||||||||| || Sbjct: 1627 cttctggatgttgtagtcggagagggtacgcccgtcctcgagttgcttgccggcgaagat 1568 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 || ||||||||||| || |||||||| | ||||| |||||||| |||||||||||||| Sbjct: 1567 cagacgctgctggtcgggcgggatgccttccttgtcttggatctttgccttgacgttgtc 1508 Query: 248 gat 250 ||| Sbjct: 1507 gat 1505 Score = 48.1 bits (24), Expect = 0.020 Identities = 28/30 (93%) Strand = Plus / Minus Query: 341 aggtggagggtngactccttntggatgttg 370 ||||||||||| |||||||| ||||||||| Sbjct: 578 aggtggagggtggactccttctggatgttg 549
>gb|AY099129.1| Cercomonas edax isolate pub1 polyubiquitin gene, partial cds Length = 298 Score = 178 bits (90), Expect = 8e-42 Identities = 171/201 (85%) Strand = Plus / Minus Query: 89 gccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctgg 148 |||||||||||| | |||| ||||||||||| |||| |||||||||||||| ||| | Sbjct: 208 gccaccacgcagacgcagcacaaggtgaagggttgactccttctggatgttgtagtcagc 149 Query: 149 nagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggagg 208 || |||||||| | |||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 148 cagggtgcggccgtcctcgagctgcttgccggcgaaaatgaggcgctgctgatccggggg 89 Query: 209 gatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncac 268 |||||||| ||||| |||||||||| ||| ||||| ||||| ||| ||||| || ||| Sbjct: 88 gatgccctccttgtcctggatcttctgcttcacgttctcgatcgtgtcagagctctccac 29 Query: 269 cttcagtgtgatggtcttgcc 289 | ||| |||||||||||||| Sbjct: 28 gtccagggtgatggtcttgcc 8
>gb|BT017442.1| Zea mays clone EL01N0405B08.c mRNA sequence Length = 805 Score = 176 bits (89), Expect = 3e-41 Identities = 165/193 (85%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| |||||||||||||| ||| | || |||||||| | || Sbjct: 301 gcaccaggtggagggtggactccttctggatgttgtagtcggcgagggtgcggccgtcct 242 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||||||||| || || |||||||||||||| |||||||||| ||||| || Sbjct: 241 cgagctgcttgccggcgaagattagccgctgctggtccggcgggatgccctccttgtcct 182 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 | ||||| ||||| ||||||||||||||| | ||||||| ||||| || ||||| || | Sbjct: 181 gtatcttggccttcacgttgtcgatggtgtccgaggactccacctccaacgtgatcgttt 122 Query: 286 tgcccgtcagggt 298 | ||||||||||| Sbjct: 121 tccccgtcagggt 109 Score = 71.9 bits (36), Expect = 1e-09 Identities = 40/42 (95%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 308 aggcggagcaccaggtggagggtggactccttctggatgttg 267
>ref|XM_388944.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08768.1) partial mRNA Length = 690 Score = 176 bits (89), Expect = 3e-41 Identities = 218/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||||||||| || | |||||||||||||| ||| | || || || || | |||| Sbjct: 665 accaggtgaagggttgattccttctggatgttgtagtcggagagggttcgaccgtcctcg 606 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||||||||| | |||||||| || |||||||| |||| ||||| |||| Sbjct: 605 agctgcttgccggcgaaaatcaatcgctgctgatcaggagggataccctccttgtcctgg 546 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| | ||||||||||||||| ||| | || |||| |||| || |||||||||||| Sbjct: 545 atcttggacttgacgttgtcgatagtgtcggatgactcgacctcaagggtgatggtcttg 486 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || |||| || ||||||| || || | ||||||||||| ||||||||| || ||||||| Sbjct: 485 ccggtcaagg-tcttgacgaaaatttgcataccaccac-gaaggcggaggacgaggtgga 428 Query: 348 gggtngactccttntggatgttg 370 | || |||||||| ||||||||| Sbjct: 427 gagtcgactccttctggatgttg 405 Score = 163 bits (82), Expect = 5e-37 Identities = 205/248 (82%), Gaps = 2/248 (0%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||||| ||| | || |||||||||| ||||||||||||||||||| Sbjct: 422 gactccttctggatgttgtagtcggagagggtgcggccatcctcgagctgcttgccggcg 363 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 ||||| | |||||||| || ||||||||||||| ||||| ||||||||| | ||| || Sbjct: 362 aaaatcaatcgctgctgatcaggagggatgccctccttgtcctggatcttggacttcaca 303 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttctt 302 |||||||||||| | || |||| |||| || |||||||||||||| || |||| |||| Sbjct: 302 ttgtcgatggtgtcggatgactcgacctcgagggtgatggtcttgcctgtgaggg-tctt 244 Query: 303 gacnaanatctncataccaccacanaaggcggagcaccaggtggagggtngactccttnt 362 ||| || || | |||||| |||| ||| ||||| || |||||||| || |||||||| | Sbjct: 243 gacgaagatttgcataccgccac-gaagacggaggacgaggtggagagtcgactccttct 185 Query: 363 ggatgttg 370 | |||||| Sbjct: 184 gaatgttg 177 Score = 115 bits (58), Expect = 1e-22 Identities = 109/128 (85%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||| ||||||| || | || |||||||||| ||||||||||||||||||| Sbjct: 194 gactccttctgaatgttgtaatcggagagggtgcggccatcctcgagctgcttgccggcg 135 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 ||||| | |||||||| || ||||||||||||| ||||| ||| ||||| | ||||||| Sbjct: 134 aaaatcaatcgctgctgatcaggagggatgccctccttgtcctgaatcttggacttgacg 75 Query: 243 ttgtcgat 250 |||||||| Sbjct: 74 ttgtcgat 67
>gb|AY297059.1| Triticum aestivum ubiquitin (WUB1) mRNA, complete cds Length = 450 Score = 176 bits (89), Expect = 3e-41 Identities = 187/223 (83%) Strand = Plus / Minus Query: 76 caggcncttacttgccaccacgcaggctangcaccaggtgaagggtagactncttctgga 135 ||||| |||||| ||||||||| || | |||||| ||||||||| |||| |||||||| Sbjct: 241 caggcacttactggccaccacggagacggagcaccaagtgaagggtggactccttctgga 182 Query: 136 tgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgct 195 |||| | ||| | || |||||||||| ||| |||||||| || ||||| || ||||||| Sbjct: 181 tgttatagtccgccagggtgcggccatcctcaagctgcttaccagcgaagatcaggcgct 122 Query: 196 gctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgn 255 |||||||||| || ||||||| ||||| |||||| |||||||| || |||||||||||| Sbjct: 121 gctggtccgggggaatgccctccttgtcctggattttcgccttcacattgtcgatggtgt 62 Query: 256 cagaggactncaccttcagtgtgatggtcttgcccgtcagggt 298 ||||||||| |||| ||| |||||||||||||| || ||||| Sbjct: 61 cagaggactcaacctccagggtgatggtcttgccggtgagggt 19
>gb|U29161.1|ZMU29161 Zea mays clone MubG7 ubiquitin fusion protein gene, complete cds Length = 2985 Score = 176 bits (89), Expect = 3e-41 Identities = 165/193 (85%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| |||||||||||||| ||| | || |||||||| | || Sbjct: 2139 gcaccaggtggagggtggactccttctggatgttgtagtcggcgagggtgcggccgtcct 2080 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||||||||| || || |||||||||||||| |||||||||| ||||| || Sbjct: 2079 cgagctgcttgccggcgaagattagccgctgctggtccggcgggatgccctccttgtcct 2020 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 | ||||| ||||| ||||||||||||||| | ||||||| ||||| || ||||| || | Sbjct: 2019 gtatcttggccttcacgttgtcgatggtgtccgaggactccacctccaacgtgatcgttt 1960 Query: 286 tgcccgtcagggt 298 | ||||||||||| Sbjct: 1959 tccccgtcagggt 1947 Score = 71.9 bits (36), Expect = 1e-09 Identities = 40/42 (95%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 2146 aggcggagcaccaggtggagggtggactccttctggatgttg 2105
>gb|M68937.1|MZEUBFA Zea mays ubiquitin fusion protein (UBF9) gene, complete cds Length = 1624 Score = 176 bits (89), Expect = 3e-41 Identities = 165/193 (85%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| |||||||||||||| ||| | || |||||||| | || Sbjct: 1117 gcaccaggtggagggtggactccttctggatgttgtagtcggcgagggtgcggccgtcct 1058 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||||||||| || || |||||||||||||| |||||||||| ||||| || Sbjct: 1057 cgagctgcttgccggcgaagattagccgctgctggtccggcgggatgccctccttgtcct 998 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 | ||||| ||||| ||||||||||||||| | ||||||| ||||| || ||||| || | Sbjct: 997 gtatcttggccttcacgttgtcgatggtgtccgaggactccacctccaacgtgatcgttt 938 Query: 286 tgcccgtcagggt 298 | ||||||||||| Sbjct: 937 tccccgtcagggt 925 Score = 71.9 bits (36), Expect = 1e-09 Identities = 40/42 (95%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1124 aggcggagcaccaggtggagggtggactccttctggatgttg 1083
>gb|AY103543.1| Zea mays PCO110026 mRNA sequence Length = 1623 Score = 174 bits (88), Expect = 1e-40 Identities = 203/243 (83%), Gaps = 2/243 (0%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||| ||||||| ||| | || ||||| |||| ||| | |||||||||||| ||||| Sbjct: 541 cttctgaatgttgtagtcggccagcgtgcgcccatcctccaactgcttgccggcaaaaat 482 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| || |||||||||||||||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 481 gagacgttgctggtccggagggatgccctccttgtcctggatctttgccttgacattgtc 422 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacna 307 |||||| | ||||||| ||||| || ||||| |||||||| |||| || ||||||| | Sbjct: 421 aatggtgtctgaggactccacctcaagggtgattgtcttgccagtcaagg-tcttgacaa 363 Query: 308 anatctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatg 367 | |||| ||| || || | |||||| ||||||| ||||||||| |||||||| |||||| Sbjct: 362 agatctgcatgcctcc-cctaaggcgcagcaccaagtggagggttgactccttctggatg 304 Query: 368 ttg 370 ||| Sbjct: 303 ttg 301 Score = 153 bits (77), Expect = 5e-34 Identities = 162/193 (83%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||| ||| ||||| |||| |||||||||||||| ||| | || ||||| || | || Sbjct: 335 gcaccaagtggagggttgactccttctggatgttgtagtcagcaagtgtgcgtccgtcct 276 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| || || ||||||||||| ||||||||||||| ||||| || Sbjct: 275 caagctgcttgccggcgaagataagccgctgctggtcaggagggatgccctccttgtcct 216 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| |||||| |||| |||| ||||| || ||||| |||| Sbjct: 215 ggatcttagccttgacattgtcaatggtgtcagaagactccacctcgagggtgatagtct 156 Query: 286 tgcccgtcagggt 298 |||| || ||||| Sbjct: 155 tgccggtgagggt 143 Score = 149 bits (75), Expect = 7e-33 Identities = 216/265 (81%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| || ||||||||| |||| ||||| || ||||| |||| || Sbjct: 1247 gcaccaggtggagggtgctctccttctggatattgtagtctgcaagggtgcgaccatcct 1188 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| || || ||||||||||| || || || |||| ||||| || Sbjct: 1187 ccagctgcttgccggcgaagatcagacgctgctggtctgggggaatcccctccttgtcct 1128 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| ||||||||||||||| ||||| || |||| ||| || ||||||| Sbjct: 1127 ggatcttagccttcacgttgtcgatggtgtcagagctctcaacctccagggttatggtct 1068 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| |||| || |||| || || |||| |||||| || | |||||||||||||| || Sbjct: 1067 tgccagtcaagg-tcttcacaaagatctgcataccgcc-cctcaggcggagcaccagatg 1010 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||| ||||||||| Sbjct: 1009 gagggtgctctccttctggatgttg 985 Score = 133 bits (67), Expect = 4e-28 Identities = 214/265 (80%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| || |||||| ||||||| || | || ||||| |||| || Sbjct: 791 gcaccaggtggagggtgctctccttctgaatgttgtaatccgcaagggtgcgtccatcct 732 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | |||||||||||||| || || || |||||||||||||| |||||||||| ||||| || Sbjct: 731 ccagctgcttgccggcaaagataagacgctgctggtccggcgggatgccctccttgtcct 672 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| ||||| | || |||| ||||| || |||||||||| Sbjct: 671 ggatcttggccttgacattgtcaatggtatctgaagactccacctcaagagtgatggtct 612 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| || |||||| || || || |||| ||||||||| | ||| || ||||||| ||| Sbjct: 611 tgccagtaagggtt-ttcacaaagatctgcataccacc-cctaagacgcagcaccaagtg 554 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||| || |||||| Sbjct: 553 gagggtgctctccttctgaatgttg 529 Score = 115 bits (58), Expect = 1e-22 Identities = 138/167 (82%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| |||| || ||||| |||| ||| ||||||||||||||||| || Sbjct: 997 cttctggatgttgtaatctgcaagggtgcgaccatcctccagctgcttgccggcgaagat 938 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| |||||||||||||| ||||| |||| ||||| ||||||||| ||||| || || || Sbjct: 937 gagccgctgctggtccggggggataccctccttgtcctggatcttggccttcacattatc 878 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtca 294 |||||| | ||| || |||| || |||||||||||||| |||| Sbjct: 877 aatggtgtcggagctctcaacctccaaggtgatggtcttgccagtca 831 Score = 42.1 bits (21), Expect = 1.2 Identities = 31/35 (88%) Strand = Plus / Minus Query: 332 cggagcaccaggtggagggtngactccttntggat 366 |||||||||||||||||||| |||||| ||||| Sbjct: 1251 cggagcaccaggtggagggtgctctccttctggat 1217
>gb|BT016652.1| Zea mays clone Contig485 mRNA sequence Length = 1253 Score = 172 bits (87), Expect = 5e-40 Identities = 219/265 (82%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| || |||||||||||||| ||| | || |||||||||| || Sbjct: 522 gcaccaggtggagggtgctctccttctggatgttgtagtccgccagggtgcggccatcct 463 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| |||||||||||||||||||| |||||||||| ||||| || Sbjct: 462 ccagctgcttgccggcgaagatgaggcgctgctggtccggtgggatgccctccttgtcct 403 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| ||||| | || |||| ||||| || ||||| |||| Sbjct: 402 ggatcttggccttgacattgtcaatggtatccgaagactccacctcaagggtgattgtct 343 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| || || | |||| || || |||| ||| ||||| | || |||||||||||||| Sbjct: 342 tgccagtgagtg-tcttcacaaagatctgcatgccacc-cctgagacggagcaccaggtg 285 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||| ||||||||| Sbjct: 284 gagggtgctctccttctggatgttg 260 Score = 153 bits (77), Expect = 5e-34 Identities = 162/193 (83%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| || |||||||||||||| || | || |||||||||| || Sbjct: 294 gcaccaggtggagggtgctctccttctggatgttgtaatccgcaagggtgcggccatcct 235 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| ||||| || | |||||||||||||| |||||||||| ||||| || Sbjct: 234 ccagctgcttgccagcgaagatcaaacgctgctggtccggtgggatgccctccttgtcct 175 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||||||||||||||||||| | || |||| ||||| || ||||| |||| Sbjct: 174 ggatcttggccttgacgttgtcgatggtgtctgaagactccacctcgagggtgatagtct 115 Query: 286 tgcccgtcagggt 298 |||| |||||||| Sbjct: 114 tgccagtcagggt 102 Score = 143 bits (72), Expect = 5e-31 Identities = 227/281 (80%), Gaps = 2/281 (0%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| |||| |||||||||| ||||| || ||| |||||||||| ||||| Sbjct: 994 ccaccacggaggcggagcaccaggtggagggtgctctccttttggatgttgtagtctgct 935 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 | |||||||||| ||| ||||| ||||||||||| || || |||||||||||||| ||| Sbjct: 934 aaggtgcggccatcctccagctgtttgccggcgaagatcagacgctgctggtccgggggg 875 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| ||||||||||||||| || |||||||||||| | ||| || ||| Sbjct: 874 atgccctccttgtcctggatcttcgccttcacattgtcgatggtgtccgagctctcaacc 815 Query: 270 ttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaa 329 | ||| || ||||| || || ||||||| |||| || || |||| ||||||||| | | Sbjct: 814 tccagggttatggtttttccagtcaggg-tcttcacaaagatctgcataccacc-cctga 757 Query: 330 ggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||| || ||||| ||||| |||||| ||||||||| Sbjct: 756 ggcggagaacaaggtgaagggtactctccttctggatgttg 716 Score = 139 bits (70), Expect = 7e-30 Identities = 211/260 (81%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 |||||||||||| || |||||||||||||| ||| | || ||||| |||| ||| ||| Sbjct: 745 aggtgaagggtactctccttctggatgttgtagtccgcgagggtgcgaccatcctccagc 686 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| || || || || ||||||||||| || || ||||||| ||||| ||||||| Sbjct: 685 tgcttgccagcaaagatcagacgctgctggtctgggggaatgccctccttgtcctggatc 626 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| || ||||| |||||| ||||| || ||||| || |||||||||||||| Sbjct: 625 ttggccttcacattgtcaatggtgtcagagctctccacctccaaggtgatggtcttgcca 566 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 |||| | |||| || || |||| ||| ||||| | |||||||||||||||||||||| Sbjct: 565 gtcaatg-tcttcacaaaaatctgcatgccacc-cctgaggcggagcaccaggtggaggg 508 Query: 351 tngactccttntggatgttg 370 | |||||| ||||||||| Sbjct: 507 tgctctccttctggatgttg 488
>gb|BT016274.1| Zea mays clone Contig107 mRNA sequence Length = 1486 Score = 172 bits (87), Expect = 5e-40 Identities = 219/265 (82%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| || |||||||||||||| ||| | || |||||||| | || Sbjct: 774 gcaccaggtggagggtgctctccttctggatgttgtagtcggccagggtgcggccgtcct 715 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | |||||||| || || || ||||| ||||||||||| ||||||||||||| ||||| || Sbjct: 714 caagctgcttcccagcaaagatgagccgctgctggtctggagggatgccctccttgtcct 655 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||||||||| |||||| ||||||||| ||||| || ||||| |||| Sbjct: 654 ggatcttggccttgacgttgtcaatggtgtcagaggactccacctcgagggtgatagtct 595 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| ||||||||| || || || |||| ||| || || | ||||||||||| ||||| Sbjct: 594 tgccggtcagggtt-ttcacaaagatctgcatgcctcc-cctgaggcggagcacaaggtg 537 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||| ||||||||| Sbjct: 536 gagggtgctctccttctggatgttg 512 Score = 135 bits (68), Expect = 1e-28 Identities = 195/239 (81%), Gaps = 2/239 (0%) Strand = Plus / Minus Query: 132 tggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaatgagg 191 |||||||||| ||||| | |||||||||| ||| ||||| ||||||||||| || || Sbjct: 1204 tggatgttgtagtctgctaaggtgcggccatcctccagctgtttgccggcgaagatcaga 1145 Query: 192 cgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtcgatg 251 |||||||||||||| |||||||||| ||||| ||||||||||||||| || ||||||||| Sbjct: 1144 cgctgctggtccggggggatgccctccttgtcctggatcttcgccttcacattgtcgatg 1085 Query: 252 gtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacnaanat 311 ||| | ||| || |||| ||| || ||||| || || ||||||| |||| || || || Sbjct: 1084 gtgtccgagctctcaacctccagggttatggtttttccagtcaggg-tcttcacaaagat 1026 Query: 312 ctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatgttg 370 || ||||||||| | |||||||| || ||||| ||||| |||||| ||||||||| Sbjct: 1025 ctgcataccacc-cctgaggcggagaacaaggtgaagggtactctccttctggatgttg 968 Score = 131 bits (66), Expect = 2e-27 Identities = 210/260 (80%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 |||||||||||| || |||||||||||||| ||| | || ||||| |||| ||| ||| Sbjct: 997 aggtgaagggtactctccttctggatgttgtagtccgcgagggtgcgaccatcctccagc 938 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| || || || || ||||||||||| || || ||||||| ||||| ||||||| Sbjct: 937 tgcttgccagcaaagatcagacgctgctggtctgggggaatgccctccttgtcctggatc 878 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| || ||||| |||||| ||||| || ||||| || |||||||||||||| Sbjct: 877 ttggccttcacattgtcaatggtgtcagagctctccacctccaaggtgatggtcttgcca 818 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 |||| | |||| || || |||| ||| || || | |||||||||||||||||||||| Sbjct: 817 gtcaatg-tcttcacgaagatctgcatgcctcc-cctgaggcggagcaccaggtggaggg 760 Query: 351 tngactccttntggatgttg 370 | |||||| ||||||||| Sbjct: 759 tgctctccttctggatgttg 740 Score = 42.1 bits (21), Expect = 1.2 Identities = 34/39 (87%) Strand = Plus / Minus Query: 332 cggagcaccaggtggagggtngactccttntggatgttg 370 |||||||| ||||||||||| |||||| ||||||||| Sbjct: 1234 cggagcacaaggtggagggtgctctccttttggatgttg 1196
>emb|AJ000660.1|PB660UB Phreatamoeba balamuthi UBI6 sequence, putative polyubiquitin gene Length = 187 Score = 172 bits (87), Expect = 5e-40 Identities = 146/168 (86%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | ||||||||||| | |||||||||||| |||||||| || Sbjct: 169 cttctggatgttgtagtcggccagagtgcggccgtcctcgagctgctttccggcgaagat 110 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 |||||||||||||||||| |||||||||| ||||| |||||||||| ||| |||||||| Sbjct: 109 gaggcgctgctggtccggggggatgccctccttgtcctggatcttctgcttcacgttgtc 50 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcag 295 ||| | | | |||| || ||||| ||| |||||||||||||||||||| Sbjct: 49 gatcgagtccgagggctccacctccagagtgatggtcttgcccgtcag 2
>emb|AJ000657.1|PB657UB Phreatamoeba balamuthi UBI3 sequence, putative polyubiquitin gene Length = 187 Score = 172 bits (87), Expect = 5e-40 Identities = 146/168 (86%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | || |||||||| | | |||||||||| |||||||| || Sbjct: 169 cttctggatgttgtagtccgcgagcgtgcggccgtccccgagctgctttccggcgaagat 110 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||| Sbjct: 109 gaggcgctgctggtccggagggatgccctccttgtcctggatcttctgcttgacgttgtc 50 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcag 295 |||| || | |||| || ||||| ||| ||||| |||||||||||||| Sbjct: 49 gatgctgtccgagggctccacctccagcgtgatcgtcttgcccgtcag 2
>gb|AY748811.1| Thaumatomonas sp. DDM-2005 polyubiquitin (UBQ) gene, partial cds Length = 306 Score = 172 bits (87), Expect = 5e-40 Identities = 177/210 (84%) Strand = Plus / Minus Query: 89 gccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctgg 148 |||||| ||||||| |||| ||||||||||| |||| |||||||||||||| ||| | Sbjct: 228 gccaccgcgcaggcggagcacgaggtgaagggttgactccttctggatgttgtagtcggc 169 Query: 149 nagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggagg 208 || || || |||| |||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 168 gagcgtacgaccatcttcgagctgcttgccggcgaagatgaggcgctgctggtcaggagg 109 Query: 209 gatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncac 268 |||||||| ||||| |||||||||| ||||||||| ||||||||| | ||||||| || Sbjct: 108 gatgccctccttgtcctggatcttctgcttgacgttctcgatggtgtccgaggactcgac 49 Query: 269 cttcagtgtgatggtcttgcccgtcagggt 298 | || |||||||| |||||||| ||||| Sbjct: 48 atcgagggtgatggttttgcccgtgagggt 19 Score = 56.0 bits (28), Expect = 8e-05 Identities = 38/42 (90%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||| ||||| ||||| |||||||| ||||||||| Sbjct: 218 aggcggagcacgaggtgaagggttgactccttctggatgttg 177
>gb|BT016552.1| Zea mays clone Contig385 mRNA sequence Length = 700 Score = 170 bits (86), Expect = 2e-39 Identities = 162/190 (85%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| |||||| ||||||| ||| | || ||||| || | || Sbjct: 279 gcaccaggtggagggtggactccttctgaatgttgtagtcggcgagggtgcgaccgtcct 220 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||||||||| ||||| |||||||||||||| |||||||||| ||||| || Sbjct: 219 cgagctgcttgccggcgaagatgagccgctgctggtccggggggatgccctccttgtcct 160 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| || ||||| |||||| | ||||||| ||||| || |||||||||| Sbjct: 159 ggatcttggccttcacattgtcaatggtgtcggaggactccacctccaaagtgatggtct 100 Query: 286 tgcccgtcag 295 | |||||||| Sbjct: 99 tccccgtcag 90 Score = 63.9 bits (32), Expect = 3e-07 Identities = 39/42 (92%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||||||||||||| |||||||| || |||||| Sbjct: 286 aggcggagcaccaggtggagggtggactccttctgaatgttg 245
>gb|AF517839.1| Triticum aestivum ubiquitin protein mRNA, partial cds Length = 204 Score = 170 bits (86), Expect = 2e-39 Identities = 156/182 (85%) Strand = Plus / Minus Query: 117 agggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttg 176 ||||| |||| |||||||||||||| ||| | || |||||||||| ||||||||||||| Sbjct: 200 agggtggactccttctggatgttgtagtcagccagggtgcggccatcctcgagctgcttg 141 Query: 177 ccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgcc 236 ||||| || || ||||||||||||||||| |||||||||| ||||| ||||||||| ||| Sbjct: 140 ccggcaaagatcaggcgctgctggtccggggggatgccctccttgtcctggatcttggcc 81 Query: 237 ttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagg 296 || || ||||| |||||| | ||||||| |||| ||| |||||||||||||| || ||| Sbjct: 80 ttcacattgtcaatggtgtctgaggactcaacctccagggtgatggtcttgccggtgagg 21 Query: 297 gt 298 || Sbjct: 20 gt 19
>gb|AF517849.1| Griffithsia japonica isolate Gj532 polyubiquitin mRNA, partial cds Length = 681 Score = 170 bits (86), Expect = 2e-39 Identities = 218/264 (82%), Gaps = 2/264 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 ||||||| || || || |||| |||||||||||||| ||| | || |||||||| | | Sbjct: 566 gcaccagatggagcgtcgactccttctggatgttgtagtcggacagggtgcggccgtctt 507 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||| | || Sbjct: 506 cgagctgcttgccagcgaaaatgagacgctgctggtccggagggatgccctccttatcct 447 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||||| ||||||||| || || ||| |||| |||| |||| || |||||||||| Sbjct: 446 ggatcttcgtcttgacgttttcaatcgtgtcagacgactcgacctcgagcgtgatggtct 387 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| || || | ||||||| || |||| ||| || |||| || ||||||||||| || Sbjct: 386 tgccggtgagtg-tcttgacgaaaatctgcatgcctccac-gcagacggagcaccagatg 329 Query: 346 gagggtngactccttntggatgtt 369 ||||| |||||||| |||||||| Sbjct: 328 aagggtcgactccttctggatgtt 305 Score = 117 bits (59), Expect = 3e-23 Identities = 172/212 (81%), Gaps = 1/212 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 ||||||| |||||||| |||| |||||||||||| | ||| | || |||||||| | || Sbjct: 338 gcaccagatgaagggtcgactccttctggatgttatagtcggacagggtgcggccgtcct 279 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||| |||||||| || ||||| |||||||||||||||||||| |||| ||||| || Sbjct: 278 cgagctgtttgccggcaaagatgagacgctgctggtccggagggataccctccttgtcct 219 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 | ||||| | |||||| || || ||||| | || |||| |||| || |||||||||| Sbjct: 218 gaatcttggtcttgacattctcaatggtatccgacgactcgacctcgagggtgatggtct 159 Query: 286 tgcccgtcagggttcttgacnaanatctncat 317 | || || |||| ||||||| || |||| ||| Sbjct: 158 ttccggtgaggg-tcttgacgaagatctgcat 128 Score = 56.0 bits (28), Expect = 8e-05 Identities = 38/42 (90%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 |||||||||||||| ||||| || |||||||| ||||||||| Sbjct: 573 aggcggagcaccagatggagcgtcgactccttctggatgttg 532
>gb|AF517848.1| Griffithsia japonica isolate Gj526 polyubiquitin mRNA, partial cds Length = 741 Score = 170 bits (86), Expect = 2e-39 Identities = 218/264 (82%), Gaps = 2/264 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 ||||||| || || || |||| |||||||||||||| ||| | || |||||||| | | Sbjct: 490 gcaccagatggagcgtcgactccttctggatgttgtagtcggacagggtgcggccgtctt 431 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||| | || Sbjct: 430 cgagctgcttgccagcgaaaatgagacgctgctggtccggagggatgccctccttatcct 371 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||||| ||||||||| || || ||| |||| |||| |||| || |||||||||| Sbjct: 370 ggatcttcgtcttgacgttttcaatcgtgtcagacgactcgacctcgagcgtgatggtct 311 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| || || | ||||||| || |||| ||| || |||| || ||||||||||| || Sbjct: 310 tgccggtgagtg-tcttgacgaaaatctgcatgcctccac-gcagacggagcaccagatg 253 Query: 346 gagggtngactccttntggatgtt 369 ||||| |||||||| |||||||| Sbjct: 252 aagggtcgactccttctggatgtt 229 Score = 165 bits (83), Expect = 1e-37 Identities = 218/265 (82%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 ||||||| || || || |||| |||||||||||||| ||| | || |||||||| | | Sbjct: 718 gcaccagatggagcgtcgactccttctggatgttgtagtcggacagggtgcggccgtctt 659 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||| | || Sbjct: 658 cgagctgcttgccagcgaaaatgagacgctgctggtccggagggatgccctccttatcct 599 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||||| ||||||||| || || ||| | || |||| ||||| || ||||| |||| Sbjct: 598 ggatcttcgtcttgacgttttcaatcgtgtccgacgactccacctcgagggtgatagtct 539 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| || || | ||||||| || |||| ||| || |||| || ||||||||||| || Sbjct: 538 tgccggtgagtg-tcttgacgaaaatctgcatgcctccac-gcagacggagcaccagatg 481 Query: 346 gagggtngactccttntggatgttg 370 ||| || |||||||| ||||||||| Sbjct: 480 gagcgtcgactccttctggatgttg 456 Score = 117 bits (59), Expect = 3e-23 Identities = 172/212 (81%), Gaps = 1/212 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 ||||||| |||||||| |||| |||||||||||| | ||| | || |||||||| | || Sbjct: 262 gcaccagatgaagggtcgactccttctggatgttatagtcggacagggtgcggccgtcct 203 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||| |||||||| || ||||| |||||||||||||||||||| |||| ||||| || Sbjct: 202 cgagctgtttgccggcaaagatgagacgctgctggtccggagggataccctccttgtcct 143 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 | ||||| | |||||| || || ||||| | || |||| |||| || |||||||||| Sbjct: 142 gaatcttggtcttgacattctcaatggtatccgacgactcgacctcgagggtgatggtct 83 Query: 286 tgcccgtcagggttcttgacnaanatctncat 317 | || || |||| ||||||| || |||| ||| Sbjct: 82 ttccggtgaggg-tcttgacgaagatctgcat 52 Score = 56.0 bits (28), Expect = 8e-05 Identities = 38/42 (90%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 |||||||||||||| ||||| || |||||||| ||||||||| Sbjct: 725 aggcggagcaccagatggagcgtcgactccttctggatgttg 684
>emb|X60826.1|CRUBI3 C.reinhardtii UBI3 mRNA for ubiquitin-fusion protein (UbCEP52) Length = 730 Score = 168 bits (85), Expect = 8e-39 Identities = 164/193 (84%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| |||||||||||||| ||| | || |||||||| | || Sbjct: 217 gcaccaggtggagggtggactccttctggatgttgtagtccgccagggtgcggccgtcct 158 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| || || ||||||||||||||||||||||||| ||||| || Sbjct: 157 ccagctgcttgccggcgaagatcagacgctgctggtccggagggatgccctccttgtcct 98 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 | ||||| ||||| || || ||||||||| | || |||| ||||| ||| |||||||||| Sbjct: 97 gaatcttggccttcacattctcgatggtgtccgaagactccacctccagggtgatggtct 38 Query: 286 tgcccgtcagggt 298 | ||||| ||||| Sbjct: 37 tacccgtgagggt 25 Score = 60.0 bits (30), Expect = 5e-06 Identities = 34/36 (94%) Strand = Plus / Minus Query: 335 agcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||||||| |||||||| ||||||||| Sbjct: 218 agcaccaggtggagggtggactccttctggatgttg 183
>dbj|D63782.1|CRUPUQ Cricetulus sp. gene for polyubiquitin, complete cds Length = 8730 Score = 168 bits (85), Expect = 8e-39 Identities = 217/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| |||||||||| |||||||||||||| ||| | || |||||||||| || Sbjct: 6722 accaggtgcagggtagactccttctggatgttgtagtcggacagggtgcggccatcttcc 6663 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 6662 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 6603 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||||||| Sbjct: 6602 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggtcttg 6543 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 6542 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 6485 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 6484 gggtagactccttctggatgttg 6462 Score = 161 bits (81), Expect = 2e-36 Identities = 216/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| |||||||||| |||||||||||||| ||| | || |||||||||| || Sbjct: 7862 accaggtgcagggtagactccttctggatgttgtagtcggacagggtgcggccatcttcc 7803 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 7802 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctgcttgtcctgg 7743 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| || ||||||||| Sbjct: 7742 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggttatggtcttg 7683 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 7682 cctgtcaggg-tctttacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 7625 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 7624 gggtggactccttctggatgttg 7602 Score = 161 bits (81), Expect = 2e-36 Identities = 216/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 7406 accaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccatcttcc 7347 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 7346 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 7287 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||||||| Sbjct: 7286 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggtcttg 7227 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 7226 cctgtcaggg-tctttacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 7169 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 7168 gggtggactccttctggatgttg 7146 Score = 161 bits (81), Expect = 2e-36 Identities = 216/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 7178 accaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccatcttcc 7119 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 7118 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 7059 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||||||| Sbjct: 7058 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggtcttg 6999 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 6998 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 6941 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 6940 gggtggactccttctggatgttg 6918 Score = 161 bits (81), Expect = 2e-36 Identities = 216/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 6950 accaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccatcttcc 6891 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 6890 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 6831 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||||||| Sbjct: 6830 atctttgccttgacattctcgatggtgtcactgggctcaacctccagggtgatggtcttg 6771 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 6770 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 6713 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 6712 gggtagactccttctggatgttg 6690 Score = 153 bits (77), Expect = 5e-34 Identities = 215/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| |||||||||| |||||||||||||| ||| | || |||||||||| || Sbjct: 6494 accaggtgcagggtagactccttctggatgttgtagtcggacagggtgcggccatcttcc 6435 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 6434 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 6375 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||| || Sbjct: 6374 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggttttc 6315 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 6314 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 6257 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 6256 gggtagactccttctggatgttg 6234 Score = 149 bits (75), Expect = 7e-33 Identities = 160/191 (83%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| |||||||||| |||||||||||||| ||| | || |||||||||| || Sbjct: 6266 accaggtgcagggtagactccttctggatgttgtagtcggacagggtgcggccatcttcc 6207 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 6206 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 6147 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||||||| Sbjct: 6146 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggtcttg 6087 Query: 288 cccgtcagggt 298 || |||||||| Sbjct: 6086 cctgtcagggt 6076 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 7634 accaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccatcttcc 7575 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 7574 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 7515 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||||||| Sbjct: 7514 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggtcttg 7455 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||||| || || || |||| ||| ||||| | || | ||| |||||||| | Sbjct: 7454 cctgtcagggtt-ttcacaaagatctgcatcccacc-cctgagcctgaggaccaggtgca 7397 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 7396 gggtggactccttctggatgttg 7374 Score = 67.9 bits (34), Expect = 2e-08 Identities = 87/104 (83%), Gaps = 2/104 (1%) Strand = Plus / Minus Query: 267 accttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccaca 326 |||| ||| |||||||||||||| ||||||| |||| || || |||| ||| ||||| | Sbjct: 7931 acctccagggtgatggtcttgcctgtcaggg-tcttcacaaagatctgcatcccacc-cc 7874 Query: 327 naaggcggagcaccaggtggagggtngactccttntggatgttg 370 |||||||| |||||||| ||||| |||||||| ||||||||| Sbjct: 7873 tgaggcggaggaccaggtgcagggtagactccttctggatgttg 7830
>dbj|AB003732.1| Cricetulus griseus gene for polyubiquitin, complete cds Length = 3273 Score = 168 bits (85), Expect = 8e-39 Identities = 217/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| |||||||||| |||||||||||||| ||| | || |||||||||| || Sbjct: 490 accaggtgcagggtagactccttctggatgttgtagtcggacagggtgcggccatcttcc 431 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 430 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 371 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||||||| Sbjct: 370 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggtcttg 311 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 310 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 253 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 252 gggtggactccttctggatgttg 230 Score = 161 bits (81), Expect = 2e-36 Identities = 216/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| |||||||||| |||||||||||||| ||| | || |||||||||| || Sbjct: 2998 accaggtgcagggtagactccttctggatgttgtagtcggacagggtgcggccatcttcc 2939 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 2938 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 2879 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||| ||| Sbjct: 2878 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggttttg 2819 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 2818 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 2761 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 2760 gggtggactccttctggatgttg 2738 Score = 161 bits (81), Expect = 2e-36 Identities = 216/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 2770 accaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccatcttcc 2711 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 2710 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 2651 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||||||| Sbjct: 2650 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggtcttg 2591 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 2590 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 2533 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 2532 gggtggactccttctggatgttg 2510 Score = 161 bits (81), Expect = 2e-36 Identities = 216/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 2542 accaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccatcttcc 2483 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 2482 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 2423 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||||||| Sbjct: 2422 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggtcttg 2363 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 2362 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 2305 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 2304 gggtggactccttctggatgttg 2282 Score = 161 bits (81), Expect = 2e-36 Identities = 216/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 2314 accaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccatcttcc 2255 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 2254 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 2195 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||||||| Sbjct: 2194 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggtcttg 2135 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 2134 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 2077 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 2076 gggtggactccttctggatgttg 2054 Score = 161 bits (81), Expect = 2e-36 Identities = 216/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 1630 accaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccatcttcc 1571 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 1570 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 1511 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||||||| Sbjct: 1510 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggtcttg 1451 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 1450 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 1393 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 1392 gggtggactccttctggatgttg 1370 Score = 161 bits (81), Expect = 2e-36 Identities = 216/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 1402 accaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccatcttcc 1343 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 1342 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 1283 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||||||| Sbjct: 1282 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggtcttg 1223 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 1222 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 1165 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 1164 gggtggactccttctggatgttg 1142 Score = 161 bits (81), Expect = 2e-36 Identities = 216/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 1174 accaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccatcttcc 1115 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 1114 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 1055 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||||||| Sbjct: 1054 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggtcttg 995 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 994 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 937 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 936 gggtggactccttctggatgttg 914 Score = 161 bits (81), Expect = 2e-36 Identities = 216/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 946 accaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccatcttcc 887 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 886 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 827 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||||||| Sbjct: 826 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggtcttg 767 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 766 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 709 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 708 gggtggactccttctggatgttg 686 Score = 161 bits (81), Expect = 2e-36 Identities = 216/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 718 accaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccatcttcc 659 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 658 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 599 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||||||| Sbjct: 598 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggtcttg 539 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 538 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 481 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 480 gggtagactccttctggatgttg 458 Score = 153 bits (77), Expect = 5e-34 Identities = 215/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 2086 accaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccatcttcc 2027 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 2026 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 1967 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||||||| Sbjct: 1966 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggtcttg 1907 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 1906 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 1849 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| |||| |||| Sbjct: 1848 gggtagactccttctggacgttg 1826 Score = 153 bits (77), Expect = 5e-34 Identities = 215/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| |||||||||| |||||||| ||||| ||| | || |||||||||| || Sbjct: 1858 accaggtgcagggtagactccttctggacgttgtagtcggacagggtgcggccatcttcc 1799 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 1798 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 1739 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||| ||| Sbjct: 1738 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggttttg 1679 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 1678 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 1621 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 1620 gggtggactccttctggatgttg 1598 Score = 133 bits (67), Expect = 4e-28 Identities = 158/191 (82%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 262 accaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccatcttcc 203 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 202 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 143 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||| ||| Sbjct: 142 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggttttg 83 Query: 288 cccgtcagggt 298 || |||||||| Sbjct: 82 cctgtcagggt 72 Score = 67.9 bits (34), Expect = 2e-08 Identities = 87/104 (83%), Gaps = 2/104 (1%) Strand = Plus / Minus Query: 267 accttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccaca 326 |||| ||| |||||||||||||| ||||||| |||| || || |||| ||| ||||| | Sbjct: 3067 acctccagggtgatggtcttgcctgtcaggg-tcttcacaaagatctgcatcccacc-cc 3010 Query: 327 naaggcggagcaccaggtggagggtngactccttntggatgttg 370 |||||||| |||||||| ||||| |||||||| ||||||||| Sbjct: 3009 tgaggcggaggaccaggtgcagggtagactccttctggatgttg 2966
>dbj|AB003731.1| Cricetulus griseus gene for polyubiquitin, complete cds Length = 2817 Score = 168 bits (85), Expect = 8e-39 Identities = 217/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| |||||||||| |||||||||||||| ||| | || |||||||||| || Sbjct: 2542 accaggtgcagggtagactccttctggatgttgtagtcggacagggtgcggccatcttcc 2483 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 2482 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 2423 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||||||| Sbjct: 2422 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggtcttg 2363 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 2362 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 2305 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 2304 gggtggactccttctggatgttg 2282 Score = 168 bits (85), Expect = 8e-39 Identities = 217/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 2314 accaggtgcagggtggactccttctggatgttgtagtcagacagagtgcggccatcttcc 2255 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 2254 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 2195 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||||||| Sbjct: 2194 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggtcttg 2135 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 2134 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 2077 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 2076 gggtggactccttctggatgttg 2054 Score = 161 bits (81), Expect = 2e-36 Identities = 216/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 1858 accaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccatcttcc 1799 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 1798 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 1739 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||||||| Sbjct: 1738 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggtcttg 1679 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 1678 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 1621 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 1620 gggtggactccttctggatgttg 1598 Score = 161 bits (81), Expect = 2e-36 Identities = 216/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 1630 accaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccatcttcc 1571 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 1570 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 1511 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||||||| Sbjct: 1510 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggtcttg 1451 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 1450 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 1393 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 1392 gggtggactccttctggatgttg 1370 Score = 161 bits (81), Expect = 2e-36 Identities = 216/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 1402 accaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccatcttcc 1343 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 1342 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 1283 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||||||| Sbjct: 1282 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggtcttg 1223 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 1222 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 1165 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 1164 gggtggactccttctggatgttg 1142 Score = 161 bits (81), Expect = 2e-36 Identities = 216/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 1174 accaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccatcttcc 1115 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 1114 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 1055 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||||||| Sbjct: 1054 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggtcttg 995 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 994 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 937 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 936 gggtggactccttctggatgttg 914 Score = 161 bits (81), Expect = 2e-36 Identities = 216/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 946 accaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccatcttcc 887 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 886 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 827 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||||||| Sbjct: 826 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggtcttg 767 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 766 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 709 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 708 gggtggactccttctggatgttg 686 Score = 161 bits (81), Expect = 2e-36 Identities = 216/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 718 accaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccatcttcc 659 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 658 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 599 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||||||| Sbjct: 598 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggtcttg 539 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 538 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 481 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 480 gggtggactccttctggatgttg 458 Score = 153 bits (77), Expect = 5e-34 Identities = 215/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 2086 accaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccatcttcc 2027 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 2026 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 1967 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||| ||| Sbjct: 1966 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggttttg 1907 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 1906 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 1849 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 1848 gggtggactccttctggatgttg 1826 Score = 153 bits (77), Expect = 5e-34 Identities = 215/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 490 accaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccatcttcc 431 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || | | ||||||||| || |||||||||| ||||| |||| Sbjct: 430 agctgcttgccggcaaagatcaacctctgctggtcaggggggatgccctccttgtcctgg 371 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||| ||| Sbjct: 370 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggttttg 311 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 310 cctgtcaggg-tcttcacaaagatctgcatcccacc-cctgaggcggaggaccaggtgca 253 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 252 gggtggactccttctggatgttg 230 Score = 133 bits (67), Expect = 4e-28 Identities = 158/191 (82%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 262 accaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccatcttcc 203 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 202 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 143 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || |||| ||| |||||||| ||| Sbjct: 142 atctttgccttgacattctcgatggtgtcactgggctcgacctccagggtgatggttttg 83 Query: 288 cccgtcagggt 298 || |||||||| Sbjct: 82 cctgtcagggt 72 Score = 67.9 bits (34), Expect = 2e-08 Identities = 87/104 (83%), Gaps = 2/104 (1%) Strand = Plus / Minus Query: 267 accttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccaca 326 |||| ||| |||||||||||||| ||||||| |||| || || |||| ||| ||||| | Sbjct: 2611 acctccagggtgatggtcttgcctgtcaggg-tcttcacaaagatctgcatcccacc-cc 2554 Query: 327 naaggcggagcaccaggtggagggtngactccttntggatgttg 370 |||||||| |||||||| ||||| |||||||| ||||||||| Sbjct: 2553 tgaggcggaggaccaggtgcagggtagactccttctggatgttg 2510
>ref|XM_382132.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01956.1) partial mRNA Length = 366 Score = 167 bits (84), Expect = 3e-38 Identities = 160/188 (85%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| |||||||||| |||||||||||||| ||| | || || ||||||| |||| Sbjct: 188 accaggtggagggtagactccttctggatgttgtagtcggagagggttcggccatcctcg 129 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||||||||| || | |||||||| ||||| |||||||||| ||||| |||| Sbjct: 128 agctgcttgccggcgaagatcaatcgctgctgatccggggggatgccctccttgtcctgg 69 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| | |||||| |||||||||||| | || |||| |||| || |||||||||||| Sbjct: 68 atcttggacttgacattgtcgatggtgtccgaagactcgacctcgagggtgatggtcttg 9 Query: 288 cccgtcag 295 |||||||| Sbjct: 8 cccgtcag 1 Score = 58.0 bits (29), Expect = 2e-05 Identities = 36/39 (92%) Strand = Plus / Minus Query: 332 cggagcaccaggtggagggtngactccttntggatgttg 370 ||||| |||||||||||||| |||||||| ||||||||| Sbjct: 194 cggaggaccaggtggagggtagactccttctggatgttg 156
>gb|AY099138.1| Cercomonas edax isolate pub10 polyubiquitin gene, partial cds Length = 532 Score = 167 bits (84), Expect = 3e-38 Identities = 157/184 (85%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||||||||| |||| |||||||||||||| ||| | || |||||||| | || Sbjct: 191 gcacaaggtgaagggtcgactccttctggatgttgtagtcagccagggtgcggccgtcct 132 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||||||||| |||||||||||||| ||||| |||||||||| ||||| || Sbjct: 131 cgagctgcttgccggcgaagatgaggcgctgctgatccggggggatgccctccttgtcct 72 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 |||||||| ||| ||||| ||||| ||| ||||| || ||| | ||| |||||||||| Sbjct: 71 ggatcttctgcttcacgttctcgatcgtgtcagagctctccacgtccagggtgatggtct 12 Query: 286 tgcc 289 |||| Sbjct: 11 tgcc 8 Score = 165 bits (83), Expect = 1e-37 Identities = 178/212 (83%), Gaps = 1/212 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| ||| | || |||||||| | || Sbjct: 425 gcacaaggtgcagggtcgactccttctggatgttgtagtcagccagggtgcggccgtcct 366 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||||||||| |||||||||||||| ||||| |||||||||| ||||| || Sbjct: 365 cgagctgcttgccggcgaagatgaggcgctgctgatccggggggatgccctccttgtcct 306 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 |||||||| ||| ||||| ||||||||| ||||| || ||| | ||| ||||| |||| Sbjct: 305 ggatcttctgcttcacgttctcgatggtgtcagagctctccacgtccagggtgatagtct 246 Query: 286 tgcccgtcagggttcttgacnaanatctncat 317 |||| || |||| ||||||| || |||| ||| Sbjct: 245 tgccggtgaggg-tcttgacgaagatctgcat 215
>gb|AY099135.1| Cercomonas edax isolate pub7 polyubiquitin gene, partial cds Length = 532 Score = 167 bits (84), Expect = 3e-38 Identities = 157/184 (85%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||||||||| |||| |||||||||||||| ||| | || |||||||| | || Sbjct: 191 gcacaaggtgaagggtcgactccttctggatgttgtagtcagccagggtgcggccgtcct 132 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||||||||| |||||||||||||| ||||| |||||||||| ||||| || Sbjct: 131 cgagctgcttgccggcgaagatgaggcgctgctgatccggggggatgccctccttgtcct 72 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 |||||||| ||| ||||| ||||| ||| ||||| || ||| | ||| |||||||||| Sbjct: 71 ggatcttctgcttcacgttctcgatcgtgtcagagctctccacgtccagggtgatggtct 12 Query: 286 tgcc 289 |||| Sbjct: 11 tgcc 8 Score = 165 bits (83), Expect = 1e-37 Identities = 178/212 (83%), Gaps = 1/212 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||||||||| |||| |||||||||||||| ||| | || |||||||| | || Sbjct: 425 gcacaaggtgaagggttgactccttctggatgttgtagtcagccagggtgcggccgtcct 366 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||||||||| ||||||||||| || ||||| |||||||||| ||||| || Sbjct: 365 cgagctgcttgccggcgaagatgaggcgctgttgatccggggggatgccctccttgtcct 306 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 |||||||| ||| ||||| ||||| ||| ||||| || ||| | ||| |||||||||| Sbjct: 305 ggatcttctgcttcacgttctcgatcgtgtcagagctctccacgtccagggtgatggtct 246 Query: 286 tgcccgtcagggttcttgacnaanatctncat 317 |||| || |||| ||||||| || |||| ||| Sbjct: 245 tgccggtgaggg-tcttgacgaagatctgcat 215
>gb|AY099134.1| Cercomonas edax isolate pub6 polyubiquitin gene, partial cds Length = 298 Score = 167 bits (84), Expect = 3e-38 Identities = 157/184 (85%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||||||||| |||| |||||||||||||| ||| | || |||||||| | || Sbjct: 191 gcacaaggtgaagggttgactccttctggatgttgtagtcagccagggtgcggccgtcct 132 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||||||||| |||||||||||||| ||||| |||||||||| ||||| || Sbjct: 131 cgagctgcttgccggcgaagatgaggcgctgctgatccggggggatgccctccttgtcct 72 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 |||||||| ||| ||||| ||||| ||| ||||| || ||| | ||| |||||||||| Sbjct: 71 ggatcttctgcttcacgttctcgatcgtgtcagagctctccacgtccagggtgatggtct 12 Query: 286 tgcc 289 |||| Sbjct: 11 tgcc 8
>gb|U29158.1|ZMU29158 Zea mays polyubiquitin (MubC5) mRNA, complete cds Length = 1381 Score = 167 bits (84), Expect = 3e-38 Identities = 202/243 (83%), Gaps = 2/243 (0%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||||| || |||||||||| ||| |||||||||||||| || || Sbjct: 1127 cttctggatgttgtagtctgctagggtgcggccatcctccagctgcttgccggcaaagat 1068 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 || ||||||||||| ||||||||||||| |||| ||||||||||||||| |||||||| Sbjct: 1067 cagacgctgctggtctggagggatgccctctttgtcctggatcttcgccttcacgttgtc 1008 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacna 307 ||||||| | ||| || |||| ||| || ||||||||||| |||| || |||| || | Sbjct: 1007 gatggtgtcggagctctcaacctccagggttatggtcttgccagtcaagg-tcttcacaa 949 Query: 308 anatctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatg 367 | |||| ||||||||| | || ||||| |||||||||||||| |||||| |||||| Sbjct: 948 agatctgcataccacctcgcaa-gcggacgaccaggtggagggtgctctccttctggatg 890 Query: 368 ttg 370 ||| Sbjct: 889 ttg 887 Score = 143 bits (72), Expect = 5e-31 Identities = 199/243 (81%), Gaps = 2/243 (0%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||| ||||||| ||| | || ||||| || | ||||||||||||||| || || || Sbjct: 443 cttctgaatgttgtagtcggccagcgtgcgcccgtcctcgagctgcttgccagcaaagat 384 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 |||||||||||||||||||| || |||| ||||| ||||||||| |||||||||||||| Sbjct: 383 caggcgctgctggtccggaggaatcccctccttgtcctggatcttggccttgacgttgtc 324 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacna 307 ||||||| |||| |||| ||||| || ||||| ||||| || || |||| ||||||| | Sbjct: 323 gatggtgtcagaagactccacctcgagggtgatagtctttccagtgaggg-tcttgacga 265 Query: 308 anatctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatg 367 | |||| ||| || || | |||||||| || ||||||||||| |||||| |||||| Sbjct: 264 agatctgcatgcctcc-cctgaggcggagaacaaggtggagggtgctctccttctggatg 206 Query: 368 ttg 370 ||| Sbjct: 205 ttg 203 Score = 141 bits (71), Expect = 2e-30 Identities = 142/168 (84%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||| ||||||| ||| | || ||||| || | |||||||||||||||||| ||||| Sbjct: 671 cttctgaatgttgtagtcggcaagcgtgcgcccgtcctcgagctgcttgccggcaaaaat 612 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| ||||||||||||||||||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 611 gagccgctgctggtccggagggatgccctccttgtcctggatcttggccttgacattgtc 552 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcag 295 ||||| |||| |||| |||| || ||||| |||||||| ||||| Sbjct: 551 aatggtatcagaagactcgacctcaagggtgatagtcttgccagtcag 504 Score = 139 bits (70), Expect = 7e-30 Identities = 152/182 (83%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| || |||||||||||||| ||| | || || ||||||| ||| Sbjct: 919 accaggtggagggtgctctccttctggatgttgtagtcggcgagggtacggccatcctcc 860 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || ||||||||||||||||| || ||||||| ||||| |||| Sbjct: 859 agctgcttgccagcaaagatcaggcgctgctggtccggtggaatgccctccttgtcctgg 800 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| |||||||||||| | ||||||| ||||| || ||||| |||||| Sbjct: 799 atcttggccttgacattgtcgatggtgtccgaggactccacctcaagggtgatcgtcttg 740 Query: 288 cc 289 || Sbjct: 739 cc 738 Score = 139 bits (70), Expect = 7e-30 Identities = 123/143 (86%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | || ||||| || | ||||||||||||||| ||||| || Sbjct: 215 cttctggatgttgtagtcggcaagtgtgcgcccgtcctcgagctgcttgccagcgaagat 156 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| |||||||||||||| || ||||| | ||||| ||||||||| |||||||||||||| Sbjct: 155 gagccgctgctggtccgggggaatgccttccttgtcctggatcttggccttgacgttgtc 96 Query: 248 gatggtgncagaggactncacct 270 |||||| ||||||||| ||||| Sbjct: 95 aatggtgtcagaggactccacct 73 Score = 48.1 bits (24), Expect = 0.020 Identities = 37/42 (88%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 |||||||||||||||||||| || |||||| ||||||||| Sbjct: 1156 aggcggagcaccaggtggagagtgctctccttctggatgttg 1115
>gb|L31941.1|RICRMA630 Oryza sativa (clone rma630) ribosomal protein-linked ubiquitin mRNA, complete cds Length = 634 Score = 167 bits (84), Expect = 3e-38 Identities = 162/188 (86%), Gaps = 2/188 (1%) Strand = Plus / Minus Query: 112 ggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagct 171 |||| ||||| |||| |||||||||||||| ||| | || |||||||||| |||||||| Sbjct: 214 ggtggagggtggactccttctggatgttgtagtcggcgagggtgcggccatcctcgagct 155 Query: 172 gcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatct 231 ||||||||||||| |||| ||||||||||||||| ||||| || | ||||| |||||||| Sbjct: 154 gcttgccggcgaagatgaagcgctgctggtccggggggatcccttccttgtcctggatct 95 Query: 232 tcgccttgacgttgtcgatggtg-ncagaggactncaccttcagtgtgatggtcttgccc 290 | ||||| ||||||||||||||| | || |||| ||||| ||| ||||||||||| ||| Sbjct: 94 tggccttcacgttgtcgatggtgtgccga-gactccacctccagcgtgatggtcttcccc 36 Query: 291 gtcagggt 298 |||||||| Sbjct: 35 gtcagggt 28 Score = 56.0 bits (28), Expect = 8e-05 Identities = 38/42 (90%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||| |||||||||| |||||||| ||||||||| Sbjct: 227 aggcggagcacgtggtggagggtggactccttctggatgttg 186
>gb|BT016596.1| Zea mays clone Contig429 mRNA sequence Length = 980 Score = 165 bits (83), Expect = 1e-37 Identities = 218/265 (82%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| || |||||||||||||| ||| | || ||||| || | || Sbjct: 505 gcaccaggtggagggtgctctccttctggatgttgtagtcggcaagcgtgcgcccgtcct 446 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | |||||||| || || || ||||| ||||||||||| ||||||||||||| ||||| || Sbjct: 445 caagctgcttcccagcaaagatgagccgctgctggtctggagggatgccctccttgtcct 386 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||||||||| |||||| ||||||||| ||||| || ||||| |||| Sbjct: 385 ggatcttggccttgacgttgtcaatggtgtcagaggactccacctcgagggtgatagtct 326 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| ||||||||| || || || |||| ||| || || | ||||||||||| ||||| Sbjct: 325 tgccggtcagggtt-ttcacaaagatctgcatgcctcc-cctgaggcggagcacaaggtg 268 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||| ||||||||| Sbjct: 267 gagggtgctctccttctggatgttg 243 Score = 151 bits (76), Expect = 2e-33 Identities = 197/239 (82%), Gaps = 2/239 (0%) Strand = Plus / Minus Query: 132 tggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaatgagg 191 |||||||||| ||||| | |||||||||| ||| ||||| ||||||||||| || || Sbjct: 707 tggatgttgtagtctgctaaggtgcggccatcctccagctgtttgccggcgaagatcaga 648 Query: 192 cgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtcgatg 251 |||||||||||||| |||||||||| ||||| ||||||||||||||| || ||||||||| Sbjct: 647 cgctgctggtccggggggatgccctccttgtcctggatcttcgccttcacattgtcgatg 588 Query: 252 gtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacnaanat 311 ||| | ||| || |||| ||| || ||||| || || ||||||| |||| || || || Sbjct: 587 gtgtccgagctctcaacctccagggttatggtttttccagtcaggg-tcttcacaaagat 529 Query: 312 ctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatgttg 370 || |||||||| | ||||||||||||||||||||||| |||||| ||||||||| Sbjct: 528 ctggataccacc-cctgaggcggagcaccaggtggagggtgctctccttctggatgttg 471 Score = 133 bits (67), Expect = 4e-28 Identities = 144/172 (83%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | || ||||| || | ||| ||||| ||||| ||||| || Sbjct: 255 cttctggatgttgtagtcagcaagcgtgcgcccgtcctcaagctgtttgccagcgaagat 196 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| ||||||||||| || |||||||||| ||||| ||||||||| ||||| |||||||| Sbjct: 195 gagccgctgctggtctggggggatgccctccttgtcctggatcttggccttaacgttgtc 136 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggtt 299 |||||| |||| |||| ||||| || ||||| |||||||| ||||||||| Sbjct: 135 aatggtgtcagacgactccacctcgagggtgatagtcttgccggtcagggtt 84 Score = 42.1 bits (21), Expect = 1.2 Identities = 34/39 (87%) Strand = Plus / Minus Query: 332 cggagcaccaggtggagggtngactccttntggatgttg 370 |||||||| ||||||||||| |||||| ||||||||| Sbjct: 737 cggagcacaaggtggagggtgctctccttttggatgttg 699
>gb|BT016557.1| Zea mays clone Contig390 mRNA sequence Length = 981 Score = 161 bits (81), Expect = 2e-36 Identities = 157/185 (84%) Strand = Plus / Minus Query: 114 tgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgc 173 |||||||| |||| |||||||||||||| ||| | || |||||||| | ||| |||||| Sbjct: 242 tgaagggttgactccttctggatgttgtagtcagcaagtgtgcggccgtcctcaagctgc 183 Query: 174 ttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttc 233 ||||||||||| || || ||||||||||| ||||||||||||| ||||| ||||||||| Sbjct: 182 ttgccggcgaagataagccgctgctggtcaggagggatgccctccttgtcctggatctta 123 Query: 234 gccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtc 293 |||||||| ||||| |||||| |||| |||| ||||| || ||||| |||||||| || Sbjct: 122 gccttgacattgtcaatggtgtcagaagactccacctcgagggtgatagtcttgccggtg 63 Query: 294 agggt 298 ||||| Sbjct: 62 agggt 58 Score = 157 bits (79), Expect = 3e-35 Identities = 217/265 (81%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||| ||| ||||| |||| |||||||||||||| ||| | || ||||| || | || Sbjct: 478 gcaccaagtggagggttgactccttctggatgttgtagtcagcaagtgtgcgtccgtcct 419 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| || || ||||||||||| ||||||||||||| ||||| || Sbjct: 418 caagctgcttgccggcgaagataagccgctgctggtcaggagggatgccctccttgtcct 359 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| || || |||||| | || |||| ||||| || ||||| |||| Sbjct: 358 ggatcttagccttgacattatcaatggtgtctgaagactccacctcaagggtgattgtct 299 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| |||| || ||||||| || |||| ||| || || | |||||| ||||||| || Sbjct: 298 tgccagtcaagg-tcttgacaaagatctgcatgcctcc-cctaaggcgcagcaccaaatg 241 Query: 346 gagggtngactccttntggatgttg 370 ||||| |||||||| ||||||||| Sbjct: 240 aagggttgactccttctggatgttg 216 Score = 143 bits (72), Expect = 5e-31 Identities = 199/243 (81%), Gaps = 2/243 (0%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | || || | |||| ||| | |||||||||||| || || Sbjct: 684 cttctggatgttgtagtcagcaagggtcctcccatcctccaactgcttgccggcaaagat 625 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| || |||||||| || |||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 624 gagacgttgctggtcaggtgggatgccctccttgtcctggatctttgccttgacattgtc 565 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacna 307 |||||| | ||||||| ||||| || ||||| |||||||| |||| || ||||||| | Sbjct: 564 aatggtgtctgaggactccacctcaagggtgattgtcttgccagtcaagg-tcttgacaa 506 Query: 308 anatctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatg 367 | |||| ||| || || | |||||| ||||||| ||||||||| |||||||| |||||| Sbjct: 505 agatctgcatgcctcc-cctaaggcgcagcaccaagtggagggttgactccttctggatg 447 Query: 368 ttg 370 ||| Sbjct: 446 ttg 444
>emb|X15427.1|CRUBIRP Chlamydomonas reinhardtii UBI1-ribosomal protein fusion mRNA Length = 689 Score = 161 bits (81), Expect = 2e-36 Identities = 163/193 (84%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| |||||||||||||| ||| | || |||||||| | || Sbjct: 219 gcaccaggtggagggtggactccttctggatgttgtagtccgccagggtgcggccgtcct 160 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| || || ||||||||||||||||||||||||| ||||| || Sbjct: 159 ccagctgcttgccggcgaagatcagacgctgctggtccggagggatgccctccttgtcct 100 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 | ||||| ||||| || || ||||||||| | || |||| ||||| || |||||||||| Sbjct: 99 gaatcttggccttcacattctcgatggtgtccgaagactccacctcgagggtgatggtct 40 Query: 286 tgcccgtcagggt 298 | ||||| ||||| Sbjct: 39 tacccgtgagggt 27 Score = 60.0 bits (30), Expect = 5e-06 Identities = 34/36 (94%) Strand = Plus / Minus Query: 335 agcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||||||| |||||||| ||||||||| Sbjct: 220 agcaccaggtggagggtggactccttctggatgttg 185
>emb|AJ000659.1|PB659UB Phreatamoeba balamuthi UBI5 sequence, putative polyubiquitin gene Length = 187 Score = 161 bits (81), Expect = 2e-36 Identities = 148/173 (85%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||||| ||| | || |||||||| | ||||||||||||||| ||| Sbjct: 174 gactccttctggatgttgtagtcggccagcgtgcggccgtcctcgagctgcttgcccgcg 115 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || |||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||| Sbjct: 114 aagatgaggcgctgctggtccggggggatgccctccttgtcctggatcttctgcttgacg 55 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcag 295 |||||||| | | | |||| || |||| ||| ||||| |||||||||||||| Sbjct: 54 ttgtcgatcgagtccgagggctcgacctccagagtgatcgtcttgcccgtcag 2
>gb|DQ393578.1| Metarhizium anisopliae polyubiquitin mRNA, complete cds Length = 1194 Score = 161 bits (81), Expect = 2e-36 Identities = 183/218 (83%), Gaps = 2/218 (0%) Strand = Plus / Minus Query: 153 gtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatg 212 |||||||||| || ||||| ||||| |||||||| |||||||| ||||| ||||| || Sbjct: 496 gtgcggccatcttcaagctgtttgccagcgaaaatcaggcgctgttggtcgggaggaata 437 Query: 213 ccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncaccttc 272 |||| ||||| ||||||||||| ||||||||||||||||||| | || |||| ||||| Sbjct: 436 ccctccttgtcctggatcttcgacttgacgttgtcgatggtgtcggatgactccacctcg 377 Query: 273 agtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggc 332 || ||||||||||| || || |||| ||||||| || |||| ||||||||||| ||||| Sbjct: 376 agggtgatggtctttccggtgaggg-tcttgacgaagatctgcataccaccac-gaaggc 319 Query: 333 ggagcaccaggtggagggtngactccttntggatgttg 370 |||| || ||||| ||||| || ||||| ||||||||| Sbjct: 318 ggagaacgaggtgaagggtggattccttctggatgttg 281 Score = 115 bits (58), Expect = 1e-22 Identities = 149/182 (81%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||||||||| || | |||||||||||||| || | || || ||||||| ||| ||| Sbjct: 310 aggtgaagggtggattccttctggatgttgtaatccgagagggtacggccatcctcaagc 251 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| |||||||| | |||||| ||||| || ||||| |||| ||||| ||| ||| Sbjct: 250 tgcttgccagcgaaaattaagcgctgttggtcaggcgggataccctccttgtcctgaatc 191 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 |||| ||| || |||||||||||| | || |||| |||| || ||||||||||||||| Sbjct: 190 ttcgacttaacattgtcgatggtgtcggacgactcgacctcaagagtgatggtcttgccc 131 Query: 291 gt 292 || Sbjct: 130 gt 129
>gb|AF323508.1|AF323508 Synthetic construct HPV type 6b humanized ubiquitin/L1 delta/H-2 Db CTL epitope hybrid protein gene, complete cds Length = 1677 Score = 161 bits (81), Expect = 2e-36 Identities = 163/193 (84%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| |||||||||||||| ||| | || |||||||| | || Sbjct: 211 gcaccaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccgtcct 152 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| || || | ||||||||| || |||||||||| ||||| || Sbjct: 151 ccagctgcttgccggcgaagatcagcctctgctggtcgggggggatgccctccttgtcct 92 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| ||||| ||||||||| | |||| || ||||| ||| |||||||||| Sbjct: 91 ggatcttggccttcacgttctcgatggtgtcggagggctccacctccagggtgatggtct 32 Query: 286 tgcccgtcagggt 298 | || |||||||| Sbjct: 31 tcccggtcagggt 19 Score = 52.0 bits (26), Expect = 0.001 Identities = 33/36 (91%) Strand = Plus / Minus Query: 335 agcaccaggtggagggtngactccttntggatgttg 370 ||||||||||| ||||| |||||||| ||||||||| Sbjct: 212 agcaccaggtgcagggtggactccttctggatgttg 177
>dbj|AB210852.1| Lemna gibba LgUBQ mRNA for ubiquitin, partial cds Length = 216 Score = 161 bits (81), Expect = 2e-36 Identities = 163/193 (84%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| || || || | |||||| || |||| ||| | || |||||||||| || Sbjct: 209 gcaccaggtggagagtggattccttctgaatattgtagtcggcgagggtgcggccatcct 150 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| ||||| |||||||||||||| || || |||| ||| | || Sbjct: 149 ccagctgcttgccggcgaagatgagacgctgctggtccgggggaattccctccttatcct 90 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||||||||||||||||||| | || |||| ||||| ||||||||||||| Sbjct: 89 ggatcttggccttgacgttgtcgatggtgtccgaagactccacctcaagtgtgatggtct 30 Query: 286 tgcccgtcagggt 298 |||| |||||||| Sbjct: 29 tgccggtcagggt 17
>gb|AF322415.1|AF322415 Synthetic construct HPV type 6b humanized L1/ubiqutin hybrid protein mRNA, complete cds Length = 1728 Score = 161 bits (81), Expect = 2e-36 Identities = 163/193 (84%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| |||||||||||||| ||| | || |||||||| | || Sbjct: 211 gcaccaggtgcagggtggactccttctggatgttgtagtcggacagggtgcggccgtcct 152 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| || || | ||||||||| || |||||||||| ||||| || Sbjct: 151 ccagctgcttgccggcgaagatcagcctctgctggtcgggggggatgccctccttgtcct 92 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| ||||| ||||||||| | |||| || ||||| ||| |||||||||| Sbjct: 91 ggatcttggccttcacgttctcgatggtgtcggagggctccacctccagggtgatggtct 32 Query: 286 tgcccgtcagggt 298 | || |||||||| Sbjct: 31 tcccggtcagggt 19 Score = 52.0 bits (26), Expect = 0.001 Identities = 33/36 (91%) Strand = Plus / Minus Query: 335 agcaccaggtggagggtngactccttntggatgttg 370 ||||||||||| ||||| |||||||| ||||||||| Sbjct: 212 agcaccaggtgcagggtggactccttctggatgttg 177
>ref|NM_001009202.1| Ovis aries polyubiquitin (LOC443016), mRNA Length = 1102 Score = 161 bits (81), Expect = 2e-36 Identities = 216/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| || | ||||||||||||| || Sbjct: 760 accaggtgcagggtcgactccttctggatgttgtaatcagaaagagtgcggccatcttcc 701 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 700 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 641 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 640 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 581 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || ||||| |||||||| | Sbjct: 580 ccggtcaggg-tcttcacgaagatctgcataccacc-cctcagacggagaaccaggtgca 523 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 522 gggtcgactccttctggatgttg 500 Score = 153 bits (77), Expect = 5e-34 Identities = 215/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| || | ||||||||||||| || Sbjct: 532 accaggtgcagggtcgactccttctggatgttgtaatcagaaagagtgcggccatcttcc 473 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 472 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 413 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 412 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 353 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | | ||||| |||||||| | Sbjct: 352 ccggtcaggg-tcttcacgaagatctgcataccacc-cctcatacggagaaccaggtgca 295 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 294 gggtcgactccttctggatgttg 272 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||| ||||||| || | ||||||||||||| || Sbjct: 988 accaggtgcagggtcgactctttctgaatgttgtaatcagaaagagtgcggccatcttcc 929 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 928 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 869 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 868 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 809 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || ||||| |||||||| | Sbjct: 808 ccggtcaggg-tcttcacaaagatctgcataccacc-cctcagacggagaaccaggtgca 751 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 750 gggtcgactccttctggatgttg 728 Score = 127 bits (64), Expect = 3e-26 Identities = 158/192 (82%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| || | ||||||||||||| || Sbjct: 304 accaggtgcagggtcgactccttctggatgttgtaatcagaaagagtgcggccatcttcc 245 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 244 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 185 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 184 atcttggccttcacattctcgatggtgtcactgggctccacctccagggtgatggtcttg 125 Query: 288 cccgtcagggtt 299 || ||||||||| Sbjct: 124 ccggtcagggtt 113
>gb|AF038129.1|AF038129 Ovis aries polyubiquitin mRNA, complete cds Length = 1102 Score = 161 bits (81), Expect = 2e-36 Identities = 216/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| || | ||||||||||||| || Sbjct: 760 accaggtgcagggtcgactccttctggatgttgtaatcagaaagagtgcggccatcttcc 701 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 700 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 641 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 640 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 581 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || ||||| |||||||| | Sbjct: 580 ccggtcaggg-tcttcacgaagatctgcataccacc-cctcagacggagaaccaggtgca 523 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 522 gggtcgactccttctggatgttg 500 Score = 153 bits (77), Expect = 5e-34 Identities = 215/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| || | ||||||||||||| || Sbjct: 532 accaggtgcagggtcgactccttctggatgttgtaatcagaaagagtgcggccatcttcc 473 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 472 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 413 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 412 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 353 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | | ||||| |||||||| | Sbjct: 352 ccggtcaggg-tcttcacgaagatctgcataccacc-cctcatacggagaaccaggtgca 295 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 294 gggtcgactccttctggatgttg 272 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||| ||||||| || | ||||||||||||| || Sbjct: 988 accaggtgcagggtcgactctttctgaatgttgtaatcagaaagagtgcggccatcttcc 929 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 928 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 869 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 868 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 809 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || ||||| |||||||| | Sbjct: 808 ccggtcaggg-tcttcacaaagatctgcataccacc-cctcagacggagaaccaggtgca 751 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 750 gggtcgactccttctggatgttg 728 Score = 127 bits (64), Expect = 3e-26 Identities = 158/192 (82%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| || | ||||||||||||| || Sbjct: 304 accaggtgcagggtcgactccttctggatgttgtaatcagaaagagtgcggccatcttcc 245 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 244 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 185 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 184 atcttggccttcacattctcgatggtgtcactgggctccacctccagggtgatggtcttg 125 Query: 288 cccgtcagggtt 299 || ||||||||| Sbjct: 124 ccggtcagggtt 113
>emb|X60390.1|CGPOLYUGE C.griseus gene for polyubiquitin Length = 1603 Score = 161 bits (81), Expect = 2e-36 Identities = 216/263 (82%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 841 accaggtgcagggtggactctttctggatgttgtaatcagaaagagtgcggccatcttcc 782 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| ||||||||||| || |||||||||| ||| | |||| Sbjct: 781 agctgcttgccggcaaagatgagtcgctgctggtcgggggggatgccctccttatcctgg 722 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || ||||| || |||||||||||| Sbjct: 721 atcttggccttgacattctcgatggtgtcactgggctccacctctagggtgatggtcttg 662 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 661 ccggtcaggg-tcttcacgaagatctgcatgccacc-cctgaggcggaggaccaggtgca 604 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 603 gggtggactctttctggatgttg 581 Score = 153 bits (77), Expect = 5e-34 Identities = 215/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 1069 accaggtgcagggtggactctttctggatgttgtaatcagaaagagtgcggccatcttcc 1010 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| ||||||||||| || |||||||||| ||| | |||| Sbjct: 1009 agctgcttgccggcaaagatgagtcgctgctggtcgggggggatgccctccttatcctgg 950 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || | ||||| || |||||||||||| Sbjct: 949 atcttggccttgacattctcgatggtgtcactgggttccacctctagggtgatggtcttg 890 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 889 ccggtcaggg-tcttcacgaaaatctgcatgccacc-cctgaggcggaggaccaggtgca 832 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 831 gggtggactctttctggatgttg 809 Score = 153 bits (77), Expect = 5e-34 Identities = 215/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 613 accaggtgcagggtggactctttctggatgttgtaatcagaaagagtgcggccatcttcc 554 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| ||||||||||| || |||||||||| ||| | |||| Sbjct: 553 agctgcttgccggcaaagatgagtcgctgctggtcgggggggatgccctccttatcctgg 494 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || | ||||| || |||||||||||| Sbjct: 493 atcttggccttgacattctcgatggtgtcactgggttccacctctagggtgatggtcttg 434 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 433 ccggtcaggg-tcttcacgaaaatctgcatgccacc-cctgaggcggaggaccaggtgca 376 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 375 gggtggactctttctggatgttg 353 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 1297 accaggtgcagggtggactctttctggatgttgtaatcagaaagagtgcggccatcttcc 1238 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| ||||||||||| || |||||||||| || | |||| Sbjct: 1237 agctgcttgccggcaaagatgagtcgctgctggtcgggggggatgccctctttatcctgg 1178 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 1177 atcttggccttcacattctcgatggtgtcactgggctccacctctagggtgatggtcttg 1118 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 1117 ccagtcaggg-tcttcacgaagatctgcatgccacc-cctgaggcggaggaccaggtgca 1060 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 1059 gggtggactctttctggatgttg 1037 Score = 133 bits (67), Expect = 4e-28 Identities = 158/191 (82%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 385 accaggtgcagggtggactctttctggatgttgtaatcagaaagagtgcggccatcttcc 326 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| ||||||||||| || |||||||||| || | |||| Sbjct: 325 agctgcttgccggcaaagatgagtcgctgctggtcgggggggatgccctctttatcctgg 266 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || ||||| || |||||||||||| Sbjct: 265 atcttggccttgacattttcgatggtgtcactgggctccacctctagggtgatggtcttg 206 Query: 288 cccgtcagggt 298 || |||||||| Sbjct: 205 ccggtcagggt 195
>gb|BT016494.1| Zea mays clone Contig327 mRNA sequence Length = 974 Score = 159 bits (80), Expect = 8e-36 Identities = 201/243 (82%), Gaps = 2/243 (0%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | || ||||| || | ||| |||||||| || || || || Sbjct: 484 cttctggatgttgtagtcggcaagcgtgcgcccgtcctcaagctgcttcccagcaaagat 425 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| ||||||||||| ||||||||||||| ||||| ||||||||| |||||||||||||| Sbjct: 424 gagccgctgctggtctggagggatgccctccttgtcctggatcttggccttgacgttgtc 365 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacna 307 |||||| ||||||||| ||||| || ||||| |||||||| ||||||||| || || | Sbjct: 364 aatggtgtcagaggactccacctcgagggtgatagtcttgccggtcagggtt-ttcacaa 306 Query: 308 anatctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatg 367 | |||| ||| || || | ||||||||||| ||||||||||| |||||| |||||| Sbjct: 305 agatctgcatgcctcc-cctgaggcggagcacaaggtggagggtgctctccttctggatg 247 Query: 368 ttg 370 ||| Sbjct: 246 ttg 244 Score = 119 bits (60), Expect = 7e-24 Identities = 144/173 (83%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | || ||||| || | ||| ||||| ||||| ||||| || Sbjct: 256 cttctggatgttgtagtcagcaagcgtgcgcccgtcctcaagctgtttgccagcgaagat 197 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| ||||||||||| || |||||||||| ||||| ||||||||| ||||| |||||||| Sbjct: 196 gagccgctgctggtctggggggatgccctccttgtcctggatcttggccttaacgttgtc 137 Query: 248 gatggtgncagaggactncaccttca-gtgtgatggtcttgcccgtcagggtt 299 |||||| |||| |||| ||||| | | ||||| |||||||| ||||||||| Sbjct: 136 aatggtgtcagacgactccacctcgaggagtgatagtcttgccggtcagggtt 84 Score = 117 bits (59), Expect = 3e-23 Identities = 212/265 (80%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| || ||| |||||||||| ||| | || ||||| || | || Sbjct: 734 gcaccaggtggagggtgctctccttttggatgttgtagtcggccagcgtgcgcccgtcct 675 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | |||||||| || || || ||||| ||||||||||| || || ||||||| ||||| || Sbjct: 674 caagctgctttccagcaaagatgagccgctgctggtctgggggaatgccctccttgtcct 615 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||||||||||||||||||| | || |||| ||||| || ||||| || | Sbjct: 614 ggatcttggccttgacgttgtcgatggtgtctgaagactccacctcgagggtgatagttt 555 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| ||||||| |||| || || |||| ||| || || | ||||| ||||||| ||| Sbjct: 554 tgccggtcaggg-tcttcacgaagatctgcatgcctcc-cctgaggcgcagcaccaagtg 497 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||| ||||||||| Sbjct: 496 gagggtgctctccttctggatgttg 472 Score = 50.1 bits (25), Expect = 0.005 Identities = 35/39 (89%) Strand = Plus / Minus Query: 332 cggagcaccaggtggagggtngactccttntggatgttg 370 |||||||||||||||||||| |||||| ||||||||| Sbjct: 738 cggagcaccaggtggagggtgctctccttttggatgttg 700
>gb|BT018032.1| Zea mays clone EL01N0530D02.c mRNA sequence Length = 1238 Score = 159 bits (80), Expect = 8e-36 Identities = 201/243 (82%), Gaps = 2/243 (0%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | || ||||| || | ||| |||||||| || || || || Sbjct: 488 cttctggatgttgtagtcggcaagcgtgcgcccgtcctcaagctgcttcccagcaaagat 429 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| ||||||||||| ||||||||||||| ||||| ||||||||| |||||||||||||| Sbjct: 428 gagccgctgctggtctggagggatgccctccttgtcctggatcttggccttgacgttgtc 369 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacna 307 |||||| ||||||||| ||||| || ||||| |||||||| ||||||||| || || | Sbjct: 368 aatggtgtcagaggactccacctcgagggtgatagtcttgccggtcagggtt-ttcacaa 310 Query: 308 anatctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatg 367 | |||| ||| || || | ||||||||||| ||||||||||| |||||| |||||| Sbjct: 309 agatctgcatgcctcc-cctgaggcggagcacaaggtggagggtgctctccttctggatg 251 Query: 368 ttg 370 ||| Sbjct: 250 ttg 248 Score = 133 bits (67), Expect = 4e-28 Identities = 144/172 (83%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | || ||||| || | ||| ||||| ||||| ||||| || Sbjct: 260 cttctggatgttgtagtcagcaagcgtgcgcccgtcctcaagctgtttgccagcgaagat 201 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| ||||||||||| || |||||||||| ||||| ||||||||| ||||| |||||||| Sbjct: 200 gagccgctgctggtctggggggatgccctccttgtcctggatcttggccttaacgttgtc 141 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggtt 299 |||||| |||| |||| ||||| || ||||| |||||||| ||||||||| Sbjct: 140 aatggtgtcagacgactccacctggagggtgatagtcttgccggtcagggtt 89 Score = 131 bits (66), Expect = 2e-27 Identities = 210/260 (80%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 |||||||||||| || |||||||||||||| ||| | || ||||| || | ||| ||| Sbjct: 733 aggtgaagggtactctccttctggatgttgtagtcggccagcgtgcgcccgtcctcaagc 674 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||| || || || ||||| ||||||||||| || || ||||||| ||||| ||||||| Sbjct: 673 tgctttccagcaaagatgagccgctgctggtctgggggaatgccctccttgtcctggatc 614 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||||||||||||||||||| | || |||| ||||| || ||||| || ||||| Sbjct: 613 ttggccttgacgttgtcgatggtgtctgaagactccacctcgagggtgatagttttgccg 554 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 ||||||| |||| || || |||| ||| || || | ||||| ||||||| |||||||| Sbjct: 553 gtcaggg-tcttcacgaagatctgcatgcctcc-cctgaggcgcagcaccaagtggaggg 496 Query: 351 tngactccttntggatgttg 370 | |||||| ||||||||| Sbjct: 495 tgctctccttctggatgttg 476 Score = 119 bits (60), Expect = 7e-24 Identities = 106/123 (86%) Strand = Plus / Minus Query: 132 tggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaatgagg 191 |||||||||| ||||| | | |||||||| ||| ||||| ||||||||||| || || Sbjct: 940 tggatgttgtagtctgctaaggggcggccatcctccagctgtttgccggcgaagatcaga 881 Query: 192 cgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtcgatg 251 |||||||||||||| |||||||||| ||||| ||||||||||||||| || ||||||||| Sbjct: 880 cgctgctggtccggggggatgccctccttgtcctggatcttcgccttcacattgtcgatg 821 Query: 252 gtg 254 ||| Sbjct: 820 gtg 818
>gb|BT017660.1| Zea mays clone EL01N0440E11.c mRNA sequence Length = 997 Score = 159 bits (80), Expect = 8e-36 Identities = 201/243 (82%), Gaps = 2/243 (0%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | || ||||| || | ||| |||||||| || || || || Sbjct: 492 cttctggatgttgtagtcggcaagcgtgcgcccgtcctcaagctgcttcccagcaaagat 433 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| ||||||||||| ||||||||||||| ||||| ||||||||| |||||||||||||| Sbjct: 432 gagccgctgctggtctggagggatgccctccttgtcctggatcttggccttgacgttgtc 373 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacna 307 |||||| ||||||||| ||||| || ||||| |||||||| ||||||||| || || | Sbjct: 372 aatggtgtcagaggactccacctcgagggtgatagtcttgccggtcagggtt-ttcacaa 314 Query: 308 anatctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatg 367 | |||| ||| || || | ||||||||||| ||||||||||| |||||| |||||| Sbjct: 313 agatctgcatgcctcc-cctgaggcggagcacaaggtggagggtgctctccttctggatg 255 Query: 368 ttg 370 ||| Sbjct: 254 ttg 252 Score = 119 bits (60), Expect = 7e-24 Identities = 193/239 (80%), Gaps = 2/239 (0%) Strand = Plus / Minus Query: 132 tggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaatgagg 191 |||||||||| ||||| | | |||||||| ||| ||||| ||||||||||| || || Sbjct: 716 tggatgttgtagtctgctaaggggcggccatcctccagctgtttgccggcgaagatcaga 657 Query: 192 cgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtcgatg 251 ||||||||||| || || ||||||| ||||| ||||||||| |||||||||||||||||| Sbjct: 656 cgctgctggtctgggggaatgccctccttgtcctggatcttggccttgacgttgtcgatg 597 Query: 252 gtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacnaanat 311 ||| | || |||| | ||| || ||||| || ||||| ||||||| |||| || || || Sbjct: 596 gtgtctgaagactccccctcgagggtgatagttttgccggtcaggg-tcttcacgaagat 538 Query: 312 ctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatgttg 370 || ||| || || | ||||| ||||||| ||||||||| |||||| ||||||||| Sbjct: 537 ctgcatgcctcc-cctgaggcgcagcaccaagtggagggtgctctccttctggatgttg 480 Score = 103 bits (52), Expect = 4e-19 Identities = 142/173 (82%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | || ||||| || | ||| ||||| ||||| ||||| || Sbjct: 264 cttctggatgttgtagtcagcaagcgtgcgcccgtcctcaagctgtttgccagcgaagat 205 Query: 188 gaggcgctgctggtccggagggatgccct-ncttgtnctggatcttcgccttgacgttgt 246 ||| ||||||||||| || |||||||||| | || ||||||||| ||||| ||||||| Sbjct: 204 gagccgctgctggtctggggggatgccctcccccgtcctggatcttggccttaacgttgt 145 Query: 247 cgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggtt 299 | |||||| |||| |||| ||||| || ||||| |||||||| ||||||||| Sbjct: 144 caatggtgtcagacgactccacctcgagggtgatagtcttgccggtcagggtt 92
>gb|S94464.1| polyubiquitin [maize, Genomic, 3841 nt] Length = 3841 Score = 159 bits (80), Expect = 8e-36 Identities = 201/243 (82%), Gaps = 2/243 (0%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| || | || |||||||||| ||| ||||||||||||||||| || Sbjct: 3094 cttctggatgttgtaatccgccagggtgcggccatcctccagctgcttgccggcgaagat 3035 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||||||||||||||| || |||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 3034 gaggcgctgctggtcgggtgggatgccctccttgtcctggatcttggccttgacattgtc 2975 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacna 307 ||||| | || |||| ||||| || ||||| |||||||| || || | |||| || | Sbjct: 2974 aatggtatccgaagactccacctcaagggtgattgtcttgccagtgagtg-tcttcacaa 2916 Query: 308 anatctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatg 367 | |||| ||||||||| | || |||||||||||||||||||| |||||| |||||| Sbjct: 2915 agatctgcataccacc-cctgagacggagcaccaggtggagggtgctctccttctggatg 2857 Query: 368 ttg 370 ||| Sbjct: 2856 ttg 2854 Score = 151 bits (76), Expect = 2e-33 Identities = 200/243 (82%), Gaps = 2/243 (0%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | || ||||| || | ||| |||||||| || || || || Sbjct: 2410 cttctggatgttgtagtcggcaagcgtgcgcccgtcctcaagctgcttcccagcaaagat 2351 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| ||||||||||| ||||||||||||| ||||| ||||||||| |||||||||||||| Sbjct: 2350 gagccgctgctggtctggagggatgccctccttgtcctggatcttggccttgacgttgtc 2291 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacna 307 |||||| ||||||||| ||||| || ||||| |||||||| ||||||||| || || | Sbjct: 2290 aatggtgtcagaggactccacctcgagggtgatagtcttgccggtcagggtt-ttcacaa 2232 Query: 308 anatctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatg 367 | |||| ||| || || | || |||||||| ||||||||||| |||||| |||||| Sbjct: 2231 agatctgcatgcctcc-cctgagacggagcacaaggtggagggtgctctccttctggatg 2173 Query: 368 ttg 370 ||| Sbjct: 2172 ttg 2170 Score = 149 bits (75), Expect = 7e-33 Identities = 216/265 (81%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| || |||||||||||||| || | || |||||||||| || Sbjct: 2888 gcaccaggtggagggtgctctccttctggatgttgtaatccgcaagggtgcggccatcct 2829 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| ||||| || | |||||||||||||| |||||||||| ||||| || Sbjct: 2828 ccagctgcttgccagcgaagatcaaacgctgctggtccggtgggatgccctccttgtcct 2769 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| |||||||||||| | || |||| ||||| || ||||| |||| Sbjct: 2768 ggatcttggccttgacattgtcgatggtgtctgaagactccacctcgagggtgatagtct 2709 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| ||||||| |||| || || |||| ||| || || | ||||| ||||||| ||| Sbjct: 2708 tgccggtcaggg-tcttcacgaagatctgcatgcctcc-cctgaggcgcagcaccaagtg 2651 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||| ||||||||| Sbjct: 2650 gagggtgctctccttctggatgttg 2626 Score = 143 bits (72), Expect = 5e-31 Identities = 196/239 (82%), Gaps = 2/239 (0%) Strand = Plus / Minus Query: 132 tggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaatgagg 191 |||||||||| ||||| || |||||||||| ||| ||||| ||||||||||| || || Sbjct: 3546 tggatgttgtagtctgctagggtgcggccatcctccagctgtttgccggcgaagatcaga 3487 Query: 192 cgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtcgatg 251 |||||||||||||| |||||||||| ||||| ||||||||||||||| || ||||||||| Sbjct: 3486 cgctgctggtccggggggatgccctccttgtcctggatcttcgccttcacattgtcgatg 3427 Query: 252 gtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacnaanat 311 ||| | ||| || |||| ||| || ||||| || || ||||||| |||| || || || Sbjct: 3426 gtgtccgagctctcaacctccagggttatggtttttccagtcaggg-tctttacaaagat 3368 Query: 312 ctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatgttg 370 || ||||||||| | |||||||| || ||||| ||||| |||||| ||||||||| Sbjct: 3367 ctgcataccacctc-tgaggcggagaacaaggtgaagggtgctctccttctggatgttg 3310 Score = 139 bits (70), Expect = 7e-30 Identities = 211/260 (81%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||||||||| || |||||||||||||| ||| | ||||||||||||| ||| ||| Sbjct: 3339 aggtgaagggtgctctccttctggatgttgtagtccgcgagagtgcggccatcctccagc 3280 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| || || || || ||||||||||| || || ||||||| ||||| ||||||| Sbjct: 3279 tgcttgcccgcaaagatcagacgctgctggtctgggggaatgccctccttgtcctggatc 3220 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| || ||||| |||||| ||||| || ||||| || |||||||||||||| Sbjct: 3219 ttggccttcacattgtcaatggtgtcagagctctccacctccaaggtgatggtcttgcca 3160 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 |||| | |||| || || |||| ||| ||||| | |||||||||||||||||||| | Sbjct: 3159 gtcaatg-tcttcacaaaaatctgcatgccacc-cctgaggcggagcaccaggtggagag 3102 Query: 351 tngactccttntggatgttg 370 | |||||| ||||||||| Sbjct: 3101 tgctctccttctggatgttg 3082 Score = 127 bits (64), Expect = 3e-26 Identities = 197/243 (81%), Gaps = 2/243 (0%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | || ||||| || | ||| |||||||| || || || || Sbjct: 2638 cttctggatgttgtagtcggcaagcgtgcgcccgtcctcaagctgctttccagcaaagat 2579 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| ||||||||||| || || ||||||| ||||| ||||||||| |||||||||||||| Sbjct: 2578 gagccgctgctggtctgggggaatgccctccttgtcctggatcttggccttgacgttgtc 2519 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacna 307 ||||||| | || |||| ||||| || ||||| |||||||| ||||||| |||| || | Sbjct: 2518 gatggtgtctgaagactccacctcgagggtgatagtcttgccggtcaggg-tcttcacga 2460 Query: 308 anatctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatg 367 | |||| ||| || || | ||||| ||||||| ||||||||| |||||| |||||| Sbjct: 2459 agatctgcatgcctcc-cctgaggcgcagcaccaagtggagggtgctctccttctggatg 2401 Query: 368 ttg 370 ||| Sbjct: 2400 ttg 2398 Score = 125 bits (63), Expect = 1e-25 Identities = 143/172 (83%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | || ||||| || | ||| ||||| ||||| || || || Sbjct: 2182 cttctggatgttgtagtcagcaagcgtgcgcccgtcctcaagctgtttgccagcaaagat 2123 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| ||||||||||| || |||||||||| ||||| ||||||||| ||||| |||||||| Sbjct: 2122 gagccgctgctggtctggggggatgccctccttgtcctggatcttggccttaacgttgtc 2063 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggtt 299 |||||| |||| |||| ||||| || ||||| |||||||| ||||||||| Sbjct: 2062 aatggtgtcagacgactccacctcgagggtgatagtcttgccagtcagggtt 2011 Score = 42.1 bits (21), Expect = 1.2 Identities = 34/39 (87%) Strand = Plus / Minus Query: 332 cggagcaccaggtggagggtngactccttntggatgttg 370 |||||||| ||||||||||| |||||| ||||||||| Sbjct: 3576 cggagcacaaggtggagggtgctctccttttggatgttg 3538
>gb|U29159.1|ZMU29159 Zea mays clone MubG1 ubiquitin gene, complete cds Length = 4190 Score = 159 bits (80), Expect = 8e-36 Identities = 201/243 (82%), Gaps = 2/243 (0%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| || | || |||||||||| ||| ||||||||||||||||| || Sbjct: 3443 cttctggatgttgtaatccgccagggtgcggccatcctccagctgcttgccggcgaagat 3384 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||||||||||||||| || |||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 3383 gaggcgctgctggtcgggtgggatgccctccttgtcctggatcttggccttgacattgtc 3324 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacna 307 ||||| | || |||| ||||| || ||||| |||||||| || || | |||| || | Sbjct: 3323 aatggtatccgaagactccacctcaagggtgattgtcttgccagtgagtg-tcttcacaa 3265 Query: 308 anatctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatg 367 | |||| ||||||||| | || |||||||||||||||||||| |||||| |||||| Sbjct: 3264 agatctgcataccacc-cctgagacggagcaccaggtggagggtgctctccttctggatg 3206 Query: 368 ttg 370 ||| Sbjct: 3205 ttg 3203 Score = 149 bits (75), Expect = 7e-33 Identities = 216/265 (81%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| || |||||||||||||| || | || |||||||||| || Sbjct: 3237 gcaccaggtggagggtgctctccttctggatgttgtaatccgcaagggtgcggccatcct 3178 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| ||||| || | |||||||||||||| |||||||||| ||||| || Sbjct: 3177 ccagctgcttgccagcgaagatcaaacgctgctggtccggtgggatgccctccttgtcct 3118 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| |||||||||||| | || |||| ||||| || ||||| |||| Sbjct: 3117 ggatcttggccttgacattgtcgatggtgtctgaagactccacctcgagggtgatagtct 3058 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| ||||||||| || || || |||| ||| || || | || |||||||| ||||| Sbjct: 3057 tgccggtcagggtt-ttcacaaagatctgcatgcctcc-cctgagacggagcacaaggtg 3000 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||| ||||||||| Sbjct: 2999 gagggtgctctccttctggatgttg 2975 Score = 143 bits (72), Expect = 5e-31 Identities = 196/239 (82%), Gaps = 2/239 (0%) Strand = Plus / Minus Query: 132 tggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaatgagg 191 |||||||||| ||||| || |||||||||| ||| ||||| ||||||||||| || || Sbjct: 3895 tggatgttgtagtctgctagggtgcggccatcctccagctgtttgccggcgaagatcaga 3836 Query: 192 cgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtcgatg 251 |||||||||||||| |||||||||| ||||| ||||||||||||||| || ||||||||| Sbjct: 3835 cgctgctggtccggggggatgccctccttgtcctggatcttcgccttcacattgtcgatg 3776 Query: 252 gtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacnaanat 311 ||| | ||| || |||| ||| || ||||| || || ||||||| |||| || || || Sbjct: 3775 gtgtccgagctctcaacctccagggttatggtttttccagtcaggg-tctttacaaagat 3717 Query: 312 ctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatgttg 370 || ||||||||| | |||||||| || ||||| ||||| |||||| ||||||||| Sbjct: 3716 ctgcataccacctc-tgaggcggagaacaaggtgaagggtgctctccttctggatgttg 3659 Score = 127 bits (64), Expect = 3e-26 Identities = 152/184 (82%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||||||||| || |||||||||||||| ||| | ||||||||||||| ||| ||| Sbjct: 3688 aggtgaagggtgctctccttctggatgttgtagtccgcgagagtgcggccatcctccagc 3629 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| || || || || ||||||||||| || || ||||||| ||||| ||||||| Sbjct: 3628 tgcttgcccgcaaagatcagacgctgctggtctgggggaatgccctccttgtcctggatc 3569 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| || ||||| |||||| ||||| || ||||| || |||||||||||||| Sbjct: 3568 ttggccttcacattgtcaatggtgtcagagctctccacctccaaggtgatggtcttgcca 3509 Query: 291 gtca 294 |||| Sbjct: 3508 gtca 3505 Score = 127 bits (64), Expect = 3e-26 Identities = 197/243 (81%), Gaps = 2/243 (0%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | || ||||| || | ||| ||||| ||||| || || || Sbjct: 2987 cttctggatgttgtagtcagcaagcgtgcgcccgtcctcaagctgtttgccagcaaagat 2928 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| ||||||||||| || |||||||||| ||||| ||||||||| ||||| |||||||| Sbjct: 2927 gagccgctgctggtctggggggatgccctccttgtcctggatcttggccttaacgttgtc 2868 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacna 307 |||||| |||| |||| ||||| || ||||| |||||||| ||||||| |||| || | Sbjct: 2867 aatggtgtcagacgactccacctcgagggtgatagtcttgccggtcaggg-tcttcacga 2809 Query: 308 anatctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatg 367 | |||| ||| || || | ||||| ||||||| ||||||||| |||||| |||||| Sbjct: 2808 agatctgcatgcctcc-cctgaggcgcagcaccaagtggagggtgctctccttctggatg 2750 Query: 368 ttg 370 ||| Sbjct: 2749 ttg 2747 Score = 125 bits (63), Expect = 1e-25 Identities = 143/172 (83%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | || ||||| || | ||| ||||| ||||| || || || Sbjct: 2531 cttctggatgttgtagtcagcaagcgtgcgcccgtcctcaagctgtttgccagcaaagat 2472 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| ||||||||||| || |||||||||| ||||| ||||||||| ||||| |||||||| Sbjct: 2471 gagccgctgctggtctggggggatgccctccttgtcctggatcttggccttaacgttgtc 2412 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggtt 299 |||||| |||| |||| ||||| || ||||| |||||||| ||||||||| Sbjct: 2411 aatggtgtcagacgactccacctcgagggtgatagtcttgccagtcagggtt 2360 Score = 119 bits (60), Expect = 7e-24 Identities = 196/243 (80%), Gaps = 2/243 (0%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | || ||||| || | ||| |||||||| || || || || Sbjct: 2759 cttctggatgttgtagtcggcaagcgtgcgcccgtcctcaagctgctttccagcaaagat 2700 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| ||||||||||| || || ||||||| ||||| ||||||||| |||||||||||||| Sbjct: 2699 gagccgctgctggtctgggggaatgccctccttgtcctggatcttggccttgacgttgtc 2640 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacna 307 ||||||| | || |||| ||||| || ||||| |||||||| |||| |||| || || | Sbjct: 2639 gatggtgtctgaagactccacctcgagggtgatagtcttgccggtcaaggtt-ttcacaa 2581 Query: 308 anatctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatg 367 | |||| ||| || || | || |||||||| ||||||||||| |||||| |||||| Sbjct: 2580 agatctgcatgcctcc-cctgagacggagcacaaggtggagggtgctctccttctggatg 2522 Query: 368 ttg 370 ||| Sbjct: 2521 ttg 2519 Score = 42.1 bits (21), Expect = 1.2 Identities = 34/39 (87%) Strand = Plus / Minus Query: 332 cggagcaccaggtggagggtngactccttntggatgttg 370 |||||||| ||||||||||| |||||| ||||||||| Sbjct: 3925 cggagcacaaggtggagggtgctctccttttggatgttg 3887
>emb|AJ000655.1|PB655UB Phreatamoeba balamuthi UBI1 sequence, putative polyubiquitin gene Length = 187 Score = 157 bits (79), Expect = 3e-35 Identities = 144/168 (85%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | || |||||||| | |||||||||||| |||||||| || Sbjct: 169 cttctggatgttgtagtccgcgagcgtgcggccgtcctcgagctgctttccggcgaagat 110 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||| Sbjct: 109 gaggcgctgctggtccggagggatgccctccttgtcctggatcttctgcttgacgttgtc 50 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcag 295 || | | | |||| || |||| ||| ||||||||||| |||||||| Sbjct: 49 aatcgagtccgagggctcgacctccagagtgatggtcttccccgtcag 2
>gb|AF502575.1| Musa acuminata ubiquitin (UBQ1) gene, complete cds Length = 1146 Score = 157 bits (79), Expect = 3e-35 Identities = 217/265 (81%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| |||||||||||||||| |||||| ||||||| |||| || |||||||||| || Sbjct: 895 gcacaaggtgaagggtagactccttctgaatgttgtaatctgccagggtgcggccatcct 836 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | |||||||||||||| || ||||| | ||||||||||| || || |||| ||||| || Sbjct: 835 caagctgcttgccggcaaagatgagcctttgctggtccgggggaataccctccttgtcct 776 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 | ||||| ||||| || |||||||||||| | ||| || |||||| || |||||||||| Sbjct: 775 gaatcttggcctttacattgtcgatggtgtccgagctctccaccttaagggtgatggtct 716 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 | || |||| | ||||||| || || | ||| ||||||| |||||||| || ||||| Sbjct: 715 tcccagtcaaag-tcttgacgaagatttgcatgccaccac-ggaggcggaggacaaggtg 658 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||||| ||||||||| Sbjct: 657 gagggtggactccttctggatgttg 633 Score = 157 bits (79), Expect = 3e-35 Identities = 217/265 (81%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| ||||| |||| |||||||||||||| || | || |||||||||| || Sbjct: 439 gcacaaggtggagggtggactccttctggatgttgtaatcagccagggtgcggccatcct 380 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | |||||||||||||| || ||||| | |||||||| ||||| ||||||| ||| | || Sbjct: 379 caagctgcttgccggcaaagatgagcctttgctggtctggaggaatgccctccttatcct 320 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 | ||||| |||||||| |||||||||||| |||| || ||||| || |||||||||| Sbjct: 319 gaatcttagccttgacattgtcgatggtgtcagaactctccacctcgagggtgatggtct 260 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| |||| || ||||||| || || | ||| ||||||| |||||| || || ||||| Sbjct: 259 tgccagtcaagg-tcttgacaaagatttgcatgccaccac-gaaggcgaagtacgaggtg 202 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||||| ||||||||| Sbjct: 201 gagggtggactccttctggatgttg 177 Score = 139 bits (70), Expect = 7e-30 Identities = 211/260 (81%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||||| || | | |||||||| | ||| ||| Sbjct: 662 aggtggagggtggactccttctggatgttgtaatcagccaaggtgcggccgtcctccagc 603 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||||||||| || ||||| | |||||||||||| || ||||||| ||| | ||| ||| Sbjct: 602 tgcttgccggcaaagatgagcctctgctggtccggtggaatgccctccttatcctgaatc 543 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || |||||||| |||||||||||| |||| || ||||| || |||||||||||||| Sbjct: 542 ttggccttgacattgtcgatggtgtcagaactctccacctcgagggtgatggtcttgcca 483 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 |||| || ||||||| || || | ||| ||||| | ||| || ||||| |||||||||| Sbjct: 482 gtcaagg-tcttgacaaagatttgcatgccacc-ccgaagtcgaagcacaaggtggaggg 425 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 424 tggactccttctggatgttg 405 Score = 109 bits (55), Expect = 6e-21 Identities = 163/202 (80%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 |||||||||| |||| | | || ||||| ||||| |||| |||||||||||||| || | Sbjct: 229 tgccaccacgaaggcgaagtacgaggtggagggtggactccttctggatgttgtaatccg 170 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || || ||||||| ||| || ||||| ||||| || || || | |||||||| |||| Sbjct: 169 caagggtccggccatcctcaagttgcttaccggcaaagatcagcctttgctggtctggag 110 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 |||| |||| |||| ||||||||| |||||||| |||||||||||| ||||||| | | Sbjct: 109 ggattccctctttgtcctggatcttagccttgacattgtcgatggtgtcagaggattcaa 50 Query: 268 ccttcagtgtgatggtcttgcc 289 ||| || |||||||||||||| Sbjct: 49 cctcaagggtgatggtcttgcc 28 Score = 67.9 bits (34), Expect = 2e-08 Identities = 109/136 (80%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||||||||| || | |||||| ||||||| |||| || ||||| || | || Sbjct: 1123 gcaccaggtgaagggtggattccttctgaatgttgtaatctgccagggtgcgcccgtcct 1064 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | |||||||| || || || || || | |||||| ||||| || || |||| ||||| || Sbjct: 1063 ccagctgcttcccagcaaagatcagcctctgctgatccggtggaatcccctccttgtcct 1004 Query: 226 ggatcttcgccttgac 241 ||||||| |||||||| Sbjct: 1003 ggatctttgccttgac 988 Score = 48.1 bits (24), Expect = 0.020 Identities = 37/42 (88%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||||||| ||||| || ||||| || |||||| Sbjct: 1130 aggcggagcaccaggtgaagggtggattccttctgaatgttg 1089
>ref|XM_753127.1| Ustilago maydis 521 hypothetical protein (UM02073.1) partial mRNA Length = 1164 Score = 155 bits (78), Expect = 1e-34 Identities = 213/260 (81%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 |||||||| || |||| |||||||||||||| ||| | || |||||||| | || ||| Sbjct: 1136 aggtgaagtgtcgactccttctggatgttgtagtccgagagcgtgcggccgtcttcaagc 1077 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||| || ||||| ||||| ||||||||||| || ||||| |||| ||||| ||||||| Sbjct: 1076 tgcttaccagcgaagatgagacgctgctggtcaggggggataccctccttgtcctggatc 1017 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||||||||||||||| ||| | || |||| ||||| || ||||| |||||||| Sbjct: 1016 ttggccttgacgttgtcgattgtgtcggaagactccacctcaagggtgatcgtcttgccg 957 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 ||||| | ||||||| || |||| ||||||||||| ||| || | ||| ||||| || | Sbjct: 956 gtcagag-tcttgacaaagatctgcataccaccac-gaagtcgcaacacaaggtgaagtg 899 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 898 tcgactccttctggatgttg 879 Score = 139 bits (70), Expect = 7e-30 Identities = 202/248 (81%), Gaps = 2/248 (0%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||||| ||| | || |||||||| | || |||||||| || ||| Sbjct: 650 gactccttctggatgttgtagtccgagagcgtgcggccgtcttcaagctgcttaccagcg 591 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || ||||| ||||||||||| || ||||| |||| ||||| ||||||||| |||||||| Sbjct: 590 aagatgagacgctgctggtcaggggggataccctccttgtcctggatcttggccttgaca 531 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttctt 302 |||||||| ||| | || |||| ||||| || ||||| |||||||| ||||| | |||| Sbjct: 530 ttgtcgattgtgtcggaagactccacctcaagggtgatcgtcttgccggtcagag-tctt 472 Query: 303 gacnaanatctncataccaccacanaaggcggagcaccaggtggagggtngactccttnt 362 ||| || |||| ||||||||||| ||| || | ||| ||||| || || |||||||| | Sbjct: 471 gacaaagatctgcataccaccac-gaagtcgcaacacaaggtgaagtgtcgactccttct 413 Query: 363 ggatgttg 370 |||||||| Sbjct: 412 ggatgttg 405 Score = 123 bits (62), Expect = 4e-25 Identities = 209/260 (80%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 |||||||| || |||| |||||||||||||| ||| | || || ||||| | || ||| Sbjct: 434 aggtgaagtgtcgactccttctggatgttgtagtccgagagcgttcggccgtcttcaagc 375 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||| || || || ||||| ||||||||||| || ||||| |||| ||||| ||||||| Sbjct: 374 tgcttaccagcaaagatgagacgctgctggtcaggggggataccctccttgtcctggatc 315 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || |||||||| |||||||| ||| | || |||| ||||| || ||||| |||||||| Sbjct: 314 ttggccttgacattgtcgattgtgtcggaagactccacctcaagggtgatcgtcttgccg 255 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 ||||| | ||||||| || |||| ||||||||| | ||| || | ||| ||||| || | Sbjct: 254 gtcagag-tcttgacaaagatctgcataccaccgc-gaagtcgcaacacaaggtgaagtg 197 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 196 tcgactccttctggatgttg 177 Score = 119 bits (60), Expect = 7e-24 Identities = 173/213 (81%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 |||||||| || |||| |||||||||||||| ||| | || || ||||| | || ||| Sbjct: 908 aggtgaagtgtcgactccttctggatgttgtagtccgagagcgttcggccgtcttcaagc 849 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||| || || || ||||| ||||||||||| || ||||| |||| ||||| ||||||| Sbjct: 848 tgcttaccagcaaagatgagacgctgctggtcaggggggataccctccttgtcctggatc 789 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || |||||||| |||||||| ||| | || |||| ||||| || ||||| |||||||| Sbjct: 788 ttggccttgacattgtcgattgtgtcggaagactccacctcaagggtgatcgtcttgccg 729 Query: 291 gtcagggttcttgacnaanatctncataccacc 323 ||||| | ||||||| || |||| ||||||||| Sbjct: 728 gtcagag-tcttgacaaagatctgcataccacc 697 Score = 107 bits (54), Expect = 3e-20 Identities = 167/207 (80%), Gaps = 1/207 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 |||||||| || |||| |||||||||||||| ||| | || || ||||| | || ||| Sbjct: 206 aggtgaagtgtcgactccttctggatgttgtagtccgagagcgttcggccgtcttcaagc 147 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||| || || || ||||| ||||||||||| || ||||| |||| ||||| ||||||| Sbjct: 146 tgcttaccagcaaagatgagacgctgctggtcaggggggataccctccttgtcctggatc 87 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || |||||||| |||||||| ||| | || |||| ||||| || ||||| |||||||| Sbjct: 86 ttggccttgacattgtcgattgtgtcggaagactccacctcaagggtgatcgtcttgccg 27 Query: 291 gtcagggttcttgacnaanatctncat 317 ||||| | ||||||| || |||| ||| Sbjct: 26 gtcagag-tcttgacaaagatctgcat 1
>gb|AF386524.1|AF386524 Pyrus communis ubiquitin extension protein (UBI) mRNA, complete cds Length = 651 Score = 155 bits (78), Expect = 1e-34 Identities = 163/194 (84%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| || || |||| |||||||||||||| ||| | || || ||||| | || Sbjct: 216 gcaccaggtggagagtggactccttctggatgttgtagtcggcgagggttcggccgtcct 157 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||| | Sbjct: 156 cgagctgcttgccggcgaagatgaggcgctgctggtccggggggatgccctccttgtctt 97 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| ||||| | ||||||| |||| || || ||||||| Sbjct: 96 ggatcttggccttgacattgtcaatggtatcggaggactcgacctctagggttatggtct 37 Query: 286 tgcccgtcagggtt 299 | ||||| |||||| Sbjct: 36 tacccgttagggtt 23 Score = 63.9 bits (32), Expect = 3e-07 Identities = 39/42 (92%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 |||||||||||||||||||| || |||||||| ||||||||| Sbjct: 223 aggcggagcaccaggtggagagtggactccttctggatgttg 182
>gb|AF361365.1| Oncorhynchus mykiss polyubiquitin mRNA, complete cds Length = 1162 Score = 153 bits (77), Expect = 5e-34 Identities = 215/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 ||||||||||| || |||| |||||||||||||| ||| | || ||||| |||| || Sbjct: 949 accaggtgaagagtggactccttctggatgttgtagtcagagagcgtgcgaccatcttcc 890 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||| || ||||| || | |||||||||||| || |||||||||| ||||| |||| Sbjct: 889 agctgcttaccagcgaagatcaagcgctgctggtctggggggatgccctccttgtcctgg 830 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||||||||| ||||||||| || || || |||| ||| |||||||||||| Sbjct: 829 atcttggccttgacgttctcgatggtgtcactgggctcgacctccagggtgatggtcttg 770 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || || |||| |||| || || |||| |||||| || | || |||||||| || |||| Sbjct: 769 ccggtaaggg-tcttcacgaagatctgcatacctcc-cctcagacggagcacaagatgga 712 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 711 gggtggactccttctggatgttg 689 Score = 141 bits (71), Expect = 2e-30 Identities = 206/253 (81%), Gaps = 2/253 (0%) Strand = Plus / Minus Query: 117 agggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttg 176 ||||| |||| |||||||||||||| ||| | |||||||| |||| || ||||||||| Sbjct: 484 agggtggactccttctggatgttgtagtcggagagagtgcgaccatcttccagctgcttg 425 Query: 177 ccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgcc 236 ||||| || || | |||||||||||| || |||||||||| ||||| ||||||||| ||| Sbjct: 424 ccggcaaagatcaagcgctgctggtctggggggatgccctccttgtcctggatcttggcc 365 Query: 237 ttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagg 296 || || || || |||||| || || || |||| ||| |||||||||||||| || ||| Sbjct: 364 ttcacattctcaatggtgtcactgggctcaacctccagggtgatggtcttgccggtaagg 305 Query: 297 gttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggagggtngact 356 | |||| || || |||| ||||||||| | || |||||||| || |||||||| |||| Sbjct: 304 g-tcttcacgaagatctgcataccacc-cctcagacggagcacaagatggagggtggact 247 Query: 357 ccttntggatgtt 369 |||| |||||||| Sbjct: 246 ccttctggatgtt 234 Score = 127 bits (64), Expect = 3e-26 Identities = 205/254 (80%), Gaps = 2/254 (0%) Strand = Plus / Minus Query: 117 agggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttg 176 ||||| |||| |||||||||||||| ||| | |||||||| |||| || ||||||||| Sbjct: 712 agggtggactccttctggatgttgtagtcggagagagtgcgaccatcttccagctgcttg 653 Query: 177 ccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgcc 236 ||||| || || | |||||||||||| || |||||||||| ||||| ||||||||| ||| Sbjct: 652 ccggcaaagatcaagcgctgctggtctggggggatgccctccttgtcctggatcttggcc 593 Query: 237 ttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagg 296 || || || || |||||| || || || |||| ||| |||||||||||||| || ||| Sbjct: 592 ttcacattctcaatggtgtcactgggctcaacctccagggtgatggtcttgccggtaagg 533 Query: 297 gttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggagggtngact 356 | |||| || || |||| |||||| || | || || ||||| || |||||||| |||| Sbjct: 532 g-tcttcacgaagatctgcatacctcc-cctcagacgaagcacaagatggagggtggact 475 Query: 357 ccttntggatgttg 370 |||| ||||||||| Sbjct: 474 ccttctggatgttg 461 Score = 113 bits (57), Expect = 4e-22 Identities = 142/173 (82%) Strand = Plus / Minus Query: 117 agggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttg 176 ||||| |||| |||||||||||| | ||| | |||||||| |||| || |||||||| Sbjct: 256 agggtggactccttctggatgttatagtcggagagagtgcgaccatcttccagctgctta 197 Query: 177 ccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgcc 236 |||||||| || | |||||||||||| || |||||||||| ||||| ||||||||| ||| Sbjct: 196 ccggcgaagatcaagcgctgctggtctggggggatgccctccttgtcctggatcttggcc 137 Query: 237 ttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcc 289 || || || ||||||||| || || || |||| ||| |||||||||||||| Sbjct: 136 ttcacattctcgatggtgtcactgggctcgacctccagggtgatggtcttgcc 84
>gb|BC114001.1| Bos taurus polyubiquitin, mRNA (cDNA clone MGC:133799 IMAGE:8064312), complete cds Length = 1093 Score = 153 bits (77), Expect = 5e-34 Identities = 215/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 456 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 397 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||||| ||| | |||| Sbjct: 396 agctgcttgccggcaaagatgagcctctgctggtcggggggaatgccctccttatcctgg 337 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||| | |||||||||||||||| Sbjct: 336 atcttggccttcacgttctcgatggtgtcactgggctccacttccagtgtgatggtcttg 277 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || ||||| |||||||| | Sbjct: 276 ccggtcaggg-tcttcacgaaaatctgcataccacc-cctcagacggaggaccaggtgca 219 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 218 gggtcgactctttctggatgttg 196 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 684 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 625 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 624 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 565 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 564 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 505 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || ||||| |||||||| | Sbjct: 504 ccggtcaggg-tcttcacgaagatctgcataccacc-cctcagacggaggaccaggtgca 447 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 446 gggtcgactctttctggatgttg 424 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 912 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 853 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 852 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 793 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 792 atcttggccttcacgttctcgatggtgtcactgggctccacttccagggtgatggtcttg 733 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || ||||| |||||||| | Sbjct: 732 ccggtcaggg-tcttcacgaagatctgcataccacc-cctcagacggaggaccaggtgca 675 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 674 gggtcgactctttctggatgttg 652 Score = 127 bits (64), Expect = 3e-26 Identities = 158/192 (82%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 228 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 169 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 168 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 109 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 108 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 49 Query: 288 cccgtcagggtt 299 || ||||||||| Sbjct: 48 ccggtcagggtt 37
>gb|AF506969.1| Equus caballus ubiquitin mRNA, complete cds Length = 1157 Score = 153 bits (77), Expect = 5e-34 Identities = 215/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| || || |||| |||||||||||||| ||| | || ||||| |||| ||| Sbjct: 555 accaggtgcagagtggactccttctggatgttgtagtcagacagggtgcgcccatcctcc 496 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || |||||||||| ||| | |||| Sbjct: 495 agctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccctccttatcctgg 436 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||||||||| ||||||||| | || || ||||| ||| |||||||||||| Sbjct: 435 atcttggccttgacgttctcgatggtgtcgctgggctccacctccagggtgatggtcttg 376 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| |||||| || | ||||| ||||||||||| | Sbjct: 375 ccggtcaggg-tcttcacgaaaatctgcataccgcctc-tcaggcgcagcaccaggtgca 318 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 317 gggtcgactctttctggatgttg 295 Score = 137 bits (69), Expect = 3e-29 Identities = 160/193 (82%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| ||||||||||||| || | ||||||||||||| | Sbjct: 329 gcaccaggtgcagggtcgactctttctggatgttgtaatcggaaagagtgcggccatctt 270 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| || || ||||| | ||||||||| || |||||||||| ||| | || Sbjct: 269 ccagctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccctccttatcct 210 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||||||||| ||||||||| | || || ||||| ||| |||||||||| Sbjct: 209 ggatcttggccttgacgttctcgatggtgtcgctgggctccacctccagggtgatggtct 150 Query: 286 tgcccgtcagggt 298 |||| |||||||| Sbjct: 149 tgccggtcagggt 137 Score = 125 bits (63), Expect = 1e-25 Identities = 213/265 (80%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| ||||||||||||| || | ||||||||||||| | Sbjct: 1013 gcaccaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatctt 954 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| || || ||||| | ||||||||| || |||||||||| ||| | || Sbjct: 953 ccagctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccctccttatcct 894 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| || || ||||||||| | || || ||||| ||| |||||||||| Sbjct: 893 ggatcttggccttcacattctcgatggtgtcgctgggctccacctccagggtgatggtct 834 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| ||||||| |||| || || |||| ||| ||||| | || || || |||||||| Sbjct: 833 tgccggtcaggg-tcttcacgaaaatctgcatcccacctc-tgagacgcagaaccaggtg 776 Query: 346 gagggtngactccttntggatgttg 370 || || |||||||| ||||||||| Sbjct: 775 cagagtggactccttctggatgttg 751 Score = 93.7 bits (47), Expect = 4e-16 Identities = 153/191 (80%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| || || |||| |||||||||||||| || | || ||||| |||| ||| Sbjct: 783 accaggtgcagagtggactccttctggatgttgtaatcagacagggtgcgcccatcctcc 724 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || |||| | ||||||||| || |||||||||| ||| | |||| Sbjct: 723 agctgcttgcctgcaaagatgaacctctgctggtcgggggggatgccctccttatcctgg 664 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| | || || ||||| ||| || ||||||||| Sbjct: 663 atcttggccttcacattctcgatggtgtcgctgggctccacctccagggtaatggtcttg 604 Query: 288 cccgtcagggt 298 || |||||||| Sbjct: 603 ccggtcagggt 593 Score = 50.1 bits (25), Expect = 0.005 Identities = 35/39 (89%) Strand = Plus / Minus Query: 332 cggagcaccaggtggagggtngactccttntggatgttg 370 |||||||||||||| ||||| ||||| || ||||||||| Sbjct: 1017 cggagcaccaggtgcagggtcgactctttctggatgttg 979
>emb|X08013.1|CSUBIQ Chinese hamster mRNA for ubiquitin Length = 752 Score = 153 bits (77), Expect = 5e-34 Identities = 215/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 521 accaggtgcagggtggactctttctggatgttgtaatcagaaagagtgcggccatcttcc 462 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| ||||||||||| || |||||||||| ||| | |||| Sbjct: 461 agctgcttgccggcaaagatgagtcgctgctggtcgggggggatgccctccttatcctgg 402 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || | ||||| || |||||||||||| Sbjct: 401 atcttggccttgacattctcgatggtgtcactgggttccacctctagggtgatggtcttg 342 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 341 ccggtcaggg-tcttcacgaaaatctgcatgccacc-cctgaggcggaggaccaggtgca 284 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 283 gggtggactctttctggatgttg 261 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 749 accaggtgcagggtggactctttctggatgttgtaatcagaaagagtgcggccatcttcc 690 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| ||||||||||| || |||||||||| || | |||| Sbjct: 689 agctgcttgccggcaaagatgagtcgctgctggtcgggggggatgccctctttatcctgg 630 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 629 atcttggccttcacattctcgatggtgtcactgggctccacctctagggtgatggtcttg 570 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | |||||||| |||||||| | Sbjct: 569 ccagtcaggg-tcttcacgaagatctgcatgccacc-cctgaggcggaggaccaggtgca 512 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 511 gggtggactctttctggatgttg 489 Score = 133 bits (67), Expect = 4e-28 Identities = 158/191 (82%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 293 accaggtgcagggtggactctttctggatgttgtaatcagaaagagtgcggccatcttcc 234 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| ||||||||||| || |||||||||| || | |||| Sbjct: 233 agctgcttgccggcaaagatgagtcgctgctggtcgggggggatgccctctttatcctgg 174 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || ||||||||| || || || ||||| || |||||||||||| Sbjct: 173 atcttggccttgacattttcgatggtgtcactgggctccacctctagggtgatggtcttg 114 Query: 288 cccgtcagggt 298 || |||||||| Sbjct: 113 ccggtcagggt 103
>gb|U29162.1|ZMU29162 Zea mays clone MubG9 ubiquitin gene, complete cds Length = 2913 Score = 153 bits (77), Expect = 5e-34 Identities = 162/193 (83%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||| ||| ||||| |||| |||||||||||||| ||| | || ||||| || | || Sbjct: 1435 gcaccaagtggagggttgactccttctggatgttgtagtcagcaagtgtgcgtccgtcct 1376 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| || || ||||||||||| ||||||||||||| ||||| || Sbjct: 1375 caagctgcttgccggcgaagataagccgctgctggtcaggagggatgccctccttgtcct 1316 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| |||||| |||| |||| ||||| || ||||| |||| Sbjct: 1315 ggatcttagccttgacattgtcaatggtgtcagaagactccacctcgagggtgatagtct 1256 Query: 286 tgcccgtcagggt 298 |||| || ||||| Sbjct: 1255 tgccggtgagggt 1243 Score = 143 bits (72), Expect = 5e-31 Identities = 199/243 (81%), Gaps = 2/243 (0%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | || || | |||| ||| | |||||||||||| || || Sbjct: 1641 cttctggatgttgtagtcagcaagggtcctcccatcctccaactgcttgccggcaaagat 1582 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| || |||||||| || |||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 1581 gagacgttgctggtcaggtgggatgccctccttgtcctggatctttgccttgacattgtc 1522 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacna 307 |||||| | ||||||| ||||| || ||||| |||||||| |||| || ||||||| | Sbjct: 1521 aatggtgtctgaggactccacctcaagggtgattgtcttgccagtcaagg-tcttgacaa 1463 Query: 308 anatctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatg 367 | |||| ||| || || | |||||| ||||||| ||||||||| |||||||| |||||| Sbjct: 1462 agatctgcatgcctcc-cctaaggcgcagcaccaagtggagggttgactccttctggatg 1404 Query: 368 ttg 370 ||| Sbjct: 1403 ttg 1401 Score = 141 bits (71), Expect = 2e-30 Identities = 215/265 (81%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| || |||||| ||||||| || | || ||||| |||| || Sbjct: 1891 gcaccaggtggagggtgctctccttctgaatgttgtaatccgcaagggtgcgtccatcct 1832 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | |||||||||||||| || || || |||||||||||||| |||||||||| ||||| || Sbjct: 1831 ccagctgcttgccggcaaagataagacgctgctggtccggcgggatgccctccttgtcct 1772 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| ||||| ||||| | || |||| ||||| || |||||||||| Sbjct: 1771 ggatcttggccttgacattgtcaatggtatctgaagactccacctcaagagtgatggtct 1712 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| || |||||| || || || |||| ||||||||| | ||| || ||||||| ||| Sbjct: 1711 tgccagtaagggtt-ttcacaaagatctgcataccacc-cctaagacgcagcaccaagtg 1654 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||| ||||||||| Sbjct: 1653 gagggtgctctccttctggatgttg 1629 Score = 133 bits (67), Expect = 4e-28 Identities = 214/265 (80%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| || ||||||||| |||| ||||| || ||||| |||| || Sbjct: 2347 gcaccaggtggagggtgctctccttctggatattgtagtctgcaagggtgcgaccatcct 2288 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| || || ||||||||||| || || || |||| ||||| || Sbjct: 2287 ccagctgcttgccggcgaagatcagacgctgctggtctgggggaatcccctccttgtcct 2228 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| ||||||||||||||| ||||| || |||| ||| || ||||||| Sbjct: 2227 ggatcttagccttcacgttgtcgatggtgtcagagctctcaacctccagggttatggtct 2168 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| |||| || |||| || || |||| ||| || || | |||||| ||||||| ||| Sbjct: 2167 tgccagtcaagg-tcttcacaaagatctgcatgcctcc-cctaaggcgcagcaccaagtg 2110 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||| || |||||| Sbjct: 2109 gagggtgctctccttctgtatgttg 2085 Score = 85.7 bits (43), Expect = 9e-14 Identities = 105/127 (82%) Strand = Plus / Minus Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||||||||| || || ||||||||||| ||||||||||||| |||| |||| Sbjct: 2057 agctgcttgccggcgaagataagccgctgctggtcaggagggatgccctctttgtcctgg 1998 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || || |||||| | ||| || |||| || |||||||||||| Sbjct: 1997 atcttggccttcacattatcaatggtgtcggagctctcaacctccaaggtgatggtcttg 1938 Query: 288 cccgtca 294 || |||| Sbjct: 1937 ccagtca 1931 Score = 42.1 bits (21), Expect = 1.2 Identities = 31/35 (88%) Strand = Plus / Minus Query: 332 cggagcaccaggtggagggtngactccttntggat 366 |||||||||||||||||||| |||||| ||||| Sbjct: 2351 cggagcaccaggtggagggtgctctccttctggat 2317
>ref|XM_753494.1| Ustilago maydis 521 hypothetical protein (UM02440.1) partial mRNA Length = 387 Score = 151 bits (76), Expect = 2e-33 Identities = 188/228 (82%), Gaps = 1/228 (0%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 ||||||||||| | |||| ||||| ||||| || | |||||||||||||| ||| | Sbjct: 227 ccaccacgcagacggagcacaaggtggagggtcgattccttctggatgttgtagtccgag 168 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || |||||||||| |||||||||||| |||||||| || |||||||||||||| || || Sbjct: 167 agggtgcggccatcctcgagctgcttaccggcgaagatcaggcgctgctggtcgggggga 108 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 || |||| ||||| ||| ||||| |||||||| |||||||||||| | ||||||| |||| Sbjct: 107 ataccctccttgtcctgaatcttggccttgacattgtcgatggtgtccgaggactccacc 48 Query: 270 ttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncat 317 | || || |||||||| |||||||| | ||||||| || |||| ||| Sbjct: 47 tcaagggtaatggtcttacccgtcagag-tcttgacgaaaatctgcat 1 Score = 50.1 bits (25), Expect = 0.005 Identities = 35/39 (89%) Strand = Plus / Minus Query: 332 cggagcaccaggtggagggtngactccttntggatgttg 370 |||||||| ||||||||||| || ||||| ||||||||| Sbjct: 215 cggagcacaaggtggagggtcgattccttctggatgttg 177
>ref|XM_755642.1| Ustilago maydis 521 hypothetical protein (UM04588.1) partial mRNA Length = 480 Score = 151 bits (76), Expect = 2e-33 Identities = 188/228 (82%), Gaps = 1/228 (0%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 ||||||||||| | | |||||| ||| |||||||||| |||||||||||||| ||| | Sbjct: 227 ccaccacgcagacgaagcaccaagtgcagggtagactccttctggatgttgtagtccgaa 168 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || || || || | |||||||||||| || ||||| || || ||||||||||| || || Sbjct: 167 agcgtacgtccgtcctcgagctgcttaccagcgaagatcagacgctgctggtcgggcgga 108 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| ||||||||| |||||||| |||||||||||| | || |||| |||| Sbjct: 107 atgccctccttgtcctggatcttggccttgacattgtcgatggtgtccgaagactccacc 48 Query: 270 ttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncat 317 | || ||||||||||| ||||| |||| ||||||| || |||| ||| Sbjct: 47 tcgagagtgatggtcttacccgtgaggg-tcttgacaaagatctgcat 1
>emb|AJ007936.1|GPU7936 Gibberella pulicaris ubi1 gene Length = 2927 Score = 151 bits (76), Expect = 2e-33 Identities = 228/281 (81%), Gaps = 2/281 (0%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| |||| | |||| ||||| || || |||| ||| |||||||||| ||| | Sbjct: 2362 ccaccacgaaggcgaagcacaaggtggagagtcgactccttttggatgttgtagtcagag 2303 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || || || || | |||||||||||||||||||||||| | ||||||||||| ||||| Sbjct: 2302 agggtacgaccgtcctcgagctgcttgccggcgaaaatcaatcgctgctggtcaggagga 2243 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 || || | ||||| ||||||||| | |||||| |||||||| || |||| |||| ||| Sbjct: 2242 ataccttccttgtcctggatcttggacttgacattgtcgatagtatcagatgactcgacc 2183 Query: 270 ttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaa 329 | || || ||||||||||| || |||| ||||||| || |||| ||||||||||| || Sbjct: 2182 tcaagggtaatggtcttgccagtaaggg-tcttgacgaaaatctgcataccaccac-gaa 2125 Query: 330 ggcggagcaccaggtggagggtngactccttntggatgttg 370 |||| ||||| |||||||| || |||||||| ||||||||| Sbjct: 2124 ggcgaagcacaaggtggagagtcgactccttttggatgttg 2084 Score = 135 bits (68), Expect = 1e-28 Identities = 223/277 (80%), Gaps = 2/277 (0%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| |||| | |||| ||||| || || |||| ||| |||||||||| ||| | Sbjct: 2134 ccaccacgaaggcgaagcacaaggtggagagtcgactccttttggatgttgtagtcagag 2075 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || || || || | |||||||||||||||||||||||| | ||||||||||| ||||| Sbjct: 2074 agggtacgaccgtcctcgagctgcttgccggcgaaaatcaatcgctgctggtcaggagga 2015 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||| | ||||| ||||||||| | |||||| |||||||| || |||| |||| ||| Sbjct: 2014 atgccttccttgtcctggatcttggacttgacattgtcgatagtatcagatgactcgacc 1955 Query: 270 ttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaa 329 | || || ||||||||||| || |||| ||||||| || |||| ||||||||||| || Sbjct: 1954 tcaagggtaatggtcttgccggtgaggg-tcttgacgaagatctgcataccaccac-gaa 1897 Query: 330 ggcggagcaccaggtggagggtngactccttntggat 366 ||||||| || || || ||||| ||||| || ||||| Sbjct: 1896 ggcggaggacgagatgaagggttgactctttttggat 1860 Score = 93.7 bits (47), Expect = 4e-16 Identities = 112/135 (82%) Strand = Plus / Minus Query: 164 ctcgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtn 223 |||||||||||||||||||||||| | ||||||||||| ||||| ||||| | ||| | Sbjct: 1832 ctcgagctgcttgccggcgaaaatcaatcgctgctggtcaggaggaatgccttccttatc 1773 Query: 224 ctggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggt 283 ||||||||| | |||||| |||||||| || |||| |||| |||| || |||||||| Sbjct: 1772 ctggatcttggacttgacattgtcgatagtatcagatgactcgacctcaagggtgatggt 1713 Query: 284 cttgcccgtcagggt 298 |||||| || ||||| Sbjct: 1712 cttgccggtgagggt 1698 Score = 83.8 bits (42), Expect = 4e-13 Identities = 134/167 (80%) Strand = Plus / Minus Query: 132 tggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaatgagg 191 |||||||||| ||| | || |||||||||| ||| |||||||| || ||||| || || Sbjct: 2602 tggatgttgtagtcggagagggtgcggccatcctcaagctgcttaccagcgaagataagt 2543 Query: 192 cgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtcgatg 251 ||||||||||| ||||| || || | ||||| ||||||||| | |||||| |||||||| Sbjct: 2542 cgctgctggtcaggaggaataccttccttgtcctggatcttggacttgacattgtcgata 2483 Query: 252 gtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggt 298 || |||| |||| |||| || || ||||||||||| || ||||| Sbjct: 2482 gtatcagatgactcgacctcaagggtaatggtcttgccagtaagggt 2436
>ref|XM_505175.1| Yarrowia lipolytica CLIB122, YALI0F08745g predicted mRNA Length = 387 Score = 151 bits (76), Expect = 2e-33 Identities = 149/176 (84%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||||| ||| | ||||| ||||| | |||||||||||| |||||| Sbjct: 194 gactccttctggatgttgtagtcggaaagagttcggccgtcctcgagctgcttaccggcg 135 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || || || |||||||||||||| ||||| |||| ||||| ||||||||| | ||||||| Sbjct: 134 aagataagtcgctgctggtccggggggattccctccttgtcctggatcttggacttgacg 75 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggt 298 ||||| |||||| ||||||||| ||||| || ||||| |||||||| || ||||| Sbjct: 74 ttgtcaatggtgtcagaggactccacctcgagggtgatagtcttgccagtaagggt 19
>gb|AY190601.1| Malus x domestica ubiquitin/ribosomal fusion protein mRNA, complete cds Length = 729 Score = 151 bits (76), Expect = 2e-33 Identities = 161/192 (83%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||| | |||| Sbjct: 269 accaggtggagggtggactccttctggatgttgtagtcagcgagggtgcggttgtcctcg 210 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||||||||||||||||||||||||||| || ||||| | ||||| ||| Sbjct: 209 agctgcttgccggcgaaaatgaggcgctgctggtccggcggaatgccttccttgtcttgg 150 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| |||||||||| | | || |||| |||| || ||||||||||| Sbjct: 149 atcttggccttgacattgtcgatggagtcggaagactcgacctctagggtgatggtctta 90 Query: 288 cccgtcagggtt 299 ||||| |||||| Sbjct: 89 cccgttagggtt 78 Score = 63.9 bits (32), Expect = 3e-07 Identities = 39/42 (92%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 278 aggcggagtaccaggtggagggtggactccttctggatgttg 237
>gb|AF298826.1|AF298826 Prunus avium ubiquitin/ribosomal protein 27a (Ubi) mRNA, complete cds Length = 1323 Score = 151 bits (76), Expect = 2e-33 Identities = 175/211 (82%) Strand = Plus / Minus Query: 89 gccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctgg 148 ||||||||| |||| | |||| ||||| ||||| || | |||||||||||||| || | Sbjct: 262 gccaccacggaggcgaagcacaaggtggagggtcgattccttctggatgttgtaatcggc 203 Query: 149 nagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggagg 208 || || ||||| | ||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 202 tagggttcggccgtcctcgagctgcttgccggcgaagatgaggcgctgctggtctggggg 143 Query: 209 gatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncac 268 ||||||| ||||| |||||||| ||||| || |||||||||||| ||||||||| || Sbjct: 142 aatgccctccttgtcttggatcttggccttcacattgtcgatggtgtcagaggactcgac 83 Query: 269 cttcagtgtgatggtcttgcccgtcagggtt 299 || || || |||||||| ||||| |||||| Sbjct: 82 ctctagggtaatggtcttacccgttagggtt 52 Score = 48.1 bits (24), Expect = 0.020 Identities = 37/42 (88%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||| ||||| ||||||||||| || ||||| ||||||||| Sbjct: 252 aggcgaagcacaaggtggagggtcgattccttctggatgttg 211
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 151 bits (76), Expect = 2e-33 Identities = 149/176 (84%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||||| ||| | ||||| ||||| | |||||||||||| |||||| Sbjct: 1219041 gactccttctggatgttgtagtcggaaagagttcggccgtcctcgagctgcttaccggcg 1218982 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || || || |||||||||||||| ||||| |||| ||||| ||||||||| | ||||||| Sbjct: 1218981 aagataagtcgctgctggtccggggggattccctccttgtcctggatcttggacttgacg 1218922 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggt 298 ||||| |||||| ||||||||| ||||| || ||||| |||||||| || ||||| Sbjct: 1218921 ttgtcaatggtgtcagaggactccacctcgagggtgatagtcttgccagtaagggt 1218866 Score = 123 bits (62), Expect = 4e-25 Identities = 160/195 (82%), Gaps = 1/195 (0%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||||| ||| | || || ||||| | |||||||||||| |||||| Sbjct: 1337346 gactccttctggatgttgtagtcagaaagggttcggccgtcctcgagctgcttaccggcg 1337287 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || || || |||||||||||||| || || |||| ||||| ||||||||| | ||||||| Sbjct: 1337286 aagataagtcgctgctggtccgggggaattccctccttgtcctggatcttggacttgacg 1337227 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttctt 302 |||||||||||| | || |||| ||||| || ||||| ||||| || || |||| |||| Sbjct: 1337226 ttgtcgatggtgtcggaagactccacctcgagggtgatagtcttaccggtaaggg-tctt 1337168 Query: 303 gacnaanatctncat 317 ||| || |||| ||| Sbjct: 1337167 gacaaaaatctgcat 1337153
>gb|DQ216245.1| Taeniopygia guttata clone 0065P0025D10 ubiquitin C variant 5-like mRNA, complete sequence Length = 1438 Score = 149 bits (75), Expect = 7e-33 Identities = 216/265 (81%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| || | ||||||||||||| ||| | || ||||| |||| | Sbjct: 624 gcaccaggtgcagggtggattctttctggatgttgtagtcagacagggtgcgcccatctt 565 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| |||||||| || | ||||||||| || || ||||||| ||||| || Sbjct: 564 ccagctgcttgccagcgaaaatcagcctctgctggtctgggggaatgccctccttgtcct 505 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||||||||| ||||||||| || || || ||||| || |||||||||| Sbjct: 504 ggatcttggccttgacgttctcgatggtgtcactgggctccacctcaagagtgatggtct 445 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| ||||||||| || || || |||| ||| ||||| | ||||| ||||||||||| Sbjct: 444 tgccagtcagggtt-ttcacaaagatctgcatcccacctc-tcaggcgcagcaccaggtg 387 Query: 346 gagggtngactccttntggatgttg 370 ||||| || ||||| ||||||||| Sbjct: 386 cagggtggattccttctggatgttg 362 Score = 109 bits (55), Expect = 6e-21 Identities = 211/265 (79%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| || || |||| |||||||||||||| ||| | || ||||| |||| | Sbjct: 1080 gcaccaggtgcagagttgactccttctggatgttgtagtcggacagggtgcgcccatctt 1021 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| |||||||| || | ||||||||| || || ||||| | ||||| || Sbjct: 1020 ccagctgcttgccagcgaaaatcagcctctgctggtctgggggaatgccttccttgtcct 961 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| || || ||||||||| || || || || | ||| |||||||||| Sbjct: 960 ggatcttggccttcacattctcgatggtgtcactgggctcaacttccagggtgatggtct 901 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| ||||||| |||| || || |||| ||| ||||| | ||||| || || ||||| Sbjct: 900 tgccagtcaggg-tcttcacgaagatctgcatcccacc-cctgaggcgcaggacaaggtg 843 Query: 346 gagggtngactccttntggatgttg 370 ||||| || ||||| ||||||||| Sbjct: 842 cagggtggattccttctggatgttg 818 Score = 107 bits (54), Expect = 3e-20 Identities = 207/260 (79%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| || | |||||||||||||| ||| | | ||| || |||| ||| ||| Sbjct: 847 aggtgcagggtggattccttctggatgttgtagtcggacaaagtacgaccatcctccagc 788 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||| || |||||||| || | ||||||||| || || ||||| | ||||| ||||||| Sbjct: 787 tgcttaccagcgaaaatcagcctctgctggtctgggggaatgccttccttgtcctggatc 728 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| || || || |||||| || || || ||||| || |||||||||||||| Sbjct: 727 ttggccttcacattttcaatggtgtcactgggctccacctcgagagtgatggtcttgccg 668 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 ||||||| ||||||| || |||| ||| ||||| | ||||| ||||||||||| |||| Sbjct: 667 gtcaggg-tcttgacgaagatctgcatcccacc-cctgaggcgcagcaccaggtgcaggg 610 Query: 351 tngactccttntggatgttg 370 | || || || ||||||||| Sbjct: 609 tggattctttctggatgttg 590 Score = 101 bits (51), Expect = 2e-18 Identities = 210/265 (79%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| || | |||||||||||||| ||| | || ||||| |||| || Sbjct: 396 gcaccaggtgcagggtggattccttctggatgttgtagtcagagagggtgcgcccatcct 337 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | || ||||| || || || || || | ||||||||| |||||||| || | ||||| || Sbjct: 336 ccagttgcttaccagcaaagatcagcctctgctggtcaggagggataccttccttgtcct 277 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| || || || |||||| || || || || | ||| |||||||||| Sbjct: 276 ggatcttggccttcacattttcaatggtgtcactgggctcaacttccagggtgatggtct 217 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| |||||||| ||| || || |||| ||| ||||| | | |||| ||||||||||| Sbjct: 216 tgccagtcagggt-cttcacaaagatctgcatcccacctctca-ggcgcagcaccaggtg 159 Query: 346 gagggtngactccttntggatgttg 370 ||||| || ||||| ||||||||| Sbjct: 158 cagggtggattccttctggatgttg 134 Score = 85.7 bits (43), Expect = 9e-14 Identities = 121/149 (81%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| || | |||||||||||||| ||| | || ||||| |||| | Sbjct: 168 gcaccaggtgcagggtggattccttctggatgttgtagtcagacagggtgcgcccatctt 109 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| || || || || | ||||||||| |||||||| || | ||||| || Sbjct: 108 ccagctgcttgccagcaaagatcagcctctgctggtcaggagggataccttccttgtcct 49 Query: 226 ggatcttcgccttgacgttgtcgatggtg 254 ||||||| ||||| || || ||||||||| Sbjct: 48 ggatcttggccttcacattctcgatggtg 20 Score = 48.1 bits (24), Expect = 0.020 Identities = 37/42 (88%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||| ||||||||||| || || |||||||| ||||||||| Sbjct: 1087 aggcgcagcaccaggtgcagagttgactccttctggatgttg 1046
>ref|XM_953710.1| Neurospora crassa OR74A hypothetical protein ( (X74405) polyubiquitin [Artemia franciscana] ) (NCU05995.1) partial mRNA Length = 918 Score = 149 bits (75), Expect = 7e-33 Identities = 210/257 (81%), Gaps = 2/257 (0%) Strand = Plus / Minus Query: 114 tgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgc 173 ||||||||||||| |||||| ||||||| ||| | ||||||||| | || |||||| Sbjct: 431 tgaagggtagactccttctgaatgttgtagtcgctcaaagtgcggccgtcttcaagctgc 372 Query: 174 ttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttc 233 ||||||||||||||||| |||||||| || ||||| ||||||| ||||| |||||||| Sbjct: 371 ttgccggcgaaaatgagacgctgctgatcgggaggaatgccctccttgtcttggatcttt 312 Query: 234 gccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtc 293 ||||||||||||||| ||| | || || | ||||| || |||||||||||||| || Sbjct: 311 tgcttgacgttgtcgatagtgtcggacgattccacctcaagggtgatggtcttgccggta 252 Query: 294 agggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggagggtng 353 || | ||||||| || || | ||||||||| | |||||||| || ||||||||||| | Sbjct: 251 agag-tcttgacgaagatttgcataccaccgc-gcaggcggaggacaaggtggagggtag 194 Query: 354 actccttntggatgttg 370 ||||||| ||||||||| Sbjct: 193 actccttctggatgttg 177 Score = 111 bits (56), Expect = 2e-21 Identities = 150/184 (81%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| |||||||||| |||||||||||||| ||| | || |||||||||| ||| | | Sbjct: 206 aggtggagggtagactccttctggatgttgtagtcggaaagggtgcggccatcctccaac 147 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||||||||| ||||| | |||||||||||| || || ||||||| ||||| ||| ||| Sbjct: 146 tgcttgccggcaaaaatcaagcgctgctggtcggggggaatgccctccttgtcctgaatc 87 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || |||||| ||||| ||||| | || |||| |||| || |||||||||||||| Sbjct: 86 ttttgcttgacattgtcaatggtatccgacgactcgacctcgagggtgatggtcttgccg 27 Query: 291 gtca 294 |||| Sbjct: 26 gtca 23 Score = 95.6 bits (48), Expect = 1e-16 Identities = 106/127 (83%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||| ||||||| ||| | || ||||| |||| |||||||||||| || |||||||| Sbjct: 645 cttctgaatgttgtagtcggagagggtgcgaccatcctcgagctgctttccagcgaaaat 586 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| |||||||| || || ||||| |||| ||||| ||||||||| ||| |||||||| Sbjct: 585 gagacgctgctgatcaggtgggataccctccttgtcctggatcttttgctttacgttgtc 526 Query: 248 gatggtg 254 ||||||| Sbjct: 525 gatggtg 519 Score = 60.0 bits (30), Expect = 5e-06 Identities = 168/215 (78%), Gaps = 2/215 (0%) Strand = Plus / Minus Query: 156 cggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccc 215 ||||||| ||| | |||||| || || || || || ||||||||||| || ||||| ||| Sbjct: 845 cggccatcctccaactgcttaccagcaaagatcagacgctgctggtcaggcgggataccc 786 Query: 216 tncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagt 275 | ||||| ||||||||| ||| ||||| || || || | || |||| || | ||| Sbjct: 785 tccttgtcctggatcttttgcttcacgttatcaatcgtatccgaagactcgacttccagc 726 Query: 276 gtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcgga 335 || || ||||||||||||| ||| |||||| || |||| ||||||||||| ||| |||| Sbjct: 725 gtaatcgtcttgcccgtcaaggt-cttgacgaaaatctgcataccaccac-gaagacgga 668 Query: 336 gcaccaggtggagggtngactccttntggatgttg 370 |||||| ||| ||||| |||||| || |||||| Sbjct: 667 gcaccaagtgcagggtgctctccttctgaatgttg 633
>ref|XM_325849.1| Neurospora crassa OR74A hypothetical protein ( (X74405) polyubiquitin [Artemia franciscana] ) (NCU05995.1) partial mRNA Length = 918 Score = 149 bits (75), Expect = 7e-33 Identities = 210/257 (81%), Gaps = 2/257 (0%) Strand = Plus / Minus Query: 114 tgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgc 173 ||||||||||||| |||||| ||||||| ||| | ||||||||| | || |||||| Sbjct: 431 tgaagggtagactccttctgaatgttgtagtcgctcaaagtgcggccgtcttcaagctgc 372 Query: 174 ttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttc 233 ||||||||||||||||| |||||||| || ||||| ||||||| ||||| |||||||| Sbjct: 371 ttgccggcgaaaatgagacgctgctgatcgggaggaatgccctccttgtcttggatcttt 312 Query: 234 gccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtc 293 ||||||||||||||| ||| | || || | ||||| || |||||||||||||| || Sbjct: 311 tgcttgacgttgtcgatagtgtcggacgattccacctcaagggtgatggtcttgccggta 252 Query: 294 agggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggagggtng 353 || | ||||||| || || | ||||||||| | |||||||| || ||||||||||| | Sbjct: 251 agag-tcttgacgaagatttgcataccaccgc-gcaggcggaggacaaggtggagggtag 194 Query: 354 actccttntggatgttg 370 ||||||| ||||||||| Sbjct: 193 actccttctggatgttg 177 Score = 111 bits (56), Expect = 2e-21 Identities = 150/184 (81%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| |||||||||| |||||||||||||| ||| | || |||||||||| ||| | | Sbjct: 206 aggtggagggtagactccttctggatgttgtagtcggaaagggtgcggccatcctccaac 147 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||||||||| ||||| | |||||||||||| || || ||||||| ||||| ||| ||| Sbjct: 146 tgcttgccggcaaaaatcaagcgctgctggtcggggggaatgccctccttgtcctgaatc 87 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || |||||| ||||| ||||| | || |||| |||| || |||||||||||||| Sbjct: 86 ttttgcttgacattgtcaatggtatccgacgactcgacctcgagggtgatggtcttgccg 27 Query: 291 gtca 294 |||| Sbjct: 26 gtca 23 Score = 95.6 bits (48), Expect = 1e-16 Identities = 106/127 (83%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||| ||||||| ||| | || ||||| |||| |||||||||||| || |||||||| Sbjct: 645 cttctgaatgttgtagtcggagagggtgcgaccatcctcgagctgctttccagcgaaaat 586 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| |||||||| || || ||||| |||| ||||| ||||||||| ||| |||||||| Sbjct: 585 gagacgctgctgatcaggtgggataccctccttgtcctggatcttttgctttacgttgtc 526 Query: 248 gatggtg 254 ||||||| Sbjct: 525 gatggtg 519 Score = 60.0 bits (30), Expect = 5e-06 Identities = 168/215 (78%), Gaps = 2/215 (0%) Strand = Plus / Minus Query: 156 cggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccc 215 ||||||| ||| | |||||| || || || || || ||||||||||| || ||||| ||| Sbjct: 845 cggccatcctccaactgcttaccagcaaagatcagacgctgctggtcaggcgggataccc 786 Query: 216 tncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagt 275 | ||||| ||||||||| ||| ||||| || || || | || |||| || | ||| Sbjct: 785 tccttgtcctggatcttttgcttcacgttatcaatcgtatccgaagactcgacttccagc 726 Query: 276 gtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcgga 335 || || ||||||||||||| ||| |||||| || |||| ||||||||||| ||| |||| Sbjct: 725 gtaatcgtcttgcccgtcaaggt-cttgacgaaaatctgcataccaccac-gaagacgga 668 Query: 336 gcaccaggtggagggtngactccttntggatgttg 370 |||||| ||| ||||| |||||| || |||||| Sbjct: 667 gcaccaagtgcagggtgctctccttctgaatgttg 633
>emb|X13140.1|NCUBQ Neurospora crassa ubiquitin gene Length = 2249 Score = 149 bits (75), Expect = 7e-33 Identities = 210/257 (81%), Gaps = 2/257 (0%) Strand = Plus / Minus Query: 114 tgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgc 173 ||||||||||||| |||||| ||||||| ||| | ||||||||| | || |||||| Sbjct: 1295 tgaagggtagactccttctgaatgttgtagtcgctcaaagtgcggccgtcttcaagctgc 1236 Query: 174 ttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttc 233 ||||||||||||||||| |||||||| || ||||| ||||||| ||||| |||||||| Sbjct: 1235 ttgccggcgaaaatgagacgctgctgatcgggaggaatgccctccttgtcttggatcttt 1176 Query: 234 gccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtc 293 ||||||||||||||| ||| | || || | ||||| || |||||||||||||| || Sbjct: 1175 tgcttgacgttgtcgatagtgtcggacgattccacctcaagggtgatggtcttgccggta 1116 Query: 294 agggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggagggtng 353 || | ||||||| || || | ||||||||| | |||||||| || ||||||||||| | Sbjct: 1115 agag-tcttgacgaagatttgcataccaccgc-gcaggcggaggacaaggtggagggtag 1058 Query: 354 actccttntggatgttg 370 ||||||| ||||||||| Sbjct: 1057 actccttctggatgttg 1041 Score = 111 bits (56), Expect = 2e-21 Identities = 150/184 (81%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| |||||||||| |||||||||||||| ||| | || |||||||||| ||| | | Sbjct: 1070 aggtggagggtagactccttctggatgttgtagtcggaaagggtgcggccatcctccaac 1011 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||||||||| ||||| | |||||||||||| || || ||||||| ||||| ||| ||| Sbjct: 1010 tgcttgccggcaaaaatcaagcgctgctggtcggggggaatgccctccttgtcctgaatc 951 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || |||||| ||||| ||||| | || |||| |||| || |||||||||||||| Sbjct: 950 ttttgcttgacattgtcaatggtatccgacgactcgacctcgagggtgatggtcttgccg 891 Query: 291 gtca 294 |||| Sbjct: 890 gtca 887 Score = 95.6 bits (48), Expect = 1e-16 Identities = 106/127 (83%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||| ||||||| ||| | || ||||| |||| |||||||||||| || |||||||| Sbjct: 1509 cttctgaatgttgtagtcggagagggtgcgaccatcctcgagctgctttccagcgaaaat 1450 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| |||||||| || || ||||| |||| ||||| ||||||||| ||| |||||||| Sbjct: 1449 gagacgctgctgatcaggtgggataccctccttgtcctggatcttttgctttacgttgtc 1390 Query: 248 gatggtg 254 ||||||| Sbjct: 1389 gatggtg 1383 Score = 60.0 bits (30), Expect = 5e-06 Identities = 168/215 (78%), Gaps = 2/215 (0%) Strand = Plus / Minus Query: 156 cggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccc 215 ||||||| ||| | |||||| || || || || || ||||||||||| || ||||| ||| Sbjct: 1709 cggccatcctccaactgcttaccagcaaagatcagacgctgctggtcaggcgggataccc 1650 Query: 216 tncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagt 275 | ||||| ||||||||| ||| ||||| || || || | || |||| || | ||| Sbjct: 1649 tccttgtcctggatcttttgcttcacgttatcaatcgtatccgaagactcgacttccagc 1590 Query: 276 gtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcgga 335 || || ||||||||||||| ||| |||||| || |||| ||||||||||| ||| |||| Sbjct: 1589 gtaatcgtcttgcccgtcaaggt-cttgacgaaaatctgcataccaccac-gaagacgga 1532 Query: 336 gcaccaggtggagggtngactccttntggatgttg 370 |||||| ||| ||||| |||||| || |||||| Sbjct: 1531 gcaccaagtgcagggtgctctccttctgaatgttg 1497
>ref|NM_057428.3| Drosophila melanogaster Ribosomal protein L40 CG2960-RA (RpL40), mRNA Length = 660 Score = 149 bits (75), Expect = 7e-33 Identities = 174/210 (82%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 ||||||||||||| |||||| ||| ||||| |||| |||||| ||||||| ||| | Sbjct: 348 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtagtcggac 289 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 ||||||||||||| ||| ||||||||||||||||| || || |||||||| || || || Sbjct: 288 agagtgcggccatcctccagctgcttgccggcgaagatcagacgctgctgatctggggga 229 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||| | ||||||||| |||||||| || ||||||||| |||| | || |||| Sbjct: 228 atgccctccttatcctggatcttagccttgacattctcgatggtgtcagaaggctccacc 169 Query: 270 ttcagtgtgatggtcttgcccgtcagggtt 299 | || |||||||||||||| || |||||| Sbjct: 168 tccaaggtgatggtcttgccggtgagggtt 139 Score = 48.1 bits (24), Expect = 0.020 Identities = 37/42 (88%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||| ||| ||||| |||||||| || |||||| Sbjct: 339 aggcggagcaccaagtgcagggtggactccttctgaatgttg 298
>gb|AY075451.1| Drosophila melanogaster RE10554 full length cDNA Length = 602 Score = 149 bits (75), Expect = 7e-33 Identities = 174/210 (82%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 ||||||||||||| |||||| ||| ||||| |||| |||||| ||||||| ||| | Sbjct: 289 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtagtcggac 230 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 ||||||||||||| ||| ||||||||||||||||| || || |||||||| || || || Sbjct: 229 agagtgcggccatcctccagctgcttgccggcgaagatcagacgctgctgatctggggga 170 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||| | ||||||||| |||||||| || ||||||||| |||| | || |||| Sbjct: 169 atgccctccttatcctggatcttagccttgacattctcgatggtgtcagaaggctccacc 110 Query: 270 ttcagtgtgatggtcttgcccgtcagggtt 299 | || |||||||||||||| || |||||| Sbjct: 109 tccaaggtgatggtcttgccggtgagggtt 80 Score = 48.1 bits (24), Expect = 0.020 Identities = 37/42 (88%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||| ||| ||||| |||||||| || |||||| Sbjct: 280 aggcggagcaccaagtgcagggtggactccttctgaatgttg 239
>gb|AC092217.1|AC092217 Drosophila melanogaster, chromosome 2L, region 24D-24E, BAC clone BACR11D14, complete sequence Length = 158347 Score = 149 bits (75), Expect = 7e-33 Identities = 174/210 (82%) Strand = Plus / Plus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 ||||||||||||| |||||| ||| ||||| |||| |||||| ||||||| ||| | Sbjct: 54634 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtagtcggac 54693 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 ||||||||||||| ||| ||||||||||||||||| || || |||||||| || || || Sbjct: 54694 agagtgcggccatcctccagctgcttgccggcgaagatcagacgctgctgatctggggga 54753 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||| | ||||||||| |||||||| || ||||||||| |||| | || |||| Sbjct: 54754 atgccctccttatcctggatcttagccttgacattctcgatggtgtcagaaggctccacc 54813 Query: 270 ttcagtgtgatggtcttgcccgtcagggtt 299 | || |||||||||||||| || |||||| Sbjct: 54814 tccaaggtgatggtcttgccggtgagggtt 54843 Score = 48.1 bits (24), Expect = 0.020 Identities = 37/42 (88%) Strand = Plus / Plus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||| ||| ||||| |||||||| || |||||| Sbjct: 54643 aggcggagcaccaagtgcagggtggactccttctgaatgttg 54684
>gb|AE003577.4| Drosophila melanogaster chromosome 2L, section 14 of 83 of the complete sequence Length = 290034 Score = 149 bits (75), Expect = 7e-33 Identities = 174/210 (82%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 ||||||||||||| |||||| ||| ||||| |||| |||||| ||||||| ||| | Sbjct: 196973 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtagtcggac 196914 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 ||||||||||||| ||| ||||||||||||||||| || || |||||||| || || || Sbjct: 196913 agagtgcggccatcctccagctgcttgccggcgaagatcagacgctgctgatctggggga 196854 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||| | ||||||||| |||||||| || ||||||||| |||| | || |||| Sbjct: 196853 atgccctccttatcctggatcttagccttgacattctcgatggtgtcagaaggctccacc 196794 Query: 270 ttcagtgtgatggtcttgcccgtcagggtt 299 | || |||||||||||||| || |||||| Sbjct: 196793 tccaaggtgatggtcttgccggtgagggtt 196764 Score = 48.1 bits (24), Expect = 0.020 Identities = 37/42 (88%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||| ||| ||||| |||||||| || |||||| Sbjct: 196964 aggcggagcaccaagtgcagggtggactccttctgaatgttg 196923
>gb|AC004380.1|AC004380 Drosophila melanogaster DNA sequence (P1 DS06843 (D96)), complete sequence Length = 51065 Score = 149 bits (75), Expect = 7e-33 Identities = 174/210 (82%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 ||||||||||||| |||||| ||| ||||| |||| |||||| ||||||| ||| | Sbjct: 21114 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtagtcggac 21055 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 ||||||||||||| ||| ||||||||||||||||| || || |||||||| || || || Sbjct: 21054 agagtgcggccatcctccagctgcttgccggcgaagatcagacgctgctgatctggggga 20995 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||| | ||||||||| |||||||| || ||||||||| |||| | || |||| Sbjct: 20994 atgccctccttatcctggatcttagccttgacattctcgatggtgtcagaaggctccacc 20935 Query: 270 ttcagtgtgatggtcttgcccgtcagggtt 299 | || |||||||||||||| || |||||| Sbjct: 20934 tccaaggtgatggtcttgccggtgagggtt 20905 Score = 48.1 bits (24), Expect = 0.020 Identities = 37/42 (88%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||| ||| ||||| |||||||| || |||||| Sbjct: 21105 aggcggagcaccaagtgcagggtggactccttctgaatgttg 21064
>ref|XM_323905.1| Neurospora crassa OR74A hypothetical protein ( ubiquitin - chicken ) (NCU04553.1) partial mRNA Length = 285 Score = 147 bits (74), Expect = 3e-32 Identities = 173/209 (82%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| |||| | |||| ||||| ||||| || |||||||||||||| ||| | Sbjct: 227 ccaccacggaggcgaagcacgaggtggagggtgctctccttctggatgttgtagtcggag 168 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || |||||||||| ||||||||||||||| ||||| || |||||||||||||| || ||| Sbjct: 167 agggtgcggccatcctcgagctgcttgccagcgaagatcaggcgctgctggtcagggggg 108 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| |||||||||| |||||| |||||||||||| | |||| |||| Sbjct: 107 atgccctccttgtcctggatcttctgcttgacattgtcgatggtgtcgctagactccacc 48 Query: 270 ttcagtgtgatggtcttgcccgtcagggt 298 | || ||||| ||||||||||| ||||| Sbjct: 47 tcaagggtgatagtcttgcccgtgagggt 19 Score = 40.1 bits (20), Expect = 4.9 Identities = 36/42 (85%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||| ||||| ||||||||||| |||||| ||||||||| Sbjct: 218 aggcgaagcacgaggtggagggtgctctccttctggatgttg 177
>ref|XM_950851.1| Neurospora crassa OR74A hypothetical protein ( ubiquitin - chicken ) (NCU04553.1) partial mRNA Length = 285 Score = 147 bits (74), Expect = 3e-32 Identities = 173/209 (82%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| |||| | |||| ||||| ||||| || |||||||||||||| ||| | Sbjct: 227 ccaccacggaggcgaagcacgaggtggagggtgctctccttctggatgttgtagtcggag 168 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || |||||||||| ||||||||||||||| ||||| || |||||||||||||| || ||| Sbjct: 167 agggtgcggccatcctcgagctgcttgccagcgaagatcaggcgctgctggtcagggggg 108 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| |||||||||| |||||| |||||||||||| | |||| |||| Sbjct: 107 atgccctccttgtcctggatcttctgcttgacattgtcgatggtgtcgctagactccacc 48 Query: 270 ttcagtgtgatggtcttgcccgtcagggt 298 | || ||||| ||||||||||| ||||| Sbjct: 47 tcaagggtgatagtcttgcccgtgagggt 19 Score = 40.1 bits (20), Expect = 4.9 Identities = 36/42 (85%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||| ||||| ||||||||||| |||||| ||||||||| Sbjct: 218 aggcgaagcacgaggtggagggtgctctccttctggatgttg 177
>gb|BC019850.1| Mus musculus ubiquitin B, mRNA (cDNA clone MGC:29922 IMAGE:5123849), complete cds Length = 1146 Score = 147 bits (74), Expect = 3e-32 Identities = 229/283 (80%), Gaps = 2/283 (0%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 752 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 693 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 692 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 633 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 632 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 573 Query: 268 ccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacan 327 ||| ||| |||||||||||||| ||||||| |||| || || |||| ||| ||||| | Sbjct: 572 cctccagggtgatggtcttgccagtcaggg-tcttcacgaagatctgcatgccacc-cct 515 Query: 328 aaggcggagcaccaggtggagggtngactccttntggatgttg 370 || ||||| |||||||| ||||| |||||||| ||||||||| Sbjct: 514 cagacggaggaccaggtgcagggttgactccttctggatgttg 472 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 960 accaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggccatcttcc 901 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 900 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 841 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 840 atcttggccttcacattctcgatggtgtcactgggctccacctccagggtgatggtcttg 781 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 780 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 723 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 722 gggttgactccttctggatgttg 700 Score = 121 bits (61), Expect = 2e-24 Identities = 211/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| || | || |||||||||| || Sbjct: 504 accaggtgcagggttgactccttctggatgttgtaatcagagagggtgcggccatcttcc 445 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | |||||||| || |||||||||| || | |||| Sbjct: 444 agctgcttgccggcaaagatcagcctatgctggtcaggggggatgccctctttatcctgg 385 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 384 atcttggccttcacattctcgatggtgtcactgggctccacctccagggtgatggtcttg 325 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | || ||||| |||||||| | Sbjct: 324 ccggtcaggg-tcttcacgaagatctgcatgccacc-cctcagacggaggaccaggtgca 267 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 266 gggttgactctttctggatgttg 244 Score = 109 bits (55), Expect = 6e-21 Identities = 155/191 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | || |||||||||| || Sbjct: 276 accaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggccatcttcc 217 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 216 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 157 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| || |||||||||||| Sbjct: 156 atcttggccttcacgttctcgatggtgtcactgggctccacctctagggtgatggtcttg 97 Query: 288 cccgtcagggt 298 || |||||||| Sbjct: 96 ccggtcagggt 86
>dbj|AK003190.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1100001L13 product:ubiquitin B, full insert sequence Length = 932 Score = 147 bits (74), Expect = 3e-32 Identities = 229/283 (80%), Gaps = 2/283 (0%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 556 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 497 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 496 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 437 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 436 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 377 Query: 268 ccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacan 327 ||| ||| |||||||||||||| ||||||| |||| || || |||| ||| ||||| | Sbjct: 376 cctccagggtgatggtcttgccggtcaggg-tcttcacgaagatctgcatgccacctc-t 319 Query: 328 aaggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||| || |||||||| ||||| |||||||| ||||||||| Sbjct: 318 caggcgaaggaccaggtgcagggttgactccttctggatgttg 276 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 764 accaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggccatcttct 705 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 704 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 645 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 644 atcttggccttcacattctcgatggtgtcactgggctccacctccaaggtgatggtcttg 585 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 584 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 527 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 526 gggttgactccttctggatgttg 504 Score = 119 bits (60), Expect = 7e-24 Identities = 171/211 (81%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 328 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 269 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 268 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 209 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 208 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 149 Query: 268 ccttcagtgtgatggtcttgcccgtcagggt 298 ||| || |||||||||||||| |||||||| Sbjct: 148 cctctagggtgatggtcttgccggtcagggt 118
>emb|X15338.1|NCUBI3 Neurospora crassa UBI 3 mRNA for ubiquitin fusion protein Length = 611 Score = 147 bits (74), Expect = 3e-32 Identities = 173/209 (82%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| |||| | |||| ||||| ||||| || |||||||||||||| ||| | Sbjct: 212 ccaccacggaggcgaagcacgaggtggagggtgctctccttctggatgttgtagtcggag 153 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || |||||||||| ||||||||||||||| ||||| || |||||||||||||| || ||| Sbjct: 152 agggtgcggccatcctcgagctgcttgccagcgaagatcaggcgctgctggtcagggggg 93 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| |||||||||| |||||| |||||||||||| | |||| |||| Sbjct: 92 atgccctccttgtcctggatcttctgcttgacattgtcgatggtgtcgctagactccacc 33 Query: 270 ttcagtgtgatggtcttgcccgtcagggt 298 | || ||||| ||||||||||| ||||| Sbjct: 32 tcaagggtgatagtcttgcccgtgagggt 4 Score = 40.1 bits (20), Expect = 4.9 Identities = 36/42 (85%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||| ||||| ||||||||||| |||||| ||||||||| Sbjct: 203 aggcgaagcacgaggtggagggtgctctccttctggatgttg 162
>gb|U01220.1|U01220 Neurospora crassaA ubiquitin/ribosomal protein S27a fusion protein (ubi/crp-6) gene, complete cds Length = 956 Score = 147 bits (74), Expect = 3e-32 Identities = 173/209 (82%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| |||| | |||| ||||| ||||| || |||||||||||||| ||| | Sbjct: 641 ccaccacggaggcgaagcacgaggtggagggtgctctccttctggatgttgtagtcggag 582 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || |||||||||| ||| ||||||||||||||||| || |||||||||||||| || ||| Sbjct: 581 agggtgcggccatcctcaagctgcttgccggcgaagatcaggcgctgctggtcagggggg 522 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| |||||||||| |||||| |||||||||||| | |||| |||| Sbjct: 521 atgccctccttgtcctggatcttctgcttgacattgtcgatggtgtcgctagactccacc 462 Query: 270 ttcagtgtgatggtcttgcccgtcagggt 298 | || ||||| ||||||||||| ||||| Sbjct: 461 tcaagggtgatagtcttgcccgtgagggt 433 Score = 40.1 bits (20), Expect = 4.9 Identities = 36/42 (85%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||| ||||| ||||||||||| |||||| ||||||||| Sbjct: 632 aggcgaagcacgaggtggagggtgctctccttctggatgttg 591
>gb|U01221.1|NCUBICRP6 Neurospora crassa 74OR23 1A ubiquitin/ribosomal protein S27a fusion protein (ubi/crp-6) mRNA, complete cds Length = 677 Score = 147 bits (74), Expect = 3e-32 Identities = 173/209 (82%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 |||||||| |||| | |||| ||||| ||||| || |||||||||||||| ||| | Sbjct: 269 ccaccacggaggcgaagcacgaggtggagggtgctctccttctggatgttgtagtcggag 210 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 || |||||||||| ||| ||||||||||||||||| || |||||||||||||| || ||| Sbjct: 209 agggtgcggccatcctcaagctgcttgccggcgaagatcaggcgctgctggtcagggggg 150 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| |||||||||| |||||| |||||||||||| | |||| |||| Sbjct: 149 atgccctccttgtcctggatcttctgcttgacattgtcgatggtgtcgctagactccacc 90 Query: 270 ttcagtgtgatggtcttgcccgtcagggt 298 | || ||||| ||||||||||| ||||| Sbjct: 89 tcaagggtgatagtcttgcccgtgagggt 61 Score = 40.1 bits (20), Expect = 4.9 Identities = 36/42 (85%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||| ||||| ||||||||||| |||||| ||||||||| Sbjct: 260 aggcgaagcacgaggtggagggtgctctccttctggatgttg 219
>ref|NM_018955.2| Homo sapiens ubiquitin B (UBB), mRNA Length = 971 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 575 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 516 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 515 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 456 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 455 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 396 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 395 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 338 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 337 gggtcgactccttctggatgttg 315 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || Sbjct: 803 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttcc 744 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || |||||||| | || | ||| Sbjct: 743 agctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttctttatcttgg 684 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 683 atcttggccttcacattttcgatggtgtcactgggctccacctccagagtgatggtcttg 624 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 623 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 566 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 565 gggtcgactccttctggatgttg 543 Score = 103 bits (52), Expect = 4e-19 Identities = 155/192 (80%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||| ||||||| || Sbjct: 347 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 288 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 287 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 228 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 227 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 168 Query: 288 cccgtcagggtt 299 || || |||||| Sbjct: 167 ccggtaagggtt 156
>gb|BC038999.1| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:47606 IMAGE:4943285), complete cds Length = 957 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 544 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 485 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 484 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 425 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 424 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 365 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 364 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 307 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 306 gggtcgactccttctggatgttg 284 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || Sbjct: 772 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttcc 713 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || |||||||| | || | ||| Sbjct: 712 agctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttctttatcttgg 653 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 652 atcttggccttcacattttcgatggtgtcactgggctccacctccagagtgatggtcttg 593 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 592 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 535 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 534 gggtcgactccttctggatgttg 512 Score = 103 bits (52), Expect = 4e-19 Identities = 155/192 (80%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||| ||||||| || Sbjct: 316 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 257 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 256 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 197 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 196 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 137 Query: 288 cccgtcagggtt 299 || || |||||| Sbjct: 136 ccggtaagggtt 125
>gb|BT020104.1| Homo sapiens ubiquitin B mRNA, complete cds Length = 690 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 437 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 378 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 377 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 318 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 317 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 258 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 257 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 200 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 199 gggtcgactccttctggatgttg 177 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || Sbjct: 665 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttcc 606 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || |||||||| | || | ||| Sbjct: 605 agctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttctttatcttgg 546 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 545 atcttggccttcacattttcgatggtgtcactgggctccacctccagagtgatggtcttg 486 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 485 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 428 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 427 gggtcgactccttctggatgttg 405 Score = 103 bits (52), Expect = 4e-19 Identities = 155/192 (80%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||| ||||||| || Sbjct: 209 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 150 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 149 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 90 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 89 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 30 Query: 288 cccgtcagggtt 299 || || |||||| Sbjct: 29 ccggtaagggtt 18
>gb|BC066197.1| Mus musculus ubiquitin B, mRNA (cDNA clone MGC:76690 IMAGE:6435236), complete cds Length = 1214 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || || || |||||||||| || Sbjct: 565 accaggtgcagggttgactctttctggatgttgtaatcagggagggtgcggccatcttcc 506 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 505 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 446 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 445 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 386 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 385 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 328 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 327 gggttgactccttctggatgttg 305 Score = 139 bits (70), Expect = 7e-30 Identities = 228/283 (80%), Gaps = 2/283 (0%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 813 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 754 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 753 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 694 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 693 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 634 Query: 268 ccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacan 327 ||| ||| |||||||||||||| ||||||| |||| || || |||| ||| ||||| | Sbjct: 633 cctccagggtgatggtcttgccagtcaggg-tcttcacgaagatctgcatgccacc-cct 576 Query: 328 aaggcggagcaccaggtggagggtngactccttntggatgttg 370 || ||||| |||||||| ||||| ||||| || ||||||||| Sbjct: 575 cagacggaggaccaggtgcagggttgactctttctggatgttg 533 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 1021 accaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggccatcttct 962 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 961 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 902 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 901 atcttggccttcacattctcgatggtgacactgggctccacctccaaggtgatggtcttg 842 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 841 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 784 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 783 gggttgactccttctggatgttg 761 Score = 119 bits (60), Expect = 7e-24 Identities = 171/211 (81%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 357 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 298 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 297 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 238 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 237 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 178 Query: 268 ccttcagtgtgatggtcttgcccgtcagggt 298 ||| || |||||||||||||| |||||||| Sbjct: 177 cctctagggtgatggtcttgccggtcagggt 147
>gb|BC070919.1| Rattus norvegicus polyubiquitin, mRNA (cDNA clone MGC:91487 IMAGE:7104905), complete cds Length = 1170 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | || |||||||||| || Sbjct: 965 accaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggccatcttcc 906 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || |||||||||| || | |||| Sbjct: 905 agctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctctttatcctgg 846 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 845 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 786 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | |||||||| |||||||| | Sbjct: 785 ccggtcaggg-tcttcacgaagatctgcatgccgcc-cctcaggcggaggaccaggtgca 728 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 727 gggttgactccttctggatgttg 705 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 737 accaggtgcagggttgactccttctggatgttgtagtcagagagggtgcggccatcttcc 678 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || |||||||||| || | |||| Sbjct: 677 agctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctctttatcctgg 618 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| || |||||||||||| Sbjct: 617 atcttggccttcacgttctcgatggtgtcactgggctccacctctagggtgatggtcttg 558 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | |||||||| || ||||| | Sbjct: 557 ccggtcaggg-tcttcacgaagatctgcatgccgcc-cctcaggcggaggacaaggtgca 500 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 499 gggttgactctttctggatgttg 477 Score = 131 bits (66), Expect = 2e-27 Identities = 210/260 (80%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| ||||||||||||| || | || |||||||||| || ||| Sbjct: 506 aggtgcagggttgactctttctggatgttgtaatcagagagggtgcggccatcttccagc 447 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||||||||| || ||||| | ||||||||| || |||||||||| || | ||||||| Sbjct: 446 tgcttgccggcaaagatgagcctctgctggtcaggggggatgccctctttatcctggatc 387 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||||| Sbjct: 386 ttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttgccg 327 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 ||||||| |||| || || |||| ||| || || | |||||||| |||||||| |||| Sbjct: 326 gtcaggg-tcttcacgaagatctgcatgccgcc-cctcaggcggaggaccaggtgcaggg 269 Query: 351 tngactccttntggatgttg 370 | ||||| || ||||||||| Sbjct: 268 ttgactctttctggatgttg 249 Score = 125 bits (63), Expect = 1e-25 Identities = 157/191 (82%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | || |||||||||| || Sbjct: 281 accaggtgcagggttgactctttctggatgttgtagtcagagagggtgcggccatcttcc 222 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || |||||||||| || | |||| Sbjct: 221 agctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctctttatcctgg 162 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| || |||||||||||| Sbjct: 161 atcttggccttcacgttctcgatggtgtcactgggctccacctctagggtgatggtcttg 102 Query: 288 cccgtcagggt 298 || |||||||| Sbjct: 101 ccggtcagggt 91
>gb|BC060312.1| Rattus norvegicus polyubiquitin, mRNA (cDNA clone MGC:72686 IMAGE:6919609), complete cds Length = 1199 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | || |||||||||| || Sbjct: 995 accaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggccatcttcc 936 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || |||||||||| || | |||| Sbjct: 935 agctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctctttatcctgg 876 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 875 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 816 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | |||||||| |||||||| | Sbjct: 815 ccggtcaggg-tcttcacgaagatctgcatgccgcc-cctcaggcggaggaccaggtgca 758 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 757 gggttgactccttctggatgttg 735 Score = 131 bits (66), Expect = 2e-27 Identities = 210/260 (80%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| ||||||||||||| || | || |||||||||| || ||| Sbjct: 536 aggtgcagggttgactctttctggatgttgtaatcagagagggtgcggccatcttccagc 477 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||||||||| || ||||| | ||||||||| || |||||||||| || | ||||||| Sbjct: 476 tgcttgccggcaaagatgagcctctgctggtcaggggggatgccctctttatcctggatc 417 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||||| Sbjct: 416 ttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttgccg 357 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 ||||||| |||| || || |||| ||| || || | |||||||| |||||||| |||| Sbjct: 356 gtcaggg-tcttcacgaagatctgcatgccgcc-cctcaggcggaggaccaggtgcaggg 299 Query: 351 tngactccttntggatgttg 370 | ||||| || ||||||||| Sbjct: 298 ttgactctttctggatgttg 279 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| || | || |||||||||| || Sbjct: 767 accaggtgcagggttgactccttctggatgttgtaatcagagagggtgcggccatcttcc 708 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || |||||||||| || | |||| Sbjct: 707 agctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctctttatcctgg 648 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| || |||||||||||| Sbjct: 647 atcttggccttcacgttctcgatggtgtcactgggctccacctctagggtgatggtcttg 588 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | |||||||| || ||||| | Sbjct: 587 ccggtcaggg-tcttcacgaagatctgcatgccgcc-cctcaggcggaggacaaggtgca 530 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 529 gggttgactctttctggatgttg 507 Score = 125 bits (63), Expect = 1e-25 Identities = 157/191 (82%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | || |||||||||| || Sbjct: 311 accaggtgcagggttgactctttctggatgttgtagtcagagagggtgcggccatcttcc 252 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || |||||||||| || | |||| Sbjct: 251 agctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctctttatcctgg 192 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| || |||||||||||| Sbjct: 191 atcttggccttcacgttctcgatggtgtcactgggctccacctctagggtgatggtcttg 132 Query: 288 cccgtcagggt 298 || |||||||| Sbjct: 131 ccggtcagggt 121
>gb|BC046123.2| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:57581 IMAGE:3879581), complete cds Length = 951 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 523 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 464 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 463 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 404 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 403 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 344 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 343 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 286 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 285 gggtcgactccttctggatgttg 263 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || Sbjct: 751 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttcc 692 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || |||||||| | || | ||| Sbjct: 691 agctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttctttatcttgg 632 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 631 atcttggccttcacattttcgatggtgtcactgggctccacctccagagtgatggtcttg 572 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 571 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 514 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 513 gggtcgactccttctggatgttg 491 Score = 103 bits (52), Expect = 4e-19 Identities = 155/192 (80%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||| ||||||| || Sbjct: 295 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 236 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 235 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 176 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 175 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 116 Query: 288 cccgtcagggtt 299 || || |||||| Sbjct: 115 ccggtaagggtt 104
>gb|BC031027.1| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:32826 IMAGE:4715377), complete cds Length = 919 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 535 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 476 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 475 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 416 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 415 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 356 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 355 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 298 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 297 gggtcgactccttctggatgttg 275 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || Sbjct: 763 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttcc 704 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || |||||||| | || | ||| Sbjct: 703 agctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttctttatcttgg 644 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 643 atcttggccttcacattttcgatggtgtcactgggctccacctccagagtgatggtcttg 584 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 583 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 526 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 525 gggtcgactccttctggatgttg 503 Score = 103 bits (52), Expect = 4e-19 Identities = 155/192 (80%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||| ||||||| || Sbjct: 307 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 248 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 247 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 188 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 187 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 128 Query: 288 cccgtcagggtt 299 || || |||||| Sbjct: 127 ccggtaagggtt 116
>gb|BC000379.2| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:8385 IMAGE:2820408), complete cds Length = 989 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 575 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 516 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 515 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 456 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 455 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 396 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 395 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 338 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 337 gggtcgactccttctggatgttg 315 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || Sbjct: 803 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttcc 744 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || |||||||| | || | ||| Sbjct: 743 agctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttctttatcttgg 684 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 683 atcttggccttcacattttcgatggtgtcactgggctccacctccagagtgatggtcttg 624 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 623 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 566 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 565 gggtcgactccttctggatgttg 543 Score = 95.6 bits (48), Expect = 1e-16 Identities = 154/192 (80%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||| ||||| | || Sbjct: 347 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccgtcttcc 288 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 287 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 228 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 227 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 168 Query: 288 cccgtcagggtt 299 || || |||||| Sbjct: 167 ccggtaagggtt 156
>gb|BC026301.1| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:24729 IMAGE:4280629), complete cds Length = 957 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 533 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 474 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 473 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 414 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 413 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 354 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 353 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 296 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 295 gggtcgactccttctggatgttg 273 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || Sbjct: 761 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttcc 702 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || |||||||| | || | ||| Sbjct: 701 agctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttctttatcttgg 642 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 641 atcttggccttcacattttcgatggtgtcactgggctccacctccagagtgatggtcttg 582 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 581 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 524 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 523 gggtcgactccttctggatgttg 501 Score = 103 bits (52), Expect = 4e-19 Identities = 155/192 (80%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||| ||||||| || Sbjct: 305 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 246 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 245 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 186 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 185 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 126 Query: 288 cccgtcagggtt 299 || || |||||| Sbjct: 125 ccggtaagggtt 114
>gb|AF285161.1| Mus musculus cell-line C3H/He polyubiquitin C (Ubc) gene, complete cds Length = 3756 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 3503 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 3444 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 3443 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 3384 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || ||||| ||| |||||||||||| Sbjct: 3383 atctttgccttgacattctcaatggtgtcactgggctccacctccagggtgatggtcttg 3324 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 3323 cctgtcaggg-tcttcacaaagatctgcatcccacctc-tgaggcgaaggaccaggtgca 3266 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 3265 gggtggactctttctggatgttg 3243 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 3275 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 3216 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 3215 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 3156 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || ||||| ||| |||||||||||| Sbjct: 3155 atctttgccttgacattctcaatggtgtcactgggctccacctccagggtgatggtcttg 3096 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 3095 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 3038 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 3037 gggtggactctttctggatgttg 3015 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 2819 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 2760 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 2759 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 2700 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || ||||| ||| |||||||||||| Sbjct: 2699 atctttgccttgacattctcaatggtgtcactgggctccacctccagggtgatggtcttg 2640 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 2639 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 2582 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 2581 gggtggactctttctggatgttg 2559 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 3047 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 2988 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 2987 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 2928 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 2927 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggtcttg 2868 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 2867 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 2810 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 2809 gggtggactctttctggatgttg 2787 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 2591 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 2532 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 2531 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 2472 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 2471 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 2412 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||||| || || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 2411 cctgtcagggtt-ttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 2354 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 2353 gggtggactctttctggatgttg 2331 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1907 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1848 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1847 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1788 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1787 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggtcttg 1728 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1727 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 1670 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 1669 gggtggactctttctggatgttg 1647 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 2363 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 2304 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || | |||||||| ||||| |||| Sbjct: 2303 agctgcttgcctgcaaagatcagcctctgctggtcaggggagatgccctccttgtcctgg 2244 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 2243 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 2184 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 2183 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 2126 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 2125 gggtggactctttctggatgttg 2103 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 2135 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 2076 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 2075 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 2016 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || || ||| || || || |||| ||| |||||||||||| Sbjct: 2015 atctttgccttgacattctctatagtgtcactgggctcgacctccagggtgatggtcttg 1956 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1955 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 1898 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 1897 gggtggactctttctggatgttg 1875 Score = 109 bits (55), Expect = 6e-21 Identities = 146/179 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1679 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1620 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1619 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1560 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 1559 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggtctt 1501 Score = 50.1 bits (25), Expect = 0.005 Identities = 78/95 (82%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 276 gtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcgga 335 |||||||||||||| ||||||| |||| || || |||| ||| ||||| | ||||| | Sbjct: 3563 gtgatggtcttgcctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaa 3506 Query: 336 gcaccaggtggagggtngactccttntggatgttg 370 | |||||||| ||||| ||||| || ||||||||| Sbjct: 3505 ggaccaggtgcagggtggactctttctggatgttg 3471
>ref|XR_004580.1| PREDICTED: Mus musculus gene model 1821, (NCBI) (Gm1821), misc RNA Length = 746 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 540 accaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggccatcttct 481 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 480 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 421 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 420 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 361 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | || ||||| |||||||| | Sbjct: 360 ccggtcaggg-tcttcacgaagatctgcatgccacc-cctcagacggaggaccaggtgca 303 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 302 gggttgactccttctggatgttg 280 Score = 117 bits (59), Expect = 3e-23 Identities = 156/191 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| || | || |||||||||| || Sbjct: 312 accaggtgcagggttgactccttctggatgttgtaatcagagagggtgcggccatcttcc 253 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 252 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 193 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| || |||||||||||| Sbjct: 192 atcttggccttcacgttctcgatggtgtcactgggctccacctctagggtgatggtcttg 133 Query: 288 cccgtcagggt 298 || |||||||| Sbjct: 132 ccggtcagggt 122
>gb|BC062397.1| Rattus norvegicus cDNA clone IMAGE:5623273, **** WARNING: chimeric clone **** Length = 3040 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 2766 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 2707 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 2706 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 2647 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 2646 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 2587 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 2586 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 2529 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 2528 gggtggactccttctggatgttg 2506 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 2538 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 2479 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 2478 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 2419 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 2418 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 2359 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 2358 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgcaggaccaggtgca 2301 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 2300 gggtggactccttctggatgttg 2278 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 1626 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 1567 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1566 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1507 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1506 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 1447 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 1446 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 1389 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 1388 gggtggactccttctggatgttg 1366 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| | ||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 2082 accaggtgcaaggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 2023 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 2022 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1963 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1962 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 1903 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 1902 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgcaggaccaggtgca 1845 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 1844 gggtggactccttctggatgttg 1822 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 1854 accaggtgcagggtggactccttctggatgttgtagtcagacagggtgcggccatcttcc 1795 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1794 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1735 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1734 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 1675 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 1674 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 1617 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 1616 gggtggactccttctggatgttg 1594 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| | ||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 942 accaggtgcaaggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 883 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 882 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 823 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 822 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 763 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 762 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 705 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 704 gggtggactccttctggatgttg 682 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| |||| || |||||||||| || Sbjct: 714 accaggtgcagggtggactccttctggatgttgtaatctgacagggtgcggccatcttcc 655 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 654 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 595 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 594 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 535 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 534 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 477 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 476 gggtggactccttctggatgttg 454 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 486 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 427 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 426 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 367 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 366 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 307 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 306 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 249 Query: 348 gggtngactccttntggatgttg 370 ||| |||||||| ||||||||| Sbjct: 248 aggtggactccttctggatgttg 226 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 2310 accaggtgcagggtggactccttctggatgttgtagtcagacagggtgcggccatcttcc 2251 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 2250 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 2191 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 2190 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 2131 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 2130 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 2073 Query: 348 gggtngactccttntggatgttg 370 ||| |||||||| ||||||||| Sbjct: 2072 aggtggactccttctggatgttg 2050 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| |||| || |||||||||| || Sbjct: 1398 accaggtgcagggtggactccttctggatgttgtaatctgacagggtgcggccatcttcc 1339 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1338 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1279 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1278 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 1219 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 1218 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 1161 Query: 348 gggtngactccttntggatgttg 370 ||| |||||||| ||||||||| Sbjct: 1160 aggtggactccttctggatgttg 1138 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| | ||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 1170 accaggtgcaaggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 1111 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1110 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1051 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1050 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 991 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 990 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 933 Query: 348 gggtngactccttntggatgttg 370 ||| |||||||| ||||||||| Sbjct: 932 aggtggactccttctggatgttg 910 Score = 109 bits (55), Expect = 6e-21 Identities = 146/179 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| | ||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 258 accaggtgcaaggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 199 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 198 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 139 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 138 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtctt 80
>gb|BC021067.1| Homo sapiens cDNA clone IMAGE:3510175, **** WARNING: chimeric clone **** Length = 4562 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 4148 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 4089 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 4088 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 4029 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 4028 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 3969 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 3968 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 3911 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 3910 gggtcgactccttctggatgttg 3888 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || Sbjct: 4376 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttcc 4317 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || |||||||| | || | ||| Sbjct: 4316 agctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttctttatcttgg 4257 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 4256 atcttggccttcacattttcgatggtgtcactgggctccacctccagagtgatggtcttg 4197 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 4196 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 4139 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 4138 gggtcgactccttctggatgttg 4116 Score = 103 bits (52), Expect = 4e-19 Identities = 155/192 (80%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||| ||||||| || Sbjct: 3920 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 3861 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 3860 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 3801 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 3800 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 3741 Query: 288 cccgtcagggtt 299 || || |||||| Sbjct: 3740 ccggtaagggtt 3729
>emb|X73119.1|LTLTUBEPA L.tarentolae LtUB-EP52 (A) gene for ubiquitin-fusion protein Length = 823 Score = 145 bits (73), Expect = 1e-31 Identities = 138/162 (85%) Strand = Plus / Minus Query: 89 gccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctgg 148 |||||| ||||||| |||||||||| || || |||| |||||||||||||| ||| | Sbjct: 462 gccaccgcgcaggcgcagcaccaggtgcagcgtggactccttctggatgttgtagtccga 403 Query: 149 nagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggagg 208 ||||||||||| | ||| ||||||||||| ||||| || ||||||||||||||||| || Sbjct: 402 gagagtgcggccctcctccagctgcttgccagcgaagatcaggcgctgctggtccggcgg 343 Query: 209 gatgccctncttgtnctggatcttcgccttgacgttgtcgat 250 |||||||| ||||| ||||||||| ||||| ||||| ||||| Sbjct: 342 gatgccctccttgtcctggatcttggccttcacgttttcgat 301 Score = 48.1 bits (24), Expect = 0.020 Identities = 37/42 (88%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||| ||||||||||| || || |||||||| ||||||||| Sbjct: 452 aggcgcagcaccaggtgcagcgtggactccttctggatgttg 411
>emb|CR620731.1| full-length cDNA clone CS0DF038YI22 of Fetal brain of Homo sapiens (human) Length = 940 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 549 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 490 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 489 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 430 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 429 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 370 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 369 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 312 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 311 gggtcgactccttctggatgttg 289 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || Sbjct: 777 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttcc 718 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || |||||||| | || | ||| Sbjct: 717 agctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttctttatcttgg 658 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 657 atcttggccttcacattttcgatggtgtcactgggctccacctccagagtgatggtcttg 598 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 597 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 540 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 539 gggtcgactccttctggatgttg 517 Score = 103 bits (52), Expect = 4e-19 Identities = 155/192 (80%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||| ||||||| || Sbjct: 321 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 262 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 261 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 202 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 201 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 142 Query: 288 cccgtcagggtt 299 || || |||||| Sbjct: 141 ccggtaagggtt 130
>emb|CR607481.1| full-length cDNA clone CS0DN001YF11 of Adult brain of Homo sapiens (human) Length = 917 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 523 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 464 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 463 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 404 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 403 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 344 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 343 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 286 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 285 gggtcgactccttctggatgttg 263 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || Sbjct: 751 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttcc 692 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || |||||||| | || | ||| Sbjct: 691 agctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttctttatcttgg 632 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 631 atcttggccttcacattttcgatggtgtcactgggctccacctccagagtgatggtcttg 572 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 571 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 514 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 513 gggtcgactccttctggatgttg 491 Score = 103 bits (52), Expect = 4e-19 Identities = 155/192 (80%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||| ||||||| || Sbjct: 295 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 236 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 235 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 176 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 175 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 116 Query: 288 cccgtcagggtt 299 || || |||||| Sbjct: 115 ccggtaagggtt 104
>emb|CR589965.1| full-length cDNA clone CS0DF011YA08 of Fetal brain of Homo sapiens (human) Length = 908 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 515 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 456 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 455 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 396 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 395 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 336 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 335 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 278 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 277 gggtcgactccttctggatgttg 255 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || Sbjct: 743 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttcc 684 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || |||||||| | || | ||| Sbjct: 683 agctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttctttatcttgg 624 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 623 atcttggccttcacattttcgatggtgtcactgggctccacctccagagtgatggtcttg 564 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 563 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 506 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 505 gggtcgactccttctggatgttg 483 Score = 103 bits (52), Expect = 4e-19 Identities = 155/192 (80%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||| ||||||| || Sbjct: 287 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 228 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 227 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 168 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 167 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 108 Query: 288 cccgtcagggtt 299 || || |||||| Sbjct: 107 ccggtaagggtt 96
>gb|AC093484.2| Homo sapiens chromosome , clone RP11-138I1, complete sequence Length = 170944 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 103133 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 103074 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 103073 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 103014 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 103013 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 102954 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 102953 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 102896 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 102895 gggtcgactccttctggatgttg 102873 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || Sbjct: 103361 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttcc 103302 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || |||||||| | || | ||| Sbjct: 103301 agctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttctttatcttgg 103242 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 103241 atcttggccttcacattttcgatggtgtcactgggctccacctccagagtgatggtcttg 103182 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 103181 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 103124 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 103123 gggtcgactccttctggatgttg 103101 Score = 103 bits (52), Expect = 4e-19 Identities = 155/192 (80%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||| ||||||| || Sbjct: 102905 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 102846 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 102845 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 102786 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 102785 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 102726 Query: 288 cccgtcagggtt 299 || || |||||| Sbjct: 102725 ccggtaagggtt 102714
>ref|NM_017314.1| Rattus norvegicus ubiquitin C (Ubc), mRNA Length = 2545 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 2294 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 2235 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 2234 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 2175 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 2174 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 2115 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 2114 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgcaggaccaggtgca 2057 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 2056 gggtggactccttctggatgttg 2034 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 2066 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 2007 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 2006 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1947 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1946 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 1887 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 1886 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgcaggaccaggtgca 1829 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 1828 gggtggactccttctggatgttg 1806 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 1838 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 1779 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1778 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1719 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1718 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 1659 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 1658 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 1601 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 1600 gggtggactccttctggatgttg 1578 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 1610 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 1551 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1550 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1491 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1490 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 1431 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 1430 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 1373 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 1372 gggtggactccttctggatgttg 1350 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 1382 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 1323 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1322 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1263 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1262 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 1203 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 1202 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 1145 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 1144 gggtggactccttctggatgttg 1122 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 1154 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 1095 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1094 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1035 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1034 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 975 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 974 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgcaggaccaggtgca 917 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 916 gggtggactccttctggatgttg 894 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 926 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 867 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 866 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 807 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 806 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 747 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 746 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 689 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 688 gggtggactccttctggatgttg 666 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 698 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 639 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 638 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 579 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 578 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 519 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 518 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 461 Query: 348 gggtngactccttntggatgttg 370 ||| |||||||| ||||||||| Sbjct: 460 aggtggactccttctggatgttg 438 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| | ||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 470 accaggtgcaaggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 411 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 410 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 351 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 350 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 291 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 290 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgcaggaccaggtgca 233 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 232 gggtggactccttctggatgttg 210 Score = 117 bits (59), Expect = 3e-23 Identities = 147/179 (82%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 242 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 183 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 182 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 123 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 122 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtctt 64 Score = 52.0 bits (26), Expect = 0.001 Identities = 85/104 (81%), Gaps = 2/104 (1%) Strand = Plus / Minus Query: 267 accttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccaca 326 |||| ||| |||||||||||||| ||||||| |||| || || |||| ||| || || | Sbjct: 2363 acctccagagtgatggtcttgcctgtcaggg-tcttcacaaagatctgcatgccccctc- 2306 Query: 327 naaggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||| || |||||||| ||||| |||||||| ||||||||| Sbjct: 2305 tgaggcgcaggaccaggtgcagggtggactccttctggatgttg 2262
>dbj|AB210844.1| Lemna paucicostata LpUBQ mRNA for ubiquitin, partial cds Length = 227 Score = 145 bits (73), Expect = 1e-31 Identities = 161/193 (83%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| || || |||| |||||||||||||| || | || || || || | || Sbjct: 211 gcaccaggtggagagtggactccttctggatgttgtaatcggagagggttcgtccgtcct 152 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 |||| ||||| ||||||||||| ||||||||||||||||| |||||||| | ||||| || Sbjct: 151 cgagttgcttaccggcgaaaattaggcgctgctggtccggcgggatgccttccttgtcct 92 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| || |||||||||||| | ||||||| |||| || |||||||||| Sbjct: 91 ggatcttggccttcacattgtcgatggtgtcggaggactcgacctcgagcgtgatggtct 32 Query: 286 tgcccgtcagggt 298 | ||||||||||| Sbjct: 31 tccccgtcagggt 19 Score = 56.0 bits (28), Expect = 8e-05 Identities = 38/42 (90%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||| |||||||||||||| || |||||||| ||||||||| Sbjct: 218 aggcgaagcaccaggtggagagtggactccttctggatgttg 177
>dbj|AB071067.1| Macaca fascicularis testis cDNA clone:QtsA-16192, similar to human ubiquitin B precursor ( UBB ), mRNA, NM_018955.1 Length = 883 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 701 accaggtgcagggttgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 642 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || |||||||| | || | ||| Sbjct: 641 agctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttctttatcttgg 582 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 581 atcttggccttcacattttcgatggtgtcactgggctccacctccagggtgatggtcttg 522 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||||| || || || |||| ||||||||| | ||||| || |||||||| | Sbjct: 521 ccggtcagggtt-ttcacgaagatctgcataccacctc-tcaggcgcaggaccaggtgca 464 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 463 gggtcgactccttctggatgttg 441 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 473 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 414 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 413 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 354 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 353 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 294 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | ||||| || || ||||| | Sbjct: 293 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcaggcgcaggacaaggtgca 236 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 235 gggtcgactctttctggatgttg 213 Score = 95.6 bits (48), Expect = 1e-16 Identities = 151/188 (80%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || ||| Sbjct: 242 aggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttccagc 183 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| || || ||||| | ||||||||| || || ||||| | ||| | |||||| Sbjct: 182 tgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctggatt 123 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| || || ||||||||| || || || ||||| || |||||||||||||| Sbjct: 122 ttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttgccg 63 Query: 291 gtcagggt 298 |||||||| Sbjct: 62 gtcagggt 55
>ref|NM_174133.2| Bos taurus polyubiquitin (LOC281370), mRNA Length = 1144 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 751 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 692 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 691 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 632 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 631 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 572 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || ||||| |||||||| | Sbjct: 571 ccggtcaggg-tcttcacgaagatctgcataccacc-cctcagacggaggaccaggtgca 514 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 513 gggtcgactctttctggatgttg 491 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 979 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 920 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 919 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 860 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 859 atcttggccttcacgttctcgatggtgtcactgggctccacttccagggtgatggtcttg 800 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || ||||| |||||||| | Sbjct: 799 ccggtcaggg-tcttcacgaagatctgcataccacc-cctcagacggaggaccaggtgca 742 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 741 gggtcgactctttctggatgttg 719 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || ||||||||||||| || Sbjct: 523 accaggtgcagggtcgactctttctggatgttgtaatcaaaaagagtgcggccatcttcc 464 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||||| ||| | |||| Sbjct: 463 agctgcttgccggcaaagatgagcctctgctggtcggggggaatgccctccttatcctgg 404 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 403 atcttggccttcacgttctcgatggtgtcactgggctccacttccagggtgatggtcttg 344 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || ||||| |||||||| | Sbjct: 343 ccggtcaggg-tcttcacgaaaatctgcataccacc-cctcagacggaggaccaggtgca 286 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 285 gggtcgactctttctggatgttg 263 Score = 127 bits (64), Expect = 3e-26 Identities = 158/192 (82%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 295 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 236 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 235 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 176 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 175 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 116 Query: 288 cccgtcagggtt 299 || ||||||||| Sbjct: 115 ccggtcagggtt 104
>ref|XM_579409.1| PREDICTED: Rattus norvegicus hypothetical gene supported by NM_017314 (LOC497684), mRNA Length = 2545 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 2294 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 2235 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 2234 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 2175 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 2174 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 2115 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 2114 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 2057 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 2056 gggtggactccttctggatgttg 2034 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 2066 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 2007 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 2006 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1947 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1946 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 1887 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 1886 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgcaggaccaggtgca 1829 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 1828 gggtggactccttctggatgttg 1806 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 1154 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 1095 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1094 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1035 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1034 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 975 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 974 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 917 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 916 gggtggactccttctggatgttg 894 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| | ||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 1610 accaggtgcaaggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 1551 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1550 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1491 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1490 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 1431 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 1430 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgcaggaccaggtgca 1373 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 1372 gggtggactccttctggatgttg 1350 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 1382 accaggtgcagggtggactccttctggatgttgtagtcagacagggtgcggccatcttcc 1323 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1322 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1263 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1262 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 1203 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 1202 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 1145 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 1144 gggtggactccttctggatgttg 1122 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| | ||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 470 accaggtgcaaggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 411 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 410 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 351 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 350 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 291 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 290 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 233 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 232 gggtggactccttctggatgttg 210 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 1838 accaggtgcagggtggactccttctggatgttgtagtcagacagggtgcggccatcttcc 1779 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1778 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1719 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1718 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 1659 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 1658 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 1601 Query: 348 gggtngactccttntggatgttg 370 ||| |||||||| ||||||||| Sbjct: 1600 aggtggactccttctggatgttg 1578 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| |||| || |||||||||| || Sbjct: 926 accaggtgcagggtggactccttctggatgttgtaatctgacagggtgcggccatcttcc 867 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 866 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 807 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 806 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 747 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 746 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 689 Query: 348 gggtngactccttntggatgttg 370 ||| |||||||| ||||||||| Sbjct: 688 aggtggactccttctggatgttg 666 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| | ||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 698 accaggtgcaaggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 639 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 638 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 579 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 578 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 519 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 518 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 461 Query: 348 gggtngactccttntggatgttg 370 ||| |||||||| ||||||||| Sbjct: 460 aggtggactccttctggatgttg 438 Score = 109 bits (55), Expect = 6e-21 Identities = 146/179 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| |||| || |||||||||| || Sbjct: 242 accaggtgcagggtggactccttctggatgttgtaatctgacagggtgcggccatcttcc 183 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 182 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 123 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 122 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtctt 64
>gb|AY891423.1| Synthetic construct Homo sapiens clone FLH017070.01L ubiquitin B (UBB) mRNA, partial cds Length = 690 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 437 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 378 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 377 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 318 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 317 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 258 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 257 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 200 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 199 gggtcgactccttctggatgttg 177 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || Sbjct: 665 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttcc 606 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || |||||||| | || | ||| Sbjct: 605 agctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttctttatcttgg 546 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 545 atcttggccttcacattttcgatggtgtcactgggctccacctccagagtgatggtcttg 486 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 485 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 428 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 427 gggtcgactccttctggatgttg 405 Score = 95.6 bits (48), Expect = 1e-16 Identities = 154/192 (80%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||| ||||| | || Sbjct: 209 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccgtcttcc 150 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 149 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 90 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 89 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 30 Query: 288 cccgtcagggtt 299 || || |||||| Sbjct: 29 ccggtaagggtt 18
>gb|AY888785.1| Synthetic construct Homo sapiens clone FLH017074.01X ubiquitin B (UBB) mRNA, complete cds Length = 690 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 437 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 378 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 377 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 318 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 317 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 258 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 257 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 200 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 199 gggtcgactccttctggatgttg 177 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || Sbjct: 665 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttcc 606 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || |||||||| | || | ||| Sbjct: 605 agctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttctttatcttgg 546 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 545 atcttggccttcacattttcgatggtgtcactgggctccacctccagagtgatggtcttg 486 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 485 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 428 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 427 gggtcgactccttctggatgttg 405 Score = 95.6 bits (48), Expect = 1e-16 Identities = 154/192 (80%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||| ||||| | || Sbjct: 209 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccgtcttcc 150 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 149 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 90 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 89 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 30 Query: 288 cccgtcagggtt 299 || || |||||| Sbjct: 29 ccggtaagggtt 18
>gb|AY888190.1| Synthetic construct Homo sapiens clone FLH021788.01X ubiquitin B (UBB) mRNA, complete cds Length = 690 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 437 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 378 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 377 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 318 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 317 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 258 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 257 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 200 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 199 gggtcgactccttctggatgttg 177 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || Sbjct: 665 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttcc 606 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || |||||||| | || | ||| Sbjct: 605 agctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttctttatcttgg 546 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 545 atcttggccttcacattttcgatggtgtcactgggctccacctccagagtgatggtcttg 486 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 485 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 428 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 427 gggtcgactccttctggatgttg 405 Score = 103 bits (52), Expect = 4e-19 Identities = 155/192 (80%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||| ||||||| || Sbjct: 209 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 150 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 149 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 90 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 89 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 30 Query: 288 cccgtcagggtt 299 || || |||||| Sbjct: 29 ccggtaagggtt 18
>dbj|AB089620.1| Gorilla gorilla UbB gene for polyubiquitin B, complete cds Length = 690 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 437 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 378 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 377 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 318 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 317 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 258 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 257 ccagtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 200 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 199 gggtcgactccttctggatgttg 177 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || Sbjct: 665 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttcc 606 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | ||| Sbjct: 605 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcttgg 546 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 545 atcttggccttcacattttcgatggtgtcactgggctccacctccagagtgatggtcttg 486 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 485 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 428 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 427 gggtcgactccttctggatgttg 405 Score = 111 bits (56), Expect = 2e-21 Identities = 156/192 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 209 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 150 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 149 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 90 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 89 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 30 Query: 288 cccgtcagggtt 299 || || |||||| Sbjct: 29 ccggtaagggtt 18
>dbj|AB089617.1| Homo sapiens UbB gene for polyubiquitin B, complete cds Length = 690 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 437 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 378 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 377 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 318 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 317 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 258 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 257 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 200 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 199 gggtcgactccttctggatgttg 177 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || Sbjct: 665 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttcc 606 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || |||||||| | || | ||| Sbjct: 605 agctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttctttatcttgg 546 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 545 atcttggccttcacattttcgatggtgtcactgggctccacctccagagtgatggtcttg 486 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 485 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 428 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 427 gggtcgactccttctggatgttg 405 Score = 103 bits (52), Expect = 4e-19 Identities = 155/192 (80%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||| ||||||| || Sbjct: 209 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 150 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 149 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 90 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 89 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 30 Query: 288 cccgtcagggtt 299 || || |||||| Sbjct: 29 ccggtaagggtt 18
>dbj|AK129498.1| Homo sapiens cDNA FLJ25987 fis, clone CBR05488, highly similar to Homo sapiens ubiquitin B (UBB) Length = 928 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 533 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 474 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 473 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 414 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 413 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 354 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 353 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 296 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 295 gggtcgactccttctggatgttg 273 Score = 121 bits (61), Expect = 2e-24 Identities = 211/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || Sbjct: 761 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttcc 702 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || |||||||| | || | ||| Sbjct: 701 agctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttctttatcttgg 642 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||| | ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 641 atcatggccttcacattttcgatggtgtcactgggctccacctccagagtgatggtcttg 582 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 581 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 524 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 523 gggtcgactccttctggatgttg 501 Score = 103 bits (52), Expect = 4e-19 Identities = 155/192 (80%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||| ||||||| || Sbjct: 305 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 246 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 245 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 186 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 185 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 126 Query: 288 cccgtcagggtt 299 || || |||||| Sbjct: 125 ccggtaagggtt 114
>gb|BC015127.1| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:24232 IMAGE:3929901), complete cds Length = 965 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 537 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 478 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 477 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 418 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 417 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 358 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 357 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 300 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 299 gggtcgactccttctggatgttg 277 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || Sbjct: 765 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttcc 706 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || |||||||| | || | ||| Sbjct: 705 agctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttctttatcttgg 646 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 645 atcttggccttcacattttcgatggtgtcactgggctccacctccagagtgatggtcttg 586 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 585 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 528 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 527 gggtcgactccttctggatgttg 505 Score = 103 bits (52), Expect = 4e-19 Identities = 155/192 (80%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||| ||||||| || Sbjct: 309 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 250 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 249 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 190 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 189 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 130 Query: 288 cccgtcagggtt 299 || || |||||| Sbjct: 129 ccggtaagggtt 118
>gb|BC009301.2| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:16688 IMAGE:4126622), complete cds Length = 943 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 521 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 462 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 461 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 402 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 401 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 342 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 341 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 284 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 283 gggtcgactccttctggatgttg 261 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || Sbjct: 749 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttcc 690 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || |||||||| | || | ||| Sbjct: 689 agctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttctttatcttgg 630 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 629 atcttggccttcacattttcgatggtgtcactgggctccacctccagagtgatggtcttg 570 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 569 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 512 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 511 gggtcgactccttctggatgttg 489 Score = 103 bits (52), Expect = 4e-19 Identities = 155/192 (80%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||| ||||||| || Sbjct: 293 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 234 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 233 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 174 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 173 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 114 Query: 288 cccgtcagggtt 299 || || |||||| Sbjct: 113 ccggtaagggtt 102
>gb|BC089218.1| Rattus norvegicus ubiquitin C, mRNA (cDNA clone IMAGE:7312282), partial cds Length = 2083 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 1800 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 1741 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1740 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1681 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1680 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 1621 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 1620 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 1563 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 1562 gggtggactccttctggatgttg 1540 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 1572 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 1513 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1512 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1453 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1452 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 1393 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 1392 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgcaggaccaggtgca 1335 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 1334 gggtggactccttctggatgttg 1312 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 660 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 601 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 600 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 541 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 540 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 481 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 480 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 423 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 422 gggtggactccttctggatgttg 400 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| | ||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 1116 accaggtgcaaggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 1057 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1056 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 997 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 996 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 937 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 936 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgcaggaccaggtgca 879 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 878 gggtggactccttctggatgttg 856 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 888 accaggtgcagggtggactccttctggatgttgtagtcagacagggtgcggccatcttcc 829 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 828 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 769 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 768 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 709 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 708 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 651 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 650 gggtggactccttctggatgttg 628 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | || |||||||||| || Sbjct: 1344 accaggtgcagggtggactccttctggatgttgtagtcagacagggtgcggccatcttcc 1285 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1284 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1225 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1224 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 1165 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 1164 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 1107 Query: 348 gggtngactccttntggatgttg 370 ||| |||||||| ||||||||| Sbjct: 1106 aggtggactccttctggatgttg 1084 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| |||| || |||||||||| || Sbjct: 432 accaggtgcagggtggactccttctggatgttgtaatctgacagggtgcggccatcttcc 373 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 372 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 313 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 312 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 253 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 252 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 195 Query: 348 gggtngactccttntggatgttg 370 ||| |||||||| ||||||||| Sbjct: 194 aggtggactccttctggatgttg 172 Score = 125 bits (63), Expect = 1e-25 Identities = 157/191 (82%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| | ||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 204 accaggtgcaaggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 145 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 144 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 85 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 84 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 25 Query: 288 cccgtcagggt 298 || |||||||| Sbjct: 24 cctgtcagggt 14
>dbj|AB099083.1| Bos taurus mRNA for similar to polyubiquitin, partial cds, clone: ORCS13778 Length = 567 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 515 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 456 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||||| ||| | |||| Sbjct: 455 agctgcttgccggcaaagatgagcctctgctggtcggggggaatgccctccttatcctgg 396 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 395 atcttggccttcacgttctcgatggtgtcactgggctccacttccagggtgatggtcttg 336 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || ||||| |||||||| | Sbjct: 335 ccggtcaggg-tcttcacgaaaatctgcataccacc-cctcagacggaggaccaggtgca 278 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 277 gggtcgactctttctggatgttg 255 Score = 127 bits (64), Expect = 3e-26 Identities = 158/192 (82%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 287 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 228 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 227 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 168 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 167 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 108 Query: 288 cccgtcagggtt 299 || ||||||||| Sbjct: 107 ccggtcagggtt 96
>ref|NM_138895.1| Rattus norvegicus polyubiquitin (Ubb), mRNA Length = 1115 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | || |||||||||| || Sbjct: 956 accaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggccatcttcc 897 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || |||||||||| || | |||| Sbjct: 896 agctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctctttatcctgg 837 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 836 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 777 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | |||||||| |||||||| | Sbjct: 776 ccggtcaggg-tcttcacgaagatctgcatgccgcc-cctcaggcggaggaccaggtgca 719 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 718 gggttgactccttctggatgttg 696 Score = 131 bits (66), Expect = 2e-27 Identities = 210/260 (80%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| ||||||||||||| || | || |||||||||| || ||| Sbjct: 497 aggtgcagggttgactctttctggatgttgtaatcagagagggtgcggccatcttccagc 438 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||||||||| || ||||| | ||||||||| || |||||||||| || | ||||||| Sbjct: 437 tgcttgccggcaaagatgagcctctgctggtcaggggggatgccctctttatcctggatc 378 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||||| Sbjct: 377 ttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttgccg 318 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 ||||||| |||| || || |||| ||| || || | |||||||| |||||||| |||| Sbjct: 317 gtcaggg-tcttcacgaagatctgcatgccgcc-cctcaggcggaggaccaggtgcaggg 260 Query: 351 tngactccttntggatgttg 370 | ||||| || ||||||||| Sbjct: 259 ttgactctttctggatgttg 240 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| || | || |||||||||| || Sbjct: 728 accaggtgcagggttgactccttctggatgttgtaatcagagagggtgcggccatcttcc 669 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || |||||||||| || | |||| Sbjct: 668 agctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctctttatcctgg 609 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| || |||||||||||| Sbjct: 608 atcttggccttcacgttctcgatggtgtcactgggctccacctctagggtgatggtcttg 549 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | |||||||| || ||||| | Sbjct: 548 ccggtcaggg-tcttcacgaagatctgcatgccgcc-cctcaggcggaggacaaggtgca 491 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 490 gggttgactctttctggatgttg 468 Score = 125 bits (63), Expect = 1e-25 Identities = 157/191 (82%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | || |||||||||| || Sbjct: 272 accaggtgcagggttgactctttctggatgttgtagtcagagagggtgcggccatcttcc 213 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || |||||||||| || | |||| Sbjct: 212 agctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctctttatcctgg 153 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| || |||||||||||| Sbjct: 152 atcttggccttcacgttctcgatggtgtcactgggctccacctctagggtgatggtcttg 93 Query: 288 cccgtcagggt 298 || |||||||| Sbjct: 92 ccggtcagggt 82
>dbj|D16554.1|RATPOLYU Rattus norvegicus mRNA for polyubiquitin, complete cds, four repetitive ubiquitins in tandem Length = 1115 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | || |||||||||| || Sbjct: 956 accaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggccatcttcc 897 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || |||||||||| || | |||| Sbjct: 896 agctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctctttatcctgg 837 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 836 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 777 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | |||||||| |||||||| | Sbjct: 776 ccggtcaggg-tcttcacgaagatctgcatgccgcc-cctcaggcggaggaccaggtgca 719 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 718 gggttgactccttctggatgttg 696 Score = 131 bits (66), Expect = 2e-27 Identities = 210/260 (80%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| ||||||||||||| || | || |||||||||| || ||| Sbjct: 497 aggtgcagggttgactctttctggatgttgtaatcagagagggtgcggccatcttccagc 438 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||||||||| || ||||| | ||||||||| || |||||||||| || | ||||||| Sbjct: 437 tgcttgccggcaaagatgagcctctgctggtcaggggggatgccctctttatcctggatc 378 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||||| Sbjct: 377 ttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttgccg 318 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 ||||||| |||| || || |||| ||| || || | |||||||| |||||||| |||| Sbjct: 317 gtcaggg-tcttcacgaagatctgcatgccgcc-cctcaggcggaggaccaggtgcaggg 260 Query: 351 tngactccttntggatgttg 370 | ||||| || ||||||||| Sbjct: 259 ttgactctttctggatgttg 240 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| || | || |||||||||| || Sbjct: 728 accaggtgcagggttgactccttctggatgttgtaatcagagagggtgcggccatcttcc 669 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || |||||||||| || | |||| Sbjct: 668 agctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctctttatcctgg 609 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| || |||||||||||| Sbjct: 608 atcttggccttcacgttctcgatggtgtcactgggctccacctctagggtgatggtcttg 549 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | |||||||| || ||||| | Sbjct: 548 ccggtcaggg-tcttcacgaagatctgcatgccgcc-cctcaggcggaggacaaggtgca 491 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 490 gggttgactctttctggatgttg 468 Score = 125 bits (63), Expect = 1e-25 Identities = 157/191 (82%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | || |||||||||| || Sbjct: 272 accaggtgcagggttgactctttctggatgttgtagtcagagagggtgcggccatcttcc 213 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || |||||||||| || | |||| Sbjct: 212 agctgcttgccggcaaagatgagcctctgctggtcaggggggatgccctctttatcctgg 153 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| || |||||||||||| Sbjct: 152 atcttggccttcacgttctcgatggtgtcactgggctccacctctagggtgatggtcttg 93 Query: 288 cccgtcagggt 298 || |||||||| Sbjct: 92 ccggtcagggt 82
>dbj|D17296.1|RATPILP Rattus norvegicus mRNA for polyubiquitin, complete cds, ten completely repetitive ubiquitins in tandem and one ubiguitin-like protein Length = 2545 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 2294 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 2235 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 2234 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 2175 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 2174 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 2115 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 2114 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgcaggaccaggtgca 2057 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 2056 gggtggactccttctggatgttg 2034 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 2066 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 2007 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 2006 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1947 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1946 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 1887 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 1886 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgcaggaccaggtgca 1829 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 1828 gggtggactccttctggatgttg 1806 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 1838 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 1779 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1778 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1719 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1718 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 1659 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 1658 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 1601 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 1600 gggtggactccttctggatgttg 1578 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 1610 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 1551 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1550 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1491 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1490 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 1431 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 1430 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 1373 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 1372 gggtggactccttctggatgttg 1350 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 1382 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 1323 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1322 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1263 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1262 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 1203 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 1202 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 1145 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 1144 gggtggactccttctggatgttg 1122 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 1154 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 1095 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1094 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1035 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1034 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 975 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 974 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgcaggaccaggtgca 917 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 916 gggtggactccttctggatgttg 894 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 926 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 867 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 866 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 807 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 806 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 747 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 746 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 689 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 688 gggtggactccttctggatgttg 666 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 698 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 639 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 638 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 579 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 578 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 519 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 518 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 461 Query: 348 gggtngactccttntggatgttg 370 ||| |||||||| ||||||||| Sbjct: 460 aggtggactccttctggatgttg 438 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| | ||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 470 accaggtgcaaggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 411 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 410 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 351 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 350 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 291 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 290 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgcaggaccaggtgca 233 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 232 gggtggactccttctggatgttg 210 Score = 117 bits (59), Expect = 3e-23 Identities = 147/179 (82%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 242 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 183 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 182 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 123 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 122 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtctt 64 Score = 52.0 bits (26), Expect = 0.001 Identities = 85/104 (81%), Gaps = 2/104 (1%) Strand = Plus / Minus Query: 267 accttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccaca 326 |||| ||| |||||||||||||| ||||||| |||| || || |||| ||| || || | Sbjct: 2363 acctccagagtgatggtcttgcctgtcaggg-tcttcacaaagatctgcatgccccctc- 2306 Query: 327 naaggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||| || |||||||| ||||| |||||||| ||||||||| Sbjct: 2305 tgaggcgcaggaccaggtgcagggtggactccttctggatgttg 2262
>gb|BC103477.1| Rattus norvegicus ubiquitin C, mRNA (cDNA clone MGC:124622 IMAGE:7929586), complete cds Length = 1501 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 1179 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 1120 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1119 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1060 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1059 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 1000 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 999 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 942 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 941 gggtggactccttctggatgttg 919 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 951 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 892 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 891 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 832 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 831 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 772 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 771 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 714 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 713 gggtggactccttctggatgttg 691 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 723 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 664 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 663 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 604 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 603 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 544 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 543 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 486 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 485 gggtggactccttctggatgttg 463 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 495 accaggtgcagggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 436 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 435 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 376 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 375 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtcttg 316 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| || || | ||||| || |||||||| | Sbjct: 315 cctgtcaggg-tcttcacaaagatctgcatgccccctc-tgaggcgaaggaccaggtgca 258 Query: 348 gggtngactccttntggatgttg 370 ||| |||||||| ||||||||| Sbjct: 257 aggtggactccttctggatgttg 235 Score = 109 bits (55), Expect = 6e-21 Identities = 146/179 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| | ||| |||| |||||||||||||| ||||| || |||||||||| || Sbjct: 267 accaggtgcaaggtggactccttctggatgttgtagtctgacagggtgcggccatcttcc 208 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 207 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 148 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 147 atctttgccttgacattttcaatggtgtcactgggctcgacctccagggtgatggtctt 89
>emb|AL356460.3|HS84M10 Homo sapiens chromosome 17 from PAC 84M10 map17p11.2 region D17S842-D17S953, complete sequence Length = 161943 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 7153 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 7212 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 7213 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 7272 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 7273 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 7332 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 7333 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 7390 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 7391 gggtcgactccttctggatgttg 7413 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || Sbjct: 6925 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttcc 6984 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || |||||||| | || | ||| Sbjct: 6985 agctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttctttatcttgg 7044 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 7045 atcttggccttcacattttcgatggtgtcactgggctccacctccagagtgatggtcttg 7104 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 7105 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 7162 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 7163 gggtcgactccttctggatgttg 7185 Score = 103 bits (52), Expect = 4e-19 Identities = 155/192 (80%) Strand = Plus / Plus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||| ||||||| || Sbjct: 7381 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 7440 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 7441 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 7500 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 7501 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 7560 Query: 288 cccgtcagggtt 299 || || |||||| Sbjct: 7561 ccggtaagggtt 7572
>emb|Z18245.1|BTPOLYUB Bos taurus gene for polyubiquitin Length = 1144 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 751 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 692 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 691 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 632 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 631 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 572 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || ||||| |||||||| | Sbjct: 571 ccggtcaggg-tcttcacgaagatctgcataccacc-cctcagacggaggaccaggtgca 514 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 513 gggtcgactctttctggatgttg 491 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 979 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 920 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 919 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 860 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 859 atcttggccttcacgttctcgatggtgtcactgggctccacttccagggtgatggtcttg 800 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || ||||| |||||||| | Sbjct: 799 ccggtcaggg-tcttcacgaagatctgcataccacc-cctcagacggaggaccaggtgca 742 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 741 gggtcgactctttctggatgttg 719 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || ||||||||||||| || Sbjct: 523 accaggtgcagggtcgactctttctggatgttgtaatcaaaaagagtgcggccatcttcc 464 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||||| ||| | |||| Sbjct: 463 agctgcttgccggcaaagatgagcctctgctggtcggggggaatgccctccttatcctgg 404 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 403 atcttggccttcacgttctcgatggtgtcactgggctccacttccagggtgatggtcttg 344 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || ||||| |||||||| | Sbjct: 343 ccggtcaggg-tcttcacgaaaatctgcataccacc-cctcagacggaggaccaggtgca 286 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 285 gggtcgactctttctggatgttg 263 Score = 127 bits (64), Expect = 3e-26 Identities = 158/192 (82%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 295 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 236 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 235 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 176 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 175 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 116 Query: 288 cccgtcagggtt 299 || ||||||||| Sbjct: 115 ccggtcagggtt 104
>emb|X04803.2|HSYUBG1 Homo sapiens ubiquitin gene Length = 3107 Score = 145 bits (73), Expect = 1e-31 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 2519 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 2460 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 2459 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 2400 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 2399 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 2340 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 2339 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 2282 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 2281 gggtcgactccttctggatgttg 2259 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 2747 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 2688 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | ||| Sbjct: 2687 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcttgg 2628 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 2627 atcttggccttcacattttcgatggtgtcactgggctccacttccagagtgatggtcttg 2568 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 2567 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 2510 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 2509 gggtcgactccttctggatgttg 2487 Score = 103 bits (52), Expect = 4e-19 Identities = 155/192 (80%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||| ||||||| || Sbjct: 2291 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 2232 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 2231 agctgcttgcctgcaaagatgagcctctgctggtcggggggaatgccttccttatcctgg 2172 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 2171 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 2112 Query: 288 cccgtcagggtt 299 || || |||||| Sbjct: 2111 ccggtaagggtt 2100
>emb|AJ000656.1|PB656UB Phreatamoeba balamuthi UBI2 sequence, putative polyubiquitin gene Length = 187 Score = 143 bits (72), Expect = 5e-31 Identities = 139/164 (84%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||||| ||| | ||||||||||| | ||||||||||||||| ||| Sbjct: 174 gactccttctggatgttgtagtcggccagagtgcggccgtcctcgagctgcttgcccgcg 115 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || || || |||||||||||||| |||||||||| ||||| |||||||||| ||||||| Sbjct: 114 aagatcagacgctgctggtccggggggatgccctccttgtcctggatcttctgcttgacg 55 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||||||| || | |||| || |||| ||| ||||| ||||| Sbjct: 54 ttgtcgatgctgtccgagggctcgacctccagagtgatcgtctt 11
>gb|AY099132.1| Cercomonas edax isolate pub4 polyubiquitin gene, partial cds Length = 495 Score = 143 bits (72), Expect = 5e-31 Identities = 117/134 (87%) Strand = Plus / Minus Query: 89 gccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctgg 148 ||||||||| |||| |||| ||||||||||| |||| |||||||||||||| ||| | Sbjct: 405 gccaccacggaggcgcagcacaaggtgaagggtggactccttctggatgttgtagtcagc 346 Query: 149 nagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggagg 208 || |||||||| | |||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 345 cagggtgcggccgtcctcgagctgcttgccggcgaaaatgaggcgctgctgatccggggg 286 Query: 209 gatgccctncttgt 222 |||||||| ||||| Sbjct: 285 gatgccctccttgt 272
>gb|AY099131.1| Cercomonas edax isolate pub3 polyubiquitin gene, partial cds Length = 448 Score = 143 bits (72), Expect = 5e-31 Identities = 117/134 (87%) Strand = Plus / Minus Query: 89 gccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctgg 148 ||||||||| |||| |||| ||||||||||| |||| |||||||||||||| ||| | Sbjct: 358 gccaccacggaggcgcagcacaaggtgaagggtggactccttctggatgttgtagtcagc 299 Query: 149 nagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggagg 208 || |||||||| | |||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 298 cagggtgcggccgtcctcgagctgcttgccggcgaaaatgaggcgctgctgatccggggg 239 Query: 209 gatgccctncttgt 222 |||||||| ||||| Sbjct: 238 gatgccctccttgt 225
>ref|XM_956819.1| Neurospora crassa OR74A hypothetical protein ( (AF056623) ubiquitin fusion protein [Magnaporthe grisea] ) (NCU05275.1) partial mRNA Length = 390 Score = 141 bits (71), Expect = 2e-30 Identities = 159/191 (83%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||| ||| ||||| |||| |||||||||||||| ||| | || |||||||||| |||| Sbjct: 212 accaagtggagggttgactccttctggatgttgtagtcggagagggtgcggccatcctcg 153 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || ||||| |||||||||||||| || ||||| |||| ||||| ||| Sbjct: 152 agctgcttgccagcaaaaatcaggcgctgctggtcgggcgggataccctccttgtcctga 93 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 |||||| |||||| ||||| || ||| | ||||||| |||| || |||||||||||| Sbjct: 92 atcttctgcttgacattgtcaatcgtgtcggaggactcaacctcgagcgtgatggtcttg 33 Query: 288 cccgtcagggt 298 ||||| ||||| Sbjct: 32 cccgtgagggt 22
>ref|XM_324631.1| Neurospora crassa OR74A hypothetical protein ( (AF056623) ubiquitin fusion protein [Magnaporthe grisea] ) (NCU05275.1) partial mRNA Length = 390 Score = 141 bits (71), Expect = 2e-30 Identities = 159/191 (83%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||| ||| ||||| |||| |||||||||||||| ||| | || |||||||||| |||| Sbjct: 212 accaagtggagggttgactccttctggatgttgtagtcggagagggtgcggccatcctcg 153 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || ||||| |||||||||||||| || ||||| |||| ||||| ||| Sbjct: 152 agctgcttgccagcaaaaatcaggcgctgctggtcgggcgggataccctccttgtcctga 93 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 |||||| |||||| ||||| || ||| | ||||||| |||| || |||||||||||| Sbjct: 92 atcttctgcttgacattgtcaatcgtgtcggaggactcaacctcgagcgtgatggtcttg 33 Query: 288 cccgtcagggt 298 ||||| ||||| Sbjct: 32 cccgtgagggt 22
>gb|AY232172.1| Drosophila yakuba clone yak-ad_RpL40 mRNA sequence Length = 384 Score = 141 bits (71), Expect = 2e-30 Identities = 173/210 (82%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 ||||||||||| | |||||| ||| ||||| |||| |||||||||||||| ||| | Sbjct: 227 ccaccacgcagacggagcaccaagtggagggtggactccttctggatgttgtagtcggac 168 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 ||||||||||| | ||| ||||||||||||||||| || || |||||||| || || || Sbjct: 167 agagtgcggccgtcctccagctgcttgccggcgaagatcagacgctgctgatctggggga 108 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||| | ||||||||| |||||||| || ||||||||| |||| | || |||| Sbjct: 107 atgccctccttatcctggatcttggccttgacattctcgatggtgtcagaaggctccacc 48 Query: 270 ttcagtgtgatggtcttgcccgtcagggtt 299 | || |||||||||||||| || |||||| Sbjct: 47 tccaaggtgatggtcttgccggtgagggtt 18
>gb|AY231778.1| Drosophila yakuba clone yak-em_RpL40 mRNA sequence Length = 384 Score = 141 bits (71), Expect = 2e-30 Identities = 173/210 (82%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 ||||||||||| | |||||| ||| ||||| |||| |||||||||||||| ||| | Sbjct: 227 ccaccacgcagacggagcaccaagtggagggtggactccttctggatgttgtagtcggac 168 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 ||||||||||| | ||| ||||||||||||||||| || || |||||||| || || || Sbjct: 167 agagtgcggccgtcctccagctgcttgccggcgaagatcagacgctgctgatctggggga 108 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||| | ||||||||| |||||||| || ||||||||| |||| | || |||| Sbjct: 107 atgccctccttatcctggatcttagccttgacattctcgatggtgtcagaaggctccacc 48 Query: 270 ttcagtgtgatggtcttgcccgtcagggtt 299 | || |||||||||||||| || |||||| Sbjct: 47 tccaaggtgatggtcttgccggtgagggtt 18
>emb|X66876.1|AOPOLUBI A.officinalis mRNA for poly-ubiquitin Length = 743 Score = 141 bits (71), Expect = 2e-30 Identities = 175/212 (82%), Gaps = 1/212 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||| ||| ||||| |||| |||||| ||||||| || | ||||| ||||||| || Sbjct: 282 gcaccaagtggagggtcgactccttctgaatgttgtaatcagcgagagtccggccatcct 223 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 |||| || || ||||| || ||||| | ||||||||| || |||||||||| ||||| | Sbjct: 222 cgagttgtttaccggcaaagatgagcctctgctggtcaggggggatgccctccttgtctt 163 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||||||||||||||||||||||||| ||||| || |||| || |||||||||| Sbjct: 162 ggatcttcgccttgacgttgtcgatggtgtcagagctctcgacctccaacgtgatggtct 103 Query: 286 tgcccgtcagggttcttgacnaanatctncat 317 |||| ||||||||| ||||| || |||| ||| Sbjct: 102 tgccggtcagggtt-ttgacgaaaatctgcat 72 Score = 77.8 bits (39), Expect = 2e-11 Identities = 142/177 (80%), Gaps = 2/177 (1%) Strand = Plus / Minus Query: 194 ctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtcgatggt 253 |||||| ||||| || || |||| ||| | ||| ||||||||||||||||||||||| || Sbjct: 422 ctgctgatccggcggaatcccctccttatcctgtatcttcgccttgacgttgtcgatcgt 363 Query: 254 gncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatct 313 | ||||| || ||||| || ||||| ||||| || |||| || ||||||| || |||| Sbjct: 362 gtcagagctctccacctccaaggtgatcgtcttcccagtcaagg-tcttgacaaatatct 304 Query: 314 ncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatgttg 370 ||| || |||| ||| | ||||||| ||||||||| |||||||| || |||||| Sbjct: 303 gcatccctccac-gaagcctcagcaccaagtggagggtcgactccttctgaatgttg 248
>dbj|AK103890.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150D17, full insert sequence Length = 783 Score = 141 bits (71), Expect = 2e-30 Identities = 128/149 (85%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| || || |||| |||||||||||||| ||| | || |||||||| | | Sbjct: 290 gcaccaggtgcagcgtcgactccttctggatgttgtagtcggccagggtgcggccgtcat 231 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | |||||||| |||||||| |||||||||||||||||||| ||||| || | ||||| || Sbjct: 230 ccagctgcttcccggcgaagatgaggcgctgctggtccggcgggataccttccttgtcct 171 Query: 226 ggatcttcgccttgacgttgtcgatggtg 254 ||||||| ||||||||||||||||||||| Sbjct: 170 ggatcttggccttgacgttgtcgatggtg 142 Score = 56.0 bits (28), Expect = 8e-05 Identities = 38/42 (90%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||||||| || || |||||||| ||||||||| Sbjct: 297 aggcggagcaccaggtgcagcgtcgactccttctggatgttg 256
>gb|M88684.1|AGLPOLYUBI Aglaothamnion neglectum ubiquitin mRNA, complete cds Length = 1520 Score = 141 bits (71), Expect = 2e-30 Identities = 142/168 (84%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||| ||||| ||| | || |||||||||| ||||||||||||||| ||||| || Sbjct: 990 cttctggaggttgtagtcagaaagggtgcggccatcctcgagctgcttgcccgcgaagat 931 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 |||||||||||| ||||| || ||||||| ||| | ||||||||||| ||| ||||| || Sbjct: 930 gaggcgctgctgatccgggggaatgccctccttatcctggatcttcgtcttcacgttctc 871 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcag 295 ||| ||| |||| |||| ||||| || ||||| |||||||||||||| Sbjct: 870 gatcgtgtcagacgactccacctcgagcgtgatcgtcttgcccgtcag 823 Score = 129 bits (65), Expect = 7e-27 Identities = 153/185 (82%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| || || |||| |||||| |||||| ||| | || |||||||| | |||| Sbjct: 326 accaggtggagcgtcgactccttctgattgttgtagtcggatagcgtgcggccgtcctcg 267 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| ||||| || ||||||||||||||||| ||||| |||| ||| | |||| Sbjct: 266 agctgcttgcccgcgaagatcaggcgctgctggtccggcgggataccctccttatcctgg 207 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| | ||||||||| ||||| ||| | ||||||| |||| ||| ||||||||||| Sbjct: 206 atcttggtcttgacgttctcgatagtgtccgaggactcgacctccagggtgatggtctta 147 Query: 288 cccgt 292 ||||| Sbjct: 146 cccgt 142 Score = 123 bits (62), Expect = 4e-25 Identities = 139/167 (83%) Strand = Plus / Minus Query: 132 tggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaatgagg 191 |||||||||| ||| | || |||||||| | ||||||||||||||| ||||| |||||| Sbjct: 530 tggatgttgtagtcggacagcgtgcggccgtcctcgagctgcttgcccgcgaagatgagg 471 Query: 192 cgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtcgatg 251 |||||||||||||| ||||| |||| ||| | ||| ||||| | ||| || || || ||| Sbjct: 470 cgctgctggtccggcgggattccctccttatcctgaatcttggtcttcacattctcaatg 411 Query: 252 gtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggt 298 ||| | ||||||| |||| ||| ||||||||||||||||| ||||| Sbjct: 410 gtgtccgaggactcgacctccagggtgatggtcttgcccgtaagggt 364 Score = 121 bits (61), Expect = 2e-24 Identities = 112/131 (85%) Strand = Plus / Minus Query: 120 gtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccg 179 ||||||| |||||||||||||| ||| | || ||||| |||| |||||||||||| || Sbjct: 1454 gtagactccttctggatgttgtagtcagagagcgtgcgcccatcctcgagctgctttcca 1395 Query: 180 gcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttg 239 ||||| ||||| ||||||||||||||||| || |||| ||||| ||||||||||| ||| Sbjct: 1394 gcgaagatgagacgctgctggtccggaggaattccctccttgtcctggatcttcgtcttc 1335 Query: 240 acgttgtcgat 250 ||||| ||||| Sbjct: 1334 acgttttcgat 1324 Score = 105 bits (53), Expect = 1e-19 Identities = 209/263 (79%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| || || |||| ||||||||||||| ||| | || |||||||| | || Sbjct: 782 accaggtgcagagtcgactctttctggatgttgtagtcagacagggtgcggccgtcttcc 723 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || ||||||||||||||||| |||||||| | ||| | ||| Sbjct: 722 agctgcttgccggcaaagataaggcgctgctggtccggcgggatgccttccttatcctga 663 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| | ||| || || || |||||| |||| |||| |||| ||| |||||||||||| Sbjct: 662 atcttggtcttcacattctcaatggtgtcagaagactcgacctccagggtgatggtcttg 603 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 ||||| | ||| ||| || || |||| ||| || || | | ||||||||||||| || | Sbjct: 602 cccgtaatggt-cttcacaaagatctgcatgcctccgcgca-ggcggagcaccagatgca 545 Query: 348 gggtngactccttntggatgttg 370 | || || ||||| ||||||||| Sbjct: 544 gcgtcgattccttttggatgttg 522 Score = 69.9 bits (35), Expect = 6e-09 Identities = 161/206 (78%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 ||||||||||||| | | || || || || || |||| ||||||||| || | ||| | Sbjct: 1256 ccaccacgcaggcgaagaacgagatgcagcgtcgactccttctggatattatagtcggaa 1197 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 |||||||| || | ||||||||||||||| || || || | ||||||||||||||| ||| Sbjct: 1196 agagtgcgaccgtcctcgagctgcttgcccgcaaagatcaagcgctgctggtccggcggg 1137 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 || || | ||| | ||| ||||| | ||| || || || || ||| | || |||| |||| Sbjct: 1136 ataccttccttatcctgaatctttgtcttcacattctcaatagtgtccgacgactccacc 1077 Query: 270 ttcagtgtgatggtcttgcccgtcag 295 | || ||||| |||||||||||||| Sbjct: 1076 tcgagcgtgatcgtcttgcccgtcag 1051
>gb|AC152972.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0048I04, complete sequence Length = 35440 Score = 141 bits (71), Expect = 2e-30 Identities = 215/265 (81%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| |||||||||| |||||| ||||||| ||| | || || ||||||| | Sbjct: 17567 gcaccaggtggagggtagactccttctgaatgttgtagtcggcgagggtacggccatctt 17508 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| || |||||||||||||| || || || || | ||||| || Sbjct: 17507 ccagctgcttgccggcgaagatcaggcgctgctggtctgggggaataccttccttgtcct 17448 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||| || ||||||||||| | ||| || |||| ||| || ||||||| Sbjct: 17447 ggatcttagccttcacattgtcgatggtatcggagctctcaacctccagagtaatggtct 17388 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| || || | ||||||| || |||| ||||||||| | ||||||||||||| ||| Sbjct: 17387 tgccagtaagag-tcttgacgaagatctgcataccacc-cctgaggcggagcaccaagtg 17330 Query: 346 gagggtngactccttntggatgttg 370 ||||| |||||||| || |||||| Sbjct: 17329 tagggtagactccttctgaatgttg 17305 Score = 141 bits (71), Expect = 2e-30 Identities = 215/265 (81%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||| ||| |||||||||| |||||| ||||||| ||| | || |||||||||| || Sbjct: 17339 gcaccaagtgtagggtagactccttctgaatgttgtagtcggcaagggtgcggccatcct 17280 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | |||||||| || ||||| ||||| | |||||||||||| |||||||||| ||| | || Sbjct: 17279 ccagctgcttaccagcgaagatgagtctctgctggtccggggggatgccctccttatcct 17220 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||||||||| |||||||| |||||| | ||| || |||| ||| || || |||| Sbjct: 17219 ggatcttcgccttcacgttgtcaatggtgtctgagctctcaacctccagggtaatagtct 17160 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 |||| || || | ||||||| || |||| ||| ||||| | ||||| || || ||||| Sbjct: 17159 tgccagtgagag-tcttgacgaaaatctgcattccacc-ccttaggcgcagaacaaggtg 17102 Query: 346 gagggtngactccttntggatgttg 370 ||||| |||||||| ||||||||| Sbjct: 17101 aagggtggactccttctggatgttg 17077 Score = 139 bits (70), Expect = 7e-30 Identities = 211/260 (81%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||||||||| |||| |||||||||||||| ||| | || || | ||||| ||| ||| Sbjct: 17106 aggtgaagggtggactccttctggatgttgtagtcagcgagggtcctgccatcctccagc 17047 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||||||||| ||||| || |||||||| || || || ||||||| ||||| ||||||| Sbjct: 17046 tgcttgccggcaaaaataagacgctgctgatctgggggaatgccctccttgtcctggatc 16987 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 |||||||| ||||||||||| ||| | || |||| |||| || || ||||||||||| Sbjct: 16986 ttcgccttcacgttgtcgatcgtgtctgatgactcaacctcaagcgtaatggtcttgcca 16927 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || |||| |||| || || |||| ||| || || | |||||||| || ||||| |||| Sbjct: 16926 gtaaggg-tcttcacgaagatctgcattcctcc-ccttaggcggagaacaaggtgaaggg 16869 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 16868 tggactccttctggatgttg 16849 Score = 109 bits (55), Expect = 6e-21 Identities = 146/179 (81%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| || | |||||||||||||| ||| | || ||||| |||| || ||| Sbjct: 16650 aggtggagggtggattccttctggatgttgtagtcagcaagcgtgcgcccatcttcaagc 16591 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| ||||| ||||| |||||||||||||| ||||| |||| ||||| ||||||| Sbjct: 16590 tgcttgccagcgaagatgagacgctgctggtccggtgggattccctccttgtcctggatc 16531 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcc 289 || ||||| || ||||| ||||| | ||||||| |||| || || ||||||||||| Sbjct: 16530 ttggcctttacattgtcaatggtatccgaggactcaacctcaagggttatggtcttgcc 16472 Score = 107 bits (54), Expect = 3e-20 Identities = 207/260 (79%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||||||||| |||| |||||||||||||| ||| | || || | |||| ||||||| Sbjct: 16878 aggtgaagggtggactccttctggatgttgtagtcagcaagggtcctaccatcctcgagc 16819 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| || || || || |||||||||||||| || || || | ||||| ||||||| Sbjct: 16818 tgcttgccagcaaagatcagacgctgctggtccgggggaatcccttccttgtcctggatc 16759 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| |||||||| || || |||| |||| |||| || ||||| |||||||| Sbjct: 16758 tttgccttaacgttgtcaatagtatcagaagactcaacctcaagggtgatagtcttgcca 16699 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 |||| || ||||||| || || | ||| || || | |||||||| || |||||||||| Sbjct: 16698 gtcaagg-tcttgacaaagatttgcatgcctcc-ccggaggcggaggacaaggtggaggg 16641 Query: 351 tngactccttntggatgttg 370 | || ||||| ||||||||| Sbjct: 16640 tggattccttctggatgttg 16621 Score = 63.9 bits (32), Expect = 3e-07 Identities = 39/42 (92%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||||||||||||||| |||||||| || |||||| Sbjct: 17574 aggcggagcaccaggtggagggtagactccttctgaatgttg 17533
>ref|NM_011664.2| Mus musculus ubiquitin B (Ubb), mRNA Length = 1167 Score = 139 bits (70), Expect = 7e-30 Identities = 228/283 (80%), Gaps = 2/283 (0%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 784 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 725 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 724 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 665 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 664 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 605 Query: 268 ccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacan 327 ||| ||| |||||||||||||| ||||||| |||| || || |||| ||| ||||| | Sbjct: 604 cctccagggtgatggtcttgccagtcaggg-tcttcacgaagatctgcatgccacc-cct 547 Query: 328 aaggcggagcaccaggtggagggtngactccttntggatgttg 370 || ||||| |||||||| ||||| ||||| || ||||||||| Sbjct: 546 cagacggaggaccaggtgcagggttgactctttctggatgttg 504 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | || |||||||||| || Sbjct: 536 accaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggccatcttcc 477 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 476 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 417 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 416 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 357 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 356 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 299 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 298 gggttgactccttctggatgttg 276 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 992 accaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggccatcttct 933 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 932 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 873 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 872 atcttggccttcacattctcgatggtgtcactgggctccacctccaaggtgatggtcttg 813 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 812 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 755 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 754 gggttgactccttctggatgttg 732 Score = 119 bits (60), Expect = 7e-24 Identities = 171/211 (81%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 328 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 269 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 268 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 209 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 208 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 149 Query: 268 ccttcagtgtgatggtcttgcccgtcagggt 298 ||| || |||||||||||||| |||||||| Sbjct: 148 cctctagggtgatggtcttgccggtcagggt 118
>emb|X87156.1|APOLYUBIQ Acanthamoeba sp. 4b3 polyubiquitin gene Length = 2388 Score = 139 bits (70), Expect = 7e-30 Identities = 202/248 (81%), Gaps = 2/248 (0%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||||| ||| | || |||||||| | ||| |||||||| |||||| Sbjct: 2295 gactccttctggatgttgtagtcggcgagcgtgcggccgtcctcaagctgcttaccggcg 2236 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || ||||||||||||||||| || || || |||| ||||| |||||||||| ||| ||| Sbjct: 2235 aagatgaggcgctgctggtcggggggaataccctccttgtcctggatcttctgcttcacg 2176 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttctt 302 || ||||| ||| | || |||| |||| || ||||||||||| || || |||| |||| Sbjct: 2175 ttctcgatcgtgtcggacgactcgacctcgagggtgatggtcttaccggtgaggg-tctt 2117 Query: 303 gacnaanatctncataccaccacanaaggcggagcaccaggtggagggtngactccttnt 362 || || |||| |||||| |||| ||| ||||| || ||||||||||| |||||||| | Sbjct: 2116 cacgaagatctgcataccgccac-gaagacggaggacgaggtggagggtggactccttct 2058 Query: 363 ggatgttg 370 |||||||| Sbjct: 2057 ggatgttg 2050 Score = 121 bits (61), Expect = 2e-24 Identities = 121/143 (84%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||||| ||| | || |||||||| | ||||||| Sbjct: 2079 aggtggagggtggactccttctggatgttgtagtcggcgagggtgcggccgtcctcgagc 2020 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||| |||||||| ||||| |||||||| || ||||||||||||| ||||| ||||||| Sbjct: 2019 tgcttaccggcgaagatgagacgctgctgatcgggagggatgccctccttgtcctggatc 1960 Query: 231 ttcgccttgacgttgtcgatggt 253 || ||| ||||| |||||||| Sbjct: 1959 ttttgcttcacgttctcgatggt 1937 Score = 58.0 bits (29), Expect = 2e-05 Identities = 79/95 (83%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 276 gtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcgga 335 |||||||||||||| ||||| | ||||||| || |||| ||| ||||||| || |||| Sbjct: 2370 gtgatggtcttgccggtcagcg-tcttgacgaagatctgcatgccaccac-ggagacgga 2313 Query: 336 gcaccaggtggagggtngactccttntggatgttg 370 | || |||||||| || |||||||| ||||||||| Sbjct: 2312 ggacgaggtggagagtcgactccttctggatgttg 2278
>gb|BC100341.1| Mus musculus ubiquitin B, mRNA (cDNA clone MGC:117670 IMAGE:30787432), complete cds Length = 1145 Score = 139 bits (70), Expect = 7e-30 Identities = 228/283 (80%), Gaps = 2/283 (0%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 738 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 679 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 678 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 619 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 618 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 559 Query: 268 ccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacan 327 ||| ||| |||||||||||||| ||||||| |||| || || |||| ||| ||||| | Sbjct: 558 cctccagggtgatggtcttgccagtcaggg-tcttcacgaagatctgcatgccacc-cct 501 Query: 328 aaggcggagcaccaggtggagggtngactccttntggatgttg 370 || ||||| |||||||| ||||| ||||| || ||||||||| Sbjct: 500 cagacggaggaccaggtgcagggttgactctttctggatgttg 458 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | || |||||||||| || Sbjct: 490 accaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggccatcttcc 431 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 430 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 371 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 370 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 311 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 310 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 253 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 252 gggttgactccttctggatgttg 230 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 946 accaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggccatcttct 887 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 886 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 827 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 826 atcttggccttcacattctcgatggtgtcactgggctccacctccaaggtgatggtcttg 767 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 766 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 709 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 708 gggttgactccttctggatgttg 686 Score = 119 bits (60), Expect = 7e-24 Identities = 171/211 (81%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 282 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 223 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 222 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 163 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 162 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 103 Query: 268 ccttcagtgtgatggtcttgcccgtcagggt 298 ||| || |||||||||||||| |||||||| Sbjct: 102 cctctagggtgatggtcttgccggtcagggt 72
>emb|AJ223328.1|NTAJ3328 Nicotiana tabacum TUQG2 gene, complete CDS Length = 2074 Score = 139 bits (70), Expect = 7e-30 Identities = 128/149 (85%) Strand = Plus / Minus Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 ||||||||||||| |||||||||||| || ||||| || |||||||||||||| |||||| Sbjct: 1080 agagtgcggccatcctcgagctgcttaccagcgaagatcaggcgctgctggtcaggaggg 1021 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||||| ||||||||||| ||| || ||||||||||| | ||||||| ||| Sbjct: 1020 atgccctccttgtcctggatcttcgacttaacattgtcgatggtatcggaggactcgacc 961 Query: 270 ttcagtgtgatggtcttgcccgtcagggt 298 | || |||||||||||||| || ||||| Sbjct: 960 tcaagagtgatggtcttgccggtgagggt 932 Score = 99.6 bits (50), Expect = 6e-18 Identities = 139/171 (81%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| || | || |||||||||| ||||||||||||||| || || || Sbjct: 819 cttctggatgttgtaatcagaaagggtgcggccatcctcgagctgcttgccagcaaagat 760 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 | ||||||||||| ||||||||||||| ||||| ||| ||||| | ||| || ||||| Sbjct: 759 caaacgctgctggtcaggagggatgccctccttgtcctgaatcttggacttcacattgtc 700 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggt 298 |||||| | || |||| |||| || |||||||||||||| || ||||| Sbjct: 699 gatggtatcggaagactcaacctcgagggtgatggtcttgccggtgagggt 649 Score = 87.7 bits (44), Expect = 2e-14 Identities = 158/198 (79%), Gaps = 1/198 (0%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| || || ||||| | ||| |||||||| || || || || Sbjct: 1330 cttctggatgttgtagtcgctcagggtacggccgtcctcaagctgcttaccagcaaagat 1271 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 || ||||||||||| ||||| || |||| ||| | ||||||||| | ||| || ||||| Sbjct: 1270 aagacgctgctggtcaggaggaataccctccttatcctggatcttggacttcacattgtc 1211 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacna 307 ||||||| | || |||| |||| || |||||||||||||| || |||| ||||||| | Sbjct: 1210 gatggtgtctgatgactcgacctccaaagtgatggtcttgccagtaaggg-tcttgacga 1152 Query: 308 anatctncataccaccac 325 | |||| ||||||||||| Sbjct: 1151 agatctgcataccaccac 1134 Score = 61.9 bits (31), Expect = 1e-06 Identities = 74/89 (83%) Strand = Plus / Minus Query: 165 tcgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnc 224 ||||||||||| || || || || || ||||||||||| |||||||| |||| ||| | | Sbjct: 1521 tcgagctgcttaccagcaaagataagacgctgctggtcaggagggataccctccttatcc 1462 Query: 225 tggatcttcgccttgacgttgtcgatggt 253 || ||||| | |||||||||||| ||||| Sbjct: 1461 tgaatcttggacttgacgttgtcaatggt 1433
>emb|AL596181.10| Mouse DNA sequence from clone RP23-234K24 on chromosome 11 Contains nine novel genes, the Trpv2 for member 2 transient receptor potential cation channel subfamily V, the Ubb gene for ubiquitin B, the 3' end of the gene for the ortholog of human and rat phosphatidylinositol glycan class L PIGL and five CpG islands, complete sequence Length = 195339 Score = 139 bits (70), Expect = 7e-30 Identities = 228/283 (80%), Gaps = 2/283 (0%) Strand = Plus / Plus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 121321 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 121380 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 121381 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 121440 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 121441 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 121500 Query: 268 ccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacan 327 ||| ||| |||||||||||||| ||||||| |||| || || |||| ||| ||||| | Sbjct: 121501 cctccagggtgatggtcttgccagtcaggg-tcttcacgaagatctgcatgccacc-cct 121558 Query: 328 aaggcggagcaccaggtggagggtngactccttntggatgttg 370 || ||||| |||||||| ||||| ||||| || ||||||||| Sbjct: 121559 cagacggaggaccaggtgcagggttgactctttctggatgttg 121601 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | || |||||||||| || Sbjct: 121569 accaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggccatcttcc 121628 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 121629 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 121688 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 121689 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 121748 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 121749 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 121806 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 121807 gggttgactccttctggatgttg 121829 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 121113 accaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggccatcttct 121172 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 121173 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 121232 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 121233 atcttggccttcacattctcgatggtgtcactgggctccacctccaaggtgatggtcttg 121292 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 121293 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 121350 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 121351 gggttgactccttctggatgttg 121373 Score = 119 bits (60), Expect = 7e-24 Identities = 171/211 (81%) Strand = Plus / Plus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 121777 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 121836 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 121837 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 121896 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 121897 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 121956 Query: 268 ccttcagtgtgatggtcttgcccgtcagggt 298 ||| || |||||||||||||| |||||||| Sbjct: 121957 cctctagggtgatggtcttgccggtcagggt 121987
>dbj|D28123.1|SOYSUBI3 Glycine max SUBI-3 gene for ubiquitin, complete cds Length = 2170 Score = 139 bits (70), Expect = 7e-30 Identities = 124/144 (86%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||||||||| || | |||||||||||||| ||| | || |||||||| | ||||||| Sbjct: 1353 aggtgaagggttgattccttctggatgttgtagtcggcgagggtgcggccgtcctcgagc 1294 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||| |||||||| ||||| || ||||||||||| ||||| |||| ||||| ||||||| Sbjct: 1293 tgctttccggcgaagatgagacgttgctggtccggggggataccctccttgtcctggatc 1234 Query: 231 ttcgccttgacgttgtcgatggtg 254 || ||||||||||| ||||||||| Sbjct: 1233 ttggccttgacgttatcgatggtg 1210 Score = 123 bits (62), Expect = 4e-25 Identities = 169/207 (81%), Gaps = 1/207 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 |||||||| ||| || |||||| ||||||| ||| | || || ||||| | ||| || Sbjct: 1125 aggtgaagagtactctccttctgaatgttgtagtcagcaagggtacggccgtcctcaagt 1066 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||| |||||||||||||| || ||||||||||| ||||| || | ||||| ||||||| Sbjct: 1065 tgctttccggcgaaaatgagacgttgctggtccggggggattccttccttgtcctggatc 1006 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||||||||||||||||||| ||||| | ||||| || |||||||||||||| Sbjct: 1005 ttggccttgacgttgtcgatggtgtcagagctttccacctcaagggtgatggtcttgccg 946 Query: 291 gtcagggttcttgacnaanatctncat 317 || |||| ||||||| || |||| ||| Sbjct: 945 gtgaggg-tcttgacgaagatctgcat 920 Score = 115 bits (58), Expect = 1e-22 Identities = 208/260 (80%), Gaps = 2/260 (0%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||||||||| || | |||||||||||||| ||| | || || | |||| ||||||| Sbjct: 1809 aggtgaagggttgattccttctggatgttgtagtcagcgagggtccttccatcctcgagc 1750 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| || ||||| || | |||||||||||| |||||||| | ||||| ||| ||| Sbjct: 1749 tgcttgccagcaaaaatcagcctctgctggtccggtgggatgccttccttgtcctgaatc 1690 Query: 231 ttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgccc 290 || ||||| || ||||| |||||| ||||| || ||||| || || || ||||| ||| Sbjct: 1689 ttggccttcacattgtcaatggtgtcagagctctccacctcgagggtaatagtcttaccc 1630 Query: 291 gtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggaggg 350 || || | |||| || || |||| ||||||||||| ||| || | ||||| |||||| | Sbjct: 1629 gtaagag-tcttcacgaaaatctgcataccaccac-gaagacgcaacaccaagtggagag 1572 Query: 351 tngactccttntggatgttg 370 | |||||||| ||||||||| Sbjct: 1571 ttgactccttctggatgttg 1552 Score = 107 bits (54), Expect = 3e-20 Identities = 111/132 (84%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||||| ||| | || ||||| || | |||||||||||| |||||| Sbjct: 1569 gactccttctggatgttgtagtcagcaagggtgcgtccgtcctcgagctgcttcccggcg 1510 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || || || | ||||||||| || ||||| |||| ||||| ||| ||||| ||||||||| Sbjct: 1509 aagatcagcctctgctggtctggggggattccctccttgtcctgaatcttagccttgacg 1450 Query: 243 ttgtcgatggtg 254 |||||||||||| Sbjct: 1449 ttgtcgatggtg 1438
>dbj|AK132747.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4922505B09 product:ubiquitin B, full insert sequence Length = 1166 Score = 139 bits (70), Expect = 7e-30 Identities = 228/283 (80%), Gaps = 2/283 (0%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 784 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 725 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 724 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 665 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 664 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 605 Query: 268 ccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacan 327 ||| ||| |||||||||||||| ||||||| |||| || || |||| ||| ||||| | Sbjct: 604 cctccagggtgatggtcttgccagtcaggg-tcttcacgaagatctgcatgccacc-cct 547 Query: 328 aaggcggagcaccaggtggagggtngactccttntggatgttg 370 || ||||| |||||||| ||||| ||||| || ||||||||| Sbjct: 546 cagacggaggaccaggtgcagggttgactctttctggatgttg 504 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | || |||||||||| || Sbjct: 536 accaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggccatcttcc 477 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 476 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 417 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 416 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 357 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 356 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 299 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 298 gggttgactccttctggatgttg 276 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 992 accaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggccatcttct 933 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 932 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 873 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 872 atcttggccttcacattctcgatggtgtcactgggctccacctccaaggtgatggtcttg 813 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 812 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 755 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 754 gggttgactccttctggatgttg 732 Score = 119 bits (60), Expect = 7e-24 Identities = 171/211 (81%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 328 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 269 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 268 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 209 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 208 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 149 Query: 268 ccttcagtgtgatggtcttgcccgtcagggt 298 ||| || |||||||||||||| |||||||| Sbjct: 148 cctctagggtgatggtcttgccggtcagggt 118
>dbj|AK165313.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430012C16 product:ubiquitin B, full insert sequence Length = 1159 Score = 139 bits (70), Expect = 7e-30 Identities = 228/283 (80%), Gaps = 2/283 (0%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 783 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 724 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 723 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 664 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 663 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 604 Query: 268 ccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacan 327 ||| ||| |||||||||||||| ||||||| |||| || || |||| ||| ||||| | Sbjct: 603 cctccagggtgatggtcttgccagtcaggg-tcttcacgaagatctgcatgccacc-cct 546 Query: 328 aaggcggagcaccaggtggagggtngactccttntggatgttg 370 || ||||| |||||||| ||||| ||||| || ||||||||| Sbjct: 545 cagacggaggaccaggtgcagggttgactctttctggatgttg 503 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | || |||||||||| || Sbjct: 535 accaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggccatcttcc 476 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 475 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 416 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 415 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 356 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 355 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 298 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 297 gggttgactccttctggatgttg 275 Score = 121 bits (61), Expect = 2e-24 Identities = 211/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 991 accaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggccatcttct 932 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 931 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 872 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| | || || ||||| || |||||||||||| Sbjct: 871 atcttggccttcacattctcgatggtgtctctgggctccacctccaaggtgatggtcttg 812 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 811 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 754 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 753 gggttgactccttctggatgttg 731 Score = 111 bits (56), Expect = 2e-21 Identities = 171/211 (81%), Gaps = 1/211 (0%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 327 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 268 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 267 agagggtgcggccatcttc-agctgcttgccggcaaagatcagcctctgctggtcagggg 209 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 208 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 149 Query: 268 ccttcagtgtgatggtcttgcccgtcagggt 298 ||| || |||||||||||||| |||||||| Sbjct: 148 cctctagggtgatggtcttgccggtcagggt 118
>dbj|AK013873.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3000008M07 product:ubiquitin B, full insert sequence Length = 1162 Score = 139 bits (70), Expect = 7e-30 Identities = 228/283 (80%), Gaps = 2/283 (0%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 782 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 723 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 722 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 663 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 662 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 603 Query: 268 ccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacan 327 ||| ||| |||||||||||||| ||||||| |||| || || |||| ||| ||||| | Sbjct: 602 cctccagggtgatggtcttgccagtcaggg-tcttcacgaagatctgcatgccacc-cct 545 Query: 328 aaggcggagcaccaggtggagggtngactccttntggatgttg 370 || ||||| |||||||| ||||| ||||| || ||||||||| Sbjct: 544 cagacggaggaccaggtgcagggttgactctttctggatgttg 502 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 990 accaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggccatcttct 931 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| ||| | |||| Sbjct: 930 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctccttatcctgg 871 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 870 atcttggccttcacattctcgatggtgtcactgggctccacctccaaggtgatggtcttg 811 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 810 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 753 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 752 gggttgactccttctggatgttg 730 Score = 113 bits (57), Expect = 4e-22 Identities = 210/263 (79%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | || |||||||||| || Sbjct: 534 accaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggccatcttcc 475 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 474 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 415 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || |||| ||| |||||||||||| Sbjct: 414 atcttggccttcacgttctcgatggtgtcactgggctccacccccagggtgatggtcttg 355 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || || |||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 354 ccggtaaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 297 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||| ||||| Sbjct: 296 gggttgactccttctggttgttg 274 Score = 87.7 bits (44), Expect = 2e-14 Identities = 167/211 (79%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| ||||||| |||||| || | Sbjct: 326 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggttgttgtaatcag 267 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||| |||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 266 agagggtgcttccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 207 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | | ||||||| ||||| ||||| ||||||||| || || || || Sbjct: 206 ggatgccctctttatcccggatcttggccttcacgttctcgatggtgtcactgggctcca 147 Query: 268 ccttcagtgtgatggtcttgcccgtcagggt 298 ||| || |||||||||||||| |||||||| Sbjct: 146 cctctagggtgatggtcttgccggtcagggt 116
>dbj|AK010625.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410036G24 product:ubiquitin B, full insert sequence Length = 1160 Score = 139 bits (70), Expect = 7e-30 Identities = 228/283 (80%), Gaps = 2/283 (0%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 784 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 725 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 724 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 665 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 664 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 605 Query: 268 ccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacan 327 ||| ||| |||||||||||||| ||||||| |||| || || |||| ||| ||||| | Sbjct: 604 cctccagggtgatggtcttgccagtcaggg-tcttcacgaagatctgcatgccacc-cct 547 Query: 328 aaggcggagcaccaggtggagggtngactccttntggatgttg 370 || ||||| |||||||| ||||| ||||| || ||||||||| Sbjct: 546 cagacggaggaccaggtgcagggttgactctttctggatgttg 504 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | || |||||||||| || Sbjct: 536 accaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggccatcttcc 477 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 476 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 417 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 416 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 357 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 356 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 299 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 298 gggttgactccttctggatgttg 276 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 992 accaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggccatcttct 933 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 932 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 873 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 872 atcttggccttcacattctcgatggtgtcactgggctccacctccaaggtgatggtcttg 813 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 812 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 755 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 754 gggttgactccttctggatgttg 732 Score = 119 bits (60), Expect = 7e-24 Identities = 171/211 (81%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 328 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 269 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 268 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 209 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 208 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 149 Query: 268 ccttcagtgtgatggtcttgcccgtcagggt 298 ||| || |||||||||||||| |||||||| Sbjct: 148 cctctagggtgatggtcttgccggtcagggt 118
>dbj|AK010413.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410005G06 product:polyubiquitin 4, full insert sequence Length = 1165 Score = 139 bits (70), Expect = 7e-30 Identities = 228/283 (80%), Gaps = 2/283 (0%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 785 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 726 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 725 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 666 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 665 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 606 Query: 268 ccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacan 327 ||| ||| |||||||||||||| ||||||| |||| || || |||| ||| ||||| | Sbjct: 605 cctccagggtgatggtcttgccagtcaggg-tcttcacgaagatctgcatgccacc-cct 548 Query: 328 aaggcggagcaccaggtggagggtngactccttntggatgttg 370 || ||||| |||||||| ||||| ||||| || ||||||||| Sbjct: 547 cagacggaggaccaggtgcagggttgactctttctggatgttg 505 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | || |||||||||| || Sbjct: 537 accaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggccatcttcc 478 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 477 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 418 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 417 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 358 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 357 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 300 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 299 gggttgactccttctggatgttg 277 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 993 accaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggccatcttct 934 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 933 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 874 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 873 atcttggccttcacattctcgatggtgtcactgggctccacctccaaggtgatggtcttg 814 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 813 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 756 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 755 gggttgactccttctggatgttg 733 Score = 119 bits (60), Expect = 7e-24 Identities = 171/211 (81%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 329 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 270 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 269 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 210 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 209 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 150 Query: 268 ccttcagtgtgatggtcttgcccgtcagggt 298 ||| || |||||||||||||| |||||||| Sbjct: 149 cctctagggtgatggtcttgccggtcagggt 119
>dbj|AK013027.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810407D23 product:ubiquitin B, full insert sequence Length = 1167 Score = 139 bits (70), Expect = 7e-30 Identities = 228/283 (80%), Gaps = 2/283 (0%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 784 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 725 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 724 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 665 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 664 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 605 Query: 268 ccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacan 327 ||| ||| |||||||||||||| ||||||| |||| || || |||| ||| ||||| | Sbjct: 604 cctccagggtgatggtcttgccagtcaggg-tcttcacgaagatctgcatgccacc-cct 547 Query: 328 aaggcggagcaccaggtggagggtngactccttntggatgttg 370 || ||||| |||||||| ||||| ||||| || ||||||||| Sbjct: 546 cagacggaggaccaggtgcagggttgactctttctggatgttg 504 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | || |||||||||| || Sbjct: 536 accaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggccatcttcc 477 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 476 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 417 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 416 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 357 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 356 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 299 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 298 gggttgactccttctggatgttg 276 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 992 accaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggccatcttct 933 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 932 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 873 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 872 atcttggccttcacattctcgatggtgtcactgggctccacctccaaggtgatggtcttg 813 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 812 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 755 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 754 gggttgactccttctggatgttg 732 Score = 119 bits (60), Expect = 7e-24 Identities = 171/211 (81%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 328 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 269 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 268 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 209 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 208 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 149 Query: 268 ccttcagtgtgatggtcttgcccgtcagggt 298 ||| || |||||||||||||| |||||||| Sbjct: 148 cctctagggtgatggtcttgccggtcagggt 118
>dbj|AK007273.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700124N12 product:ubiquitin B, full insert sequence Length = 1195 Score = 139 bits (70), Expect = 7e-30 Identities = 228/283 (80%), Gaps = 2/283 (0%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 815 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 756 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 755 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 696 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 695 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 636 Query: 268 ccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacan 327 ||| ||| |||||||||||||| ||||||| |||| || || |||| ||| ||||| | Sbjct: 635 cctccagggtgatggtcttgccagtcaggg-tcttcacgaagatctgcatgccacc-cct 578 Query: 328 aaggcggagcaccaggtggagggtngactccttntggatgttg 370 || ||||| |||||||| ||||| ||||| || ||||||||| Sbjct: 577 cagacggaggaccaggtgcagggttgactctttctggatgttg 535 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | || |||||||||| || Sbjct: 567 accaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggccatcttcc 508 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 507 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 448 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 447 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 388 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 387 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 330 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 329 gggttgactccttctggatgttg 307 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 1023 accaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggccatcttct 964 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 963 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 904 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 903 atcttggccttcacattctcgatggtgtcactgggctccacctccaaggtgatggtcttg 844 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 843 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 786 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 785 gggttgactccttctggatgttg 763 Score = 119 bits (60), Expect = 7e-24 Identities = 171/211 (81%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 359 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 300 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 299 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 240 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 239 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 180 Query: 268 ccttcagtgtgatggtcttgcccgtcagggt 298 ||| || |||||||||||||| |||||||| Sbjct: 179 cctctagggtgatggtcttgccggtcagggt 149
>gb|AY099137.1| Cercomonas edax isolate pub9 polyubiquitin gene, partial cds Length = 495 Score = 139 bits (70), Expect = 7e-30 Identities = 104/117 (88%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||||||||| |||| |||||||||||||| ||| | || |||||||| | || Sbjct: 388 gcacaaggtgaagggtcgactccttctggatgttgtagtcagccagggtgcggccgtcct 329 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgt 222 |||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||| Sbjct: 328 cgagctgcttgccggcgaaaatgaggcgctgctgatccggggggatgccctccttgt 272
>gb|AF285162.1| Mus musculus cell-line C3H/RV polyubiquitin C (Ubc) gene, complete cds Length = 4212 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 3959 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 3900 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 3899 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 3840 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 3839 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 3780 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 3779 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 3722 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 3721 gggtggactctttctggatgttg 3699 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 3503 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 3444 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 3443 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 3384 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 3383 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 3324 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 3323 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 3266 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 3265 gggtggactctttctggatgttg 3243 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 3275 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 3216 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 3215 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 3156 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 3155 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 3096 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 3095 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 3038 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 3037 gggtggactctttctggatgttg 3015 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 3047 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 2988 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 2987 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 2928 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 2927 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 2868 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||||| || || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 2867 cctgtcagggtt-ttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 2810 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 2809 gggtggactctttctggatgttg 2787 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 2591 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 2532 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 2531 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 2472 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 2471 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 2412 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||||| || || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 2411 cctgtcagggtt-ttcacaaagatctgcatcccacctc-tgaggcgaaggaccaggtgca 2354 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 2353 gggtggactctttctggatgttg 2331 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 2363 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 2304 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 2303 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 2244 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 2243 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 2184 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 2183 cctgtcaggg-tcttcacaaagatctgcatcccacctc-tgaggcgaaggaccaggtgca 2126 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 2125 gggtggactctttctggatgttg 2103 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1907 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1848 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1847 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1788 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1787 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 1728 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1727 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 1670 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 1669 gggtggactctttctggatgttg 1647 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 3731 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 3672 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 3671 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 3612 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||| ||| Sbjct: 3611 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggttttg 3552 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 3551 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 3494 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 3493 gggtggactctttctggatgttg 3471 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 2819 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 2760 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || | |||||||| ||||| |||| Sbjct: 2759 agctgcttgcctgcaaagatcagcctctgctggtcaggggagatgccctccttgtcctgg 2700 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 2699 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 2640 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 2639 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 2582 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 2581 gggtggactctttctggatgttg 2559 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || ||||||||| || Sbjct: 2135 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccaccttcc 2076 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 2075 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 2016 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 2015 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggtcttg 1956 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1955 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 1898 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 1897 gggtggactctttctggatgttg 1875 Score = 109 bits (55), Expect = 6e-21 Identities = 146/179 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1679 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1620 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1619 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1560 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 1559 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggtctt 1501 Score = 50.1 bits (25), Expect = 0.005 Identities = 78/95 (82%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 276 gtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcgga 335 |||||||||||||| ||||||| |||| || || |||| ||| ||||| | ||||| | Sbjct: 4019 gtgatggtcttgcctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaa 3962 Query: 336 gcaccaggtggagggtngactccttntggatgttg 370 | |||||||| ||||| ||||| || ||||||||| Sbjct: 3961 ggaccaggtgcagggtggactctttctggatgttg 3927
>ref|XR_004579.1| PREDICTED: Mus musculus gene model 1821, (NCBI) (Gm1821), misc RNA Length = 977 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | || |||||||||| || Sbjct: 542 accaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggccatcttcc 483 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 482 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 423 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 422 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 363 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | || ||||| |||||||| | Sbjct: 362 ccggtcaggg-tcttcacgaagatctgcatgccacc-cctcagacggaggaccaggtgca 305 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 304 gggttgactccttctggatgttg 282 Score = 125 bits (63), Expect = 1e-25 Identities = 157/191 (82%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 770 accaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggccatcttct 711 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 710 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 651 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 650 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 591 Query: 288 cccgtcagggt 298 || |||||||| Sbjct: 590 ccagtcagggt 580 Score = 117 bits (59), Expect = 3e-23 Identities = 156/191 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| || | || |||||||||| || Sbjct: 314 accaggtgcagggttgactccttctggatgttgtaatcagagagggtgcggccatcttcc 255 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 254 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 195 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| || |||||||||||| Sbjct: 194 atcttggccttcacgttctcgatggtgtcactgggctccacctctagggtgatggtcttg 135 Query: 288 cccgtcagggt 298 || |||||||| Sbjct: 134 ccggtcagggt 124
>ref|XM_973010.1| PREDICTED: Mus musculus ubiquitin C (Ubc), mRNA Length = 2310 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 2127 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 2068 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 2067 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 2008 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 2007 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 1948 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1947 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 1890 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 1889 gggtggactctttctggatgttg 1867 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1443 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1384 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1383 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1324 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1323 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 1264 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1263 cctgtcaggg-tcttcacaaagatctgcatcccacctc-tgaggcgaaggaccaggtgca 1206 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 1205 gggtggactctttctggatgttg 1183 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1215 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1156 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1155 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1096 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1095 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 1036 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1035 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 978 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 977 gggtggactctttctggatgttg 955 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 987 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 928 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 927 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 868 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 867 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 808 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||| ||| | Sbjct: 807 cctgtcaggg-tcttcacaaagatctgcatcccacctc-tgaggcgaaggaccaagtgca 750 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 749 gggtggactctttctggatgttg 727 Score = 127 bits (64), Expect = 3e-26 Identities = 205/254 (80%), Gaps = 2/254 (0%) Strand = Plus / Minus Query: 117 agggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttg 176 ||||| |||| ||||||||||||| ||||| || |||||||||| || ||||||||| Sbjct: 1662 agggtggactctttctggatgttgtagtctgacagggtgcggccatcttccagctgcttg 1603 Query: 177 ccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgcc 236 || || || || || | ||||||||| || |||||||||| ||||| ||||||||| ||| Sbjct: 1602 cctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctggatctttgcc 1543 Query: 237 ttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagg 296 ||||| || || |||||| || || || |||| ||| |||||||||||||| |||||| Sbjct: 1542 ttgacattctcaatggtgtcactgggctcgacctccagggtgatggtcttgcctgtcagg 1483 Query: 297 gttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggagggtngact 356 | |||| || || |||| ||| ||||| | ||||| || |||||||| ||||| |||| Sbjct: 1482 g-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgcagggtggact 1425 Query: 357 ccttntggatgttg 370 | || ||||||||| Sbjct: 1424 ctttctggatgttg 1411 Score = 117 bits (59), Expect = 3e-23 Identities = 156/191 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1899 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1840 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1839 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1780 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||| ||| Sbjct: 1779 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggttttg 1720 Query: 288 cccgtcagggt 298 || |||||||| Sbjct: 1719 cctgtcagggt 1709 Score = 93.7 bits (47), Expect = 4e-16 Identities = 153/191 (80%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||| ||| ||||| |||| ||||||||||||| | ||| || |||||||||| || Sbjct: 759 accaagtgcagggtggactctttctggatgttgtagcctgacagggtgcggccatcttcc 700 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| ||| Sbjct: 699 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctga 640 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||| | || || || |||| ||| |||||||||||| Sbjct: 639 atctttgccttgacattctctatggagtcactgggctcgacctccagggtgatggtcttg 580 Query: 288 cccgtcagggt 298 || |||||||| Sbjct: 579 cctgtcagggt 569 Score = 50.1 bits (25), Expect = 0.005 Identities = 78/95 (82%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 276 gtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcgga 335 |||||||||||||| ||||||| |||| || || |||| ||| ||||| | ||||| | Sbjct: 2187 gtgatggtcttgcctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaa 2130 Query: 336 gcaccaggtggagggtngactccttntggatgttg 370 | |||||||| ||||| ||||| || ||||||||| Sbjct: 2129 ggaccaggtgcagggtggactctttctggatgttg 2095
>ref|XM_001001919.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 3 (Ubc), mRNA Length = 794 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 758 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 699 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 698 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 639 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 638 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 579 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 578 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 521 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 520 gggtggactctttctggatgttg 498 Score = 109 bits (55), Expect = 6e-21 Identities = 146/179 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 530 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 471 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 470 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 411 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 410 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggtctt 352
>ref|XM_001001949.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 8 (Ubc), mRNA Length = 1354 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1090 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1031 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1030 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 971 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 970 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 911 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 910 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 853 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 852 gggtggactctttctggatgttg 830 Score = 109 bits (55), Expect = 6e-21 Identities = 146/179 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 862 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 803 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 802 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 743 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 742 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtctt 684 Score = 50.1 bits (25), Expect = 0.005 Identities = 78/95 (82%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 276 gtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcgga 335 |||||||||||||| ||||||| |||| || || |||| ||| ||||| | ||||| | Sbjct: 1150 gtgatggtcttgcctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaa 1093 Query: 336 gcaccaggtggagggtngactccttntggatgttg 370 | |||||||| ||||| ||||| || ||||||||| Sbjct: 1092 ggaccaggtgcagggtggactctttctggatgttg 1058
>ref|XM_001001988.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 4 (Ubc), mRNA Length = 1250 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 986 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 927 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 926 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 867 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 866 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 807 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 806 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 749 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 748 gggtggactctttctggatgttg 726 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 758 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 699 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 698 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 639 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 638 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 579 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 578 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 521 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 520 gggtggactctttctggatgttg 498 Score = 109 bits (55), Expect = 6e-21 Identities = 146/179 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 530 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 471 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 470 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 411 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 410 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtctt 352 Score = 50.1 bits (25), Expect = 0.005 Identities = 78/95 (82%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 276 gtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcgga 335 |||||||||||||| ||||||| |||| || || |||| ||| ||||| | ||||| | Sbjct: 1046 gtgatggtcttgcctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaa 989 Query: 336 gcaccaggtggagggtngactccttntggatgttg 370 | |||||||| ||||| ||||| || ||||||||| Sbjct: 988 ggaccaggtgcagggtggactctttctggatgttg 954
>ref|XM_001002029.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 18 (Ubc), mRNA Length = 2266 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 2002 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1943 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1942 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1883 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1882 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 1823 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1822 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 1765 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 1764 gggtggactctttctggatgttg 1742 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1774 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1715 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1714 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1655 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1654 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 1595 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1594 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 1537 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 1536 gggtggactctttctggatgttg 1514 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1546 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1487 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1486 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1427 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1426 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 1367 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1366 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 1309 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 1308 gggtggactctttctggatgttg 1286 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1090 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1031 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1030 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 971 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 970 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 911 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 910 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 853 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 852 gggtggactctttctggatgttg 830 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1318 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1259 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | |||||| || || |||||||||| ||||| |||| Sbjct: 1258 agctgcttgcctgcaaagatcagcctctgctgatcaggggggatgccctccttgtcctgg 1199 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1198 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 1139 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1138 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 1081 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 1080 gggtggactctttctggatgttg 1058 Score = 109 bits (55), Expect = 6e-21 Identities = 146/179 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 862 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 803 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 802 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 743 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 742 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtctt 684 Score = 50.1 bits (25), Expect = 0.005 Identities = 78/95 (82%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 276 gtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcgga 335 |||||||||||||| ||||||| |||| || || |||| ||| ||||| | ||||| | Sbjct: 2062 gtgatggtcttgcctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaa 2005 Query: 336 gcaccaggtggagggtngactccttntggatgttg 370 | |||||||| ||||| ||||| || ||||||||| Sbjct: 2004 ggaccaggtgcagggtggactctttctggatgttg 1970
>ref|XM_001002019.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 25 (Ubc), mRNA Length = 1676 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1412 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1353 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1352 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1293 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1292 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 1233 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1232 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 1175 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 1174 gggtggactctttctggatgttg 1152 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1184 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1125 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1124 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1065 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1064 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 1005 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1004 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 947 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 946 gggtggactctttctggatgttg 924 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 956 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 897 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 896 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 837 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 836 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 777 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 776 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 719 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 718 gggtggactctttctggatgttg 696 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 500 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 441 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 440 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 381 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 380 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 321 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 320 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 263 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 262 gggtggactctttctggatgttg 240 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 728 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 669 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | |||||| || || |||||||||| ||||| |||| Sbjct: 668 agctgcttgcctgcaaagatcagcctctgctgatcaggggggatgccctccttgtcctgg 609 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 608 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 549 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 548 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 491 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 490 gggtggactctttctggatgttg 468 Score = 109 bits (55), Expect = 6e-21 Identities = 146/179 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 272 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 213 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 212 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 153 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 152 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtctt 94 Score = 50.1 bits (25), Expect = 0.005 Identities = 78/95 (82%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 276 gtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcgga 335 |||||||||||||| ||||||| |||| || || |||| ||| ||||| | ||||| | Sbjct: 1472 gtgatggtcttgcctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaa 1415 Query: 336 gcaccaggtggagggtngactccttntggatgttg 370 | |||||||| ||||| ||||| || ||||||||| Sbjct: 1414 ggaccaggtgcagggtggactctttctggatgttg 1380
>ref|XM_001002053.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 22 (Ubc), mRNA Length = 1931 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1667 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1608 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1607 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1548 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1547 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 1488 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1487 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 1430 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 1429 gggtggactctttctggatgttg 1407 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1439 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1380 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1379 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1320 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1319 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 1260 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1259 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 1202 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 1201 gggtggactctttctggatgttg 1179 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1211 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1152 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1151 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1092 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1091 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 1032 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1031 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 974 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 973 gggtggactctttctggatgttg 951 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 755 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 696 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 695 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 636 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 635 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 576 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 575 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 518 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 517 gggtggactctttctggatgttg 495 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 527 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 468 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 467 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 408 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 407 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 348 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 347 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 290 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 289 gggtggactctttctggatgttg 267 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 983 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 924 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | |||||| || || |||||||||| ||||| |||| Sbjct: 923 agctgcttgcctgcaaagatcagcctctgctgatcaggggggatgccctccttgtcctgg 864 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 863 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 804 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 803 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 746 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 745 gggtggactctttctggatgttg 723 Score = 109 bits (55), Expect = 6e-21 Identities = 146/179 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 299 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 240 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 239 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 180 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 179 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggtctt 121 Score = 50.1 bits (25), Expect = 0.005 Identities = 78/95 (82%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 276 gtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcgga 335 |||||||||||||| ||||||| |||| || || |||| ||| ||||| | ||||| | Sbjct: 1727 gtgatggtcttgcctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaa 1670 Query: 336 gcaccaggtggagggtngactccttntggatgttg 370 | |||||||| ||||| ||||| || ||||||||| Sbjct: 1669 ggaccaggtgcagggtggactctttctggatgttg 1635
>ref|XM_001002045.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 29 (Ubc), mRNA Length = 2494 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 2230 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 2171 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 2170 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 2111 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 2110 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 2051 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 2050 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 1993 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 1992 gggtggactctttctggatgttg 1970 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 2002 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1943 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1942 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1883 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1882 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 1823 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1822 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 1765 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 1764 gggtggactctttctggatgttg 1742 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1774 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1715 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1714 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1655 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1654 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 1595 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1594 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 1537 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 1536 gggtggactctttctggatgttg 1514 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1318 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1259 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1258 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1199 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1198 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 1139 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1138 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 1081 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 1080 gggtggactctttctggatgttg 1058 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1090 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1031 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1030 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 971 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 970 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 911 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 910 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 853 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 852 gggtggactctttctggatgttg 830 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1546 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1487 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | |||||| || || |||||||||| ||||| |||| Sbjct: 1486 agctgcttgcctgcaaagatcagcctctgctgatcaggggggatgccctccttgtcctgg 1427 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1426 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 1367 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1366 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 1309 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 1308 gggtggactctttctggatgttg 1286 Score = 109 bits (55), Expect = 6e-21 Identities = 146/179 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 862 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 803 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 802 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 743 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 742 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggtctt 684 Score = 50.1 bits (25), Expect = 0.005 Identities = 78/95 (82%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 276 gtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcgga 335 |||||||||||||| ||||||| |||| || || |||| ||| ||||| | ||||| | Sbjct: 2290 gtgatggtcttgcctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaa 2233 Query: 336 gcaccaggtggagggtngactccttntggatgttg 370 | |||||||| ||||| ||||| || ||||||||| Sbjct: 2232 ggaccaggtgcagggtggactctttctggatgttg 2198
>ref|XM_391117.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG10941.1) partial mRNA Length = 465 Score = 137 bits (69), Expect = 3e-29 Identities = 173/210 (82%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||| ||||||||| |||| |||||||||||||| ||| || |||||||||| |||| Sbjct: 209 accaagtgaagggtggactccttctggatgttgtagtcgctcagggtgcggccatcctcg 150 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||| || || || || || |||||||||||||| ||||| |||| ||||| |||| Sbjct: 149 agctgcttaccagcaaagataagtcgctgctggtccggggggataccctccttgtcctgg 90 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| | |||||||||||| |||||| | || |||| ||||| || ||||| ||||| Sbjct: 89 atcttggacttgacgttgtcaatggtgtcggaagactccacctcaagggtgatcgtcttc 30 Query: 288 cccgtcagggttcttgacnaanatctncat 317 ||||| |||| ||||||| || |||| ||| Sbjct: 29 cccgtgaggg-tcttgacgaaaatctgcat 1
>gb|BC008661.1| Mus musculus ubiquitin C, mRNA (cDNA clone IMAGE:3598724), complete cds Length = 777 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 509 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 450 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 449 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 390 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 389 atcttagccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 330 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 329 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 272 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 271 gggtggactctttctggatgttg 249 Score = 109 bits (55), Expect = 6e-21 Identities = 146/179 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 281 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 222 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 221 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 162 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 161 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggtctt 103 Score = 50.1 bits (25), Expect = 0.005 Identities = 78/95 (82%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 276 gtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcgga 335 |||||||||||||| ||||||| |||| || || |||| ||| ||||| | ||||| | Sbjct: 569 gtgatggtcttgcctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaa 512 Query: 336 gcaccaggtggagggtngactccttntggatgttg 370 | |||||||| ||||| ||||| || ||||||||| Sbjct: 511 ggaccaggtgcagggtggactctttctggatgttg 477
>gb|BC025894.1| Mus musculus ubiquitin C, mRNA (cDNA clone IMAGE:5055216), complete cds Length = 1213 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 946 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 887 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 886 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 827 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 826 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 767 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 766 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 709 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 708 gggtggactctttctggatgttg 686 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 490 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 431 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 430 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 371 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 370 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 311 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 310 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 253 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 252 gggtggactctttctggatgttg 230 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 718 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 659 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 658 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 599 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||| ||| Sbjct: 598 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggttttg 539 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 538 cctgtcaggg-tcttcacaaagatctgcatcccacctc-tgaggcgaaggaccaggtgca 481 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 480 gggtggactctttctggatgttg 458 Score = 109 bits (55), Expect = 6e-21 Identities = 146/179 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 262 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 203 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 202 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 143 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 142 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggtctt 84 Score = 50.1 bits (25), Expect = 0.005 Identities = 78/95 (82%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 276 gtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcgga 335 |||||||||||||| ||||||| |||| || || |||| ||| ||||| | ||||| | Sbjct: 1006 gtgatggtcttgcctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaa 949 Query: 336 gcaccaggtggagggtngactccttntggatgttg 370 | |||||||| ||||| ||||| || ||||||||| Sbjct: 948 ggaccaggtgcagggtggactctttctggatgttg 914
>gb|BC036303.1| Mus musculus ubiquitin C, mRNA (cDNA clone IMAGE:2645223), complete cds Length = 1193 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 698 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 639 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 638 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 579 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 578 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggtcttg 519 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 518 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 461 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 460 gggtggactctttctggatgttg 438 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 470 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 411 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 410 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 351 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 350 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggtcttg 291 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 290 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 233 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 232 gggtggactctttctggatgttg 210 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 926 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 867 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 866 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 807 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| ||||| |||||| Sbjct: 806 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatagtcttg 747 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 746 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 689 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 688 gggtggactctttctggatgttg 666 Score = 109 bits (55), Expect = 6e-21 Identities = 146/179 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 242 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 183 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 182 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 123 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 122 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggtctt 64 Score = 50.1 bits (25), Expect = 0.005 Identities = 78/95 (82%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 276 gtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcgga 335 |||||||||||||| ||||||| |||| || || |||| ||| ||||| | ||||| | Sbjct: 986 gtgatggtcttgcctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaa 929 Query: 336 gcaccaggtggagggtngactccttntggatgttg 370 | |||||||| ||||| ||||| || ||||||||| Sbjct: 928 ggaccaggtgcagggtggactctttctggatgttg 894
>gb|BC021837.1| Mus musculus ubiquitin C, mRNA (cDNA clone MGC:30231 IMAGE:5123918), complete cds Length = 2120 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1853 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1794 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1793 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1734 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1733 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 1674 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1673 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 1616 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 1615 gggtggactctttctggatgttg 1593 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1169 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1110 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1109 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1050 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1049 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 990 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 989 cctgtcaggg-tcttcacaaagatctgcatcccacctc-tgaggcgaaggaccaggtgca 932 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 931 gggtggactctttctggatgttg 909 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 941 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 882 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 881 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 822 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 821 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 762 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 761 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 704 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 703 gggtggactctttctggatgttg 681 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 713 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 654 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 653 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 594 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 593 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 534 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 533 cctgtcaggg-tcttcacaaagatctgcatcccacctc-tgaggcgaaggaccaggtgca 476 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 475 gggtggactctttctggatgttg 453 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 485 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 426 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 425 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 366 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 365 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 306 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 305 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 248 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 247 gggtggactctttctggatgttg 225 Score = 127 bits (64), Expect = 3e-26 Identities = 205/254 (80%), Gaps = 2/254 (0%) Strand = Plus / Minus Query: 117 agggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttg 176 ||||| |||| ||||||||||||| ||||| || |||||||||| || ||||||||| Sbjct: 1388 agggtggactctttctggatgttgtagtctgacagggtgcggccatcttccagctgcttg 1329 Query: 177 ccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgcc 236 || || || || || | ||||||||| || |||||||||| ||||| ||||||||| ||| Sbjct: 1328 cctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctggatctttgcc 1269 Query: 237 ttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagg 296 ||||| || || |||||| || || || |||| ||| |||||||||||||| |||||| Sbjct: 1268 ttgacattctcaatggtgtcactgggctcgacctccagggtgatggtcttgcctgtcagg 1209 Query: 297 gttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggagggtngact 356 | |||| || || |||| ||| ||||| | ||||| || |||||||| ||||| |||| Sbjct: 1208 g-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgcagggtggact 1151 Query: 357 ccttntggatgttg 370 | || ||||||||| Sbjct: 1150 ctttctggatgttg 1137 Score = 117 bits (59), Expect = 3e-23 Identities = 156/191 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1625 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1566 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1565 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1506 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||| ||| Sbjct: 1505 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggttttg 1446 Query: 288 cccgtcagggt 298 || |||||||| Sbjct: 1445 cctgtcagggt 1435 Score = 109 bits (55), Expect = 6e-21 Identities = 146/179 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 257 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 198 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 197 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 138 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 137 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggtctt 79 Score = 50.1 bits (25), Expect = 0.005 Identities = 78/95 (82%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 276 gtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcgga 335 |||||||||||||| ||||||| |||| || || |||| ||| ||||| | ||||| | Sbjct: 1913 gtgatggtcttgcctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaa 1856 Query: 336 gcaccaggtggagggtngactccttntggatgttg 370 | |||||||| ||||| ||||| || ||||||||| Sbjct: 1855 ggaccaggtgcagggtggactctttctggatgttg 1821
>gb|BC006680.1| Mus musculus ubiquitin C, mRNA (cDNA clone MGC:7811 IMAGE:3500023), complete cds Length = 1891 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1170 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1111 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1110 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1051 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1050 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 991 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 990 cctgtcaggg-tcttcacaaagatctgcatcccacctc-tgaggcgaaggaccaggtgca 933 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 932 gggtggactctttctggatgttg 910 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 942 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 883 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 882 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 823 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 822 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 763 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 762 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 705 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 704 gggtggactctttctggatgttg 682 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 714 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 655 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 654 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 595 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 594 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 535 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 534 cctgtcaggg-tcttcacaaagatctgcatcccacctc-tgaggcgaaggaccaggtgca 477 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 476 gggtggactctttctggatgttg 454 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 486 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 427 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 426 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 367 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 366 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 307 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 306 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 249 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 248 gggtggactctttctggatgttg 226 Score = 127 bits (64), Expect = 3e-26 Identities = 205/254 (80%), Gaps = 2/254 (0%) Strand = Plus / Minus Query: 117 agggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttg 176 ||||| |||| ||||||||||||| ||||| || |||||||||| || ||||||||| Sbjct: 1389 agggtggactctttctggatgttgtagtctgacagggtgcggccatcttccagctgcttg 1330 Query: 177 ccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgcc 236 || || || || || | ||||||||| || |||||||||| ||||| ||||||||| ||| Sbjct: 1329 cctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctggatctttgcc 1270 Query: 237 ttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagg 296 ||||| || || |||||| || || || |||| ||| |||||||||||||| |||||| Sbjct: 1269 ttgacattctcaatggtgtcactgggctcgacctccagggtgatggtcttgcctgtcagg 1210 Query: 297 gttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggagggtngact 356 | |||| || || |||| ||| ||||| | ||||| || |||||||| ||||| |||| Sbjct: 1209 g-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgcagggtggact 1152 Query: 357 ccttntggatgttg 370 | || ||||||||| Sbjct: 1151 ctttctggatgttg 1138 Score = 117 bits (59), Expect = 3e-23 Identities = 156/191 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1626 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1567 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1566 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1507 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||| ||| Sbjct: 1506 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggttttg 1447 Query: 288 cccgtcagggt 298 || |||||||| Sbjct: 1446 cctgtcagggt 1436 Score = 109 bits (55), Expect = 6e-21 Identities = 146/179 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 258 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 199 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 198 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 139 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 138 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggtctt 80 Score = 50.1 bits (25), Expect = 0.005 Identities = 78/95 (82%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 276 gtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcgga 335 |||||||||||||| ||||||| |||| || || |||| ||| ||||| | ||||| | Sbjct: 1686 gtgatggtcttgcctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaa 1629 Query: 336 gcaccaggtggagggtngactccttntggatgttg 370 | |||||||| ||||| ||||| || ||||||||| Sbjct: 1628 ggaccaggtgcagggtggactctttctggatgttg 1594
>emb|AJ223329.1|NTAJ3329 Nicotiana tabacum TUQG3 gene, complete CDS Length = 1918 Score = 137 bits (69), Expect = 3e-29 Identities = 148/177 (83%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||||| || | ||||| || |||| ||||||||| || |||||| Sbjct: 1304 gactccttctggatgttgtaatcagctagagttcgaccatcctcgagctgttttccggcg 1245 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 ||||| || |||||||||||||| |||||||| | ||||| ||||||||| ||||| ||| Sbjct: 1244 aaaattagccgctgctggtccggtgggatgccttccttgtcctggatctttgccttcacg 1185 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggtt 299 |||||||| ||| | ||||| | |||| || ||||||||||| |||||||||||| Sbjct: 1184 ttgtcgattgtgtcggaggattcgacctcaagggtgatggtcttacccgtcagggtt 1128
>gb|AY225193.1| Camelus dromedarius polyubiquitin gene, partial cds Length = 325 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| || | ||||||||||||| || Sbjct: 323 accaggtgcagggtcgactccttctggatgttgtaatcagaaagagtgcggccatcttcc 264 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| ||||| || | | ||||||||| ||||||||||| | ||| | |||| Sbjct: 263 agctgcttgcctgcgaagatcaacctctgctggtcaggagggatgccttccttatcctgg 204 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| | | || ||||| ||| |||||||||||| Sbjct: 203 atcttggccttcacgttctcgatggtgtcgctaggctccacctccagggtgatggtcttg 144 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 143 ccagtcaggg-tcttcacgaagatctgcataccacc-cctcagacgcaggaccaggtgca 86 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 85 gggtcgactccttctggatgttg 63 Score = 61.9 bits (31), Expect = 1e-06 Identities = 60/71 (84%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| || | ||||||||||||| || Sbjct: 95 accaggtgcagggtcgactccttctggatgttgtaatcagaaagagtgcggccatcttcc 36 Query: 168 agctgcttgcc 178 ||||||||||| Sbjct: 35 agctgcttgcc 25
>dbj|AB226314.1| Aspergillus oryzae cDNA, contig sequence: AoEST3176 Length = 955 Score = 137 bits (69), Expect = 3e-29 Identities = 187/229 (81%), Gaps = 1/229 (0%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 ||||||||||||| |||| ||||||||||| |||| |||||||||||||| ||| | Sbjct: 516 ccaccacgcaggcggagcacgaggtgaagggtggactccttctggatgttgtagtcagaa 457 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 ||||| ||||| | ||||||||||||||| ||||| || || ||||||||||| || ||| Sbjct: 456 agagtacggccgtcctcgagctgcttgccagcgaagatcagacgctgctggtcagggggg 397 Query: 210 atgccctnctt-gtnctggatcttcgccttgacgttgtcgatggtgncagaggactncac 268 || |||| ||| | ||||||||| | |||||| ||||| |||||| | || |||| ||| Sbjct: 396 attccctccttggcgctggatcttggacttgacattgtcaatggtgtccgaagactccac 337 Query: 269 cttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncat 317 || || ||||| ||||| ||||| |||| ||||||| || |||| ||| Sbjct: 336 ctcgagggtgatagtcttacccgtaaggggtcttgacgaagatctgcat 288 Score = 56.0 bits (28), Expect = 8e-05 Identities = 38/42 (90%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||||||||| ||||| ||||| |||||||| ||||||||| Sbjct: 507 aggcggagcacgaggtgaagggtggactccttctggatgttg 466
>dbj|AK168448.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920021C12 product:ubiquitin C, full insert sequence Length = 980 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 727 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 668 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 667 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 608 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 607 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 548 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 547 cctgtcaggg-tcttcacaaagatctgcatcccacctc-tgaggcgaaggaccaggtgca 490 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 489 gggtggactctttctggatgttg 467 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 499 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 440 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 439 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 380 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 379 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 320 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 319 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 262 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 261 gggtggactctttctggatgttg 239 Score = 109 bits (55), Expect = 6e-21 Identities = 146/179 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 271 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 212 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 211 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 152 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 151 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggtctt 93 Score = 50.1 bits (25), Expect = 0.005 Identities = 78/95 (82%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 276 gtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcgga 335 |||||||||||||| ||||||| |||| || || |||| ||| ||||| | ||||| | Sbjct: 787 gtgatggtcttgcctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaa 730 Query: 336 gcaccaggtggagggtngactccttntggatgttg 370 | |||||||| ||||| ||||| || ||||||||| Sbjct: 729 ggaccaggtgcagggtggactctttctggatgttg 695
>dbj|AK010964.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510015A11 product:POLYUBIQUITIN (UBIQUITIN B) homolog [Mus musculus], full insert sequence Length = 1208 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 499 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 440 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 439 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 380 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 379 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 320 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 319 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 262 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 261 gggtggactctttctggatgttg 239 Score = 127 bits (64), Expect = 3e-26 Identities = 205/254 (80%), Gaps = 2/254 (0%) Strand = Plus / Minus Query: 117 agggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttg 176 ||||| |||| ||||||||||||| ||||| || |||||||||| || ||||||||| Sbjct: 718 agggtggactctttctggatgttgtagtctgacagggtgcggccatcttccagctgcttg 659 Query: 177 ccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgcc 236 || || || || || | ||||||||| || |||||||||| ||||| ||||||||| ||| Sbjct: 658 cctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctggatctttgcc 599 Query: 237 ttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagg 296 ||||| || || |||||| || || || |||| ||| |||||||||||||| |||||| Sbjct: 598 ttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttgcctgtcagg 539 Query: 297 gttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggagggtngact 356 | |||| || || |||| ||| ||||| | ||||| || |||||||| ||||| |||| Sbjct: 538 g-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgcagggtggact 481 Query: 357 ccttntggatgttg 370 | || ||||||||| Sbjct: 480 ctttctggatgttg 467 Score = 117 bits (59), Expect = 3e-23 Identities = 156/191 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 955 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 896 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 895 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 836 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||| ||| Sbjct: 835 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggttttg 776 Query: 288 cccgtcagggt 298 || |||||||| Sbjct: 775 cctgtcagggt 765 Score = 109 bits (55), Expect = 6e-21 Identities = 146/179 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 271 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 212 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 211 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 152 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 151 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggtctt 93 Score = 50.1 bits (25), Expect = 0.005 Identities = 78/95 (82%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 276 gtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcgga 335 |||||||||||||| ||||||| |||| || || |||| ||| ||||| | ||||| | Sbjct: 1015 gtgatggtcttgcctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaa 958 Query: 336 gcaccaggtggagggtngactccttntggatgttg 370 | |||||||| ||||| ||||| || ||||||||| Sbjct: 957 ggaccaggtgcagggtggactctttctggatgttg 923
>dbj|AK012443.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700055N04 product:ubiquitin B, full insert sequence Length = 1166 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | || |||||||||| || Sbjct: 537 accaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggccatcttcc 478 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 477 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 418 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 417 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 358 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 357 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 300 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 299 gggttgactccttctggatgttg 277 Score = 131 bits (66), Expect = 2e-27 Identities = 227/283 (80%), Gaps = 2/283 (0%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 785 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 726 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 725 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 666 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 665 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 606 Query: 268 ccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacan 327 ||| ||| |||||||||||||| ||||||| |||| || || |||| ||| ||||| | Sbjct: 605 cctccagggtgatggtcttgccagtcaggg-tcttcacgaagatctgcatgccacc-cct 548 Query: 328 aaggcggagcaccaggtggagggtngactccttntggatgttg 370 || |||| |||||||| ||||| ||||| || ||||||||| Sbjct: 547 cagacggaagaccaggtgcagggttgactctttctggatgttg 505 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 993 accaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggccatcttct 934 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 933 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 874 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 873 atcttggccttcacattctcgatggtgtcactgggctccacctccaaggtgatggtcttg 814 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 813 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 756 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 755 gggttgactccttctggatgttg 733 Score = 119 bits (60), Expect = 7e-24 Identities = 171/211 (81%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 329 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 270 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 269 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 210 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 209 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 150 Query: 268 ccttcagtgtgatggtcttgcccgtcagggt 298 ||| || |||||||||||||| |||||||| Sbjct: 149 cctctagggtgatggtcttgccggtcagggt 119
>dbj|AK012427.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700054O04 product:ubiquitin, beta-galactosidase related, full insert sequence Length = 1903 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 963 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 904 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 903 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 844 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 843 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 784 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 783 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 726 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 725 gggtggactctttctggatgttg 703 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 735 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 676 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 675 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 616 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 615 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 556 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 555 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 498 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 497 gggtggactctttctggatgttg 475 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 277 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 218 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 217 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 158 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 157 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 98 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 97 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 40 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 39 gggtggactctttctggatgttg 17 Score = 125 bits (63), Expect = 1e-25 Identities = 157/191 (82%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1651 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1592 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1591 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1532 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1531 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 1472 Query: 288 cccgtcagggt 298 || |||||||| Sbjct: 1471 cctgtcagggt 1461 Score = 111 bits (56), Expect = 2e-21 Identities = 157/192 (81%), Gaps = 1/192 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1422 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1363 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1362 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1303 Query: 228 atcttcgccttgac-gttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 1302 atctttgccttgacatttctctatggtgtcactgggctcgacctccagggtgatggtctt 1243 Query: 287 gcccgtcagggt 298 ||| |||||||| Sbjct: 1242 gcctgtcagggt 1231 Score = 111 bits (56), Expect = 2e-21 Identities = 196/243 (80%), Gaps = 3/243 (1%) Strand = Plus / Minus Query: 129 ttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaatg 188 ||||||||||||| ||||| || |||||||||| || ||||||||||| || || || Sbjct: 1171 ttctggatgttgtagtctgacagggtgcggccatcttccagctgcttgcctgcaaagatc 1112 Query: 189 aggcgctgctggtccggagggatgccctncttgt-nctggatcttcgccttgacgttgtc 247 || | ||||||||| || |||||||||| ||||| ||||||||| |||||||| || || Sbjct: 1111 agcctctgctggtcaggggggatgccctccttgtccctggatctttgccttgacattctc 1052 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacna 307 |||||| || || || |||| ||| |||||||||||||| ||||||| |||| || | Sbjct: 1051 tatggtgtcactgggctcgacctccagggtgatggtcttgcctgtcaggg-tcttcacaa 993 Query: 308 anatctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatg 367 | |||| ||| ||||| | ||||| || |||||||| ||||| ||||| || |||||| Sbjct: 992 agatctgcatgccacctc-tgaggcgaaggaccaggtgcagggtggactctttctggatg 934 Query: 368 ttg 370 ||| Sbjct: 933 ttg 931 Score = 111 bits (56), Expect = 2e-21 Identities = 157/192 (81%), Gaps = 1/192 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 507 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 448 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatg-ccctncttgtnctg 226 ||||||||||| || || || || | ||||||||| || |||||| |||| ||||| ||| Sbjct: 447 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgcccctccttgtcctg 388 Query: 227 gatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 |||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 387 gatctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtctt 328 Query: 287 gcccgtcagggt 298 ||| |||||||| Sbjct: 327 gcctgtcagggt 316 Score = 93.7 bits (47), Expect = 4e-16 Identities = 193/242 (79%), Gaps = 3/242 (1%) Strand = Plus / Minus Query: 129 ttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaatg 188 ||||||||||||| ||||| || |||||||||| || ||||||||||| || || || Sbjct: 1857 ttctggatgttgtagtctgacagggtgcggccatcttccagctgcttgcctgcaaagatc 1798 Query: 189 aggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtcg 248 || | ||||||||| || |||||||||| ||||| ||||||||| |||||||| || | | Sbjct: 1797 agcctctgctggtcagg-gggatgccctccttgtcctggatctttgccttgaccttcttg 1739 Query: 249 atggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacnaa 308 |||| || || || || | ||| |||||||||||||| ||||||| |||| || || Sbjct: 1738 gtggtaacactgggctcgacgtccagggtgatggtcttgcctgtcaggg-tcttcacaaa 1680 Query: 309 natctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatgt 368 |||| ||| ||||| | ||||| || |||||||| ||||| ||||| || ||||||| Sbjct: 1679 gatctgcatgccacctc-tgaggcgaaggaccaggtgcagggtggactctttctggatgt 1621 Query: 369 tg 370 || Sbjct: 1620 tg 1619 Score = 44.1 bits (22), Expect = 0.32 Identities = 35/40 (87%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctg 147 |||||||| ||||| |||| ||||||||||||| ||||| Sbjct: 49 accaggtgcagggtggactctttctggatgttgtagtctg 10
>gb|BC094012.1| Mus musculus ubiquitin C, mRNA (cDNA clone IMAGE:5037932), complete cds Length = 1209 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 714 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 655 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 654 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 595 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 594 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggtcttg 535 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 534 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 477 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 476 gggtggactctttctggatgttg 454 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 486 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 427 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 426 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 367 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 366 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggtcttg 307 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 306 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 249 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 248 gggtggactctttctggatgttg 226 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 942 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 883 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 882 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 823 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| ||||| |||||| Sbjct: 822 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatagtcttg 763 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 762 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 705 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 704 gggtggactctttctggatgttg 682 Score = 109 bits (55), Expect = 6e-21 Identities = 146/179 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 258 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 199 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 198 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 139 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 138 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtctt 80 Score = 50.1 bits (25), Expect = 0.005 Identities = 78/95 (82%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 276 gtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcgga 335 |||||||||||||| ||||||| |||| || || |||| ||| ||||| | ||||| | Sbjct: 1002 gtgatggtcttgcctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaa 945 Query: 336 gcaccaggtggagggtngactccttntggatgttg 370 | |||||||| ||||| ||||| || ||||||||| Sbjct: 944 ggaccaggtgcagggtggactctttctggatgttg 910
>gb|AC158180.2| Selaginella moellendorffii chromosome JGIASXY-5A14, complete sequence Length = 36906 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 ||||||||||| ||||||| ||| |||||||||| ||| | ||||||||||| | ||| Sbjct: 5296 accaggtgaagcgtagactccttttggatgttgtagtccgcaagagtgcggccgtcctca 5237 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| ||||| || | |||||||||||||| |||||||| | ||||| |||| Sbjct: 5236 agctgcttgcctgcgaagatcaatcgctgctggtccggggggatgccttccttgtcctgg 5177 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| | ||| ||||||||||| ||| | ||| || ||||| || ||||| ||||| Sbjct: 5176 atcttggtcttcacgttgtcgatcgtgtccgagctctccacctccaaggtgatcgtcttc 5117 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || || |||| ||||||| || || | |||||| |||| |||||| || |||| |||| Sbjct: 5116 cctgtgaggg-tcttgacgaaaatttgcatacctccac-gaaggcgaaggaccaaatgga 5059 Query: 348 gggtngactccttntggatgttg 370 | || |||||||| ||||||||| Sbjct: 5058 gcgtcgactccttctggatgttg 5036 Score = 113 bits (57), Expect = 4e-22 Identities = 201/251 (80%), Gaps = 2/251 (0%) Strand = Plus / Minus Query: 120 gtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccg 179 ||||| | ||| |||||||||| ||| | ||||| ||||||| || |||||||||||| Sbjct: 4600 gtagattccttttggatgttgtagtcggcaagagtccggccatcttctagctgcttgccg 4541 Query: 180 gcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttg 239 || || || | ||||||||||||||||||||||| | ||||| ||||||||| | ||| Sbjct: 4540 gcaaagatcaatcgctgctggtccggagggatgccttccttgtcctggatcttggtctta 4481 Query: 240 acgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggtt 299 ||||||||||| ||| | ||| || ||||| || || || ||||| ||||| |||| | Sbjct: 4480 acgttgtcgatcgtgtcggagctctccacctcgagcgtaatcgtcttccccgttaggg-t 4422 Query: 300 cttgacnaanatctncataccaccacanaaggcggagcaccaggtggagggtngactcct 359 |||||| || || | |||||| || | |||||| |||||||| || | ||| ||||||| Sbjct: 4421 cttgacgaaaatttgcatacctcctc-gaaggcgcagcaccagatgcaaggtcgactcct 4363 Query: 360 tntggatgttg 370 | ||||||||| Sbjct: 4362 tctggatgttg 4352 Score = 109 bits (55), Expect = 6e-21 Identities = 106/125 (84%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||||| || | ||||| ||||||| ||||||||||||||| ||| Sbjct: 5509 gactccttctggatgttgtaatcagcaagagtccggccatcctcgagctgcttgccagcg 5450 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || ||||| | |||||||||||| || ||||||| ||||| ||||||||| | ||| ||| Sbjct: 5449 aagatgagcctctgctggtccggtggaatgccctccttgtcctggatcttggtcttaacg 5390 Query: 243 ttgtc 247 ||||| Sbjct: 5389 ttgtc 5385 Score = 85.7 bits (43), Expect = 9e-14 Identities = 154/193 (79%), Gaps = 1/193 (0%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | ||||| ||||||| || ||||||||||| || || || Sbjct: 4820 cttctggatgttgtagtcggccagagtccggccatcttctagctgcttgcccgcaaagat 4761 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 | ||||||||||||||||| ||||| | ||||| ||||||||| | ||| |||||||| Sbjct: 4760 caaacgctgctggtccggaggaatgccttccttgtcctggatcttggtcttcacgttgtc 4701 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacna 307 || ||| | ||| || ||||| || ||||| ||||| ||||||| || ||||||| | Sbjct: 4700 aattgtgtcggagctctccacctcgagcgtgatcgtcttccccgtcaagg-tcttgacga 4642 Query: 308 anatctncatacc 320 | || | |||||| Sbjct: 4641 agatttgcatacc 4629 Score = 81.8 bits (41), Expect = 1e-12 Identities = 157/198 (79%), Gaps = 1/198 (0%) Strand = Plus / Minus Query: 123 gactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcg 182 |||| |||||||||||||| ||| | ||||| ||||||| || ||||||||||| || Sbjct: 5053 gactccttctggatgttgtagtcggccagagtccggccatcttctagctgcttgcccgca 4994 Query: 183 aaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacg 242 || || | |||||||||||||| ||||| || | ||||| ||||||||| | ||| ||| Sbjct: 4993 aagatcaaacgctgctggtccggggggataccttccttgtcctggatcttggtcttcacg 4934 Query: 243 ttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttctt 302 ||||| || ||| | ||| || ||||| || ||||| ||||| ||||||| || |||| Sbjct: 4933 ttgtcaattgtgtcggagctctccacctcgagcgtgatcgtcttccccgtcaagg-tctt 4875 Query: 303 gacnaanatctncatacc 320 ||| || || | |||||| Sbjct: 4874 gacgaagatttgcatacc 4857 Score = 77.8 bits (39), Expect = 2e-11 Identities = 105/129 (81%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 ||||||| || | ||| |||| |||||||||||||| || | || ||||| || | || Sbjct: 4386 gcaccagatgcaaggtcgactccttctggatgttgtaatccgcgagcgtgcgcccctcct 4327 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 |||||||||||||||| || || | ||||||||||||||||| || |||| ||| | || Sbjct: 4326 cgagctgcttgccggcaaagatcaatcgctgctggtccggaggaattccctccttatcct 4267 Query: 226 ggatcttcg 234 ||||||||| Sbjct: 4266 ggatcttcg 4258
>ref|NM_001009117.1| Pan troglodytes ubiquitin B (UBB), mRNA Length = 690 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || Sbjct: 665 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttcc 606 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | ||| Sbjct: 605 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcttgg 546 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 545 atcttggccttcacattttcgatggtgtcactgggctccacctccagagtgatggtcttg 486 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 485 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 428 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 427 gggtcgactccttctggatgttg 405 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 437 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 378 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 377 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 318 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 317 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 258 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || ||||| || | Sbjct: 257 ccagtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccagatgca 200 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 199 gggtcgactccttctggatgttg 177 Score = 111 bits (56), Expect = 2e-21 Identities = 156/192 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 ||||| || ||||| |||| |||||||||||||| ||| | ||||| ||||||| || Sbjct: 209 accagatgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 150 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | ||| | |||| Sbjct: 149 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttccttatcctgg 90 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 89 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 30 Query: 288 cccgtcagggtt 299 || || |||||| Sbjct: 29 ccggtaagggtt 18
>dbj|AB089619.1| Pan troglodytes UbB gene for polyubiquitin B, complete cds Length = 690 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || Sbjct: 665 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttcc 606 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | ||| Sbjct: 605 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcttgg 546 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 545 atcttggccttcacattttcgatggtgtcactgggctccacctccagagtgatggtcttg 486 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 485 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 428 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 427 gggtcgactccttctggatgttg 405 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 437 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 378 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 377 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 318 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 317 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 258 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || ||||| || | Sbjct: 257 ccagtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccagatgca 200 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 199 gggtcgactccttctggatgttg 177 Score = 111 bits (56), Expect = 2e-21 Identities = 156/192 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 ||||| || ||||| |||| |||||||||||||| ||| | ||||| ||||||| || Sbjct: 209 accagatgcagggtcgactccttctggatgttgtagtcagaaagagtacggccatcttcc 150 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | ||| | |||| Sbjct: 149 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttccttatcctgg 90 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 89 atcttggccttcacattttcgatggtgtcactgggctccacctcaagggtgatggtcttg 30 Query: 288 cccgtcagggtt 299 || || |||||| Sbjct: 29 ccggtaagggtt 18
>emb|Z93118.1|MAZ93118 M.acuminata mRNA; clone pBAN UU116 Length = 791 Score = 137 bits (69), Expect = 3e-29 Identities = 214/265 (80%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| |||||||||||||||| |||||| ||||||| |||| || |||||||||| || Sbjct: 379 gcacaaggtgaagggtagactccttctgaatgttgtaatctgccagggtgcggccatcct 320 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | |||||||||||||| || ||||| | ||||||||||| || | |||| ||||| || Sbjct: 319 caagctgcttgccggcaaagatgagcctttgctggtccgggggaanaccctccttgtcct 260 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 | ||||| ||||| || |||||||||||| | ||| | ||||| || |||||||||| Sbjct: 259 gaatcttggcctttacattgtcgatggtgtccgagctntccacctcaagggtgatggtct 200 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 | || |||| | ||||||| || || | ||| ||||||| |||||||| || ||||| Sbjct: 199 tcccagtcaaag-tcttgacgaagatttgcatgccaccac-ggaggcggaggacaaggtg 142 Query: 346 gagggtngactccttntggatgttg 370 |||||| |||||||| ||||||||| Sbjct: 141 gagggtggactccttctggatgttg 117 Score = 93.7 bits (47), Expect = 4e-16 Identities = 113/137 (82%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| |||||||||||||| || | | |||||||||| ||||||| Sbjct: 146 aggtggagggtggactccttctggatgttgtaatcagccaaggtgcggccatcctcgagc 87 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 ||||||||||| || ||||| | ||||||||| || || ||||||| ||| | ||| ||| Sbjct: 86 tgcttgccggcaaagatgagcctctgctggtcggggggaatgccctccttatcctgaatc 27 Query: 231 ttcgccttgacgttgtc 247 || |||||||| ||||| Sbjct: 26 ttggccttgacattgtc 10
>gb|AC120412.12| Mus musculus chromosome 5, clone RP24-447P14, complete sequence Length = 149454 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 4397 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 4456 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 4457 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 4516 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 4517 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 4576 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 4577 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 4634 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 4635 gggtggactctttctggatgttg 4657 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 4169 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 4228 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 4229 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 4288 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 4289 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 4348 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 4349 cctgtcaggg-tcttcacaaagatctgcatcccacctc-tgaggcgaaggaccaggtgca 4406 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 4407 gggtggactctttctggatgttg 4429 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 3941 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 4000 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 4001 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 4060 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 4061 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 4120 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 4121 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 4178 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 4179 gggtggactctttctggatgttg 4201 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 3713 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 3772 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 3773 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 3832 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 3833 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 3892 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 3893 cctgtcaggg-tcttcacaaagatctgcatcccacctc-tgaggcgaaggaccaggtgca 3950 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 3951 gggtggactctttctggatgttg 3973 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 3029 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 3088 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 3089 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 3148 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 3149 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 3208 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 3209 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 3266 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 3267 gggtggactctttctggatgttg 3289 Score = 127 bits (64), Expect = 3e-26 Identities = 205/254 (80%), Gaps = 2/254 (0%) Strand = Plus / Plus Query: 117 agggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttg 176 ||||| |||| ||||||||||||| ||||| || |||||||||| || ||||||||| Sbjct: 3494 agggtggactctttctggatgttgtagtctgacagggtgcggccatcttccagctgcttg 3553 Query: 177 ccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgcc 236 || || || || || | ||||||||| || |||||||||| ||||| ||||||||| ||| Sbjct: 3554 cctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctggatctttgcc 3613 Query: 237 ttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagg 296 ||||| || || |||||| || || || |||| ||| |||||||||||||| |||||| Sbjct: 3614 ttgacattctcaatggtgtcactgggctcgacctccagggtgatggtcttgcctgtcagg 3673 Query: 297 gttcttgacnaanatctncataccaccacanaaggcggagcaccaggtggagggtngact 356 | |||| || || |||| ||| ||||| | ||||| || |||||||| ||||| |||| Sbjct: 3674 g-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgcagggtggact 3731 Query: 357 ccttntggatgttg 370 | || ||||||||| Sbjct: 3732 ctttctggatgttg 3745 Score = 117 bits (59), Expect = 3e-23 Identities = 156/191 (81%) Strand = Plus / Plus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 3257 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 3316 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 3317 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 3376 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||| ||| Sbjct: 3377 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggttttg 3436 Query: 288 cccgtcagggt 298 || |||||||| Sbjct: 3437 cctgtcagggt 3447 Score = 109 bits (55), Expect = 6e-21 Identities = 146/179 (81%) Strand = Plus / Plus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 4625 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 4684 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 4685 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 4744 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 4745 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggtctt 4803 Score = 50.1 bits (25), Expect = 0.005 Identities = 78/95 (82%), Gaps = 2/95 (2%) Strand = Plus / Plus Query: 276 gtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcgga 335 |||||||||||||| ||||||| |||| || || |||| ||| ||||| | ||||| | Sbjct: 2969 gtgatggtcttgcctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaa 3026 Query: 336 gcaccaggtggagggtngactccttntggatgttg 370 | |||||||| ||||| ||||| || ||||||||| Sbjct: 3027 ggaccaggtgcagggtggactctttctggatgttg 3061
>dbj|AB099044.1| Bos taurus mRNA for similar to polyubiquitin, partial cds, clone: ORCS12767 Length = 534 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 460 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 401 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 400 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 341 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 340 atcttggccttcacgttctcgatggtgtcactgggctccacttccagggtgatggtcttg 281 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || ||||| |||||||| | Sbjct: 280 ccggtcaggg-tcttcacgaagatctgcataccacc-cctcagacggaggaccaggtgca 223 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 222 gggtcgactctttctggatgttg 200 Score = 133 bits (67), Expect = 4e-28 Identities = 177/216 (81%), Gaps = 1/216 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 232 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 173 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 172 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 113 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 112 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 53 Query: 288 cccgtcagggttcttgacnaanatctncataccacc 323 || ||||||| |||| || || |||| ||||||||| Sbjct: 52 ccggtcaggg-tcttcacgaagatctgcataccacc 18
>dbj|AB098769.1| Bos taurus mRNA for similar to polyubiquitin, partial cds, clone: ORCS11653 Length = 486 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 165 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 224 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 225 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 284 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 285 atcttggccttcacgttctcgatggtgtcactgggctccacttccagggtgatggtcttg 344 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || ||||| |||||||| | Sbjct: 345 ccggtcaggg-tcttcacgaagatctgcataccacc-cctcagacggaggaccaggtgca 402 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 403 gggtcgactctttctggatgttg 425 Score = 67.9 bits (34), Expect = 2e-08 Identities = 78/94 (82%) Strand = Plus / Plus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 393 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 452 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggt 201 |||||||||||||| || ||||| | |||||||| Sbjct: 453 agctgcttgccggcaaagatgagcctctgctggt 486
>ref|NM_019639.3| Mus musculus ubiquitin C (Ubc), mRNA Length = 2779 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 2526 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 2467 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 2466 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 2407 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 2406 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 2347 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 2346 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 2289 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 2288 gggtggactctttctggatgttg 2266 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 2070 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 2011 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 2010 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1951 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1950 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 1891 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1890 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 1833 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 1832 gggtggactctttctggatgttg 1810 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1842 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1783 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1782 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1723 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1722 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 1663 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1662 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 1605 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 1604 gggtggactctttctggatgttg 1582 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1614 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1555 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1554 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1495 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1494 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 1435 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||||| || || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1434 cctgtcagggtt-ttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 1377 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 1376 gggtggactctttctggatgttg 1354 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1158 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1099 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 1098 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 1039 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1038 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 979 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||||| || || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 978 cctgtcagggtt-ttcacaaagatctgcatcccacctc-tgaggcgaaggaccaggtgca 921 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 920 gggtggactctttctggatgttg 898 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 930 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 871 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 870 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 811 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 810 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 751 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 750 cctgtcaggg-tcttcacaaagatctgcatcccacctc-tgaggcgaaggaccaggtgca 693 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 692 gggtggactctttctggatgttg 670 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 474 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 415 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 414 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 355 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 354 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 295 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 294 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 237 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 236 gggtggactctttctggatgttg 214 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 2298 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 2239 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 2238 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 2179 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||| ||| Sbjct: 2178 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggttttg 2119 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 2118 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 2061 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 2060 gggtggactctttctggatgttg 2038 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 1386 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 1327 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || | |||||||| ||||| |||| Sbjct: 1326 agctgcttgcctgcaaagatcagcctctgctggtcaggggagatgccctccttgtcctgg 1267 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 1266 atctttgccttgacattctctatggtgtcactgggctcgacctccagggtgatggtcttg 1207 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 1206 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 1149 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 1148 gggtggactctttctggatgttg 1126 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || ||||||||| || Sbjct: 702 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccaccttcc 643 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 642 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 583 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| |||||||| || || |||||| || || || |||| ||| |||||||||||| Sbjct: 582 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggtcttg 523 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 522 cctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaaggaccaggtgca 465 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 464 gggtggactctttctggatgttg 442 Score = 109 bits (55), Expect = 6e-21 Identities = 146/179 (81%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||||| || |||||||||| || Sbjct: 246 accaggtgcagggtggactctttctggatgttgtagtctgacagggtgcggccatcttcc 187 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || || || | ||||||||| || |||||||||| ||||| |||| Sbjct: 186 agctgcttgcctgcaaagatcagcctctgctggtcaggggggatgccctccttgtcctgg 127 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtctt 286 ||||| |||||||| || || |||||| || || || |||| ||| ||||||||||| Sbjct: 126 atctttgccttgacattctcaatggtgtcactgggctcgacctccagggtgatggtctt 68 Score = 50.1 bits (25), Expect = 0.005 Identities = 78/95 (82%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 276 gtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacanaaggcgga 335 |||||||||||||| ||||||| |||| || || |||| ||| ||||| | ||||| | Sbjct: 2586 gtgatggtcttgcctgtcaggg-tcttcacaaagatctgcatgccacctc-tgaggcgaa 2529 Query: 336 gcaccaggtggagggtngactccttntggatgttg 370 | |||||||| ||||| ||||| || ||||||||| Sbjct: 2528 ggaccaggtgcagggtggactctttctggatgttg 2494
>emb|X51703.1|MMUBIQU Mouse mRNA for ubiquitin Length = 1172 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | || |||||||||| || Sbjct: 541 accaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggccatcttcc 482 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 481 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 422 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 421 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 362 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 361 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 304 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 303 gggttgactccttctggatgttg 281 Score = 131 bits (66), Expect = 2e-27 Identities = 227/283 (80%), Gaps = 2/283 (0%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 789 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 730 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || ||||| |||||||| || || || | ||||||||| || | Sbjct: 729 agagggtgcggccatcttccagctgtttgccggcaaagatcagcctctgctggtcagggg 670 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 669 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 610 Query: 268 ccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatctncataccaccacan 327 ||| ||| |||||||||||||| ||||||| |||| || || |||| ||| ||||| | Sbjct: 609 cctccagggtgatggtcttgccagtcaggg-tcttcacgaagatctgcatgccacc-cct 552 Query: 328 aaggcggagcaccaggtggagggtngactccttntggatgttg 370 || ||||| |||||||| ||||| ||||| || ||||||||| Sbjct: 551 cagacggaggaccaggtgcagggttgactctttctggatgttg 509 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 997 accaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggccatcttct 938 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 937 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 878 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| || |||||||||||| Sbjct: 877 atcttggccttcacattctcgatggtgtcactgggctccacctccaaggtgatggtcttg 818 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | ||||| || |||||||| | Sbjct: 817 ccggtcaggg-tcttcacgaagatctgcatgccacctc-tcaggcgaaggaccaggtgca 760 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 759 gggttgactccttctggatgttg 737 Score = 119 bits (60), Expect = 7e-24 Identities = 171/211 (81%) Strand = Plus / Minus Query: 88 tgccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctg 147 ||||||| | ||||| | | |||||||| ||||| |||| |||||||||||||| || | Sbjct: 333 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgtaatcag 274 Query: 148 gnagagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggag 207 || |||||||||| || |||||||||||||| || || || | ||||||||| || | Sbjct: 273 agagggtgcggccatcttccagctgcttgccggcaaagatcagcctctgctggtcagggg 214 Query: 208 ggatgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactnca 267 ||||||||| || | ||||||||| ||||| ||||| ||||||||| || || || || Sbjct: 213 ggatgccctctttatcctggatcttggccttcacgttctcgatggtgtcactgggctcca 154 Query: 268 ccttcagtgtgatggtcttgcccgtcagggt 298 ||| || |||||||||||||| |||||||| Sbjct: 153 cctctagggtgatggtcttgccggtcagggt 123
>gb|M62431.1|BVDCP1 Bovine viral diarrhea virus CP1 putative helcase/protease mRNA, partial cds Length = 5688 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 3176 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 3117 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 3116 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 3057 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 3056 atcttggccttcacgttctcgatggtgtcactgggctccacttccagggtgatggtcttg 2997 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || ||||| |||||||| | Sbjct: 2996 ccggtcaggg-tcttcacgaagatctgcataccacc-cctcagacggaggaccaggtgca 2939 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 2938 gggtcgactctttctggatgttg 2916 Score = 69.9 bits (35), Expect = 6e-09 Identities = 79/95 (83%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 2948 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 2889 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtc 202 |||||||||||||| || ||||| | ||||||||| Sbjct: 2888 agctgcttgccggcaaagatgagcctctgctggtc 2854
>gb|AC163692.4| Mus musculus BAC clone RP24-68H1 from chromosome 14, complete sequence Length = 224333 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | || |||||||||| || Sbjct: 145663 accaggtgcagggttgactctttctggatgttgtaatcagagagggtgcggccatcttcc 145722 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 145723 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 145782 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 145783 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 145842 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | || ||||| |||||||| | Sbjct: 145843 ccggtcaggg-tcttcacgaagatctgcatgccacc-cctcagacggaggaccaggtgca 145900 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 145901 gggttgactccttctggatgttg 145923 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 145435 accaggtgcagggtcgactctttctggatgttgtaatcagagagagtgcggccatcttct 145494 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 145495 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 145554 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 145555 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 145614 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||| ||||| | || ||||| |||||||| | Sbjct: 145615 ccagtcaggg-tcttcacgaagatctgcatgccacc-cctcagacggaggaccaggtgca 145672 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 145673 gggttgactctttctggatgttg 145695 Score = 117 bits (59), Expect = 3e-23 Identities = 156/191 (81%) Strand = Plus / Plus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| || | || |||||||||| || Sbjct: 145891 accaggtgcagggttgactccttctggatgttgtaatcagagagggtgcggccatcttcc 145950 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || || || | ||||||||| || |||||||||| || | |||| Sbjct: 145951 agctgcttgccggcaaagatcagcctctgctggtcaggggggatgccctctttatcctgg 146010 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| || |||||||||||| Sbjct: 146011 atcttggccttcacgttctcgatggtgtcactgggctccacctctagggtgatggtcttg 146070 Query: 288 cccgtcagggt 298 || |||||||| Sbjct: 146071 ccggtcagggt 146081
>gb|M62429.1|BOVPOUBA Bovine polyubiquitin mRNA, 3' end, clone rpub2 Length = 636 Score = 137 bits (69), Expect = 3e-29 Identities = 213/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 471 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 412 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 411 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 352 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 351 atcttggccttcacgttctcgatggtgtcactgggctccacttccagggtgatggtcttg 292 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || ||||| |||||||| | Sbjct: 291 ccggtcaggg-tcttcacgaagatctgcataccacc-cctcagacggaggaccaggtgca 234 Query: 348 gggtngactccttntggatgttg 370 |||| ||||| || ||||||||| Sbjct: 233 gggtcgactctttctggatgttg 211 Score = 133 bits (67), Expect = 4e-28 Identities = 177/216 (81%), Gaps = 1/216 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 243 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 184 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 183 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 124 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 123 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 64 Query: 288 cccgtcagggttcttgacnaanatctncataccacc 323 || ||||||| |||| || || |||| ||||||||| Sbjct: 63 ccggtcaggg-tcttcacgaagatctgcataccacc 29
>emb|CR590697.1| full-length cDNA clone CS0DE002YC17 of Placenta of Homo sapiens (human) Length = 652 Score = 135 bits (68), Expect = 1e-28 Identities = 209/258 (81%), Gaps = 2/258 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| |||||||||||||| ||| | ||||||||||||| || Sbjct: 256 accaggtgcagggtcgactccttctggatgttgtagtcagaaagagtgcggccatcttcc 197 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| ||||||||||| | || | |||| Sbjct: 196 agctgcttgcctgcaaagatgagcctctgctggtcgggagggatgccttctttatcctgg 137 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||| | ||| |||||||||||| Sbjct: 136 atcttggccttcacattttcgatggtgtcactgggctccacttccagggtgatggtcttg 77 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 76 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 19 Query: 348 gggtngactccttntgga 365 |||| |||||||| |||| Sbjct: 18 gggtcgactccttctgga 1 Score = 129 bits (65), Expect = 7e-27 Identities = 212/263 (80%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||| || Sbjct: 484 accaggtgcagggtcgactctttctggatgttgtagtcagaaagagtgcggccatcttcc 425 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 ||||||||||| || || ||||| | ||||||||| || |||||||| | || | ||| Sbjct: 424 agctgcttgcctgcaaagatgagcctctgctggtcgggggggatgccttctttatcttgg 365 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| || || ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 364 atcttggccttcacattttcgatggtgtcactgggctccacctccagagtgatggtcttg 305 Query: 288 cccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtgga 347 || ||||||| |||| || || |||| ||||||||| | || || || |||||||| | Sbjct: 304 ccggtcaggg-tcttcacgaagatctgcataccacctc-tcagacgcaggaccaggtgca 247 Query: 348 gggtngactccttntggatgttg 370 |||| |||||||| ||||||||| Sbjct: 246 gggtcgactccttctggatgttg 224
>gb|M95597.1|NEUCRP5A Neurospora crassa ribosomal protein (crp-5) gene, 5' end Length = 1616 Score = 135 bits (68), Expect = 1e-28 Identities = 111/127 (87%) Strand = Plus / Plus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||| | || |||||||||| ||| ||||||||||||||||| || Sbjct: 353 cttctggatgttgtagtcggagagggtgcggccatcctcaagctgcttgccggcgaagat 412 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 |||||||||||||| || |||||||||| ||||| |||||||||| |||||| ||||| Sbjct: 413 caggcgctgctggtcaggggggatgccctccttgtcctggatcttctgcttgacattgtc 472 Query: 248 gatggtg 254 ||||||| Sbjct: 473 gatggtg 479
>gb|M61772.1|SUSUBIQ Strongylocentrotus purpuratus ubiquitin (polyubiquitin) mRNA, 3' end Length = 742 Score = 135 bits (68), Expect = 1e-28 Identities = 198/243 (81%), Gaps = 2/243 (0%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||||| |||||||| |||| ||| || |||||||| ||||| || Sbjct: 359 cttctggatgttgtagtctgagagagtgcgaccatcctcaagttgcttgccagcgaagat 300 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 ||| |||||||| || ||||||||||| | |||| ||||||||| ||||| ||||| || Sbjct: 299 gagacgctgctgatcgggagggatgccttctttgtcctggatcttggcctttacgttctc 240 Query: 248 gatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacna 307 ||||| | || | || |||| ||||||||||||||||| || |||||| ||||| | Sbjct: 239 gatggagtcacttggctcgacctcgagtgtgatggtcttgcctgtgagggtt-ttgacga 181 Query: 308 anatctncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatg 367 | |||| ||||||||||| ||| ||||| || || ||||| || || ||||| |||||| Sbjct: 180 agatctgcataccaccac-gaagtcggagaacgagatggagagtggattccttctggatg 122 Query: 368 ttg 370 ||| Sbjct: 121 ttg 119 Score = 99.6 bits (50), Expect = 6e-18 Identities = 105/125 (84%) Strand = Plus / Minus Query: 128 cttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttgccggcgaaaat 187 |||||||||||||| ||||| |||||||| |||| ||| || |||||||| ||||| || Sbjct: 131 cttctggatgttgtagtctgagagagtgcgaccatcctcaagttgcttgccagcgaagat 72 Query: 188 gaggcgctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtc 247 || |||||||| || ||||||||||| | |||| ||||||||| ||||| ||||| || Sbjct: 71 aagacgctgctgatcgggagggatgccttctttgtcctggatcttggcctttacgttctc 12 Query: 248 gatgg 252 ||||| Sbjct: 11 gatgg 7
>gb|AC137606.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0004B23, complete sequence Length = 153136 Score = 133 bits (67), Expect = 4e-28 Identities = 115/133 (86%) Strand = Plus / Plus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| |||||||||||||||| ||||||||| |||| ||| | || ||||| || | || Sbjct: 30413 gcactaggtgaagggtagactccttctggatattgtagtcagccagggtgcgtccgtcct 30472 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 |||||||||||||||||| |||||||||||||||||||| |||||||||| ||||| || Sbjct: 30473 tgagctgcttgccggcgaagatgaggcgctgctggtccggggggatgccctccttgtcct 30532 Query: 226 ggatcttcgcctt 238 ||||||||||| Sbjct: 30533 aaatcttcgcctt 30545 Score = 81.8 bits (41), Expect = 1e-12 Identities = 124/154 (80%) Strand = Plus / Plus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||| ||||| |||| ||||| ||||||| |||| || ||||| || | ||| || Sbjct: 30877 aggtggagggtggactctttctgaatgttgtaatctgcgagggtgcgtccgtcctcaagt 30936 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| || || ||||||||||||||||| || || || |||| ||||| ||| ||| Sbjct: 30937 tgcttgcccgcaaagatgaggcgctgctggtcaggtggaataccctccttgtcctgaatc 30996 Query: 231 ttcgccttgacgttgtcgatggtgncagaggact 264 || |||||||| ||||| || ||| ||||||||| Sbjct: 30997 ttggccttgacattgtcaatcgtgtcagaggact 31030 Score = 81.8 bits (41), Expect = 1e-12 Identities = 113/139 (81%) Strand = Plus / Plus Query: 109 ccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcga 168 ||||||| | ||| |||| |||||||||||||| ||| | |||||||||| ||||| Sbjct: 30188 ccaggtgcaaggtggactccttctggatgttgtaacctgctaaggtgcggccatcctcga 30247 Query: 169 gctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgga 228 |||||||||| || || || || |||||||| ||||| || ||||||| ||||| ||| | Sbjct: 30248 gctgcttgccagcaaagatcagtcgctgctgatccgggggaatgccctccttgtcctgaa 30307 Query: 229 tcttcgccttgacgttgtc 247 |||| || || |||||||| Sbjct: 30308 tctttgctttcacgttgtc 30326
>emb|X59943.1|DMUBEX D.melanogaster gene for ubiquitin extension protein Length = 2699 Score = 133 bits (67), Expect = 4e-28 Identities = 172/210 (81%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 ||||||||||||| | |||| ||| || || |||| |||||| ||||||| ||| | Sbjct: 1888 ccaccacgcaggcggagtaccaagtgcagtgtggactccttctgaatgttgtagtcggac 1829 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 ||||||||||||| ||| ||||||||||||||||| || || |||||||| || || || Sbjct: 1828 agagtgcggccatcctccagctgcttgccggcgaagatcagacgctgctgatctggggga 1769 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||| | ||||||||| |||||||| || ||||||||| |||| | || |||| Sbjct: 1768 atgccctccttatcctggatcttagccttgacattctcgatggtgtcagaaggctccacc 1709 Query: 270 ttcagtgtgatggtcttgcccgtcagggtt 299 | || |||||||||||||| || |||||| Sbjct: 1708 tccaaggtgatggtcttgccggtgagggtt 1679
>gb|AY251798.1| Lotharella amoeboformis ubiquitin/actin fusion protein 3 gene, partial cds Length = 706 Score = 133 bits (67), Expect = 4e-28 Identities = 129/152 (84%) Strand = Plus / Minus Query: 111 aggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagc 170 ||||||||||| |||| |||||||||||||| ||| | || |||||||||| ||||||| Sbjct: 186 aggtgaagggtggactccttctggatgttgtagtcggcaagggtgcggccatcctcgagc 127 Query: 171 tgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatc 230 |||||||| ||||| |||||||||||||| || || || || |||| ||||| ||||||| Sbjct: 126 tgcttgcccgcgaagatgaggcgctgctgatcagggggaattccctccttgtcctggatc 67 Query: 231 ttcgccttgacgttgtcgatggtgncagagga 262 ||| ||||||| ||| ||||||| | ||||| Sbjct: 66 ttctgcttgacggtgttgatggtgtcggagga 35
>emb|Z14232.1|LMUBIQUTN Leishmania major ubiquitin gene Length = 937 Score = 133 bits (67), Expect = 4e-28 Identities = 115/133 (86%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| || || |||| |||||||||||||| ||| | || |||||||| | || Sbjct: 721 gcaccaggtgcagcgtggactccttctggatgttgtagtccgagagcgtgcggccctcct 662 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||||||||| || ||||||||||||||||| |||||||||| ||||| || Sbjct: 661 ccagctgcttgccggcgaagatcaggcgctgctggtccggcgggatgccctccttgtcct 602 Query: 226 ggatcttcgcctt 238 ||||||| ||||| Sbjct: 601 ggatcttggcctt 589 Score = 48.1 bits (24), Expect = 0.020 Identities = 37/42 (88%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||| ||||||||||| || || |||||||| ||||||||| Sbjct: 728 aggcgcagcaccaggtgcagcgtggactccttctggatgttg 687
>emb|X73120.1|LTUBI L.tarentolae polyubiquitin gene for ubiquitin Length = 1225 Score = 133 bits (67), Expect = 4e-28 Identities = 124/145 (85%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| || || |||| |||||||||||||| ||| | || |||||||| | || Sbjct: 1057 gcaccaggtgcagcgtggactccttctggatgttgtagtccgagagcgtgcggccctcct 998 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| ||||| || ||||||||||||||||| |||||||||| ||||| || Sbjct: 997 ccagctgcttgcccgcgaagatcaggcgctgctggtccggcgggatgccctccttgtcct 938 Query: 226 ggatcttcgccttgacgttgtcgat 250 ||||||| ||||| ||||| ||||| Sbjct: 937 ggatcttggccttcacgttctcgat 913 Score = 48.1 bits (24), Expect = 0.020 Identities = 37/42 (88%) Strand = Plus / Minus Query: 329 aggcggagcaccaggtggagggtngactccttntggatgttg 370 ||||| ||||||||||| || || |||||||| ||||||||| Sbjct: 1064 aggcgcagcaccaggtgcagcgtggactccttctggatgttg 1023
>emb|X53059.1|DMUB52AA Fruit fly mRNA for ubiquitin 52-AA extension protein Length = 563 Score = 133 bits (67), Expect = 4e-28 Identities = 172/210 (81%) Strand = Plus / Minus Query: 90 ccaccacgcaggctangcaccaggtgaagggtagactncttctggatgttgtngtctggn 149 ||||||||||||| | |||| ||| || || |||| |||||| ||||||| ||| | Sbjct: 261 ccaccacgcaggcggagtaccaagtgcagtgtggactccttctgaatgttgtagtcggac 202 Query: 150 agagtgcggccatnctcgagctgcttgccggcgaaaatgaggcgctgctggtccggaggg 209 ||||||||||||| ||| ||||||||||||||||| || || |||||||| || || || Sbjct: 201 agagtgcggccatcctccagctgcttgccggcgaagatcagacgctgctgatctggggga 142 Query: 210 atgccctncttgtnctggatcttcgccttgacgttgtcgatggtgncagaggactncacc 269 ||||||| ||| | ||||||||| |||||||| || ||||||||| |||| | || |||| Sbjct: 141 atgccctccttatcctggatcttagccttgacattctcgatggtgtcagaaggctccacc 82 Query: 270 ttcagtgtgatggtcttgcccgtcagggtt 299 | || |||||||||||||| || |||||| Sbjct: 81 tccaaggtgatggtcttgccggtgagggtt 52
>emb|X07451.1|TCUBI Trypanosoma cruzi ubiquitin gene Length = 1152 Score = 133 bits (67), Expect = 4e-28 Identities = 127/149 (85%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| || || |||| |||||||||||||| ||||| || |||||||| | || Sbjct: 464 gcacaaggtgcagcgtggactccttctggatgttgtagtctgcaagcgtgcggccgtcct 405 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| ||||| || ||||||||||||||||| || ||||||| ||||| || Sbjct: 404 ccagctgcttgccagcgaagatcaggcgctgctggtccggtggaatgccctccttgtcct 345 Query: 226 ggatcttcgccttgacgttgtcgatggtg 254 ||||||||||||| ||||| || |||||| Sbjct: 344 ggatcttcgccttcacgttctcaatggtg 316 Score = 125 bits (63), Expect = 1e-25 Identities = 126/149 (84%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||| || || |||| |||||||||||||| ||||| || |||||||| | || Sbjct: 1129 gcacaaggtgcagcgtggactccttctggatgttgtagtctgcaagcgtgcggccgtcct 1070 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||||||||| ||||| || ||||||||||||||||| || ||||| | ||||| || Sbjct: 1069 ccagctgcttgccagcgaagatcaggcgctgctggtccggtggaatgccttccttgtcct 1010 Query: 226 ggatcttcgccttgacgttgtcgatggtg 254 ||||||||||||| ||||| || |||||| Sbjct: 1009 ggatcttcgccttcacgttctcaatggtg 981
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 133 bits (67), Expect = 4e-28 Identities = 152/183 (83%) Strand = Plus / Plus Query: 117 agggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttg 176 ||||| |||| |||||| ||||||| ||| | || ||||| || | ||||||||||||| Sbjct: 5073211 agggtcgactccttctgaatgttgtagtcagcaagggtgcgtccttcctcgagctgcttg 5073270 Query: 177 ccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgcc 236 || ||||| |||||||||||||||||||| || || |||| ||| | ||||||||||||| Sbjct: 5073271 ccagcgaagatgaggcgctgctggtccgggggaataccctccttatcctggatcttcgcc 5073330 Query: 237 ttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagg 296 || || |||||||| ||| | || |||| ||||| || ||||||| |||||| |||||| Sbjct: 5073331 ttcacattgtcgattgtgtcggatgactccacctcaagggtgatggacttgccggtcagg 5073390 Query: 297 gtt 299 ||| Sbjct: 5073391 gtt 5073393 Score = 44.1 bits (22), Expect = 0.32 Identities = 30/33 (90%) Strand = Plus / Plus Query: 218 cttgtnctggatcttcgccttgacgttgtcgat 250 ||||| ||||||||||||||| |||| |||||| Sbjct: 5088213 cttgtcctggatcttcgccttcacgtcgtcgat 5088245
>gb|AY099130.1| Cercomonas edax isolate pub2 polyubiquitin gene, partial cds Length = 408 Score = 133 bits (67), Expect = 4e-28 Identities = 106/121 (87%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||| ||||||||||| |||| |||||||||||||| ||| | || |||||||| | || Sbjct: 301 gcacaaggtgaagggtcgactccttctggatgttgtagtcagccagggtgcggccgtcct 242 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 ||||||||||||||||||| |||||||||||||| ||||| |||||||||| ||||| || Sbjct: 241 cgagctgcttgccggcgaagatgaggcgctgctgatccggggggatgccctccttgtcct 182 Query: 226 g 226 | Sbjct: 181 g 181 Score = 42.1 bits (21), Expect = 1.2 Identities = 59/72 (81%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 246 tcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgac 305 ||||||||| ||||| || ||| | ||| |||||||||||||| || |||| ||||||| Sbjct: 395 tcgatggtgtcagagctctccacgtccagggtgatggtcttgccggtgaggg-tcttgac 337 Query: 306 naanatctncat 317 || |||| ||| Sbjct: 336 gaagatctgcat 325 Score = 40.1 bits (20), Expect = 4.9 Identities = 54/66 (81%) Strand = Plus / Minus Query: 224 ctggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggt 283 |||||||||| ||| ||||| ||||| ||| ||||| || ||| | ||| |||||||| Sbjct: 73 ctggatcttctgcttcacgttctcgatcgtgtcagagctctccacgtccagggtgatggt 14 Query: 284 cttgcc 289 |||||| Sbjct: 13 cttgcc 8
>dbj|AP004568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0547A06 Length = 150922 Score = 133 bits (67), Expect = 4e-28 Identities = 152/183 (83%) Strand = Plus / Plus Query: 117 agggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttg 176 ||||| |||| |||||| ||||||| ||| | || ||||| || | ||||||||||||| Sbjct: 110768 agggtcgactccttctgaatgttgtagtcagcaagggtgcgtccttcctcgagctgcttg 110827 Query: 177 ccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgcc 236 || ||||| |||||||||||||||||||| || || |||| ||| | ||||||||||||| Sbjct: 110828 ccagcgaagatgaggcgctgctggtccgggggaataccctccttatcctggatcttcgcc 110887 Query: 237 ttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagg 296 || || |||||||| ||| | || |||| ||||| || ||||||| |||||| |||||| Sbjct: 110888 ttcacattgtcgattgtgtcggatgactccacctcaagggtgatggacttgccggtcagg 110947 Query: 297 gtt 299 ||| Sbjct: 110948 gtt 110950 Score = 44.1 bits (22), Expect = 0.32 Identities = 30/33 (90%) Strand = Plus / Plus Query: 218 cttgtnctggatcttcgccttgacgttgtcgat 250 ||||| ||||||||||||||| |||| |||||| Sbjct: 125770 cttgtcctggatcttcgccttcacgtcgtcgat 125802
>emb|Z54175.1|BVDTGACB1 Bovine viral diarrhea virus TGAC-B1 RNA Length = 984 Score = 133 bits (67), Expect = 4e-28 Identities = 177/216 (81%), Gaps = 1/216 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 782 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 723 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 722 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 663 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 662 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 603 Query: 288 cccgtcagggttcttgacnaanatctncataccacc 323 || ||||||| |||| || || |||| ||||||||| Sbjct: 602 ccggtcaggg-tcttcacgaagatctgcataccacc 568
>emb|Z54176.1|BVDCPA2 Bovine viral diarrhea virus cpA2 RNA Length = 984 Score = 133 bits (67), Expect = 4e-28 Identities = 177/216 (81%), Gaps = 1/216 (0%) Strand = Plus / Minus Query: 108 accaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnctcg 167 |||||||| ||||| |||| ||||||||||||| || | ||||||||||||| || Sbjct: 782 accaggtgcagggtcgactctttctggatgttgtaatcagaaagagtgcggccatcttcc 723 Query: 168 agctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctgg 227 |||||||||||||| || ||||| | ||||||||| || || ||||| | ||| | |||| Sbjct: 722 agctgcttgccggcaaagatgagcctctgctggtcagggggaatgccttccttatcctgg 663 Query: 228 atcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttg 287 ||||| ||||| ||||| ||||||||| || || || ||||| ||| |||||||||||| Sbjct: 662 atcttggccttcacgttctcgatggtgtcactgggctccacctccagggtgatggtcttg 603 Query: 288 cccgtcagggttcttgacnaanatctncataccacc 323 || ||||||| |||| || || |||| ||||||||| Sbjct: 602 ccggtcaggg-tcttcacgaagatctgcataccacc 568
>dbj|AB089615.1| Gorilla gorilla UbC gene for polyubiquitin C, complete cds Length = 1830 Score = 133 bits (67), Expect = 4e-28 Identities = 214/265 (80%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| |||||||||| ||||||||||||| ||| | || ||||| |||| | Sbjct: 1579 gcaccaggtgcagggtagactctttctggatgttgtagtcagacagggtgcgtccatctt 1520 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | |||||||| ||||| || || | | ||||||||| ||||||||||| | ||||| | Sbjct: 1519 ccagctgctttccggcaaagatcaacctctgctggtcaggagggatgccttccttgtctt 1460 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| ||||||||||| ||||||||| || || || ||||| || |||||||||| Sbjct: 1459 ggatctttgccttgacgttctcgatggtgtcactgggctccacctcgagggtgatggtct 1400 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 | || ||||||| |||| || || |||| ||| ||||| | || |||||||||||||| Sbjct: 1399 taccagtcaggg-tcttcacgaagatctgcatcccacctc-tgagacggagcaccaggtg 1342 Query: 346 gagggtngactccttntggatgttg 370 ||||| ||||| || ||||||||| Sbjct: 1341 cagggtggactctttctggatgttg 1317 Score = 117 bits (59), Expect = 3e-23 Identities = 212/265 (80%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| ||||||||||||| ||| | || ||||| |||| || Sbjct: 1351 gcaccaggtgcagggtggactctttctggatgttgtagtcagacagggtgcgcccatcct 1292 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | |||||||| ||||| || || | | ||||||||| ||||||||||| | ||||| | Sbjct: 1291 ccagctgctttccggcaaagatcaacctctgctggtcaggagggatgccttccttgtctt 1232 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| |||||||| || ||||||||| || || || |||| || |||||||||| Sbjct: 1231 ggatctttgccttgacattctcgatggtgtcactgggctcgacctcaagggtgatggtct 1172 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 | || ||||||| |||| || || |||| ||| ||||| | || |||||||||||||| Sbjct: 1171 taccagtcaggg-tcttcacgaagatctgcatcccacctc-tgagacggagcaccaggtg 1114 Query: 346 gagggtngactccttntggatgttg 370 ||||| ||||| || ||||||||| Sbjct: 1113 cagggtggactctttctggatgttg 1089 Score = 117 bits (59), Expect = 3e-23 Identities = 212/265 (80%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| ||||||||||||| ||| | || ||||| |||| || Sbjct: 667 gcaccaggtgcagggtggactctttctggatgttgtagtcagacagggtgcgcccatcct 608 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | |||||||| ||||| || || | | ||||||||| ||||||||||| | ||||| | Sbjct: 607 ccagctgctttccggcaaagatcaacctctgctggtcaggagggatgccttccttgtctt 548 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| || |||||||| ||||||||| || || || |||| || |||||||||| Sbjct: 547 ggatctttgctttgacgttctcgatggtgtcactgggctcgacctcgagggtgatggtct 488 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 | || ||||||| |||| || || |||| ||| ||||| | || |||||||||||||| Sbjct: 487 taccagtcaggg-tcttcacgaagatctgcatcccacctc-tgagacggagcaccaggtg 430 Query: 346 gagggtngactccttntggatgttg 370 ||||| ||||| || ||||||||| Sbjct: 429 cagggtggactctttctggatgttg 405 Score = 117 bits (59), Expect = 3e-23 Identities = 212/265 (80%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| ||||||||||||| ||| | || ||||| |||| || Sbjct: 439 gcaccaggtgcagggtggactctttctggatgttgtagtcagacagggtgcgcccatcct 380 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | |||||||| ||||| || || | | ||||||||| ||||||||||| | ||||| | Sbjct: 379 ccagctgctttccggcaaagatcaacctctgctggtcaggagggatgccttccttgtctt 320 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| || |||||||| ||||||||| || || || |||| || |||||||||| Sbjct: 319 ggatctttgctttgacgttctcgatggtgtcactgggctcgacctcgagggtgatggtct 260 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 | || ||||||| |||| || || |||| ||| ||||| | || |||||||||||||| Sbjct: 259 taccagtcaggg-tcttcacgaagatctgcatcccacctc-tgagacggagcaccaggtg 202 Query: 346 gagggtngactccttntggatgttg 370 ||||| ||||| || ||||||||| Sbjct: 201 cagggtagactctttctggatgttg 177 Score = 101 bits (51), Expect = 2e-18 Identities = 145/177 (81%), Gaps = 2/177 (1%) Strand = Plus / Minus Query: 194 ctgctggtccggagggatgccctncttgtnctggatcttcgccttgacgttgtcgatggt 253 ||||||||| ||||||||||| | ||||| |||||||| |||||||| || |||||||| Sbjct: 1719 ctgctggtcaggagggatgccttccttgtcttggatctttgccttgacattctcgatggt 1660 Query: 254 gncagaggactncaccttcagtgtgatggtcttgcccgtcagggttcttgacnaanatct 313 | || || || ||||| || |||||||||||||| ||||||| |||| || || |||| Sbjct: 1659 gtcactgggctccacctcgagggtgatggtcttgccagtcaggg-tcttcacgaagatct 1601 Query: 314 ncataccaccacanaaggcggagcaccaggtggagggtngactccttntggatgttg 370 ||| ||||| | || |||||||||||||| ||||| ||||| || ||||||||| Sbjct: 1600 gcatcccacctc-tgagacggagcaccaggtgcagggtagactctttctggatgttg 1545 Score = 101 bits (51), Expect = 2e-18 Identities = 210/265 (79%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| ||||||||||||| ||| | || ||||| |||| | Sbjct: 1123 gcaccaggtgcagggtggactctttctggatgttgtagtcagacagggtgcgcccatctt 1064 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | |||||||| || || || || | | ||||||||| ||||||||||| | ||||| | Sbjct: 1063 ccagctgctttccagcaaagatcaacctctgctggtcaggagggatgccttccttgtctt 1004 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| || |||||||| ||||||||| || || || |||| || |||||||||| Sbjct: 1003 ggatctttgctttgacgttctcgatggtgtcactgggctcgacctcgagggtgatggtct 944 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 | || ||||||| |||| || || |||| ||| ||||| | || |||||||||||||| Sbjct: 943 taccagtcaggg-tcttcacgaagatctgcatcccacctc-tgagacggagcaccaggtg 886 Query: 346 gagggtngactccttntggatgttg 370 ||||| ||||| || ||||||||| Sbjct: 885 cagggtggactctttctggatgttg 861 Score = 101 bits (51), Expect = 2e-18 Identities = 210/265 (79%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| ||||| |||| ||||||||||||| ||| | || ||||| |||| | Sbjct: 895 gcaccaggtgcagggtggactctttctggatgttgtagtcagacagggtgcgcccatctt 836 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | |||||||| || || || || | | ||||||||| ||||||||||| | ||||| | Sbjct: 835 ccagctgctttccagcaaagatcaacctctgctggtcaggagggatgccttccttgtctt 776 Query: 226 ggatcttcgccttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtct 285 ||||||| || |||||||| ||||||||| || || || |||| || |||||||||| Sbjct: 775 ggatctttgctttgacgttctcgatggtgtcactgggctcgacctcgagggtgatggtct 716 Query: 286 tgcccgtcagggttcttgacnaanatctncataccaccacanaaggcggagcaccaggtg 345 | || ||||||| |||| || || |||| ||| ||||| | || |||||||||||||| Sbjct: 715 taccagtcaggg-tcttcacgaagatctgcatcccacctc-tgagacggagcaccaggtg 658 Query: 346 gagggtngactccttntggatgttg 370 ||||| ||||| || ||||||||| Sbjct: 657 cagggtggactctttctggatgttg 633 Score = 69.9 bits (35), Expect = 6e-09 Identities = 119/149 (79%) Strand = Plus / Minus Query: 106 gcaccaggtgaagggtagactncttctggatgttgtngtctggnagagtgcggccatnct 165 |||||||||| |||||||||| ||||||||||||| || | || ||||| |||| | Sbjct: 211 gcaccaggtgcagggtagactctttctggatgttgtaatcagacagggtgcgcccatctt 152 Query: 166 cgagctgcttgccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnct 225 | ||||| || || || || || || | ||||||||| ||||||||||| | ||| | | Sbjct: 151 ccagctgttttccagcaaagatcagcctctgctggtcaggagggatgccttccttatctt 92 Query: 226 ggatcttcgccttgacgttgtcgatggtg 254 ||||||| |||||||| || ||||||||| Sbjct: 91 ggatctttgccttgacattctcgatggtg 63
>dbj|AP004656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0020B10 Length = 136175 Score = 133 bits (67), Expect = 4e-28 Identities = 152/183 (83%) Strand = Plus / Plus Query: 117 agggtagactncttctggatgttgtngtctggnagagtgcggccatnctcgagctgcttg 176 ||||| |||| |||||| ||||||| ||| | || ||||| || | ||||||||||||| Sbjct: 22975 agggtcgactccttctgaatgttgtagtcagcaagggtgcgtccttcctcgagctgcttg 23034 Query: 177 ccggcgaaaatgaggcgctgctggtccggagggatgccctncttgtnctggatcttcgcc 236 || ||||| |||||||||||||||||||| || || |||| ||| | ||||||||||||| Sbjct: 23035 ccagcgaagatgaggcgctgctggtccgggggaataccctccttatcctggatcttcgcc 23094 Query: 237 ttgacgttgtcgatggtgncagaggactncaccttcagtgtgatggtcttgcccgtcagg 296 || || |||||||| ||| | || |||| ||||| || ||||||| |||||| |||||| Sbjct: 23095 ttcacattgtcgattgtgtcggatgactccacctcaagggtgatggacttgccggtcagg 23154 Query: 297 gtt 299 ||| Sbjct: 23155 gtt 23157 Score = 44.1 bits (22), Expect = 0.32 Identities = 30/33 (90%) Strand = Plus / Plus Query: 218 cttgtnctggatcttcgccttgacgttgtcgat 250 ||||| ||||||||||||||| |||| |||||| Sbjct: 37977 cttgtcctggatcttcgccttcacgtcgtcgat 38009 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,178,785 Number of Sequences: 3902068 Number of extensions: 1178785 Number of successful extensions: 23369 Number of sequences better than 10.0: 2012 Number of HSP's better than 10.0 without gapping: 1971 Number of HSP's successfully gapped in prelim test: 45 Number of HSP's that attempted gapping in prelim test: 15805 Number of HSP's gapped (non-prelim): 6630 length of query: 370 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 348 effective length of database: 17,147,199,772 effective search space: 5967225520656 effective search space used: 5967225520656 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
