>PHO85_KLULA (Q92241) Negative regulator of the PHO system (EC 2.7.11.22)|
           (Serine/threonine-protein kinase PHO85)
          Length = 304

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +3

Query: 54  TTCHARWNQPTALIIYTHILGKHKPRESRNSCQRNSEHSDDD 179
           T     W Q T L  Y  +L  H PR+ +   Q N+E   DD
Sbjct: 227 TPVEQTWPQVTQLAKYNPLLPPHMPRDLKQLLQNNTEEVLDD 268

>PACC_MAGGR (Q52B93) pH-response transcription factor pacC/RIM101|
          Length = 559

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 9/47 (19%)
 Frame = +3

Query: 48  TDTTCHARWNQ-----PTALIIYTHILGKHKPRESRN----SCQRNS 161
           +D +   RWNQ     P+A  +Y HI  +H  R+S N    +C  NS
Sbjct: 48  SDDSLICRWNQCSERFPSAEALYDHICERHVGRKSTNNLNLTCHWNS 94

>ZBT39_HUMAN (O15060) Zinc finger and BTB domain-containing protein 39|
          Length = 712

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +3

Query: 141 NSCQRNSEHSDDDVIHFGQVESLRL 215
           NSC  NSEHS D    FGQ++ L+L
Sbjct: 274 NSCLSNSEHSKDP--GFGQMDELQL 296


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,712,260
Number of Sequences: 219361
Number of extensions: 740244
Number of successful extensions: 1699
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1699
length of database: 80,573,946
effective HSP length: 78
effective length of database: 63,463,788
effective search space used: 1523130912
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)