ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd25p16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_450905.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
2ref|XM_506666.1| PREDICTED Oryza sativa (japonica cultivar-group... 52 0.001
3dbj|AK099102.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
4dbj|AK061821.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
5emb|AL392106.4| Human DNA sequence from clone RP11-563H8 on chro... 50 0.004
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.066
7dbj|AP006453.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.066
8dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.066
9gb|AC116646.5| Homo sapiens BAC clone RP11-714J18 from 4, comple... 44 0.26
10gb|AC099818.2| Homo sapiens chromosome 8, clone RP11-99I9, compl... 44 0.26
11gb|AC013799.6| Homo sapiens, clone RP11-20J1, complete sequence 44 0.26
12gb|AC091989.3| Homo sapiens chromosome 5 clone RP11-76H13, compl... 44 0.26
13gb|AC172624.2| Rhesus Macaque BAC CH250-494G19 (Children's Hosp... 44 0.26
14ref|XM_641747.1| Dictyostelium discoideum hypothetical protein (... 42 1.0
15gb|AC101672.11| Mus musculus chromosome 5, clone RP23-115F16, co... 42 1.0
16ref|NM_001032975.1| Monodelphis domestica lactate dehydrogenase ... 42 1.0
17gb|AC146156.2| Pan troglodytes BAC clone RP43-1P23 from 7, compl... 42 1.0
18gb|AC145865.2| Pan troglodytes BAC clone RP43-20N5 from 7, compl... 42 1.0
19gb|AC147031.2| Pan troglodytes BAC clone RP43-98M7 from 7, compl... 42 1.0
20gb|AC114826.6| Mus musculus BAC clone RP24-156O12 from chromosom... 42 1.0
21gb|AC003984.2| Homo sapiens PAC clone RP4-566F10 from 7, complet... 42 1.0
22gb|AC163108.5| Mus musculus BAC clone RP23-46L17 from chromosome... 42 1.0
23emb|AL031074.1|HS143G3 Human DNA sequence from clone RP1-143G3 o... 42 1.0
24gb|AC006975.2|AC006975 Homo sapiens PAC clone RP5-1026B21 from X... 42 1.0
25gb|AF070996.1|AF070996 Monodelphis domestica lactate dehydrogena... 42 1.0
26gb|BT018788.1| Zea mays clone EL01N0527G04.d mRNA sequence 40 4.0
27gb|AC138738.5| Mus musculus chromosome 3, clone RP24-293C5, comp... 40 4.0
28gb|AC149095.2| Pan troglodytes BAC clone CH251-141L12 from Y, co... 40 4.0
29gb|AC145967.3| Pan troglodytes BAC clone RP43-17M21 from 7, comp... 40 4.0
30gb|AC147100.2| Pan troglodytes BAC clone RP43-45I10 from 7, comp... 40 4.0
31gb|AC183290.2| Pan troglodytes BAC clone CH251-733G21 from chrom... 40 4.0
32gb|AC092465.5| Homo sapiens BAC clone RP11-473L7 from 7, complet... 40 4.0
33gb|AC146209.2| Pan troglodytes BAC clone CH251-375D6 from Y, com... 40 4.0
34gb|AC146375.3| Pan troglodytes BAC clone RP43-75I2 from 7, compl... 40 4.0
35emb|CR753839.12| Zebrafish DNA sequence from clone CH211-12K18 i... 40 4.0
36gb|AC132464.3| Mus musculus BAC clone RP23-53K19 from chromosome... 40 4.0
37gb|AC116587.4| Mus musculus BAC clone RP23-409C18 from 12, compl... 40 4.0
38gb|AC098745.4| Mus musculus BAC clone RP23-122P16 from 18, compl... 40 4.0
39gb|AC113969.7| Mus musculus chromosome 8, clone RP23-122L19, com... 40 4.0
40gb|AC002385.1| Homo sapiens BAC clone CTA-222A16 from 7, complet... 40 4.0
41emb|AL592104.6| Human DNA sequence from clone RP11-428K13 on chr... 40 4.0
42emb|AL445196.7| Human DNA sequence from clone RP11-31K13 on chro... 40 4.0
43emb|AL445677.1| Human DNA sequence from clone RP11-59D5 on chrom... 40 4.0
44emb|AL359955.25| Human DNA sequence from clone RP11-460N11 on ch... 40 4.0
45gb|AE014829.1| Plasmodium falciparum 3D7 chromosome 10 section 1... 40 4.0
46emb|AL356473.11| Human DNA sequence from clone RP11-560O20 on ch... 40 4.0
47emb|AL354692.23| Human DNA sequence from clone RP11-361M4 on chr... 40 4.0
48emb|AL354657.12| Human DNA sequence from clone GS1-80M18 on chro... 40 4.0
49emb|AL353667.10| Human DNA sequence from clone RP11-125B21 on ch... 40 4.0
50emb|AL158210.12| Human DNA sequence from clone RP11-554I8 on chr... 40 4.0
51emb|AL139400.9| Human DNA sequence from clone RP13-36G14 on chro... 40 4.0
52emb|AL139000.9| Human DNA sequence from clone RP11-173M10 on chr... 40 4.0
53gb|AC107204.4| Homo sapiens 3p BAC RP11-655A17 (Roswell Park Can... 40 4.0
54emb|Y18276.1|MMU18276 Mus musculus mRNA for neurobeachin 40 4.0
55gb|AC106606.5| Rattus norvegicus 1 BAC CH230-148J18 (Children's ... 40 4.0
56emb|AL031745.8|PFMAL1P2 Plasmodium falciparum DNA from MAL1P2 40 4.0
57gb|AC108709.3| Homo sapiens 3 BAC RP11-81P15 (Roswell Park Cance... 40 4.0
58gb|AC116158.5| Homo sapiens chromosome , clone RP11-102L12, comp... 40 4.0
59emb|CR392335.5| Zebrafish DNA sequence from clone CH211-161C21 i... 40 4.0
60gb|AC097105.10| Homo sapiens 3 BAC RP11-119P22 (Roswell Park Can... 40 4.0
61dbj|BS000663.2| Pan troglodytes chromosome Y clone: PTB-620F03, ... 40 4.0
62dbj|BS000601.1| Pan troglodytes chromosome Y clone:PTB-291L09, c... 40 4.0
63gb|AC025265.21| Homo sapiens 12 BAC RP11-341G23 (Roswell Park Ca... 40 4.0
64gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 4.0
65dbj|AK125132.1| Homo sapiens cDNA FLJ43142 fis, clone CTONG3007870 40 4.0
66gb|AC108745.7| Homo sapiens 3 BAC RP11-232M24 (Roswell Park Canc... 40 4.0
67gb|AC012598.16| Homo sapiens 3 BAC RP11-237K10 (Roswell Park Can... 40 4.0
68gb|AC109631.4| Homo sapiens chromosome , clone RP11-9J12, comple... 40 4.0
69gb|AC068299.21| Homo sapiens 3 BAC RP11-560F18 (Roswell Park Can... 40 4.0
70gb|AC107055.3| Homo sapiens BAC clone RP11-436G13 from 4, comple... 40 4.0
71gb|AC093874.3| Homo sapiens BAC clone RP11-624O16 from 4, comple... 40 4.0
72gb|AC093555.2| Homo sapiens chromosome 3 clone RP11-30A19, compl... 40 4.0
73gb|AC025538.6| Homo sapiens BAC clone RP11-274J2 from 4, complet... 40 4.0
74gb|AC090497.2|AC090497 Homo sapiens chromosome 7 clone RP11-643E... 40 4.0
75gb|AC096716.3| Homo sapiens BAC clone RP11-8L2 from 4, complete ... 40 4.0
76gb|AC093773.3| Homo sapiens BAC clone RP11-127A9 from 4, complet... 40 4.0
77gb|AC009481.4|AC009481 Homo sapiens BAC clone RP11-303D3 from 1,... 40 4.0
78gb|AC083870.2|AC083870 Homo sapiens chromosome 7 clone RP11-248K... 40 4.0
79gb|AC139365.3| Homo sapiens chromosome 8, clone RP11-643N23, com... 40 4.0
80gb|AC137719.5| Homo sapiens chromosome 8, clone RP11-260I22, com... 40 4.0
81gb|AC121253.3| Homo sapiens chromosome 3 clone RP11-208G16, comp... 40 4.0
82gb|AC112187.2| Homo sapiens chromosome 5 clone RP11-269M20, comp... 40 4.0
83gb|AC138624.4| Mus musculus BAC clone RP23-187N1 from chromosome... 40 4.0
84dbj|BS000085.1| Pan troglodytes chromosome 22 clone:RP43-164H01,... 40 4.0
85gb|AC155269.2| Mus musculus BAC clone RP23-215E17 from 12, compl... 40 4.0
86emb|AL445643.12| Human DNA sequence from clone RP11-350D23 on ch... 40 4.0
87gb|AY105671.1| Zea mays PCO084217 mRNA sequence 40 4.0
88gb|AC006442.1|AC006442 Homo sapiens, clone hRPK.7_A_1, complete ... 40 4.0
89dbj|AP001669.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 4.0
90ref|NG_000002.1| Homo sapiens immunoglobulin lambda locus (IGL@)... 40 4.0
91dbj|AP000457.3| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 4.0
92dbj|D87004.2| Homo sapiens immunoglobulin lambda gene locus DNA,... 40 4.0 
>ref|XM_450905.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1296

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 268  tagcctaatggctaccaacaagagaaagcaggaa 301
            ||||||||||||||||||| |||||||| |||||
Sbjct: 1057 tagcctaatggctaccaactagagaaaggaggaa 1024
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>ref|XM_506666.1| PREDICTED Oryza sativa (japonica cultivar-group), B1339H09.19 mRNA
          Length = 1298

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 268  tagcctaatggctaccaacaagagaaagcaggaa 301
            ||||||||||||||||||| |||||||| |||||
Sbjct: 1059 tagcctaatggctaccaactagagaaaggaggaa 1026
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>dbj|AK099102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023033F23, full
            insert sequence
          Length = 1296

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 268  tagcctaatggctaccaacaagagaaagcaggaa 301
            ||||||||||||||||||| |||||||| |||||
Sbjct: 1057 tagcctaatggctaccaactagagaaaggaggaa 1024
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>dbj|AK061821.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-B11, full
            insert sequence
          Length = 1298

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 268  tagcctaatggctaccaacaagagaaagcaggaa 301
            ||||||||||||||||||| |||||||| |||||
Sbjct: 1059 tagcctaatggctaccaactagagaaaggaggaa 1026
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>emb|AL392106.4| Human DNA sequence from clone RP11-563H8 on chromosome 9 Contains a novel
              gene (FLJ20808) and a ribosomal protein L23a (RPL23A)
              pseudogene, complete sequence
          Length = 150771

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                       
Query: 91     taataatatatacacatattttagg 115
              |||||||||||||||||||||||||
Sbjct: 143835 taataatatatacacatattttagg 143811
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 46.1 bits (23), Expect = 0.066
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 271      cctaatggctaccaacaagagaaagcaggaa 301
                |||||||||||||||| |||||||| |||||
Sbjct: 13656508 cctaatggctaccaactagagaaaggaggaa 13656478
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>dbj|AP006453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1339H09
          Length = 131136

 Score = 46.1 bits (23), Expect = 0.066
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 271   cctaatggctaccaacaagagaaagcaggaa 301
             |||||||||||||||| |||||||| |||||
Sbjct: 93924 cctaatggctaccaactagagaaaggaggaa 93894
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>dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1040D06
          Length = 155034

 Score = 46.1 bits (23), Expect = 0.066
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 271   cctaatggctaccaacaagagaaagcaggaa 301
             |||||||||||||||| |||||||| |||||
Sbjct: 54622 cctaatggctaccaactagagaaaggaggaa 54592
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>gb|AC116646.5| Homo sapiens BAC clone RP11-714J18 from 4, complete sequence
          Length = 49367

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 280   taccaacaagagaaagcaggaa 301
             ||||||||||||||||||||||
Sbjct: 19174 taccaacaagagaaagcaggaa 19153
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>gb|AC099818.2| Homo sapiens chromosome 8, clone RP11-99I9, complete sequence
          Length = 160046

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 280   taccaacaagagaaagcaggaa 301
             ||||||||||||||||||||||
Sbjct: 59010 taccaacaagagaaagcaggaa 59031
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>gb|AC013799.6| Homo sapiens, clone RP11-20J1, complete sequence
          Length = 186076

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 280   taccaacaagagaaagcaggaa 301
             ||||||||||||||||||||||
Sbjct: 32038 taccaacaagagaaagcaggaa 32059
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>gb|AC091989.3| Homo sapiens chromosome 5 clone RP11-76H13, complete sequence
          Length = 168575

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 282   ccaacaagagaaagcaggaacg 303
             ||||||||||||||||||||||
Sbjct: 30985 ccaacaagagaaagcaggaacg 30964
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>gb|AC172624.2| Rhesus Macaque  BAC CH250-494G19 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 155349

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 280    taccaacaagagaaagcaggaa 301
              ||||||||||||||||||||||
Sbjct: 143218 taccaacaagagaaagcaggaa 143197
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>ref|XM_641747.1| Dictyostelium discoideum hypothetical protein (DDB0216610), partial
           mRNA
          Length = 675

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 23  caaatacaatcatcaaaccaa 43
           |||||||||||||||||||||
Sbjct: 208 caaatacaatcatcaaaccaa 228
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>gb|AC101672.11| Mus musculus chromosome 5, clone RP23-115F16, complete sequence
          Length = 204025

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 128   aagagaaagcagaaatagttg 148
             |||||||||||||||||||||
Sbjct: 77911 aagagaaagcagaaatagttg 77931
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>ref|NM_001032975.1| Monodelphis domestica lactate dehydrogenase A (LDHA), mRNA
          Length = 1698

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 125  accaagagaaagcagaaatag 145
            |||||||||||||||||||||
Sbjct: 1159 accaagagaaagcagaaatag 1179
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>gb|AC146156.2| Pan troglodytes BAC clone RP43-1P23 from 7, complete sequence
          Length = 172642

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 93     ataatatatacacatatttta 113
              |||||||||||||||||||||
Sbjct: 109471 ataatatatacacatatttta 109491
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>gb|AC145865.2| Pan troglodytes BAC clone RP43-20N5 from 7, complete sequence
          Length = 175581

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 93    ataatatatacacatatttta 113
             |||||||||||||||||||||
Sbjct: 28481 ataatatatacacatatttta 28461
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>gb|AC147031.2| Pan troglodytes BAC clone RP43-98M7 from 7, complete sequence
          Length = 175794

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 93    ataatatatacacatatttta 113
             |||||||||||||||||||||
Sbjct: 27655 ataatatatacacatatttta 27675
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>gb|AC114826.6| Mus musculus BAC clone RP24-156O12 from chromosome 5, complete sequence
          Length = 179886

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 128    aagagaaagcagaaatagttg 148
              |||||||||||||||||||||
Sbjct: 156217 aagagaaagcagaaatagttg 156237
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>gb|AC003984.2| Homo sapiens PAC clone RP4-566F10 from 7, complete sequence
          Length = 69787

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 93    ataatatatacacatatttta 113
             |||||||||||||||||||||
Sbjct: 57320 ataatatatacacatatttta 57300
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>gb|AC163108.5| Mus musculus BAC clone RP23-46L17 from chromosome 6, complete sequence
          Length = 234330

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 91     taataatatatacacatattt 111
              |||||||||||||||||||||
Sbjct: 113086 taataatatatacacatattt 113066
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>emb|AL031074.1|HS143G3 Human DNA sequence from clone RP1-143G3 on chromosome Xq24-25, complete
             sequence
          Length = 99204

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 16    gtaaagccaaatacaatcatcaaac 40
             ||||||||||||||||| |||||||
Sbjct: 83577 gtaaagccaaatacaataatcaaac 83601
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>gb|AC006975.2|AC006975 Homo sapiens PAC clone RP5-1026B21 from X, complete sequence
          Length = 146410

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 16  gtaaagccaaatacaatcatcaaac 40
           ||||||||||||||||| |||||||
Sbjct: 130 gtaaagccaaatacaataatcaaac 154
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>gb|AF070996.1|AF070996 Monodelphis domestica lactate dehydrogenase A (ldha) mRNA, complete
            cds
          Length = 1698

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 125  accaagagaaagcagaaatag 145
            |||||||||||||||||||||
Sbjct: 1159 accaagagaaagcagaaatag 1179
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>gb|BT018788.1| Zea mays clone EL01N0527G04.d mRNA sequence
          Length = 1293

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 40/46 (86%), Gaps = 3/46 (6%)
 Strand = Plus / Minus

                                                         
Query: 265 acatagcctaatggcta---ccaacaagagaaagcaggaacgtccg 307
           ||||||||||||||| |   |||||||| ||||| |||||||||||
Sbjct: 955 acatagcctaatggccatgaccaacaagtgaaagaaggaacgtccg 910
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>gb|AC138738.5| Mus musculus chromosome 3, clone RP24-293C5, complete sequence
          Length = 149426

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   tcatacattttggccaggta 200
             ||||||||||||||||||||
Sbjct: 36425 tcatacattttggccaggta 36444
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>gb|AC149095.2| Pan troglodytes BAC clone CH251-141L12 from Y, complete sequence
          Length = 170577

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   ccaacaagagaaagcaggaa 301
             ||||||||||||||||||||
Sbjct: 35216 ccaacaagagaaagcaggaa 35197
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>gb|AC145967.3| Pan troglodytes BAC clone RP43-17M21 from 7, complete sequence
          Length = 179148

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    ccaacaagagaaagcaggaa 301
              ||||||||||||||||||||
Sbjct: 109432 ccaacaagagaaagcaggaa 109451
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>gb|AC147100.2| Pan troglodytes BAC clone RP43-45I10 from 7, complete sequence
          Length = 150235

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   ccaacaagagaaagcaggaa 301
             ||||||||||||||||||||
Sbjct: 67767 ccaacaagagaaagcaggaa 67748
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>gb|AC183290.2| Pan troglodytes BAC clone CH251-733G21 from chromosome 11, complete
              sequence
          Length = 166718

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 282    ccaacaagagaaagcaggaa 301
              ||||||||||||||||||||
Sbjct: 131626 ccaacaagagaaagcaggaa 131607
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>gb|AC092465.5| Homo sapiens BAC clone RP11-473L7 from 7, complete sequence
          Length = 188158

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   ccaacaagagaaagcaggaa 301
             ||||||||||||||||||||
Sbjct: 38858 ccaacaagagaaagcaggaa 38877
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>gb|AC146209.2| Pan troglodytes BAC clone CH251-375D6 from Y, complete sequence
          Length = 172765

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   ccaacaagagaaagcaggaa 301
             ||||||||||||||||||||
Sbjct: 16995 ccaacaagagaaagcaggaa 17014
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>gb|AC146375.3| Pan troglodytes BAC clone RP43-75I2 from 7, complete sequence
          Length = 205242

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 282    ccaacaagagaaagcaggaa 301
              ||||||||||||||||||||
Sbjct: 115381 ccaacaagagaaagcaggaa 115362
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>emb|CR753839.12| Zebrafish DNA sequence from clone CH211-12K18 in linkage group 14,
              complete sequence
          Length = 169064

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 93     ataatatatacacatatttt 112
              ||||||||||||||||||||
Sbjct: 115335 ataatatatacacatatttt 115316
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>gb|AC132464.3| Mus musculus BAC clone RP23-53K19 from chromosome 18, complete sequence
          Length = 175801

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     aatatatacacatattttag 114
              ||||||||||||||||||||
Sbjct: 165538 aatatatacacatattttag 165519
to top
>gb|AC116587.4| Mus musculus BAC clone RP23-409C18 from 12, complete sequence
          Length = 202651

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     taatatatacacatatttta 113
              ||||||||||||||||||||
Sbjct: 140145 taatatatacacatatttta 140126
to top
>gb|AC098745.4| Mus musculus BAC clone RP23-122P16 from 18, complete sequence
          Length = 213331

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    aatatatacacatattttag 114
             ||||||||||||||||||||
Sbjct: 64033 aatatatacacatattttag 64014
to top
>gb|AC113969.7| Mus musculus chromosome 8, clone RP23-122L19, complete sequence
          Length = 182258

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     ctaataatatatacacatat 109
              ||||||||||||||||||||
Sbjct: 113197 ctaataatatatacacatat 113178
to top
>gb|AC002385.1| Homo sapiens BAC clone CTA-222A16 from 7, complete sequence
          Length = 201990

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   ccaacaagagaaagcaggaa 301
             ||||||||||||||||||||
Sbjct: 63203 ccaacaagagaaagcaggaa 63184
to top
>emb|AL592104.6| Human DNA sequence from clone RP11-428K13 on chromosome 1 Contains a
             pseudogene similar to part of caspase 3 apoptosis-related
             cysteine protease (CASP3), complete sequence
          Length = 131489

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   ccaacaagagaaagcaggaa 301
             ||||||||||||||||||||
Sbjct: 54040 ccaacaagagaaagcaggaa 54021
to top
>emb|AL445196.7| Human DNA sequence from clone RP11-31K13 on chromosome 6 Contains a
             heterogeneous nuclear ribonucleoprotein A1 (HNRPA1)
             pseudogene, the 5' end of the VMP gene for vesicular
             membrane protein p24 and one CpG island, complete sequence
          Length = 129171

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   ccaacaagagaaagcaggaa 301
             ||||||||||||||||||||
Sbjct: 84495 ccaacaagagaaagcaggaa 84514
to top
>emb|AL445677.1| Human DNA sequence from clone RP11-59D5 on chromosome 6 Contains two
             novel genes, a pseudogene similar to part of
             platelet-activating factor acetylhydrolase variant I alpha
             subunit (PAFAH1B1) and the gene for a novel EGF-like
             domain containing protein, complete sequence
          Length = 84732

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   ccaacaagagaaagcaggaa 301
             ||||||||||||||||||||
Sbjct: 41320 ccaacaagagaaagcaggaa 41301
to top
>emb|AL359955.25| Human DNA sequence from clone RP11-460N11 on chromosome 9 Contains a
              pseudogene similar to part of BMS1-like, ribosome assembly
              protein (yeast) (BMS1L) a immunoglobulin kappa variable 1-5
              (IGKV1-5) pseudogene, three novel pseudogenes, a zinc
              finger pseudogene, a pseudogene similar to tripartite
              motif-containing protein and two CpG islands, complete
              sequence
          Length = 165474

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 282    ccaacaagagaaagcaggaa 301
              ||||||||||||||||||||
Sbjct: 113358 ccaacaagagaaagcaggaa 113339
to top
>gb|AE014829.1| Plasmodium falciparum 3D7 chromosome 10 section 1 of 7 of the complete
              sequence
          Length = 250078

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     taataatatatacacatatt 110
              ||||||||||||||||||||
Sbjct: 141513 taataatatatacacatatt 141532
to top
>emb|AL356473.11| Human DNA sequence from clone RP11-560O20 on chromosome 6 Contains a
             nucleoporin 50kD (NUP50) pseudogene  and a CpG island,
             complete sequence
          Length = 203182

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   ccaacaagagaaagcaggaa 301
             ||||||||||||||||||||
Sbjct: 54731 ccaacaagagaaagcaggaa 54750
to top
>emb|AL354692.23| Human DNA sequence from clone RP11-361M4 on chromosome 9 Contains a
            novel pseudogene, complete sequence
          Length = 110443

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 282  ccaacaagagaaagcaggaa 301
            ||||||||||||||||||||
Sbjct: 2524 ccaacaagagaaagcaggaa 2505
to top
>emb|AL354657.12| Human DNA sequence from clone GS1-80M18 on chromosome 1, complete
             sequence
          Length = 60059

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   ccaacaagagaaagcaggaa 301
             ||||||||||||||||||||
Sbjct: 10171 ccaacaagagaaagcaggaa 10152
to top
>emb|AL353667.10| Human DNA sequence from clone RP11-125B21 on chromosome 9p24.1-24.3
              Contains the 3' end of a novel gene (FLJ35024), complete
              sequence
          Length = 168366

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    ccaacaagagaaagcaggaa 301
              ||||||||||||||||||||
Sbjct: 138391 ccaacaagagaaagcaggaa 138410
to top
>emb|AL158210.12| Human DNA sequence from clone RP11-554I8 on chromosome 10 Contains two
             novel genes, complete sequence
          Length = 134826

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    ataatatatacacatatttt 112
             ||||||||||||||||||||
Sbjct: 89033 ataatatatacacatatttt 89052
to top
>emb|AL139400.9| Human DNA sequence from clone RP13-36G14 on chromosome Xq13.1-13.3
             Contains the 3' end of a novel gene, a laminin receptor 1
             (ribosomal protein SA, 67 KDa, LAMR1) pseudogene, a scotin
             pseudogene and a novel alanyl-tRNA synthetase protein
             pseudogene, complete sequence
          Length = 87430

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   ccaacaagagaaagcaggaa 301
             ||||||||||||||||||||
Sbjct: 59544 ccaacaagagaaagcaggaa 59525
to top
>emb|AL139000.9| Human DNA sequence from clone RP11-173M10 on chromosome 13q14.3-21.31,
             complete sequence
          Length = 157028

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   ccaacaagagaaagcaggaa 301
             ||||||||||||||||||||
Sbjct: 68094 ccaacaagagaaagcaggaa 68113
to top
>gb|AC107204.4| Homo sapiens 3p BAC RP11-655A17 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 170799

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   ccaacaagagaaagcaggaa 301
             ||||||||||||||||||||
Sbjct: 52267 ccaacaagagaaagcaggaa 52286
to top
>emb|Y18276.1|MMU18276 Mus musculus mRNA for neurobeachin
          Length = 10949

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 181  tcatacattttggccaggta 200
            ||||||||||||||||||||
Sbjct: 3324 tcatacattttggccaggta 3305
to top
>gb|AC106606.5| Rattus norvegicus 1 BAC CH230-148J18 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 227298

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   ataaaccaagagaaagcaga 140
             ||||||||||||||||||||
Sbjct: 86202 ataaaccaagagaaagcaga 86183
to top
>emb|AL031745.8|PFMAL1P2 Plasmodium falciparum DNA from MAL1P2
          Length = 384550

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     aataatatatacacatattt 111
              ||||||||||||||||||||
Sbjct: 158754 aataatatatacacatattt 158735
to top
>gb|AC108709.3| Homo sapiens 3 BAC RP11-81P15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 179223

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    ccaacaagagaaagcaggaa 301
              ||||||||||||||||||||
Sbjct: 107424 ccaacaagagaaagcaggaa 107443
to top
>gb|AC116158.5| Homo sapiens chromosome , clone RP11-102L12, complete sequence
          Length = 159236

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    aataatatatacacatattt 111
             ||||||||||||||||||||
Sbjct: 32958 aataatatatacacatattt 32939
to top
>emb|CR392335.5| Zebrafish DNA sequence from clone CH211-161C21 in linkage group 1,
             complete sequence
          Length = 103171

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    ataatatatacacatatttt 112
             ||||||||||||||||||||
Sbjct: 89521 ataatatatacacatatttt 89502
to top
>gb|AC097105.10| Homo sapiens 3 BAC RP11-119P22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 111122

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   aaccaagagaaagcagaaat 143
             ||||||||||||||||||||
Sbjct: 55706 aaccaagagaaagcagaaat 55725
to top
>dbj|BS000663.2| Pan troglodytes chromosome Y clone: PTB-620F03, complete sequence
          Length = 181989

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   ccaacaagagaaagcaggaa 301
             ||||||||||||||||||||
Sbjct: 41516 ccaacaagagaaagcaggaa 41535
to top
>dbj|BS000601.1| Pan troglodytes chromosome Y clone:PTB-291L09, complete sequences
          Length = 145031

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   ccaacaagagaaagcaggaa 301
             ||||||||||||||||||||
Sbjct: 41517 ccaacaagagaaagcaggaa 41536
to top
>gb|AC025265.21| Homo sapiens 12 BAC RP11-341G23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 180064

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    ccaacaagagaaagcaggaa 301
              ||||||||||||||||||||
Sbjct: 162912 ccaacaagagaaagcaggaa 162931
to top
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 282      ccaacaagagaaagcaggaa 301
                ||||||||||||||||||||
Sbjct: 14633499 ccaacaagagaaagcaggaa 14633480
to top
>dbj|AK125132.1| Homo sapiens cDNA FLJ43142 fis, clone CTONG3007870
          Length = 3266

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 282  ccaacaagagaaagcaggaa 301
            ||||||||||||||||||||
Sbjct: 3038 ccaacaagagaaagcaggaa 3057
to top
>gb|AC108745.7| Homo sapiens 3 BAC RP11-232M24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 68296

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   ccaacaagagaaagcaggaa 301
             ||||||||||||||||||||
Sbjct: 42962 ccaacaagagaaagcaggaa 42943
to top
>gb|AC012598.16| Homo sapiens 3 BAC RP11-237K10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 163538

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    ccaacaagagaaagcaggaa 301
              ||||||||||||||||||||
Sbjct: 113432 ccaacaagagaaagcaggaa 113451
to top
>gb|AC109631.4| Homo sapiens chromosome , clone RP11-9J12, complete sequence
          Length = 172321

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    aataatatatacacatattt 111
             ||||||||||||||||||||
Sbjct: 67637 aataatatatacacatattt 67656
to top
>gb|AC068299.21| Homo sapiens 3 BAC RP11-560F18 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 70466

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 282  ccaacaagagaaagcaggaa 301
            ||||||||||||||||||||
Sbjct: 2779 ccaacaagagaaagcaggaa 2798
to top
>gb|AC107055.3| Homo sapiens BAC clone RP11-436G13 from 4, complete sequence
          Length = 144794

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 282  ccaacaagagaaagcaggaa 301
            ||||||||||||||||||||
Sbjct: 1471 ccaacaagagaaagcaggaa 1490
to top
>gb|AC093874.3| Homo sapiens BAC clone RP11-624O16 from 4, complete sequence
          Length = 158245

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    ccaacaagagaaagcaggaa 301
              ||||||||||||||||||||
Sbjct: 157716 ccaacaagagaaagcaggaa 157735
to top
>gb|AC093555.2| Homo sapiens chromosome 3 clone RP11-30A19, complete sequence
          Length = 163790

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   ccaacaagagaaagcaggaa 301
             ||||||||||||||||||||
Sbjct: 99016 ccaacaagagaaagcaggaa 98997
to top
>gb|AC025538.6| Homo sapiens BAC clone RP11-274J2 from 4, complete sequence
          Length = 161478

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    ccaacaagagaaagcaggaa 301
              ||||||||||||||||||||
Sbjct: 130450 ccaacaagagaaagcaggaa 130469
to top
>gb|AC090497.2|AC090497 Homo sapiens chromosome 7 clone RP11-643E1, complete sequence
          Length = 169199

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   ccaacaagagaaagcaggaa 301
             ||||||||||||||||||||
Sbjct: 15761 ccaacaagagaaagcaggaa 15780
to top
>gb|AC096716.3| Homo sapiens BAC clone RP11-8L2 from 4, complete sequence
          Length = 145634

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 282    ccaacaagagaaagcaggaa 301
              ||||||||||||||||||||
Sbjct: 100053 ccaacaagagaaagcaggaa 100034
to top
>gb|AC093773.3| Homo sapiens BAC clone RP11-127A9 from 4, complete sequence
          Length = 167011

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     taatatatacacatatttta 113
              ||||||||||||||||||||
Sbjct: 141768 taatatatacacatatttta 141749
to top
>gb|AC009481.4|AC009481 Homo sapiens BAC clone RP11-303D3 from 1, complete sequence
          Length = 191896

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   ccaacaagagaaagcaggaa 301
             ||||||||||||||||||||
Sbjct: 47896 ccaacaagagaaagcaggaa 47915
to top
>gb|AC083870.2|AC083870 Homo sapiens chromosome 7 clone RP11-248K17, complete sequence
          Length = 171530

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    ccaacaagagaaagcaggaa 301
              ||||||||||||||||||||
Sbjct: 155717 ccaacaagagaaagcaggaa 155736
to top
>gb|AC139365.3| Homo sapiens chromosome 8, clone RP11-643N23, complete sequence
          Length = 185549

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 282    ccaacaagagaaagcaggaa 301
              ||||||||||||||||||||
Sbjct: 143836 ccaacaagagaaagcaggaa 143817
to top
>gb|AC137719.5| Homo sapiens chromosome 8, clone RP11-260I22, complete sequence
          Length = 171164

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 282  ccaacaagagaaagcaggaa 301
            ||||||||||||||||||||
Sbjct: 4638 ccaacaagagaaagcaggaa 4619
to top
>gb|AC121253.3| Homo sapiens chromosome 3 clone RP11-208G16, complete sequence
          Length = 142193

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   ccaacaagagaaagcaggaa 301
             ||||||||||||||||||||
Sbjct: 89517 ccaacaagagaaagcaggaa 89498
to top
>gb|AC112187.2| Homo sapiens chromosome 5 clone RP11-269M20, complete sequence
          Length = 186165

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   ccaacaagagaaagcaggaa 301
             ||||||||||||||||||||
Sbjct: 23059 ccaacaagagaaagcaggaa 23040
to top
>gb|AC138624.4| Mus musculus BAC clone RP23-187N1 from chromosome 7, complete sequence
          Length = 226264

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     ccaaatacaatcatcaaacc 41
              ||||||||||||||||||||
Sbjct: 161448 ccaaatacaatcatcaaacc 161429
to top
>dbj|BS000085.1| Pan troglodytes chromosome 22 clone:RP43-164H01, map 22, complete
             sequences
          Length = 171357

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    taatatatacacatatttta 113
             ||||||||||||||||||||
Sbjct: 83153 taatatatacacatatttta 83134
to top
>gb|AC155269.2| Mus musculus BAC clone RP23-215E17 from 12, complete sequence
          Length = 198927

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 94     taatatatacacatatttta 113
              ||||||||||||||||||||
Sbjct: 110006 taatatatacacatatttta 110025
to top
>emb|AL445643.12| Human DNA sequence from clone RP11-350D23 on chromosome 9, complete
             sequence
          Length = 188693

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   ccaacaagagaaagcaggaa 301
             ||||||||||||||||||||
Sbjct: 66142 ccaacaagagaaagcaggaa 66123
to top
>gb|AY105671.1| Zea mays PCO084217 mRNA sequence
          Length = 1398

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 40/46 (86%), Gaps = 3/46 (6%)
 Strand = Plus / Minus

                                                          
Query: 265  acatagcctaatggcta---ccaacaagagaaagcaggaacgtccg 307
            ||||||||||||||| |   |||||||| ||||| |||||||||||
Sbjct: 1096 acatagcctaatggccatgaccaacaagtgaaagaaggaacgtccg 1051
to top
>gb|AC006442.1|AC006442 Homo sapiens, clone hRPK.7_A_1, complete sequence
          Length = 155935

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 282    ccaacaagagaaagcaggaa 301
              ||||||||||||||||||||
Sbjct: 110035 ccaacaagagaaagcaggaa 110016
to top
>dbj|AP001669.1| Homo sapiens genomic DNA, chromosome 21q, section 13/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    ccaacaagagaaagcaggaa 301
              ||||||||||||||||||||
Sbjct: 123490 ccaacaagagaaagcaggaa 123509
to top
>ref|NG_000002.1| Homo sapiens immunoglobulin lambda locus (IGL@) on chromosome 22
          Length = 909203

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   ccaacaagagaaagcaggaa 301
             ||||||||||||||||||||
Sbjct: 32789 ccaacaagagaaagcaggaa 32770
to top
>dbj|AP000457.3| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B159E1,
            LL56-APP region, complete sequence
          Length = 165221

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 282  ccaacaagagaaagcaggaa 301
            ||||||||||||||||||||
Sbjct: 7876 ccaacaagagaaagcaggaa 7895
to top
>dbj|D87004.2| Homo sapiens immunoglobulin lambda gene locus DNA, clone:4E7
          Length = 13993

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 282 ccaacaagagaaagcaggaa 301
           ||||||||||||||||||||
Sbjct: 998 ccaacaagagaaagcaggaa 979


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,276,644
Number of Sequences: 3902068
Number of extensions: 3276644
Number of successful extensions: 122968
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 122550
Number of HSP's gapped (non-prelim): 418
length of query: 308
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 286
effective length of database: 17,147,199,772
effective search space: 4904099134792
effective search space used: 4904099134792
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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