ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26e20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK103622.1| Oryza sativa (japonica cultivar-group) cDNA clon... 303 4e-79
2ref|XM_468714.1| Oryza sativa (japonica cultivar-group), mRNA 301 2e-78
3gb|BT018155.1| Zea mays clone EL01N0556A12.c mRNA sequence 210 4e-51
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 204 3e-49
5gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 genom... 204 3e-49
6gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genom... 204 3e-49
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 204 3e-49
8gb|AY104791.1| Zea mays PCO102820 mRNA sequence 202 1e-48
9gb|AY347861.1| Malus x domestica clone 27-3 ARE-1-like mRNA, par... 74 7e-10
10gb|BT004525.1| Arabidopsis thaliana At1g71270/F3I17_8 gene, comp... 66 2e-07
11ref|NM_105796.2| Arabidopsis thaliana POK (POKY POLLEN TUBE) AT1... 58 4e-05
12dbj|AK221995.1| Arabidopsis thaliana mRNA for ARE1-like protein,... 58 4e-05
13gb|AF367286.1|AF367286 Arabidopsis thaliana At1g71270/F3I17_8 mR... 58 4e-05
14tpg|BK000522.1| TPA: TPA_exp: Arabidopsis thaliana ARE1-like pro... 50 0.009
15gb|AY859551.1| Anoplodactylus portus 18S ribosomal RNA gene, par... 46 0.15
16ref|NM_105799.1| Arabidopsis thaliana unknown protein AT1G71300 ... 42 2.3
17ref|NM_105800.2| Arabidopsis thaliana unknown protein AT1G71310 ... 42 2.3
18gb|BT012873.1| Lycopersicon esculentum clone 113972R, mRNA sequence 42 2.3
19emb|AJ719341.1| Gallus gallus mRNA for hypothetical protein, clo... 42 2.3
20ref|NM_001008468.1| Gallus gallus transmembrane protein 34 (TMEM... 42 2.3
21gb|AC162927.3| Mus musculus BAC clone RP23-269E12 from chromosom... 42 2.3
22gb|AC010638.7|AC010638 Homo sapiens chromosome 5 clone CTD-2350J... 42 2.3
23tpg|BK000523.1| TPA: TPA_exp: Arabidopsis thaliana ARE1-like pro... 42 2.3
24gb|AC016162.5|AC016162 Arabidopsis thaliana chromosome 1 BAC F3I... 42 2.3
25gb|AC138118.4| Mus musculus BAC clone RP24-219A21 from 8, comple... 42 2.3
26emb|AL831710.8| Mouse DNA sequence from clone RP23-29K19 on chro... 42 2.3
27gb|AE008426.1| Streptococcus pneumoniae R6 section 42 of 184 of ... 40 9.1
28gb|AC163679.3| Mus musculus BAC clone RP24-104E24 from chromosom... 40 9.1
29ref|XM_369165.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 40 9.1
30gb|AC164293.2| Mus musculus BAC clone RP24-208N14 from chromosom... 40 9.1
31gb|AC138638.11| Mus musculus chromosome 8, clone RP23-380M21, co... 40 9.1
32gb|AC093866.3| Homo sapiens BAC clone RP11-582C12 from 4, comple... 40 9.1
33gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 9.1
34gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome 40 9.1
35gb|AE005067.1| Halobacterium sp. NRC-1 section 98 of 170 of the ... 40 9.1
36gb|AC154216.1| Mus musculus BAC clone RP24-354I21 from 13, compl... 40 9.1
37gb|BC105840.1| Rattus norvegicus similar to hypothetical protein... 40 9.1
38gb|AC141438.4| Mus musculus BAC clone RP23-212C9 from 9, complet... 40 9.1
39gb|AC102210.6| Mus musculus chromosome 8, clone RP24-351F4, comp... 40 9.1 
>dbj|AK103622.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133M18, full
            insert sequence
          Length = 2602

 Score =  303 bits (153), Expect = 4e-79
 Identities = 369/441 (83%)
 Strand = Plus / Minus

                                                                        
Query: 213  actaaaaagtcctagagtatttcttgatctcatacaggatggaggatatggataccaggt 272
            ||||||| ||||| |||||||||||||||||||| | ||| ||||||||||| |||||||
Sbjct: 2249 actaaaaggtcctggagtatttcttgatctcatataagatagaggatatggaaaccaggt 2190

                                                                        
Query: 273  ccttgttgagggccgagccgccgttgaccctcttgacgcactcggtcagcctcgtgtagt 332
            |||||||||| || ||||| || |||| | ||||||| |||||||| | ||| || ||||
Sbjct: 2189 ccttgttgagagcagagccaccattgatcttcttgacacactcggtgatccttgtatagt 2130

                                                                        
Query: 333  acaggagcagctgcgtgagagccgctttcaggatctccatcccacacaggaagttgctga 392
            |||| |||||||||||||| |||||||||||||||||||| || || ||||||||||| |
Sbjct: 2129 acagcagcagctgcgtgagtgccgctttcaggatctccattccgcagaggaagttgctaa 2070

                                                                        
Query: 393  aggatgtgatgacgtccttgtgcatcagctcgatcgcggccttccatcggctcgcgaaat 452
            | ||||| ||||| ||||||||||| ||||| || || || ||||| || |  || ||||
Sbjct: 2069 aagatgtaatgacatccttgtgcataagctcaattgcagctttccaccgaccggcaaaat 2010

                                                                        
Query: 453  ccttcaccagcggctccacgtcgccgatgctggccttgtctgaactcgaggcagagtctt 512
            |||| || |  ||||| || || |  |  ||||||||||| || || || || | |||||
Sbjct: 2009 ccttgactaatggctcgacatcactaacactggccttgtccgagcttgatgctgtgtctt 1950

                                                                        
Query: 513  ccgatgtgcgcgttttgacaaacttgatcaagtcactgaaatgctccataagcacttcct 572
            | || | ||| | ||| ||||| |||||||| ||||||||||||||||  || | |||||
Sbjct: 1949 cagacgggcgagatttcacaaatttgatcaaatcactgaaatgctccagtagaagttcct 1890

                                                                        
Query: 573  ccacatatattgcaatgttgctcttaagaacctcctcgaagtgaagttgtgtttttccac 632
            ||||||||| || ||| |||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 1889 ccacatatactgaaatattgctcttaagaacctcctcaaagtgaacttgtgcttttccac 1830

                                 
Query: 633  cctcggtgccagcttccttca 653
            |||| ||||||||||||||||
Sbjct: 1829 cctcagtgccagcttccttca 1809
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>ref|XM_468714.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2109

 Score =  301 bits (152), Expect = 2e-78
 Identities = 368/440 (83%)
 Strand = Plus / Minus

                                                                        
Query: 214  ctaaaaagtcctagagtatttcttgatctcatacaggatggaggatatggataccaggtc 273
            |||||| ||||| |||||||||||||||||||| | ||| ||||||||||| ||||||||
Sbjct: 2109 ctaaaaggtcctggagtatttcttgatctcatataagatagaggatatggaaaccaggtc 2050

                                                                        
Query: 274  cttgttgagggccgagccgccgttgaccctcttgacgcactcggtcagcctcgtgtagta 333
            ||||||||| || ||||| || |||| | ||||||| |||||||| | ||| || |||||
Sbjct: 2049 cttgttgagagcagagccaccattgatcttcttgacacactcggtgatccttgtatagta 1990

                                                                        
Query: 334  caggagcagctgcgtgagagccgctttcaggatctccatcccacacaggaagttgctgaa 393
            ||| |||||||||||||| |||||||||||||||||||| || || ||||||||||| ||
Sbjct: 1989 cagcagcagctgcgtgagtgccgctttcaggatctccattccgcagaggaagttgctaaa 1930

                                                                        
Query: 394  ggatgtgatgacgtccttgtgcatcagctcgatcgcggccttccatcggctcgcgaaatc 453
             ||||| ||||| ||||||||||| ||||| || || || ||||| || |  || |||||
Sbjct: 1929 agatgtaatgacatccttgtgcataagctcaattgcagctttccaccgaccggcaaaatc 1870

                                                                        
Query: 454  cttcaccagcggctccacgtcgccgatgctggccttgtctgaactcgaggcagagtcttc 513
            ||| || |  ||||| || || |  |  ||||||||||| || || || || | ||||||
Sbjct: 1869 cttgactaatggctcgacatcactaacactggccttgtccgagcttgatgctgtgtcttc 1810

                                                                        
Query: 514  cgatgtgcgcgttttgacaaacttgatcaagtcactgaaatgctccataagcacttcctc 573
             || | ||| | ||| ||||| |||||||| ||||||||||||||||  || | ||||||
Sbjct: 1809 agacgggcgagatttcacaaatttgatcaaatcactgaaatgctccagtagaagttcctc 1750

                                                                        
Query: 574  cacatatattgcaatgttgctcttaagaacctcctcgaagtgaagttgtgtttttccacc 633
            |||||||| || ||| |||||||||||||||||||| ||||||| ||||| |||||||||
Sbjct: 1749 cacatatactgaaatattgctcttaagaacctcctcaaagtgaacttgtgcttttccacc 1690

                                
Query: 634  ctcggtgccagcttccttca 653
            ||| ||||||||||||||||
Sbjct: 1689 ctcagtgccagcttccttca 1670
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>gb|BT018155.1| Zea mays clone EL01N0556A12.c mRNA sequence
          Length = 1362

 Score =  210 bits (106), Expect = 4e-51
 Identities = 232/274 (84%)
 Strand = Plus / Minus

                                                                        
Query: 213  actaaaaagtcctagagtatttcttgatctcatacaggatggaggatatggataccaggt 272
            ||||||| |||||||| || |||||||| ||  ||||||||||||||||||| || ||||
Sbjct: 1143 actaaaacgtcctagaatacttcttgatttcgaacaggatggaggatatggagacaaggt 1084

                                                                        
Query: 273  ccttgttgagggccgagccgccgttgaccctcttgacgcactcggtcagcctcgtgtagt 332
            |||||||||| || |||||||||||||  |||||||| |||||||  ||||| |||||||
Sbjct: 1083 ccttgttgagagcagagccgccgttgattctcttgacacactcggagagcctggtgtagt 1024

                                                                        
Query: 333  acaggagcagctgcgtgagagccgctttcaggatctccatcccacacaggaagttgctga 392
            | || || ||||| | ||| | |||| ||| |||||||||||| || || ||||||||||
Sbjct: 1023 atagcaggagctgtgcgagcgtcgctctcaagatctccatcccgcaaagaaagttgctga 964

                                                                        
Query: 393  aggatgtgatgacgtccttgtgcatcagctcgatcgcggccttccatcggctcgcgaaat 452
            | |||||||| || || | ||||||||||||||||||||||||  | |||||||||||||
Sbjct: 963  aagatgtgatcacatcatagtgcatcagctcgatcgcggccttataccggctcgcgaaat 904

                                              
Query: 453  ccttcaccagcggctccacgtcgccgatgctggc 486
            |||| ||||| ||||| || ||| | ||||||||
Sbjct: 903  cctttaccagtggctcaacttcggcaatgctggc 870



 Score =  103 bits (52), Expect = 7e-19
 Identities = 107/124 (86%), Gaps = 1/124 (0%)
 Strand = Plus / Minus

                                                                       
Query: 547 actgaaatgctccataagcacttcctccacatatattgcaatgttgctcttaagaacctc 606
           |||||| |||||||  ||||  || |||||||||||||| ||||||||||||||||||||
Sbjct: 809 actgaactgctccaggagcaactcttccacatatattgcgatgttgctcttaagaacctc 750

                                                                       
Query: 607 ctcgaagtgaagttgtgtttttcca-ccctcggtgccagcttccttcaatacggcaattg 665
           |||||||||  |||||| ||| ||| ||||| || |||||||||||||| | || |||||
Sbjct: 749 ctcgaagtgttgttgtgctttcccacccctcagttccagcttccttcaaaatggaaattg 690

               
Query: 666 ttaa 669
           ||||
Sbjct: 689 ttaa 686
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  204 bits (103), Expect = 3e-49
 Identities = 184/211 (87%)
 Strand = Plus / Plus

                                                                            
Query: 213      actaaaaagtcctagagtatttcttgatctcatacaggatggaggatatggataccaggt 272
                ||||||| ||||| |||||||||||||||||||| | ||| ||||||||||| |||||||
Sbjct: 17189092 actaaaaggtcctggagtatttcttgatctcatataagatagaggatatggaaaccaggt 17189151

                                                                            
Query: 273      ccttgttgagggccgagccgccgttgaccctcttgacgcactcggtcagcctcgtgtagt 332
                |||||||||| || ||||| || |||| | ||||||| |||||||| | ||| || ||||
Sbjct: 17189152 ccttgttgagagcagagccaccattgatcttcttgacacactcggtgatccttgtatagt 17189211

                                                                            
Query: 333      acaggagcagctgcgtgagagccgctttcaggatctccatcccacacaggaagttgctga 392
                |||| |||||||||||||| |||||||||||||||||||| || || ||||||||||| |
Sbjct: 17189212 acagcagcagctgcgtgagtgccgctttcaggatctccattccgcagaggaagttgctaa 17189271

                                               
Query: 393      aggatgtgatgacgtccttgtgcatcagctc 423
                | ||||| ||||| ||||||||||| |||||
Sbjct: 17189272 aagatgtaatgacatccttgtgcataagctc 17189302



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 71/78 (91%)
 Strand = Plus / Plus

                                                                            
Query: 573      ccacatatattgcaatgttgctcttaagaacctcctcgaagtgaagttgtgtttttccac 632
                ||||||||| || ||| |||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 17189994 ccacatatactgaaatattgctcttaagaacctcctcaaagtgaacttgtgcttttccac 17190053

                                  
Query: 633      cctcggtgccagcttcct 650
                |||| |||||||||||||
Sbjct: 17190054 cctcagtgccagcttcct 17190071



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 530      acaaacttgatcaagtcactgaaatgctcca 560
                ||||| |||||||| ||||||||||||||||
Sbjct: 17189489 acaaatttgatcaaatcactgaaatgctcca 17189519
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>gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 genomic sequence, complete
             sequence
          Length = 115326

 Score =  204 bits (103), Expect = 3e-49
 Identities = 184/211 (87%)
 Strand = Plus / Plus

                                                                         
Query: 213   actaaaaagtcctagagtatttcttgatctcatacaggatggaggatatggataccaggt 272
             ||||||| ||||| |||||||||||||||||||| | ||| ||||||||||| |||||||
Sbjct: 21836 actaaaaggtcctggagtatttcttgatctcatataagatagaggatatggaaaccaggt 21895

                                                                         
Query: 273   ccttgttgagggccgagccgccgttgaccctcttgacgcactcggtcagcctcgtgtagt 332
             |||||||||| || ||||| || |||| | ||||||| |||||||| | ||| || ||||
Sbjct: 21896 ccttgttgagagcagagccaccattgatcttcttgacacactcggtgatccttgtatagt 21955

                                                                         
Query: 333   acaggagcagctgcgtgagagccgctttcaggatctccatcccacacaggaagttgctga 392
             |||| |||||||||||||| |||||||||||||||||||| || || ||||||||||| |
Sbjct: 21956 acagcagcagctgcgtgagtgccgctttcaggatctccattccgcagaggaagttgctaa 22015

                                            
Query: 393   aggatgtgatgacgtccttgtgcatcagctc 423
             | ||||| ||||| ||||||||||| |||||
Sbjct: 22016 aagatgtaatgacatccttgtgcataagctc 22046



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 71/78 (91%)
 Strand = Plus / Plus

                                                                         
Query: 573   ccacatatattgcaatgttgctcttaagaacctcctcgaagtgaagttgtgtttttccac 632
             ||||||||| || ||| |||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 22738 ccacatatactgaaatattgctcttaagaacctcctcaaagtgaacttgtgcttttccac 22797

                               
Query: 633   cctcggtgccagcttcct 650
             |||| |||||||||||||
Sbjct: 22798 cctcagtgccagcttcct 22815



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 530   acaaacttgatcaagtcactgaaatgctcca 560
             ||||| |||||||| ||||||||||||||||
Sbjct: 22233 acaaatttgatcaaatcactgaaatgctcca 22263
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>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete
             sequence
          Length = 153247

 Score =  204 bits (103), Expect = 3e-49
 Identities = 184/211 (87%)
 Strand = Plus / Plus

                                                                         
Query: 213   actaaaaagtcctagagtatttcttgatctcatacaggatggaggatatggataccaggt 272
             ||||||| ||||| |||||||||||||||||||| | ||| ||||||||||| |||||||
Sbjct: 80485 actaaaaggtcctggagtatttcttgatctcatataagatagaggatatggaaaccaggt 80544

                                                                         
Query: 273   ccttgttgagggccgagccgccgttgaccctcttgacgcactcggtcagcctcgtgtagt 332
             |||||||||| || ||||| || |||| | ||||||| |||||||| | ||| || ||||
Sbjct: 80545 ccttgttgagagcagagccaccattgatcttcttgacacactcggtgatccttgtatagt 80604

                                                                         
Query: 333   acaggagcagctgcgtgagagccgctttcaggatctccatcccacacaggaagttgctga 392
             |||| |||||||||||||| |||||||||||||||||||| || || ||||||||||| |
Sbjct: 80605 acagcagcagctgcgtgagtgccgctttcaggatctccattccgcagaggaagttgctaa 80664

                                            
Query: 393   aggatgtgatgacgtccttgtgcatcagctc 423
             | ||||| ||||| ||||||||||| |||||
Sbjct: 80665 aagatgtaatgacatccttgtgcataagctc 80695



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 71/78 (91%)
 Strand = Plus / Plus

                                                                         
Query: 573   ccacatatattgcaatgttgctcttaagaacctcctcgaagtgaagttgtgtttttccac 632
             ||||||||| || ||| |||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 81387 ccacatatactgaaatattgctcttaagaacctcctcaaagtgaacttgtgcttttccac 81446

                               
Query: 633   cctcggtgccagcttcct 650
             |||| |||||||||||||
Sbjct: 81447 cctcagtgccagcttcct 81464



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 530   acaaacttgatcaagtcactgaaatgctcca 560
             ||||| |||||||| ||||||||||||||||
Sbjct: 80882 acaaatttgatcaaatcactgaaatgctcca 80912
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  204 bits (103), Expect = 3e-49
 Identities = 184/211 (87%)
 Strand = Plus / Plus

                                                                            
Query: 213      actaaaaagtcctagagtatttcttgatctcatacaggatggaggatatggataccaggt 272
                ||||||| ||||| |||||||||||||||||||| | ||| ||||||||||| |||||||
Sbjct: 17182661 actaaaaggtcctggagtatttcttgatctcatataagatagaggatatggaaaccaggt 17182720

                                                                            
Query: 273      ccttgttgagggccgagccgccgttgaccctcttgacgcactcggtcagcctcgtgtagt 332
                |||||||||| || ||||| || |||| | ||||||| |||||||| | ||| || ||||
Sbjct: 17182721 ccttgttgagagcagagccaccattgatcttcttgacacactcggtgatccttgtatagt 17182780

                                                                            
Query: 333      acaggagcagctgcgtgagagccgctttcaggatctccatcccacacaggaagttgctga 392
                |||| |||||||||||||| |||||||||||||||||||| || || ||||||||||| |
Sbjct: 17182781 acagcagcagctgcgtgagtgccgctttcaggatctccattccgcagaggaagttgctaa 17182840

                                               
Query: 393      aggatgtgatgacgtccttgtgcatcagctc 423
                | ||||| ||||| ||||||||||| |||||
Sbjct: 17182841 aagatgtaatgacatccttgtgcataagctc 17182871



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 71/78 (91%)
 Strand = Plus / Plus

                                                                            
Query: 573      ccacatatattgcaatgttgctcttaagaacctcctcgaagtgaagttgtgtttttccac 632
                ||||||||| || ||| |||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 17183563 ccacatatactgaaatattgctcttaagaacctcctcaaagtgaacttgtgcttttccac 17183622

                                  
Query: 633      cctcggtgccagcttcct 650
                |||| |||||||||||||
Sbjct: 17183623 cctcagtgccagcttcct 17183640



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 530      acaaacttgatcaagtcactgaaatgctcca 560
                ||||| |||||||| ||||||||||||||||
Sbjct: 17183058 acaaatttgatcaaatcactgaaatgctcca 17183088
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>gb|AY104791.1| Zea mays PCO102820 mRNA sequence
          Length = 1279

 Score =  202 bits (102), Expect = 1e-48
 Identities = 231/274 (84%)
 Strand = Plus / Minus

                                                                        
Query: 213  actaaaaagtcctagagtatttcttgatctcatacaggatggaggatatggataccaggt 272
            ||||||| |||||||| || |||||||  ||  ||||||||||||||||||| || ||||
Sbjct: 1277 actaaaacgtcctagaatacttcttgacttcgaacaggatggaggatatggagacaaggt 1218

                                                                        
Query: 273  ccttgttgagggccgagccgccgttgaccctcttgacgcactcggtcagcctcgtgtagt 332
            |||||||||| || |||||||||||||  |||||||| |||||||  ||||| |||||||
Sbjct: 1217 ccttgttgagagcagagccgccgttgattctcttgacacactcggagagcctggtgtagt 1158

                                                                        
Query: 333  acaggagcagctgcgtgagagccgctttcaggatctccatcccacacaggaagttgctga 392
            | || || ||||| | ||| | |||| ||| |||||||||||| || || ||||||||||
Sbjct: 1157 atagcaggagctgtgcgagcgtcgctctcaagatctccatcccgcaaagaaagttgctga 1098

                                                                        
Query: 393  aggatgtgatgacgtccttgtgcatcagctcgatcgcggccttccatcggctcgcgaaat 452
            | |||||||| || || | ||||||||||||||||||||||||  | |||||||||||||
Sbjct: 1097 aagatgtgatcacatcatagtgcatcagctcgatcgcggccttataccggctcgcgaaat 1038

                                              
Query: 453  ccttcaccagcggctccacgtcgccgatgctggc 486
            |||| ||||| ||||| || ||| | ||||||||
Sbjct: 1037 cctttaccagtggctcaacttcggcaatgctggc 1004



 Score =  117 bits (59), Expect = 5e-23
 Identities = 107/123 (86%)
 Strand = Plus / Minus

                                                                       
Query: 547 actgaaatgctccataagcacttcctccacatatattgcaatgttgctcttaagaacctc 606
           |||||| |||||||  ||||  || |||||||||||||| ||||||||||||||||||||
Sbjct: 943 actgaactgctccaggagcaactcttccacatatattgcgatgttgctcttaagaacctc 884

                                                                       
Query: 607 ctcgaagtgaagttgtgtttttccaccctcggtgccagcttccttcaatacggcaattgt 666
           |||||||||  |||||| ||| |||||||| || |||||||||||||| | || ||||||
Sbjct: 883 ctcgaagtgttgttgtgctttcccaccctcagttccagcttccttcaaaatggaaattgt 824

              
Query: 667 taa 669
           |||
Sbjct: 823 taa 821
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>gb|AY347861.1| Malus x domestica clone 27-3 ARE-1-like mRNA, partial sequence
          Length = 446

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                       
Query: 364 gatctccatcccacacaggaagttgctgaaggatgtgatgacgtccttgtgcatcagctc 423
           ||||||||| |||||||||||||||||||| || || ||||| || ||||||||||| ||
Sbjct: 166 gatctccataccacacaggaagttgctgaaagaagttatgacatctttgtgcatcagttc 107

                            
Query: 424 gatcgcggccttccatc 440
           ||| || || |||||||
Sbjct: 106 gattgcagctttccatc 90
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>gb|BT004525.1| Arabidopsis thaliana At1g71270/F3I17_8 gene, complete cds
          Length = 2124

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                        
Query: 368  tccatcccacacaggaagttgctgaaggatgtgatgacgtccttgtgcatcagctcgatc 427
            ||||| ||||||| |||||| |||||||| || |||| ||| |||| ||||| ||| |||
Sbjct: 1970 tccataccacacaagaagttactgaaggaagttatgatgtctttgtccatcaactcaatc 1911

                                                     
Query: 428  gcggccttccatcggctcgcgaaatccttcaccagcggctc 468
            || | |||||||| |||  | || |||||||||||||||||
Sbjct: 1910 gctgtcttccatctgcttccaaagtccttcaccagcggctc 1870



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 536  ttgatcaagtcactgaaatgctccataagcacttcctccaca 577
            |||||||| ||||||||||||||||  |||| ||| ||||||
Sbjct: 1799 ttgatcaaatcactgaaatgctccaccagcagttcttccaca 1758
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>ref|NM_105796.2| Arabidopsis thaliana POK (POKY POLLEN TUBE) AT1G71270 (POK) mRNA,
            complete cds
          Length = 2463

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                        
Query: 368  tccatcccacacaggaagttgctgaaggatgtgatgacgtccttgtgcatcagctcgatc 427
            ||||| ||||||| |||||| |||||||| || |||| ||| |||| ||||| ||| |||
Sbjct: 2111 tccataccacacaagaagttactgaaggaagttatgatgtctttgtccatcaactcaatc 2052

                                                     
Query: 428  gcggccttccatcggctcgcgaaatccttcaccagcggctc 468
            || | |||||||| |||  | || ||||||||||| |||||
Sbjct: 2051 gctgtcttccatctgcttccaaagtccttcaccagtggctc 2011



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 536  ttgatcaagtcactgaaatgctccataagcacttcctccaca 577
            |||||||| ||||||||||||||||  |||| ||| ||||||
Sbjct: 1940 ttgatcaaatcactgaaatgctccaccagcagttcttccaca 1899
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>dbj|AK221995.1| Arabidopsis thaliana mRNA for ARE1-like protein, complete cds,
           clone: RAFL22-62-H02
          Length = 717

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                       
Query: 368 tccatcccacacaggaagttgctgaaggatgtgatgacgtccttgtgcatcagctcgatc 427
           ||||| ||||||| |||||| |||||||| || |||| ||| |||| ||||| ||| |||
Sbjct: 374 tccataccacacaagaagttactgaaggaagttatgatgtctttgtccatcaactcaatc 315

                                                    
Query: 428 gcggccttccatcggctcgcgaaatccttcaccagcggctc 468
           || | |||||||| |||  | || ||||||||||| |||||
Sbjct: 314 gctgtcttccatctgcttccaaagtccttcaccagtggctc 274



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 536 ttgatcaagtcactgaaatgctccataagcacttcctccaca 577
           |||||||| ||||||||||||||||  |||| ||| ||||||
Sbjct: 203 ttgatcaaatcactgaaatgctccaccagcagttcttccaca 162
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>gb|AF367286.1|AF367286 Arabidopsis thaliana At1g71270/F3I17_8 mRNA, complete cds
          Length = 2405

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                        
Query: 368  tccatcccacacaggaagttgctgaaggatgtgatgacgtccttgtgcatcagctcgatc 427
            ||||| ||||||| |||||| |||||||| || |||| ||| |||| ||||| ||| |||
Sbjct: 2111 tccataccacacaagaagttactgaaggaagttatgatgtctttgtccatcaactcaatc 2052

                                                     
Query: 428  gcggccttccatcggctcgcgaaatccttcaccagcggctc 468
            || | |||||||| |||  | || ||||||||||| |||||
Sbjct: 2051 gctgtcttccatctgcttccaaagtccttcaccagtggctc 2011



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 536  ttgatcaagtcactgaaatgctccataagcacttcctccaca 577
            |||||||| ||||||||||||||||  |||| ||| ||||||
Sbjct: 1940 ttgatcaaatcactgaaatgctccaccagcagttcttccaca 1899
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>tpg|BK000522.1| TPA: TPA_exp: Arabidopsis thaliana ARE1-like protein (POKY POLLEN
            TUBE) mRNA, complete cds
          Length = 2124

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 82/101 (81%)
 Strand = Plus / Minus

                                                                        
Query: 368  tccatcccacacaggaagttgctgaaggatgtgatgacgtccttgtgcatcagctcgatc 427
            ||||| ||||||| |||||| |||||||| || |||| ||| |||| ||||| ||| || 
Sbjct: 1970 tccataccacacaagaagttactgaaggaagttatgatgtctttgtccatcaactcaatt 1911

                                                     
Query: 428  gcggccttccatcggctcgcgaaatccttcaccagcggctc 468
            || | |||||||| |||  | || ||||||||||| |||||
Sbjct: 1910 gctgtcttccatctgcttccaaagtccttcaccagtggctc 1870



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 536  ttgatcaagtcactgaaatgctccataagcacttcctccaca 577
            |||||||| ||||||||||||||||  |||| ||| ||||||
Sbjct: 1799 ttgatcaaatcactgaaatgctccaccagcaattcttccaca 1758
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>gb|AY859551.1| Anoplodactylus portus 18S ribosomal RNA gene, partial sequence
          Length = 1809

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 101 aaaggggtgaaacccgacgggatgttc 127
           |||||||||||| ||||||||||||||
Sbjct: 726 aaaggggtgaaaaccgacgggatgttc 700
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>ref|NM_105799.1| Arabidopsis thaliana unknown protein AT1G71300 mRNA, complete cds
          Length = 2127

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 81/101 (80%)
 Strand = Plus / Minus

                                                                        
Query: 368  tccatcccacacaggaagttgctgaaggatgtgatgacgtccttgtgcatcagctcgatc 427
            ||||| ||||||| |||||| || ||| | || ||||  || ||||||||||  || |||
Sbjct: 1952 tccataccacacaagaagttactaaagcaagttatgatatctttgtgcatcaattctatc 1893

                                                     
Query: 428  gcggccttccatcggctcgcgaaatccttcaccagcggctc 468
            || | |||||||| |||  | || |||||||||||||||||
Sbjct: 1892 gctgtcttccatctgcttccaaagtccttcaccagcggctc 1852



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 525  ttttgacaaacttgatcaagtcactgaaatgctcca 560
            |||| ||||| |||||||  ||||||||||||||||
Sbjct: 1792 ttttaacaaatttgatcatatcactgaaatgctcca 1757
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>ref|NM_105800.2| Arabidopsis thaliana unknown protein AT1G71310 transcript variant
           AT1G71310.1 mRNA, complete cds
          Length = 1215

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 81/101 (80%)
 Strand = Plus / Plus

                                                                       
Query: 368 tccatcccacacaggaagttgctgaaggatgtgatgacgtccttgtgcatcagctcgatc 427
           ||||| ||||||| |||||| || ||| | || ||||  || ||||||||||  || |||
Sbjct: 795 tccataccacacaagaagttactaaagcaagttatgatatctttgtgcatcaattctatc 854

                                                    
Query: 428 gcggccttccatcggctcgcgaaatccttcaccagcggctc 468
           || | |||||||| |||  | || |||||||||||||||||
Sbjct: 855 gctgtcttccatctgcttccaaagtccttcaccagcggctc 895



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 525  ttttgacaaacttgatcaagtcactgaaatgctcca 560
            |||| ||||| |||||||  ||||||||||||||||
Sbjct: 1033 ttttaacaaatttgatcatatcactgaaatgctcca 1068
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>gb|BT012873.1| Lycopersicon esculentum clone 113972R, mRNA sequence
          Length = 2468

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 60/73 (82%)
 Strand = Plus / Minus

                                                                        
Query: 368  tccatcccacacaggaagttgctgaaggatgtgatgacgtccttgtgcatcagctcgatc 427
            ||||| ||||||||||| |||||||| || || || || || |||||||| ||||| || 
Sbjct: 2136 tccataccacacaggaaattgctgaaagaagtaatcacatcattgtgcataagctcaatg 2077

                         
Query: 428  gcggccttccatc 440
            || || |||||||
Sbjct: 2076 gcagctttccatc 2064
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>emb|AJ719341.1| Gallus gallus mRNA for hypothetical protein, clone 1i7
          Length = 3130

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 572 tccacatatattgcaatgttg 592
           |||||||||||||||||||||
Sbjct: 527 tccacatatattgcaatgttg 507
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>ref|NM_001008468.1| Gallus gallus transmembrane protein 34 (TMEM34), mRNA
          Length = 3130

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 572 tccacatatattgcaatgttg 592
           |||||||||||||||||||||
Sbjct: 527 tccacatatattgcaatgttg 507
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>gb|AC162927.3| Mus musculus BAC clone RP23-269E12 from chromosome 9, complete sequence
          Length = 213948

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 632   ccctcggtgccagcttccttc 652
             |||||||||||||||||||||
Sbjct: 84430 ccctcggtgccagcttccttc 84410
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>gb|AC010638.7|AC010638 Homo sapiens chromosome 5 clone CTD-2350J17, complete sequence
          Length = 129298

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 144    ggcatggatcagagtctccat 164
              |||||||||||||||||||||
Sbjct: 104576 ggcatggatcagagtctccat 104596
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>tpg|BK000523.1| TPA: TPA_exp: Arabidopsis thaliana ARE1-like protein P2 (P2) mRNA,
            complete cds
          Length = 2106

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 81/101 (80%)
 Strand = Plus / Minus

                                                                        
Query: 368  tccatcccacacaggaagttgctgaaggatgtgatgacgtccttgtgcatcagctcgatc 427
            ||||| ||||||| |||||| || ||| | || ||||  || ||||||||||  || |||
Sbjct: 1952 tccataccacacaagaagttactaaagcaagttatgatatctttgtgcatcaattctatc 1893

                                                     
Query: 428  gcggccttccatcggctcgcgaaatccttcaccagcggctc 468
            || | |||||||| |||  | || |||||||||||||||||
Sbjct: 1892 gctgtcttccatctgcttccaaagtccttcaccagcggctc 1852



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 525  ttttgacaaacttgatcaagtcactgaaatgctcca 560
            |||| ||||| |||||||  ||||||||||||||||
Sbjct: 1792 ttttaacaaatttgatcatatcactgaaatgctcca 1757
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>gb|AC016162.5|AC016162 Arabidopsis thaliana chromosome 1 BAC F3I17 genomic sequence, complete
             sequence
          Length = 107579

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 536   ttgatcaagtcactgaaatgctcca 560
             |||||||| ||||||||||||||||
Sbjct: 73455 ttgatcaaatcactgaaatgctcca 73479



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 81/101 (80%)
 Strand = Plus / Plus

                                                                         
Query: 368   tccatcccacacaggaagttgctgaaggatgtgatgacgtccttgtgcatcagctcgatc 427
             ||||| ||||||| |||||| || ||| | || ||||  || ||||||||||  || |||
Sbjct: 64699 tccataccacacaagaagttactaaagcaagttatgatatctttgtgcatcaattctatc 64758

                                                      
Query: 428   gcggccttccatcggctcgcgaaatccttcaccagcggctc 468
             || | |||||||| |||  | || |||||||||||||||||
Sbjct: 64759 gctgtcttccatctgcttccaaagtccttcaccagcggctc 64799



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 525   ttttgacaaacttgatcaagtcactgaaatgctcca 560
             |||| ||||| |||||||  ||||||||||||||||
Sbjct: 64937 ttttaacaaatttgatcatatcactgaaatgctcca 64972
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>gb|AC138118.4| Mus musculus BAC clone RP24-219A21 from 8, complete sequence
          Length = 168752

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 374    ccacacaggaagttgctgaaggatg 398
              |||||||||||||| ||||||||||
Sbjct: 133182 ccacacaggaagtttctgaaggatg 133158
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>emb|AL831710.8| Mouse DNA sequence from clone RP23-29K19 on chromosome 4, complete
             sequence
          Length = 191635

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 244   atacaggatggaggatatgga 264
             |||||||||||||||||||||
Sbjct: 18807 atacaggatggaggatatgga 18787
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>gb|AE008426.1| Streptococcus pneumoniae R6 section 42 of 184 of the complete genome
          Length = 14026

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 526  tttgacaaacttgatcaagtcactgaaa 553
            ||||||||||||| ||||||| ||||||
Sbjct: 4648 tttgacaaacttgctcaagtcgctgaaa 4621
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>gb|AC163679.3| Mus musculus BAC clone RP24-104E24 from chromosome 16, complete
             sequence
          Length = 193718

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 568   ttcctccacatatattgcaa 587
             ||||||||||||||||||||
Sbjct: 53546 ttcctccacatatattgcaa 53565
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>ref|XM_369165.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
            (MG00079.4) partial mRNA
          Length = 1569

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 473  tcgccgatgctggccttgtctgaa 496
            ||||||||||||||||| ||||||
Sbjct: 1345 tcgccgatgctggccttctctgaa 1368
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>gb|AC164293.2| Mus musculus BAC clone RP24-208N14 from chromosome 9, complete sequence
          Length = 166713

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    aacaaacacttggcagtaca 63
             ||||||||||||||||||||
Sbjct: 68568 aacaaacacttggcagtaca 68549
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>gb|AC138638.11| Mus musculus chromosome 8, clone RP23-380M21, complete sequence
          Length = 168821

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   gggatgttctttcttcaagt 138
             ||||||||||||||||||||
Sbjct: 36805 gggatgttctttcttcaagt 36824
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>gb|AC093866.3| Homo sapiens BAC clone RP11-582C12 from 4, complete sequence
          Length = 159764

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 565    cacttcctccacatatattg 584
              ||||||||||||||||||||
Sbjct: 126822 cacttcctccacatatattg 126803
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 415     catcagctcgatcgcggcct 434
               ||||||||||||||||||||
Sbjct: 1311049 catcagctcgatcgcggcct 1311068
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>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome
          Length = 2160842

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 526    tttgacaaacttgatcaagtcactgaaa 553
              ||||||||||||| ||||||| ||||||
Sbjct: 502234 tttgacaaacttgctcaagtcgctgaaa 502207
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>gb|AE005067.1| Halobacterium sp. NRC-1 section 98 of 170 of the complete genome
          Length = 9980

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 456  tcaccagcggctccacgtcg 475
            ||||||||||||||||||||
Sbjct: 7550 tcaccagcggctccacgtcg 7569
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>gb|AC154216.1| Mus musculus BAC clone RP24-354I21 from 13, complete sequence
          Length = 209934

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 474    cgccgatgctggccttgtct 493
              ||||||||||||||||||||
Sbjct: 108455 cgccgatgctggccttgtct 108436
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>gb|BC105840.1| Rattus norvegicus similar to hypothetical protein FLJ20397, mRNA
           (cDNA clone IMAGE:7453430), complete cds
          Length = 1816

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 338 agcagctgcgtgagagccgc 357
           ||||||||||||||||||||
Sbjct: 256 agcagctgcgtgagagccgc 275
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>gb|AC141438.4| Mus musculus BAC clone RP23-212C9 from 9, complete sequence
          Length = 195679

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    aacaaacacttggcagtaca 63
             ||||||||||||||||||||
Sbjct: 76686 aacaaacacttggcagtaca 76705
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>gb|AC102210.6| Mus musculus chromosome 8, clone RP24-351F4, complete sequence
          Length = 165443

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   gggatgttctttcttcaagt 138
             ||||||||||||||||||||
Sbjct: 42738 gggatgttctttcttcaagt 42719


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,262,854
Number of Sequences: 3902068
Number of extensions: 5262854
Number of successful extensions: 92725
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92523
Number of HSP's gapped (non-prelim): 200
length of query: 669
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 646
effective length of database: 17,143,297,704
effective search space: 11074570316784
effective search space used: 11074570316784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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