ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd25p13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB027572.1| Triticum aestivum chloroplast DNA, 21.1-kb fragm... 305 6e-80
2dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome 305 6e-80
3gb|M16840.1|WHTCPCA2 Wheat Asp-tRNA gene 212 7e-52
4emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome 141 2e-30
5gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast,... 141 2e-30
6gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome 141 2e-30
7dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete ... 141 2e-30
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
9dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
10emb|AL954772.23| Zebrafish DNA sequence from clone CH211-262E4, ... 48 0.022
11gb|AC007132.3| Homo sapiens BAC clone RP11-444A22 from 2, comple... 46 0.089
12gb|AC146523.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.35
13gb|AY694133.1| Pennisetum glaucum clone PGE123 photosystem II lo... 44 0.35
14gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar N... 44 0.35
15gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA... 44 0.35
16gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-1... 44 0.35
17emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chlor... 44 0.35
18emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4,... 44 0.35
19gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.35
20gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar N... 44 0.35
21dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
22dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
23dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
24gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.35
25gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.35
26dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome 44 0.35
27ref|XM_629597.1| Dictyostelium discoideum inositol 5-phosphatase... 42 1.4
28emb|Z97206.1|HS359N14 Human DNA sequence from clone RP3-359N14 o... 42 1.4
29emb|BX293556.14| Zebrafish DNA sequence from clone DKEY-21N20 in... 42 1.4
30gb|AC092691.3| Homo sapiens 3q BAC RP11-768G7 (Roswell Park Canc... 42 1.4
31gb|AC019212.4|AC019212 Homo sapiens BAC clone RP11-462H12 from X... 42 1.4
32gb|AC005539.1| Homo sapiens BAC clone RP11-335J18 from 2, comple... 42 1.4
33gb|AY184994.1| Dictyostelium discoideum inositol 5-phosphatase 3... 42 1.4
34gb|AC002449.1|AC002449 Human PAC clone RP3-404K21 from Xq23, com... 42 1.4
35gb|AC154516.2| Mus musculus BAC clone RP24-83D23 from chromosome... 40 5.5
36gb|AC159806.2| Echinops telfairi, clone Echinops telfairi -24240... 40 5.5
37ref|NM_007455.1| Mus musculus adaptor protein complex AP-1, gamm... 40 5.5
38gb|BC058402.1| Mus musculus adaptor protein complex AP-1, gamma ... 40 5.5
39emb|AL139341.9| Human DNA sequence from clone RP11-99N20 on chro... 40 5.5
40gb|AC175487.3| Mus musculus chromosome 7, clone wi1-1426N22, com... 40 5.5
41emb|AL161505.2|ATCHRIV17 Arabidopsis thaliana DNA chromosome 4, ... 40 5.5
42gb|AC126178.6| Homo sapiens 12 BAC RP11-567C2 (Roswell Park Canc... 40 5.5
43gb|AC107464.5| Homo sapiens BAC clone RP11-1191J2 from 4, comple... 40 5.5
44gb|AC093870.3| Homo sapiens BAC clone RP11-598G2 from 4, complet... 40 5.5
45dbj|AK147177.1| Mus musculus 16 days embryo kidney cDNA, RIKEN f... 40 5.5
46dbj|AK151844.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 5.5
47dbj|AK052384.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 5.5
48gb|AC093773.3| Homo sapiens BAC clone RP11-127A9 from 4, complet... 40 5.5
49gb|AC157212.2| Mus musculus BAC clone RP23-171A13 from chromosom... 40 5.5
50gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094... 40 5.5
51gb|AC073947.46| Mus musculus strain C57BL/6J chromosome 9 clone ... 40 5.5
52emb|BX548032.5| Zebrafish DNA sequence from clone CH211-145G9 in... 40 5.5
53gb|BC080798.1| Mus musculus adaptor protein complex AP-1, gamma ... 40 5.5
54emb|AL442638.3|HS570H19 Homo sapiens chromosome 9 BAC RP11-570H1... 40 5.5
55emb|AL954687.17| Zebrafish DNA sequence from clone CH211-202B2 i... 40 5.5
56gb|AF078820.2|AF078820 Nannospalax ehrenbergi high mobility grou... 40 5.5
57gb|AF147262.1|F28D6 Arabidopsis thaliana BAC F28D6 40 5.5
58emb|AJ511874.1|MMU511874 Mus musculus partial Muc2 gene for secr... 40 5.5
59gb|BC108374.1| Mus musculus adaptor protein complex AP-1, gamma ... 40 5.5
60gb|AF068707.1|AF068707 Mus musculus gamma2-adaptin (G2ad) mRNA, ... 40 5.5
61emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chro... 40 5.5
62emb|CT025680.8| Mouse DNA sequence from clone RP24-84H10 on chro... 40 5.5
63gb|AC006631.1| Caenorhabditis elegans cosmid F27B3, complete seq... 40 5.5 
>dbj|AB027572.1| Triticum aestivum chloroplast DNA, 21.1-kb fragment bearing RNA
            polymerase subunit (rpo) genes
          Length = 21245

 Score =  305 bits (154), Expect = 6e-80
 Identities = 167/172 (97%)
 Strand = Plus / Minus

                                                                        
Query: 17   tttttcttgtngttatacatacaattangtatgtattatatgagcaactttctatgggtc 76
            |||||||| | |||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 5202 tttttcttatagttatacatacaattatgtatgtattatatgaccaactttctatgggtc 5143

                                                                        
Query: 77   acatagacatccaaataagcagtagaagtgagatggggaaaagaggtctgaaataaaaag 136
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5142 acatagacatccaaataagcagtagaagtgagatggggaaaagaggtctgaaataaaaag 5083

                                                                
Query: 137  ggaatacaatttatgtatggattccggtaaaataccggtactctattccata 188
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5082 ggaatacgatttatgtatggattccggtaaaataccggtactctattccata 5031



 Score =  252 bits (127), Expect = 8e-64
 Identities = 169/185 (91%), Gaps = 4/185 (2%)
 Strand = Plus / Minus

                                                                        
Query: 227  ataaagaaagatagagtaatatccta----aaattctactaatccacatatcgtatgtgt 282
            ||||||||||||||||||||||  ||    ||||||||||||||||||||||||||||||
Sbjct: 5031 ataaagaaagatagagtaatataatatcctaaattctactaatccacatatcgtatgtgt 4972

                                                                        
Query: 283  gtctttctttatctttatcgatcgggagtagtgnnnnnnnttcctatactccttccctcc 342
            |||||||||||||||||||||||||||||||||       ||||||||| |||||||| |
Sbjct: 4971 gtctttctttatctttatcgatcgggagtagtgaaaaaaattcctatacgccttccctgc 4912

                                                                        
Query: 343  ctctttaatgagagatgcaaaataaaaaagtgaagtaagggtgccctatgggtatttgat 402
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4911 ctctttaatgagagatgcaaaataaaaaagtgaagtaagggtgccctgtgggtatttgat 4852

                 
Query: 403  cttgc 407
            |||||
Sbjct: 4851 cttgc 4847
to top
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score =  305 bits (154), Expect = 6e-80
 Identities = 167/172 (97%)
 Strand = Plus / Minus

                                                                         
Query: 17    tttttcttgtngttatacatacaattangtatgtattatatgagcaactttctatgggtc 76
             |||||||| | |||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 16556 tttttcttatagttatacatacaattatgtatgtattatatgaccaactttctatgggtc 16497

                                                                         
Query: 77    acatagacatccaaataagcagtagaagtgagatggggaaaagaggtctgaaataaaaag 136
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16496 acatagacatccaaataagcagtagaagtgagatggggaaaagaggtctgaaataaaaag 16437

                                                                 
Query: 137   ggaatacaatttatgtatggattccggtaaaataccggtactctattccata 188
             ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16436 ggaatacgatttatgtatggattccggtaaaataccggtactctattccata 16385



 Score =  252 bits (127), Expect = 8e-64
 Identities = 169/185 (91%), Gaps = 4/185 (2%)
 Strand = Plus / Minus

                                                                         
Query: 227   ataaagaaagatagagtaatatccta----aaattctactaatccacatatcgtatgtgt 282
             ||||||||||||||||||||||  ||    ||||||||||||||||||||||||||||||
Sbjct: 16385 ataaagaaagatagagtaatataatatcctaaattctactaatccacatatcgtatgtgt 16326

                                                                         
Query: 283   gtctttctttatctttatcgatcgggagtagtgnnnnnnnttcctatactccttccctcc 342
             |||||||||||||||||||||||||||||||||       ||||||||| |||||||| |
Sbjct: 16325 gtctttctttatctttatcgatcgggagtagtgaaaaaaattcctatacgccttccctgc 16266

                                                                         
Query: 343   ctctttaatgagagatgcaaaataaaaaagtgaagtaagggtgccctatgggtatttgat 402
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 16265 ctctttaatgagagatgcaaaataaaaaagtgaagtaagggtgccctgtgggtatttgat 16206

                  
Query: 403   cttgc 407
             |||||
Sbjct: 16205 cttgc 16201
to top
>gb|M16840.1|WHTCPCA2 Wheat Asp-tRNA gene
          Length = 559

 Score =  212 bits (107), Expect = 7e-52
 Identities = 168/186 (90%), Gaps = 7/186 (3%)
 Strand = Plus / Minus

                                                                       
Query: 227 ataaagaaagatagagtaatatccta----aaattctactaatccacatatcgtatgtgt 282
           ||||||||||||||||||||||  ||    ||||||||||||||||||||||||||||||
Sbjct: 550 ataaagaaagatagagtaatataatatcctaaattctactaatccacatatcgtatgtgt 491

                                                                       
Query: 283 gtctttctttatctttatcgatcgggagtagtgnnnnnnnttcctatactccttccctcc 342
           |||||||||||||||||||||||||||||||||       ||||||||| |||||||| |
Sbjct: 490 gtctttctttatctttatcgatcgggagtagtg-aaaaaattcctatacgccttccctgc 432

                                                                       
Query: 343 ctctttaatgagagatgcaaaataaaaaagtgaagt-aagggtgccctatgggtatttga 401
           |||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||
Sbjct: 431 ctctttaatgagagatgcaaaataaaaaagtgaagtcaagggtg-cctgtgggtatttga 373

                 
Query: 402 tcttgc 407
           ||||||
Sbjct: 372 tcttgc 367
to top
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  141 bits (71), Expect = 2e-30
 Identities = 84/89 (94%)
 Strand = Plus / Minus

                                                                         
Query: 17    tttttcttgtngttatacatacaattangtatgtattatatgagcaactttctatgggtc 76
             |||||||| | |||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 17851 tttttcttatagttatacatacaattatgtatgtattatatgaccaactttctatgggtc 17792

                                          
Query: 77    acatagacatccaaataagcagtagaagt 105
             |||||||||||| ||||||||||||||||
Sbjct: 17791 acatagacatcccaataagcagtagaagt 17763



 Score =  123 bits (62), Expect = 5e-25
 Identities = 80/86 (93%)
 Strand = Plus / Minus

                                                                         
Query: 146   tttatgtatggattccggtaaaataccggtactctattccataacagtggaataggaaat 205
             |||||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||| |
Sbjct: 17463 tttatgtatggattccggtaaaataccggtactcgatttcataagagtcgaataggaagt 17404

                                       
Query: 206   taagatgaggatggtatcatcataaa 231
             |||||||||| |||||||||||||||
Sbjct: 17403 taagatgagggtggtatcatcataaa 17378



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 57/64 (89%), Gaps = 1/64 (1%)
 Strand = Plus / Minus

                                                                         
Query: 346   tttaatgagagatgcaaaataa-aaaagtgaagtaagggtgccctatgggtatttgatct 404
             |||| ||||| |||||||| || ||||||||||||||||||||| || | ||||||||||
Sbjct: 17273 tttactgagaaatgcaaaaaaataaaagtgaagtaagggtgccccatagatatttgatct 17214

                 
Query: 405   tgcc 408
             ||||
Sbjct: 17213 tgcc 17210
to top
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score =  141 bits (71), Expect = 2e-30
 Identities = 84/89 (94%)
 Strand = Plus / Minus

                                                                         
Query: 17    tttttcttgtngttatacatacaattangtatgtattatatgagcaactttctatgggtc 76
             |||||||| | |||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 79976 tttttcttatagttatacatacaattatgtatgtattatatgaccaactttctatgggtc 79917

                                          
Query: 77    acatagacatccaaataagcagtagaagt 105
             |||||||||||| ||||||||||||||||
Sbjct: 79916 acatagacatcccaataagcagtagaagt 79888



 Score =  121 bits (61), Expect = 2e-24
 Identities = 129/150 (86%), Gaps = 5/150 (3%)
 Strand = Plus / Minus

                                                                         
Query: 146   tttatgtatggattccggtaaaataccggtactctattccataacagtggaataggaaat 205
             |||||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||| |
Sbjct: 79579 tttatgtatggattccggtaaaataccggtactcgatttcataagagtcgaataggaagt 79520

                                                                         
Query: 206   taagatgaggatggtatcatcataaagaaagatagagtaatatcctaaaattctactaat 265
             |||||||||| |||||| |||||    ||| |||||||| |||||| ||||| |||||||
Sbjct: 79519 taagatgagggtggtataatcat----aaaaatagagtagtatcct-aaattatactaat 79465

                                           
Query: 266   ccacatatcgtatgtgtgtctttctttatc 295
             |||| |||  ||||| || ||||| |||||
Sbjct: 79464 ccacgtatgatatgtatgcctttccttatc 79435



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 57/64 (89%), Gaps = 1/64 (1%)
 Strand = Plus / Minus

                                                                         
Query: 346   tttaatgagagatgcaaaataa-aaaagtgaagtaagggtgccctatgggtatttgatct 404
             |||| ||||| |||||||| || ||||||||||||||||||||| || | ||||||||||
Sbjct: 79390 tttactgagaaatgcaaaaaaagaaaagtgaagtaagggtgccccatagatatttgatct 79331

                 
Query: 405   tgcc 408
             ||||
Sbjct: 79330 tgcc 79327
to top
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score =  141 bits (71), Expect = 2e-30
 Identities = 84/89 (94%)
 Strand = Plus / Minus

                                                                         
Query: 17    tttttcttgtngttatacatacaattangtatgtattatatgagcaactttctatgggtc 76
             |||||||| | |||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 17843 tttttcttatagttatacatacaattatgtatgtattatatgaccaactttctatgggtc 17784

                                          
Query: 77    acatagacatccaaataagcagtagaagt 105
             |||||||||||| ||||||||||||||||
Sbjct: 17783 acatagacatcccaataagcagtagaagt 17755



 Score =  123 bits (62), Expect = 5e-25
 Identities = 80/86 (93%)
 Strand = Plus / Minus

                                                                         
Query: 146   tttatgtatggattccggtaaaataccggtactctattccataacagtggaataggaaat 205
             |||||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||| |
Sbjct: 17455 tttatgtatggattccggtaaaataccggtactcgatttcataagagtcgaataggaagt 17396

                                       
Query: 206   taagatgaggatggtatcatcataaa 231
             |||||||||| |||||||||||||||
Sbjct: 17395 taagatgagggtggtatcatcataaa 17370



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 57/64 (89%), Gaps = 1/64 (1%)
 Strand = Plus / Minus

                                                                         
Query: 346   tttaatgagagatgcaaaataa-aaaagtgaagtaagggtgccctatgggtatttgatct 404
             |||| ||||| |||||||| || ||||||||||||||||||||| || | ||||||||||
Sbjct: 17265 tttactgagaaatgcaaaaaaataaaagtgaagtaagggtgccccatagatatttgatct 17206

                 
Query: 405   tgcc 408
             ||||
Sbjct: 17205 tgcc 17202
to top
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score =  141 bits (71), Expect = 2e-30
 Identities = 84/89 (94%)
 Strand = Plus / Minus

                                                                         
Query: 17    tttttcttgtngttatacatacaattangtatgtattatatgagcaactttctatgggtc 76
             |||||||| | |||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 18349 tttttcttatagttatacatacaattatgtatgtattatatgaccaactttctatgggtc 18290

                                          
Query: 77    acatagacatccaaataagcagtagaagt 105
             |||||||||||| ||||||||||||||||
Sbjct: 18289 acatagacatcccaataagcagtagaagt 18261



 Score =  121 bits (61), Expect = 2e-24
 Identities = 129/150 (86%), Gaps = 5/150 (3%)
 Strand = Plus / Minus

                                                                         
Query: 146   tttatgtatggattccggtaaaataccggtactctattccataacagtggaataggaaat 205
             |||||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||| |
Sbjct: 17952 tttatgtatggattccggtaaaataccggtactcgatttcataagagtcgaataggaagt 17893

                                                                         
Query: 206   taagatgaggatggtatcatcataaagaaagatagagtaatatcctaaaattctactaat 265
             |||||||||| |||||| |||||    ||| |||||||| |||||| ||||| |||||||
Sbjct: 17892 taagatgagggtggtataatcat----aaaaatagagtagtatcct-aaattatactaat 17838

                                           
Query: 266   ccacatatcgtatgtgtgtctttctttatc 295
             |||| |||  ||||| || ||||| |||||
Sbjct: 17837 ccacgtatgatatgtatgcctttccttatc 17808



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 57/64 (89%), Gaps = 1/64 (1%)
 Strand = Plus / Minus

                                                                         
Query: 346   tttaatgagagatgcaaaataa-aaaagtgaagtaagggtgccctatgggtatttgatct 404
             |||| ||||| |||||||| || ||||||||||||||||||||| || | ||||||||||
Sbjct: 17763 tttactgagaaatgcaaaaaaagaaaagtgaagtaagggtgccccatagatatttgatct 17704

                 
Query: 405   tgcc 408
             ||||
Sbjct: 17703 tgcc 17700
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                          
Query: 366      aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 407
                ||||||||||| ||||||| ||| || |||||||||||||||
Sbjct: 14379908 aaaaaagtgaaataagggtaccccataggtatttgatcttgc 14379949
to top
>dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0022A24
          Length = 148347

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                        
Query: 366    aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 407
              ||||||||||| ||||||| ||| || |||||||||||||||
Sbjct: 101830 aaaaaagtgaaataagggtaccccataggtatttgatcttgc 101871
to top
>emb|AL954772.23| Zebrafish DNA sequence from clone CH211-262E4, complete sequence
          Length = 174414

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 263    aatccacatatcgtatgtgtgtctttct 290
              ||||||||| ||||||||||||||||||
Sbjct: 174331 aatccacatgtcgtatgtgtgtctttct 174304
to top
>gb|AC007132.3| Homo sapiens BAC clone RP11-444A22 from 2, complete sequence
          Length = 157779

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 31     atacatacaattangtatgtattata 56
              ||||||||||||| ||||||||||||
Sbjct: 128090 atacatacaattatgtatgtattata 128115
to top
>gb|AC146523.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0045D11
              map near 50283S, complete sequence
          Length = 148306

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                        
Query: 366    aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 407
              ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 103600 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 103641
to top
>gb|AY694133.1| Pennisetum glaucum clone PGE123 photosystem II low MW protein
           (psbM) gene, complete cds; chloroplast
          Length = 653

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 17  tttttcttgtngttatacatacaattangtatgtat 52
           |||||||| |  ||||||||||||||| ||||||||
Sbjct: 447 tttttcttataattatacatacaattatgtatgtat 482
to top
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
             complete genome
          Length = 134551

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 366   aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 407
             ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 16413 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 16372
to top
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
             complete genome
          Length = 134551

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 366   aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 407
             ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 16413 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 16372
to top
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast,
             complete genome
          Length = 134496

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 366   aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 407
             ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 16344 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 16303
to top
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 366   aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 407
             ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 16410 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 16369
to top
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08,
             complete sequence
          Length = 145980

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 366   aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 407
             ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 99763 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 99722
to top
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 366   aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 407
             ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 14632 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 14591
to top
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from
             chromosome 10, complete sequence
          Length = 134933

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 366   aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 407
             ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 89565 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 89524
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                         
Query: 366     aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 407
               ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 9245642 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 9245601



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                         
Query: 366     aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 407
               ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 9141737 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 9141696
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                          
Query: 366      aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 407
                ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 13970763 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 13970804
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 366      aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 407
                ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 10308240 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 10308199



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 86       tccaaataagcagtagaagt 105
                ||||||||||||||||||||
Sbjct: 17016496 tccaaataagcagtagaagt 17016515
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 366      aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 407
                ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 10314279 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 10314238



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 86       tccaaataagcagtagaagt 105
                ||||||||||||||||||||
Sbjct: 17025536 tccaaataagcagtagaagt 17025555
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                          
Query: 366      aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 407
                ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 14052765 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 14052806
to top
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 366   aaaaaagtgaagtaagggtgccctatgggtatttgatcttgc 407
             ||||||||||| || |||| ||| || |||||||||||||||
Sbjct: 16351 aaaaaagtgaaataggggtaccccataggtatttgatcttgc 16310
to top
>ref|XM_629597.1| Dictyostelium discoideum inositol 5-phosphatase (DDB0185180), partial
            mRNA
          Length = 4140

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 284  tctttctttatctttatcgat 304
            |||||||||||||||||||||
Sbjct: 2700 tctttctttatctttatcgat 2680
to top
>emb|Z97206.1|HS359N14 Human DNA sequence from clone RP3-359N14 on chromosome 6q16.3-21
             Contains a novel gene and a chromatin assembly factor 1
             p60 subunit (CHAF1B) pseudogene, complete sequence
          Length = 136299

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 356   gatgcaaaataaaaaagtgaa 376
             |||||||||||||||||||||
Sbjct: 26919 gatgcaaaataaaaaagtgaa 26939
to top
>emb|BX293556.14| Zebrafish DNA sequence from clone DKEY-21N20 in linkage group 11,
              complete sequence
          Length = 212880

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 128    aataaaaagggaatacaattt 148
              |||||||||||||||||||||
Sbjct: 104271 aataaaaagggaatacaattt 104251
to top
>gb|AC092691.3| Homo sapiens 3q BAC RP11-768G7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 170215

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 343   ctctttaatgagagatgcaaaataaaaaa 371
             ||||| |||||||||| ||||||||||||
Sbjct: 47293 ctcttgaatgagagattcaaaataaaaaa 47265
to top
>gb|AC019212.4|AC019212 Homo sapiens BAC clone RP11-462H12 from X, complete sequence
          Length = 213793

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 352    gagagatgcaaaataaaaaagtgaa 376
              |||||| ||||||||||||||||||
Sbjct: 170898 gagagaagcaaaataaaaaagtgaa 170922
to top
>gb|AC005539.1| Homo sapiens BAC clone RP11-335J18 from 2, complete sequence
          Length = 209613

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 280   tgtgtctttctttatctttatcgat 304
             ||||||||||| |||||||||||||
Sbjct: 41546 tgtgtctttctatatctttatcgat 41570
to top
>gb|AY184994.1| Dictyostelium discoideum inositol 5-phosphatase 3 gene, complete cds
          Length = 4325

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 284  tctttctttatctttatcgat 304
            |||||||||||||||||||||
Sbjct: 2885 tctttctttatctttatcgat 2865
to top
>gb|AC002449.1|AC002449 Human PAC clone RP3-404K21 from Xq23, complete sequence
          Length = 173767

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 83    acatccaaataagcagtagaa 103
             |||||||||||||||||||||
Sbjct: 14839 acatccaaataagcagtagaa 14819
to top
>gb|AC154516.2| Mus musculus BAC clone RP24-83D23 from chromosome 14, complete sequence
          Length = 216566

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 278    tgtgtgtctttctttatctt 297
              ||||||||||||||||||||
Sbjct: 167733 tgtgtgtctttctttatctt 167714
to top
>gb|AC159806.2| Echinops telfairi, clone Echinops telfairi -24240357J7, complete
             sequence
          Length = 38387

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   atacaatttatgtatggatt 159
             ||||||||||||||||||||
Sbjct: 25268 atacaatttatgtatggatt 25287
to top
>ref|NM_007455.1| Mus musculus adaptor protein complex AP-1, gamma 2 subunit (Ap1g2),
            mRNA
          Length = 2599

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 331  ctccttccctccctctttaa 350
            ||||||||||||||||||||
Sbjct: 1820 ctccttccctccctctttaa 1801
to top
>gb|BC058402.1| Mus musculus adaptor protein complex AP-1, gamma 2 subunit, mRNA
            (cDNA clone IMAGE:6817446), partial cds
          Length = 2720

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 331  ctccttccctccctctttaa 350
            ||||||||||||||||||||
Sbjct: 1865 ctccttccctccctctttaa 1846
to top
>emb|AL139341.9| Human DNA sequence from clone RP11-99N20 on chromosome 10 Contains the
             5' end of a novel gene, the gene for glutathione
             transferase omega 1 (GSTO1), the 5' end of a variant of
             the gene for a novel glutathione-S-transferase and two CpG
             islands, complete sequence
          Length = 104378

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    tccaaataagcagtagaagt 105
             ||||||||||||||||||||
Sbjct: 34653 tccaaataagcagtagaagt 34634
to top
>gb|AC175487.3| Mus musculus chromosome 7, clone wi1-1426N22, complete sequence
          Length = 41781

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 31   atacatacaattangtatgtattatat 57
            |||||| |||||| |||||||||||||
Sbjct: 5561 atacatccaattatgtatgtattatat 5587
to top
>emb|AL161505.2|ATCHRIV17 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 17
          Length = 198176

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 127    aaataaaaagggaatacaat 146
              ||||||||||||||||||||
Sbjct: 139541 aaataaaaagggaatacaat 139560
to top
>gb|AC126178.6| Homo sapiens 12 BAC RP11-567C2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 127439

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   tactccttccctccctcttt 348
             ||||||||||||||||||||
Sbjct: 55969 tactccttccctccctcttt 55988
to top
>gb|AC107464.5| Homo sapiens BAC clone RP11-1191J2 from 4, complete sequence
          Length = 219357

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   gaagtgagatggggaaaaga 120
             ||||||||||||||||||||
Sbjct: 14735 gaagtgagatggggaaaaga 14754
to top
>gb|AC093870.3| Homo sapiens BAC clone RP11-598G2 from 4, complete sequence
          Length = 193650

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   tgcaaaataaaaaagtgaag 377
             ||||||||||||||||||||
Sbjct: 21099 tgcaaaataaaaaagtgaag 21080
to top
>dbj|AK147177.1| Mus musculus 16 days embryo kidney cDNA, RIKEN full-length enriched
            library, clone:I920194L06 product:adaptor protein complex
            AP-1, gamma 2 subunit, full insert sequence
          Length = 2640

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 331  ctccttccctccctctttaa 350
            ||||||||||||||||||||
Sbjct: 1859 ctccttccctccctctttaa 1840
to top
>dbj|AK151844.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830040H14 product:adaptor protein complex
            AP-1, gamma 2 subunit, full insert sequence
          Length = 2505

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 331  ctccttccctccctctttaa 350
            ||||||||||||||||||||
Sbjct: 1851 ctccttccctccctctttaa 1832
to top
>dbj|AK052384.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:D330046K02 product:adaptor protein complex
            AP-1, gamma 2 subunit, full insert sequence
          Length = 3029

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 331  ctccttccctccctctttaa 350
            ||||||||||||||||||||
Sbjct: 1974 ctccttccctccctctttaa 1955
to top
>gb|AC093773.3| Homo sapiens BAC clone RP11-127A9 from 4, complete sequence
          Length = 167011

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 4      atttctncttccttttttcttgt 26
              |||||| ||||||||||||||||
Sbjct: 158844 atttctccttccttttttcttgt 158866
to top
>gb|AC157212.2| Mus musculus BAC clone RP23-171A13 from chromosome 14, complete sequence
          Length = 217099

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 331    ctccttccctccctctttaa 350
              ||||||||||||||||||||
Sbjct: 149173 ctccttccctccctctttaa 149192
to top
>gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094K03 genomic sequence, complete
             sequence
          Length = 135216

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    tccaaataagcagtagaagt 105
             ||||||||||||||||||||
Sbjct: 56988 tccaaataagcagtagaagt 57007
to top
>gb|AC073947.46| Mus musculus strain C57BL/6J chromosome 9 clone rp23-80d20, complete
              sequence
          Length = 247089

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 138    gaatacaatttatgtatgga 157
              ||||||||||||||||||||
Sbjct: 206498 gaatacaatttatgtatgga 206479
to top
>emb|BX548032.5| Zebrafish DNA sequence from clone CH211-145G9 in linkage group 17,
              complete sequence
          Length = 161483

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 222    tcatcataaagaaagatagagtaa 245
              ||||||||||||||| ||||||||
Sbjct: 129596 tcatcataaagaaagttagagtaa 129573
to top
>gb|BC080798.1| Mus musculus adaptor protein complex AP-1, gamma 2 subunit, mRNA
            (cDNA clone IMAGE:4953412), containing frame-shift errors
          Length = 2599

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 331  ctccttccctccctctttaa 350
            ||||||||||||||||||||
Sbjct: 1767 ctccttccctccctctttaa 1748
to top
>emb|AL442638.3|HS570H19 Homo sapiens chromosome 9 BAC RP11-570H19, complete sequence
          Length = 188247

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 254    aattctactaatccacatat 273
              ||||||||||||||||||||
Sbjct: 115323 aattctactaatccacatat 115304
to top
>emb|AL954687.17| Zebrafish DNA sequence from clone CH211-202B2 in linkage group 19,
             complete sequence
          Length = 191582

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 275   gtatgtgtgtctttctttat 294
             ||||||||||||||||||||
Sbjct: 32502 gtatgtgtgtctttctttat 32483
to top
>gb|AF078820.2|AF078820 Nannospalax ehrenbergi high mobility group protein (HMG1) gene,
            complete cds
          Length = 2193

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 196  aataggaaattaagatgagg 215
            ||||||||||||||||||||
Sbjct: 1173 aataggaaattaagatgagg 1154
to top
>gb|AF147262.1|F28D6 Arabidopsis thaliana BAC F28D6
          Length = 112629

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   aaataaaaagggaatacaat 146
             ||||||||||||||||||||
Sbjct: 76449 aaataaaaagggaatacaat 76468
to top
>emb|AJ511874.1|MMU511874 Mus musculus partial Muc2 gene for secreted gel-forming mucin,
           exons 39-47
          Length = 4200

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 31  atacatacaattangtatgtattatat 57
           |||||| |||||| |||||||||||||
Sbjct: 87  atacatccaattatgtatgtattatat 113
to top
>gb|BC108374.1| Mus musculus adaptor protein complex AP-1, gamma 2 subunit, mRNA
            (cDNA clone MGC:118107 IMAGE:4936738), complete cds
          Length = 2670

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 331  ctccttccctccctctttaa 350
            ||||||||||||||||||||
Sbjct: 1846 ctccttccctccctctttaa 1827
to top
>gb|AF068707.1|AF068707 Mus musculus gamma2-adaptin (G2ad) mRNA, complete cds
          Length = 2599

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 331  ctccttccctccctctttaa 350
            ||||||||||||||||||||
Sbjct: 1820 ctccttccctccctctttaa 1801
to top
>emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chromosome 14, complete
              sequence
          Length = 218673

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 278    tgtgtgtctttctttatctt 297
              ||||||||||||||||||||
Sbjct: 211524 tgtgtgtctttctttatctt 211543
to top
>emb|CT025680.8| Mouse DNA sequence from clone RP24-84H10 on chromosome 9, complete
              sequence
          Length = 243795

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 138    gaatacaatttatgtatgga 157
              ||||||||||||||||||||
Sbjct: 145000 gaatacaatttatgtatgga 144981
to top
>gb|AC006631.1| Caenorhabditis elegans cosmid F27B3, complete sequence
          Length = 30767

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 131  aaaaagggaatacaatttat 150
            ||||||||||||||||||||
Sbjct: 6106 aaaaagggaatacaatttat 6087


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,521,906
Number of Sequences: 3902068
Number of extensions: 5521906
Number of successful extensions: 135880
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 135440
Number of HSP's gapped (non-prelim): 432
length of query: 408
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 386
effective length of database: 17,147,199,772
effective search space: 6618819111992
effective search space used: 6618819111992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top