>M4K4_MOUSE (P97820) Mitogen-activated protein kinase kinase kinase kinase 4|
           (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 4) (MEK
           kinase kinase 4) (MEKKK 4) (HPK/GCK-like kinase HGK)
           (Nck-interacting kinase)
          Length = 1233

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
 Frame = -3

Query: 342 LLHVHRQREDAQRAGPPQYQ----------EPRPQDDRIH--REVKWILHRGYIASLLGN 199
           LLH HR+    Q+  PPQ Q          EP+P  D     REV+W     ++ASL  N
Sbjct: 492 LLHDHRRPHAQQQPPPPQQQDRSKPSFHAPEPKPHYDPADRAREVQW----SHLASLKNN 547

Query: 198 V 196
           V
Sbjct: 548 V 548

>PCD19_MOUSE (Q80TF3) Protocadherin-19 precursor|
          Length = 1145

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = +1

Query: 82  TDKIN*LNREFITSLVFLHLCSHRKL*LGCHKLSHTSMDVPKQRSNISTV*NPFHFSMN 258
           TDK+N ++   +TS +       + L LGC +   T ++V  Q +  +T  + +H S N
Sbjct: 796 TDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVENQNTRNTTASHIYHHSFN 854

>FBX5_HUMAN (Q9UKT4) F-box only protein 5 (Early mitotic inhibitor 1)|
          Length = 447

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +3

Query: 120 ISCLSSPLLSPKTLIRLPQAFTHIHGR-SQATKQYIHGVESISLLDESGHPED 275
           +SC+ SP++SP+ +++L      +H + +Q  +Q ++    I  L+ S   ED
Sbjct: 93  LSCIGSPIVSPR-IVQLETESKRLHNKENQHVQQTLNSTNEIEALETSRLYED 144

>POLG_HCVJF (Q99IB8) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3032

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
 Frame = +3

Query: 117 YISCLSSPLLSPKTLIRLPQAFTHIHGRSQAT----KQYIHGVE 236
           YI C S P L+PK L+  P    H       T    + Y+ GVE
Sbjct: 597 YIKCGSGPWLTPKCLVHYPYRLWHYPCTVNFTIFKIRMYVGGVE 640


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,631,493
Number of Sequences: 219361
Number of extensions: 961338
Number of successful extensions: 2842
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2842
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)