ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26e16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MFGM_PIG (P79385) Lactadherin (Milk fat globule-EGF factor 8) (M... 31 2.1
2MFGM_BOVIN (Q95114) Lactadherin precursor (Milk fat globule-EGF ... 30 6.0
3CBLB_HUMAN (Q13191) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.... 29 7.9
4FUR11_DROME (P26016) Furin-like protease 1, isoforms 1/1-X/2 pre... 29 7.9
5FUR1C_DROME (P30430) Furin-like protease 1, isoform 1-CRR precur... 29 7.9

>MFGM_PIG (P79385) Lactadherin (Milk fat globule-EGF factor 8) (MFG-E8)|
           (MFGM) (Sperm surface protein SP47) (PP47)
          Length = 409

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -3

Query: 530 KVTGEAXKHSQGEGHPVKLVPYNPNYQXESVLWTEXRDVGA 408
           +VTG   + ++  GH   +  Y   Y  + V WTE RD GA
Sbjct: 320 RVTGIITQGARDFGHIQYVAAYKVAYSDDGVSWTEYRDQGA 360



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>MFGM_BOVIN (Q95114) Lactadherin precursor (Milk fat globule-EGF factor 8)|
           (MFG-E8) (MGP57/53) (PAS-6/PAS-7 glycoprotein) (MFGM)
           (Sperm surface protein SP47) (BP47) (Components 15/16)
          Length = 427

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -3

Query: 530 KVTGEAXKHSQGEGHPVKLVPYNPNYQXESVLWTEXRDVGA 408
           +VTG   + ++  GH   +  Y   Y  + V WTE +D GA
Sbjct: 338 RVTGIITQGARDFGHIQYVAAYRVAYGDDGVTWTEYKDPGA 378



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>CBLB_HUMAN (Q13191) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal|
           transduction protein CBL-B) (SH3-binding protein CBL-B)
           (Casitas B-lineage lymphoma proto-oncogene b) (RING
           finger protein 56)
          Length = 982

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +1

Query: 289 SHHFHSTREVPSRTPPCSLSPW 354
           S H H    VPSR PP  L  W
Sbjct: 572 SRHIHHVESVPSRDPPMPLEAW 593



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>FUR11_DROME (P26016) Furin-like protease 1, isoforms 1/1-X/2 precursor (EC|
            3.4.21.75) (Furin-1) (Kex2-like endoprotease 1) (dKLIP-1)
          Length = 1269

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +2

Query: 128  DASPPPTAHDF--YSTDTATDHRLISTNSVXRWRSMQLQQHDTFTRGGSSSAGCL 286
            D + P  ++ F  Y  D A  H  +  +S  +WR+MQ       TR  S++A CL
Sbjct: 1173 DVANPSQSNQFNLYGNDMA--HNDVEYDSTGQWRNMQQVGEVGMTRDHSNTAACL 1225



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>FUR1C_DROME (P30430) Furin-like protease 1, isoform 1-CRR precursor (EC|
           3.4.21.75) (Furin-1) (Kex2-like endoprotease 1)
           (dKLIP-1)
          Length = 1101

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +2

Query: 128 DASPPPTAHDF--YSTDTATDHRLISTNSVXRWRSMQLQQHDTFTRGGSSSAGCL 286
           D + P  ++ F  Y  D A  H  +  +S  +WR+MQ       TR  S++A CL
Sbjct: 796 DVANPSQSNQFNLYGNDMA--HNDVEYDSTGQWRNMQQVGEVGMTRDHSNTAACL 848


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,761,054
Number of Sequences: 219361
Number of extensions: 1173813
Number of successful extensions: 2868
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2866
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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