>PSB3_ORYSA (Q9LST7) Proteasome subunit beta type 3 (EC 3.4.25.1) (20S|
           proteasome alpha subunit C) (20S proteasome subunit
           beta-3)
          Length = 204

 Score = 46.2 bits (108), Expect = 9e-05
 Identities = 21/30 (70%), Positives = 26/30 (86%)
 Frame = -1

Query: 528 SPRRLGV*LRTLSVDFERAFKIHDKLHIGL 439
           S RRLGV L+T++ DF+R FKIHDKL+IGL
Sbjct: 24  SDRRLGVQLQTVATDFQRVFKIHDKLYIGL 53

>PSB3_PICMA (O65084) Proteasome subunit beta type 3 (EC 3.4.25.1) (20S|
           proteasome alpha subunit C) (20S proteasome subunit
           beta-3)
          Length = 204

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 20/30 (66%), Positives = 26/30 (86%)
 Frame = -1

Query: 528 SPRRLGV*LRTLSVDFERAFKIHDKLHIGL 439
           S RRLGV L+T++ DF+R FKIHDKL++GL
Sbjct: 24  SDRRLGVQLQTIATDFQRIFKIHDKLYVGL 53

>PSB3B_ARATH (O81153) Proteasome subunit beta type 3-B (EC 3.4.25.1) (20S|
           proteasome beta subunit C-2)
          Length = 204

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 19/30 (63%), Positives = 23/30 (76%)
 Frame = -1

Query: 528 SPRRLGV*LRTLSVDFERAFKIHDKLHIGL 439
           S RRLGV L+T++ DF+R  KIHD L IGL
Sbjct: 24  SDRRLGVQLQTIATDFQRISKIHDHLFIGL 53

>PSB3A_ARATH (Q9XI05) Proteasome subunit beta type 3-A (EC 3.4.25.1) (20S|
           proteasome beta subunit C-1) (Proteasome component T)
          Length = 204

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 18/30 (60%), Positives = 24/30 (80%)
 Frame = -1

Query: 528 SPRRLGV*LRTLSVDFERAFKIHDKLHIGL 439
           S RRLGV L+T++ DF+R  KIHD++ IGL
Sbjct: 24  SDRRLGVQLQTIATDFQRISKIHDRVFIGL 53

>PQQF_PSEFL (P55174) Coenzyme PQQ synthesis protein F (EC 3.4.99.-)|
           (Pyrroloquinoline quinone biosynthesis protein F)
          Length = 829

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
 Frame = -2

Query: 620 TAPRLRSLLPHVQACSPRLRS*L---PHLKACSTRLAVSAYSY 501
           + PR  +L PH + C  RLR  L   PHLK C+  L V+A S+
Sbjct: 10  SCPRRITLCPHWRPCQ-RLRVSLRHAPHLKRCAATLRVAAGSH 51

>ARHG6_CHICK (Q5ZLR6) Rho guanine nucleotide exchange factor 6 (Rac/Cdc42|
           guanine nucleotide exchange factor 6)
          Length = 764

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +2

Query: 455 LSWILKALSKSTERVRSYTPRRRGEWSKPSDEEVKI 562
           +S+ILK  SKS + ++ + P+R+ E  K SDEE  I
Sbjct: 600 MSYILKDSSKSPKTMKKFLPKRKTE-RKASDEEFVI 634


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,871,105
Number of Sequences: 219361
Number of extensions: 1818223
Number of successful extensions: 5077
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5075
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6370891296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)