Clone Name | rbasd25p07 |
---|---|
Clone Library Name | barley_pub |
>DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 393 Score = 182 bits (462), Expect = 4e-46 Identities = 90/103 (87%), Positives = 94/103 (91%), Gaps = 2/103 (1%) Frame = -2 Query: 467 VTXFGXXGHAATWGKKLDAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVF 288 VT FG GHAATWGKKLDAEAYDCNN+VEQELPCGGVLIYQSF ANEE+AVSAGSPRSVF Sbjct: 293 VTIFGGRGHAATWGKKLDAEAYDCNNVVEQELPCGGVLIYQSFAANEELAVSAGSPRSVF 352 Query: 287 HCFEGENVESGHPLVKEGKLANLLAWRXEEDSLEE--GAVLCE 165 HCF ENVESGHPLVKEGKLANLLAWR EE+SLEE GA+LCE Sbjct: 353 HCF--ENVESGHPLVKEGKLANLLAWRAEEESLEEGTGALLCE 393
>DCAM_ORYSA (O24215) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 398 Score = 128 bits (322), Expect = 6e-30 Identities = 63/95 (66%), Positives = 74/95 (77%) Frame = -2 Query: 467 VTXFGXXGHAATWGKKLDAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVF 288 VT FG GHA TW K+L+A+AY CNN+VEQELPCGG+LIYQSF A E+V V+ GSP+SV Sbjct: 300 VTIFGGHGHAGTWAKELNADAYKCNNMVEQELPCGGLLIYQSFDATEDVPVAVGSPKSVL 359 Query: 287 HCFEGENVESGHPLVKEGKLANLLAWRXEEDSLEE 183 HCFE EN+ + P VKEGKL NLL W ED+LEE Sbjct: 360 HCFEAENMVNPAP-VKEGKLGNLLPW--GEDALEE 391
>DCAM_MAIZE (O24575) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 400 Score = 126 bits (316), Expect = 3e-29 Identities = 63/98 (64%), Positives = 73/98 (74%), Gaps = 1/98 (1%) Frame = -2 Query: 467 VTXFGXXGHAATWGKKLDAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVF 288 VT FG GHA TWGK L AE YDCNN+VEQELP GG+L+YQSF A E+ A SP+SVF Sbjct: 300 VTIFGGRGHAGTWGKALGAEVYDCNNMVEQELPGGGLLVYQSFCAAEDAV--ATSPKSVF 357 Query: 287 HCFEGENVESG-HPLVKEGKLANLLAWRXEEDSLEEGA 177 HCF+GENVES P+ K+ KLANLL W E D++EE A Sbjct: 358 HCFDGENVESAPPPMKKDYKLANLLCWEEEADAMEEKA 395
>DCAM_VICFA (Q9M4D8) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 353 Score = 35.8 bits (81), Expect = 0.057 Identities = 20/56 (35%), Positives = 27/56 (48%) Frame = -2 Query: 428 GKKLDAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGENVE 261 G LD + Y C+ Q L G ++YQ F A GSPRS C++ E+ E Sbjct: 301 GCLLDVKGYCCDEKSHQGLGMSGSVVYQKFVK----ASDCGSPRSTLKCWKDEDEE 352
>DCAM_IPOBA (Q9M6K1) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 362 Score = 33.9 bits (76), Expect = 0.22 Identities = 20/52 (38%), Positives = 25/52 (48%) Frame = -2 Query: 422 KLDAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGEN 267 KLD + Y C + L GG ++Y FT+ S GSPRS C EN Sbjct: 305 KLDVKGYACGERSYEGLNKGGSIMYCGFTSTG----SCGSPRSTLLCCWSEN 352
>DCAM_PEA (Q43820) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 353 Score = 33.5 bits (75), Expect = 0.28 Identities = 19/56 (33%), Positives = 25/56 (44%) Frame = -2 Query: 428 GKKLDAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGENVE 261 G LD + Y C Q L G ++YQ F GSPRS C++ E+ E Sbjct: 301 GCLLDVKGYCCEEKSHQGLGMSGSVVYQKFLKTS----YCGSPRSTLKCWKDEDEE 352
>DCAM_IPONI (Q96471) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 362 Score = 32.7 bits (73), Expect = 0.48 Identities = 19/52 (36%), Positives = 25/52 (48%) Frame = -2 Query: 422 KLDAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGEN 267 +LD + Y C + L GG ++Y FT+ S GSPRS C EN Sbjct: 305 ELDVKGYACGERSYEALGKGGSIMYCGFTSTG----SCGSPRSTLLCCWSEN 352
>PKN1_CHLCV (Q822R1) Serine/threonine-protein kinase pkn1 (EC 2.7.11.1)| Length = 618 Score = 29.6 bits (65), Expect = 4.1 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 4/39 (10%) Frame = -2 Query: 467 VTXFGXXGHAATWGKKLDAEA----YDCNNIVEQELPCG 363 VT +G G+A+ GK+L EA C + + PCG Sbjct: 473 VTWYGASGYASWVGKRLPTEAEWEIASCGGVTQLRYPCG 511
>CJ091_HUMAN (Q5T1B1) Protein C10orf91| Length = 145 Score = 29.3 bits (64), Expect = 5.3 Identities = 14/37 (37%), Positives = 17/37 (45%) Frame = -1 Query: 456 RXXRPRRHLGQEAXRRGIRLQQHRGAGAPLRGRPHLP 346 R P H GQ R + L+Q + AP GRP P Sbjct: 62 RSTSPISHQGQPQTTRALSLRQPQHPSAPASGRPRPP 98 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,890,969 Number of Sequences: 219361 Number of extensions: 945196 Number of successful extensions: 2805 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2752 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2801 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)