ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd25p07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Trit... 541 e-151
2gb|AF117660.1|AF117660 Triticum aestivum S-adenosylmethionine de... 529 e-147
3ref|XM_473046.1| Oryza sativa (japonica cultivar-group), predic... 70 7e-09
4emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 70 7e-09
5emb|Y07766.2|OSSADMEDC O.sativa mRNA for S-adenosylmethionine de... 70 7e-09
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
7gb|AY966487.1| Oryza sativa (indica cultivar-group) S-adenosylme... 70 7e-09
8gb|AF067194.1|AF067194 Oryza sativa S-adenosylmethionine decarbo... 70 7e-09
9dbj|AK100589.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
10dbj|AK098918.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
11dbj|AK072162.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
12dbj|AK067166.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
13dbj|AK062001.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
14emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4,... 70 7e-09
15emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 62 2e-06
16emb|AJ295156.1|PCO295156 Phragmites communis mRNA for d-TDP-gluc... 56 1e-04
17gb|BT018615.1| Zea mays clone EL01N0501D02.d mRNA sequence 50 0.007
18gb|BT016840.1| Zea mays clone Contig673 mRNA sequence 50 0.007
19emb|Y07767.1|ZMSADMEDC Z.mays mRNA for S-adenosylmethionine deca... 50 0.007
20gb|AY103590.1| Zea mays PCO098412 mRNA sequence 50 0.007
21ref|XM_960781.1| Encephalitozoon cuniculi GB-M1 hypothetical pro... 44 0.41
22emb|AL391737.2|CNS06C8G chromosome I of strain GB-M1 of Encephal... 44 0.41
23gb|AC125203.3| Mus musculus BAC clone RP23-233M21 from 19, compl... 42 1.6
24ref|XM_468482.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.4
25emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete ... 40 6.4
26dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
27gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 6.4
28dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
29emb|AJ698342.1| Megathura crenulata KLH2 gene for hemocyanin 2, ... 40 6.4 
>emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Tritordeum) mRNA for
            S-adenosylmethionine decarboxylase
          Length = 1893

 Score =  541 bits (273), Expect = e-151
 Identities = 422/469 (89%), Gaps = 20/469 (4%)
 Strand = Plus / Minus

                                                                        
Query: 10   gctcattgtggcagncgcagcaaaccacctnagngctaatagtttattcagnagtagcaa 69
            |||||||||||||| ||||||||||||||| || ||||||||||||||||| ||||||||
Sbjct: 1844 gctcattgtggcagacgcagcaaaccacct-agagctaatagtttattcag-agtagcaa 1787

                                                                        
Query: 70   tagcctggccggctgcttcacagtaaccaaaacgacaaacggaa---gtcagaacgaatt 126
            ||||||||||||||||||||||||||||||| ||||  |||  |   |||||||||||||
Sbjct: 1786 tagcctggccggctgcttcacagtaaccaaa-cgacgcacgacaacagtcagaacgaatt 1728

                                                                        
Query: 127  ccacagacggaacagcgacagcaaaaatcatcttatcactcgcacagcaccgcgcc---- 182
             ||||||||||||||||||||||||  |||||||||||||||||||||| ||||||    
Sbjct: 1727 acacagacggaacagcgacagcaaa--tcatcttatcactcgcacagcaacgcgcctgtg 1670

                                                                        
Query: 183  --ctcctccagagaatcctcctccgnccgccatgcgagcaggttggcaagcttgccttcc 240
              |||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1669 ccctcctcgagagactcctcctccgcccgccatgcgagcaggttggcaagcttgccttcc 1610

                                                                        
Query: 241  ttgaccagagggtggccgctctccacattctcgccctcgaagcagtggaagacggacctg 300
            |||||||||||||||||||||||||||||||||      |||||||||||||| ||||||
Sbjct: 1609 ttgaccagagggtggccgctctccacattctcg------aagcagtggaagacagacctg 1556

                                                                        
Query: 301  ggcgacccggcggagacagcaacctcttcattcgcggtaaagctctggtagatgaggacg 360
            ||||||||||| |||||||||| |||||| ||||||| ||||||||||||||||||||||
Sbjct: 1555 ggcgacccggcagagacagcaagctcttcgttcgcggcaaagctctggtagatgaggacg 1496

                                                                        
Query: 361  cccccgcaggggagctcctgctccacgatgttgttgcagtcgtatgcctcggcgtcnagc 420
            || ||||| || |||||||||||||| | ||||||||||||||||||||||||||| |||
Sbjct: 1495 ccaccgcatggcagctcctgctccacaacgttgttgcagtcgtatgcctcggcgtcgagc 1436

                                                             
Query: 421  ttcttgccccaggtggcggcgtggccgcngncaccgaanatggtgaccg 469
            |||||||||||||||||||| ||||| | | ||||||| ||||||||||
Sbjct: 1435 ttcttgccccaggtggcggcatggccacggccaccgaagatggtgaccg 1387
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>gb|AF117660.1|AF117660 Triticum aestivum S-adenosylmethionine decarboxylase precursor, mRNA,
            complete cds
          Length = 1386

 Score =  529 bits (267), Expect = e-147
 Identities = 391/427 (91%), Gaps = 9/427 (2%)
 Strand = Plus / Minus

                                                                        
Query: 44   gctaatagtttattcagnagtagcaatagcctggccggctgcttcacagtaaccaaaacg 103
            ||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||
Sbjct: 1368 gctaatagtttattcag-ag-agcaatagcctggccggctgcttcacagtaaccaaa-cg 1312

                                                                        
Query: 104  acaaacgga-agtcagaacgaattccacagacggaacagcgacagcaaaaatcatcttat 162
            |||||| || ||||||||| ||||||||||| |||| ||||||||||||  |||| |  |
Sbjct: 1311 acaaactgacagtcagaacaaattccacagatggaatagcgacagcaaa--tcatgtctt 1254

                                                                        
Query: 163  cactcgcacagcaccgcgccctcctccagagaatcctcctccgnccgccatgcgagcagg 222
            ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||
Sbjct: 1253 cactcgcacagcaccgcgccctcttccagagaatcctcctccgcccgccatgcgaggagg 1194

                                                                        
Query: 223  ttggcaagcttgccttccttgaccagagggtggccgctctccacattctcgccctcgaag 282
            ||||| |||||||||||||||||||||||||||| |   | |||| ||||| ||||||||
Sbjct: 1193 ttggcgagcttgccttccttgaccagagggtggctg---tgcacactctcggcctcgaag 1137

                                                                        
Query: 283  cagtggaagacggacctgggcgacccggcggagacagcaacctcttcattcgcggtaaag 342
            ||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||
Sbjct: 1136 cagtggaagacggacctgggcgacccggcagagacagcaacctcttcgttcacggtaaag 1077

                                                                        
Query: 343  ctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgcagtcg 402
            |||||||||||||||||||| || |||||||||||||||||||| | |||||||||||||
Sbjct: 1076 ctctggtagatgaggacgcctccacaggggagctcctgctccacaacgttgttgcagtcg 1017

                                                                        
Query: 403  tatgcctcggcgtcnagcttcttgccccaggtggcggcgtggccgcngncaccgaanatg 462
            |||||||||||||| ||||||||||||||||||||||||||||||| | |||| || |||
Sbjct: 1016 tatgcctcggcgtcgagcttcttgccccaggtggcggcgtggccgcggccaccaaagatg 957

                   
Query: 463  gtgaccg 469
            |||||||
Sbjct: 956  gtgaccg 950
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>ref|XM_473046.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1197

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 340  aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 398
            ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1025 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 967
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>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
             complete sequence
          Length = 173171

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                        
Query: 340   aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 398
             ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 13505 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 13447



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 68    aatagcctggccggctgcttcacag 92
             ||||||||||| |||||||||||||
Sbjct: 13782 aatagcctggctggctgcttcacag 13758
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>emb|Y07766.2|OSSADMEDC O.sativa mRNA for S-adenosylmethionine decarboxylase
          Length = 2036

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 340  aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 398
            ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1564 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 1506



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 68   aatagcctggccggctgcttcacag 92
            ||||||||||| |||||||||||||
Sbjct: 1841 aatagcctggctggctgcttcacag 1817
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                           
Query: 340      aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 398
                ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 24892920 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 24892862



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 68       aatagcctggccggctgcttcacag 92
                ||||||||||| |||||||||||||
Sbjct: 24893197 aatagcctggctggctgcttcacag 24893173
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>gb|AY966487.1| Oryza sativa (indica cultivar-group) S-adenosylmethionine
            decarboxylase mRNA, complete cds
          Length = 1197

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 340  aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 398
            ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1025 aagctctggtagatgaggaggccgccacagggcagctcctgctctaccatgttgttgca 967
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>gb|AF067194.1|AF067194 Oryza sativa S-adenosylmethionine decarboxylase mRNA, complete cds
          Length = 1560

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 340  aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 398
            ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1115 aagctctggtagatgaggaggccgccacagggcagctcctgctctaccatgttgttgca 1057



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 68   aatagcctggccggctgcttcacag 92
            ||||||||||| |||||||||||||
Sbjct: 1392 aatagcctggctggctgcttcacag 1368
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>dbj|AK100589.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106D22, full
            insert sequence
          Length = 2063

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 340  aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 398
            ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1608 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 1550



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 68   aatagcctggccggctgcttcacag 92
            ||||||||||| |||||||||||||
Sbjct: 1885 aatagcctggctggctgcttcacag 1861
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>dbj|AK098918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M21, full
            insert sequence
          Length = 2059

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 340  aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 398
            ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1608 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 1550



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 68   aatagcctggccggctgcttcacag 92
            ||||||||||| |||||||||||||
Sbjct: 1885 aatagcctggctggctgcttcacag 1861
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>dbj|AK072162.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129L10, full
            insert sequence
          Length = 2711

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 340  aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 398
            ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1608 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 1550



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 68   aatagcctggccggctgcttcacag 92
            ||||||||||| |||||||||||||
Sbjct: 1885 aatagcctggctggctgcttcacag 1861
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>dbj|AK067166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096P09, full
            insert sequence
          Length = 2063

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 340  aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 398
            ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1608 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 1550



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 68   aatagcctggccggctgcttcacag 92
            ||||||||||| |||||||||||||
Sbjct: 1885 aatagcctggctggctgcttcacag 1861
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>dbj|AK062001.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-D05, full
           insert sequence
          Length = 1217

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 340 aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 398
           ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 766 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 708



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 68   aatagcctggccggctgcttcacag 92
            ||||||||||| |||||||||||||
Sbjct: 1043 aatagcctggctggctgcttcacag 1019
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>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08,
              complete sequence
          Length = 170765

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                         
Query: 340    aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 398
              ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 154636 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 154578



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 68     aatagcctggccggctgcttcacag 92
              ||||||||||| |||||||||||||
Sbjct: 154913 aatagcctggctggctgcttcacag 154889
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>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 53/59 (89%), Gaps = 1/59 (1%)
 Strand = Plus / Minus

                                                                        
Query: 340   aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 398
             ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 13533 aagctctggtagatgagga-gccgccacagggcagctcctgctctaccatgttgttgca 13476



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 68    aatagcctggccggctgcttcacag 92
             ||||||||||| |||||||||||||
Sbjct: 13810 aatagcctggctggctgcttcacag 13786
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>emb|AJ295156.1|PCO295156 Phragmites communis mRNA for d-TDP-glucose dehydratase (tgp gene)
          Length = 1562

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/95 (83%), Gaps = 1/95 (1%)
 Strand = Plus / Minus

                                                                       
Query: 339 aaagctctggtagatgaggacgcccccgcaggggagctcctgctccacga-tgttgttgc 397
           |||||||||||| ||||| |  || |||||||| |||||||||||||| | |||||| ||
Sbjct: 111 aaagctctggtaaatgagaagaccaccgcagggcagctcctgctccacaactgttgtagc 52

                                              
Query: 398 agtcgtatgcctcggcgtcnagcttcttgccccag 432
           |||| ||  ||||||| || || ||||| ||||||
Sbjct: 51  agtcataaacctcggcatcaagtttcttcccccag 17
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>gb|BT018615.1| Zea mays clone EL01N0501D02.d mRNA sequence
          Length = 2057

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 373  agctcctgctccacgatgttgttgcagtc 401
            |||||||||||||| ||||||||||||||
Sbjct: 1538 agctcctgctccaccatgttgttgcagtc 1510



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 259  ctctccacattctcgccctcgaagcagtggaa 290
            |||||||| |||||||| || |||||||||||
Sbjct: 1646 ctctccacgttctcgccgtcaaagcagtggaa 1615
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>gb|BT016840.1| Zea mays clone Contig673 mRNA sequence
          Length = 1866

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 373 agctcctgctccacgatgttgttgcagtc 401
           |||||||||||||| ||||||||||||||
Sbjct: 540 agctcctgctccaccatgttgttgcagtc 568



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 259 ctctccacattctcgccctcgaagcagtggaa 290
           |||||||| |||||||| || |||||||||||
Sbjct: 432 ctctccacgttctcgccgtcaaagcagtggaa 463
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>emb|Y07767.1|ZMSADMEDC Z.mays mRNA for S-adenosylmethionine decarboxylase
          Length = 1873

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 373  agctcctgctccacgatgttgttgcagtc 401
            |||||||||||||| ||||||||||||||
Sbjct: 1358 agctcctgctccaccatgttgttgcagtc 1330



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 259  ctctccacattctcgccctcgaagcagtggaa 290
            |||||||| |||||||| || |||||||||||
Sbjct: 1466 ctctccacgttctcgccgtcaaagcagtggaa 1435
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>gb|AY103590.1| Zea mays PCO098412 mRNA sequence
          Length = 2400

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 373  agctcctgctccacgatgttgttgcagtc 401
            |||||||||||||| ||||||||||||||
Sbjct: 1607 agctcctgctccaccatgttgttgcagtc 1579



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 259  ctctccacattctcgccctcgaagcagtggaa 290
            |||||||| |||||||| || |||||||||||
Sbjct: 1715 ctctccacgttctcgccgtcaaagcagtggaa 1684
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>ref|XM_960781.1| Encephalitozoon cuniculi GB-M1 hypothetical protein (ECU01_0400)
           partial mRNA
          Length = 1224

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 382 tccacgatgttgttgcagtcgt 403
           ||||||||||||||||||||||
Sbjct: 88  tccacgatgttgttgcagtcgt 67
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>emb|AL391737.2|CNS06C8G chromosome I of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 209982

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 382   tccacgatgttgttgcagtcgt 403
             ||||||||||||||||||||||
Sbjct: 55310 tccacgatgttgttgcagtcgt 55331
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>gb|AC125203.3| Mus musculus BAC clone RP23-233M21 from 19, complete sequence
          Length = 191540

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 233   tgccttccttgaccagagggt 253
             |||||||||||||||||||||
Sbjct: 51033 tgccttccttgaccagagggt 51053
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>ref|XM_468482.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1497

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 373  agctcctgctccacgatgtt 392
            ||||||||||||||||||||
Sbjct: 1430 agctcctgctccacgatgtt 1411
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>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29
          Length = 292200

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 298    ctgggcgacccggcggagac 317
              ||||||||||||||||||||
Sbjct: 276909 ctgggcgacccggcggagac 276890
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 373      agctcctgctccacgatgtt 392
                ||||||||||||||||||||
Sbjct: 35459486 agctcctgctccacgatgtt 35459505
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 216    gagcaggttggcaagcttgc 235
              ||||||||||||||||||||
Sbjct: 494503 gagcaggttggcaagcttgc 494484
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>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1063_D06
          Length = 102439

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 373   agctcctgctccacgatgtt 392
             ||||||||||||||||||||
Sbjct: 71007 agctcctgctccacgatgtt 71026
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>emb|AJ698342.1| Megathura crenulata KLH2 gene for hemocyanin 2, exons 1-17
          Length = 24990

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    tgcttcacagtaaccaaaac 102
             ||||||||||||||||||||
Sbjct: 19045 tgcttcacagtaaccaaaac 19064


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,794,020
Number of Sequences: 3902068
Number of extensions: 2794020
Number of successful extensions: 73839
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73699
Number of HSP's gapped (non-prelim): 132
length of query: 471
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 449
effective length of database: 17,147,199,772
effective search space: 7699092697628
effective search space used: 7699092697628
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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