ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd25p04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY103782.1| Zea mays PCO080860 mRNA sequence 222 5e-55
2gb|BT016666.1| Zea mays clone Contig499 mRNA sequence 214 1e-52
3gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome... 210 2e-51
4dbj|AK061892.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 2e-51
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 210 2e-51
6dbj|AK065295.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 2e-51
7gb|BT009123.1| Triticum aestivum clone wl1n.pk0013.e12:fis, full... 170 2e-39
8gb|AY103707.1| Zea mays PCO072121 mRNA sequence 170 2e-39
9gb|BT016378.1| Zea mays clone Contig211 mRNA sequence 155 1e-34
10emb|Y17796.1|PSY17796 Pisum sativum mRNA for ketol-acid reductoi... 64 3e-07
11emb|AJ251333.1|PSA251333 Pisum sativum aair gene for acetohydrox... 64 3e-07
12gb|AC135231.23| Medicago truncatula clone mth2-28m10, complete s... 60 5e-06
13ref|NM_192395.1| Oryza sativa (japonica cultivar-group), predic... 58 2e-05
14dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
15dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
16dbj|AK072075.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
17gb|DQ448854.1| Theobroma cacao putative ketol acid reductoisomer... 42 1.1
18gb|AC136921.8| Mus musculus chromosome 17, clone RP23-210D4, com... 42 1.1
19gb|AC129095.12| Mus musculus strain C57BL/6J clone rp23-360g16 m... 42 1.1
20dbj|AK035823.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 42 1.1
21emb|BX119963.5| Zebrafish DNA sequence from clone DKEY-6A5 in li... 42 1.1
22gb|AC087901.20| Mus musculus strain C57BL/6J chromosome 17 clone... 42 1.1
23ref|XM_789042.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 4.2
24gb|AY007310.1| Coturnix coturnix target of Jun 3 (TOJ3) mRNA, co... 40 4.2
25gb|AC123917.25| Mus musculus chromosome 15, clone RP23-281P5, co... 40 4.2

>gb|AY103782.1| Zea mays PCO080860 mRNA sequence
          Length = 2117

 Score =  222 bits (112), Expect = 5e-55
 Identities = 175/196 (89%)
 Strand = Plus / Minus

                                                                        
Query: 126  aatctaggcagactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagat 185
            |||||||| |||||||||||||||||| ||||| ||||| || | ||| | ||| |||||
Sbjct: 1872 aatctaggaagactgccggagctccgggcgcacaaagtcggcgttggcaggcacagagat 1813

                                                                        
Query: 186  gtcgacggtgggcctcagctcggcgcatacctcgatggcgccgtggacggggtccgacat 245
            ||||||||||||||||||||||||||| ||||| ||||| || ||||| |||||||||| 
Sbjct: 1812 gtcgacggtgggcctcagctcggcgcagacctcaatggcaccatggacagggtccgacaa 1753

                                                                        
Query: 246  gaagttgctgatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctg 305
            ||||||||||||||||||||||||||| || || ||||||||||||| |||||| |||||
Sbjct: 1752 gaagttgctgatgaggtcctggttgatcggggcgtccttgtccaccgccacaaaggcctg 1693

                            
Query: 306  ctgggtcaggatgtag 321
            ||| ||||||||||||
Sbjct: 1692 ctgcgtcaggatgtag 1677



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>gb|BT016666.1| Zea mays clone Contig499 mRNA sequence
          Length = 1992

 Score =  214 bits (108), Expect = 1e-52
 Identities = 174/196 (88%)
 Strand = Plus / Minus

                                                                        
Query: 126  aatctaggcagactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagat 185
            |||||||| |||||||||||||||||| ||||| ||||| || | ||| | ||| |||||
Sbjct: 1780 aatctaggaagactgccggagctccgggcgcacaaagtcggcgttggcaggcacagagat 1721

                                                                        
Query: 186  gtcgacggtgggcctcagctcggcgcatacctcgatggcgccgtggacggggtccgacat 245
            ||||||||||||||||||||||||||| ||||| ||||| || ||||| |||||||||| 
Sbjct: 1720 gtcgacggtgggcctcagctcggcgcagacctcaatggcaccatggacagggtccgacaa 1661

                                                                        
Query: 246  gaagttgctgatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctg 305
            ||||||||||||||||||||||||||| || || ||||||||||||| ||| || |||||
Sbjct: 1660 gaagttgctgatgaggtcctggttgatcggggcgtccttgtccaccgccacgaaggcctg 1601

                            
Query: 306  ctgggtcaggatgtag 321
            ||| ||||||||||||
Sbjct: 1600 ctgcgtcaggatgtag 1585



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>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10,
              complete sequence
          Length = 187034

 Score =  210 bits (106), Expect = 2e-51
 Identities = 166/186 (89%)
 Strand = Plus / Plus

                                                                          
Query: 136    gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 195
              |||||||||||||| || |||||||| || || | ||| | ||| |||||||||||||||
Sbjct: 143341 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 143400

                                                                          
Query: 196    ggcctcagctcggcgcatacctcgatggcgccgtggacggggtccgacatgaagttgctg 255
              |||| |||||| ||||| |||||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 143401 ggccgcagctcagcgcacacctcgattgcgccatggacggggtcggacatgaagttgctg 143460

                                                                          
Query: 256    atgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcagg 315
              |||||||||||||||||||| |||||||||||||| ||||| || || ||||||||||||
Sbjct: 143461 atgaggtcctggttgatgggagcatccttgtccactgtcacgaatgcttgctgggtcagg 143520

                    
Query: 316    atgtag 321
              ||||||
Sbjct: 143521 atgtag 143526



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>dbj|AK061892.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-G05, full
           insert sequence
          Length = 1153

 Score =  210 bits (106), Expect = 2e-51
 Identities = 166/186 (89%)
 Strand = Plus / Minus

                                                                       
Query: 136 gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 195
           |||||||||||||| || |||||||| || || | ||| | ||| |||||||||||||||
Sbjct: 983 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 924

                                                                       
Query: 196 ggcctcagctcggcgcatacctcgatggcgccgtggacggggtccgacatgaagttgctg 255
           |||| |||||| ||||| |||||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 923 ggccgcagctcagcgcacacctcgattgcgccatggacggggtcggacatgaagttgctg 864

                                                                       
Query: 256 atgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcagg 315
           |||||||||||||||||||| |||||||||||||| ||||| || || ||||||||||||
Sbjct: 863 atgaggtcctggttgatgggagcatccttgtccactgtcacgaatgcttgctgggtcagg 804

                 
Query: 316 atgtag 321
           ||||||
Sbjct: 803 atgtag 798



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  210 bits (106), Expect = 2e-51
 Identities = 166/186 (89%)
 Strand = Plus / Plus

                                                                            
Query: 136      gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 195
                |||||||||||||| || |||||||| || || | ||| | ||| |||||||||||||||
Sbjct: 28359099 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 28359158

                                                                            
Query: 196      ggcctcagctcggcgcatacctcgatggcgccgtggacggggtccgacatgaagttgctg 255
                |||| |||||| ||||| |||||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 28359159 ggccgcagctcagcgcacacctcgattgcgccatggacggggtcggacatgaagttgctg 28359218

                                                                            
Query: 256      atgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcagg 315
                |||||||||||||||||||| |||||||||||||| ||||| || || ||||||||||||
Sbjct: 28359219 atgaggtcctggttgatgggagcatccttgtccactgtcacgaatgcttgctgggtcagg 28359278

                      
Query: 316      atgtag 321
                ||||||
Sbjct: 28359279 atgtag 28359284



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>dbj|AK065295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N13, full
            insert sequence
          Length = 1983

 Score =  210 bits (106), Expect = 2e-51
 Identities = 166/186 (89%)
 Strand = Plus / Minus

                                                                        
Query: 136  gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 195
            |||||||||||||| || |||||||| || || | ||| | ||| |||||||||||||||
Sbjct: 1795 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 1736

                                                                        
Query: 196  ggcctcagctcggcgcatacctcgatggcgccgtggacggggtccgacatgaagttgctg 255
            |||| |||||| ||||| |||||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 1735 ggccgcagctcagcgcacacctcgattgcgccatggacggggtcggacatgaagttgctg 1676

                                                                        
Query: 256  atgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcagg 315
            |||||||||||||||||||| |||||||||||||| ||||| || || ||||||||||||
Sbjct: 1675 atgaggtcctggttgatgggagcatccttgtccactgtcacgaatgcttgctgggtcagg 1616

                  
Query: 316  atgtag 321
            ||||||
Sbjct: 1615 atgtag 1610



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>gb|BT009123.1| Triticum aestivum clone wl1n.pk0013.e12:fis, full insert mRNA
            sequence
          Length = 1957

 Score =  170 bits (86), Expect = 2e-39
 Identities = 161/186 (86%)
 Strand = Plus / Minus

                                                                        
Query: 135  agactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggt 194
            |||||| || ||||| ||||||||||| |||||||| || ||||| |||||||| || ||
Sbjct: 1766 agactgtcgaagctctggacgcacgaaatcagcatcagcggtcactgagatgtcaacagt 1707

                                                                        
Query: 195  gggcctcagctcggcgcatacctcgatggcgccgtggacggggtccgacatgaagttgct 254
            |||||||||||  ||||| || |||||||| |||||||| ||||| ||||||||||||||
Sbjct: 1706 gggcctcagctgagcgcagacttcgatggcaccgtggacagggtcagacatgaagttgct 1647

                                                                        
Query: 255  gatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcag 314
            ||||||||| |||||||| || || | |||||| || |||||||||||||| ||||||| 
Sbjct: 1646 gatgaggtcttggttgatcggtgctttcttgtcaacagtcacaaacgcctgttgggtcaa 1587

                  
Query: 315  gatgta 320
            ||||||
Sbjct: 1586 gatgta 1581



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>gb|AY103707.1| Zea mays PCO072121 mRNA sequence
          Length = 1985

 Score =  170 bits (86), Expect = 2e-39
 Identities = 161/186 (86%)
 Strand = Plus / Minus

                                                                        
Query: 135  agactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggt 194
            |||||| || ||||| ||||||||||| |||||||| || ||||| |||||||| || ||
Sbjct: 1777 agactgtcgaagctctggacgcacgaaatcagcatcagcggtcactgagatgtcaacagt 1718

                                                                        
Query: 195  gggcctcagctcggcgcatacctcgatggcgccgtggacggggtccgacatgaagttgct 254
            |||||||||||  ||||| || |||||||| |||||||| ||||| ||||||||||||||
Sbjct: 1717 gggcctcagctgagcgcagacttcgatggcaccgtggacagggtcagacatgaagttgct 1658

                                                                        
Query: 255  gatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcag 314
            ||||||||| |||||||| || || | |||||| || |||||||||||||| ||||||| 
Sbjct: 1657 gatgaggtcttggttgatcggtgctttcttgtcaacagtcacaaacgcctgttgggtcaa 1598

                  
Query: 315  gatgta 320
            ||||||
Sbjct: 1597 gatgta 1592



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>gb|BT016378.1| Zea mays clone Contig211 mRNA sequence
          Length = 1029

 Score =  155 bits (78), Expect = 1e-34
 Identities = 159/186 (85%)
 Strand = Plus / Minus

                                                                       
Query: 135 agactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggt 194
           |||||| || ||||| || |||||||| |||||||  || ||||| |||||||| || ||
Sbjct: 817 agactgtcgaagctctgggcgcacgaaatcagcatgagcggtcactgagatgtcaacagt 758

                                                                       
Query: 195 gggcctcagctcggcgcatacctcgatggcgccgtggacggggtccgacatgaagttgct 254
           |||||||||||  ||||| || |||||||| |||||||| ||||| ||||||||||||||
Sbjct: 757 gggcctcagctgagcgcagacttcgatggcaccgtggacagggtcagacatgaagttgct 698

                                                                       
Query: 255 gatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcag 314
           ||||||||| |||||||| || || | |||||| || |||||||||||||| ||||||| 
Sbjct: 697 gatgaggtcttggttgatcggtgctttcttgtcaacagtcacaaacgcctgttgggtcaa 638

                 
Query: 315 gatgta 320
           ||||||
Sbjct: 637 gatgta 632



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>emb|Y17796.1|PSY17796 Pisum sativum mRNA for ketol-acid reductoisomerase
          Length = 2036

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                    
Query: 220  atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatggg 275
            ||||| ||||| || ||||| |||| |||||||||||| |||||||||||||||||
Sbjct: 1658 atggccccgtgcactgggtctgacacgaagttgctgatcaggtcctggttgatggg 1603



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>emb|AJ251333.1|PSA251333 Pisum sativum aair gene for acetohydroxy acid isomeroreductase, exons
            1-9
          Length = 3343

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                    
Query: 220  atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatggg 275
            ||||| ||||| || ||||| |||| |||||||||||| |||||||||||||||||
Sbjct: 3013 atggccccgtgcactgggtctgacacgaagttgctgatcaggtcctggttgatggg 2958



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>gb|AC135231.23| Medicago truncatula clone mth2-28m10, complete sequence
          Length = 106771

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 81/98 (82%)
 Strand = Plus / Plus

                                                                         
Query: 220   atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 279
             ||||| ||||| || ||||| ||||||||||||||||| | |||||||||||| || || 
Sbjct: 73387 atggctccgtgcactgggtctgacatgaagttgctgattaagtcctggttgataggagct 73446

                                                   
Query: 280   tccttgtccaccgtcacaaacgcctgctgggtcaggat 317
              | |||||||| | ||| || |||||||| || |||||
Sbjct: 73447 ccattgtccactgccaccaaagcctgctgagttaggat 73484



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>ref|NM_192395.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1746

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 140/177 (79%)
 Strand = Plus / Minus

                                                                        
Query: 145  agctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagc 204
            ||||| |||||||| ||||| ||||| || | ||| || ||||| ||||||||||||| |
Sbjct: 1730 agctctggacgcacaaagtctgcatcagcaggcactgaaatgtcaacggtgggcctcaac 1671

                                                                        
Query: 205  tcggcgcatacctcgatggcgccgtggacggggtccgacatgaagttgctgatgaggtcc 264
            |  || || || || ||||| |  |||||||| || || | ||| |||||||||||||| 
Sbjct: 1670 tgagcacagacttcaatggcactatggacgggatcggagaagaaattgctgatgaggtct 1611

                                                                     
Query: 265  tggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtag 321
            || || |  || |||| |||||| || |||||||| || || ||||||| |||||||
Sbjct: 1610 tgattaactggagcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtag 1554



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 140/177 (79%)
 Strand = Plus / Minus

                                                                            
Query: 145      agctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagc 204
                ||||| |||||||| ||||| ||||| || | ||| || ||||| ||||||||||||| |
Sbjct: 26389122 agctctggacgcacaaagtctgcatcagcaggcactgaaatgtcaacggtgggcctcaac 26389063

                                                                            
Query: 205      tcggcgcatacctcgatggcgccgtggacggggtccgacatgaagttgctgatgaggtcc 264
                |  || || || || ||||| |  |||||||| || || | ||| |||||||||||||| 
Sbjct: 26389062 tgagcacagacttcaatggcactatggacgggatcggagaagaaattgctgatgaggtct 26389003

                                                                         
Query: 265      tggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtag 321
                || || |  || |||| |||||| || |||||||| || || ||||||| |||||||
Sbjct: 26389002 tgattaactggagcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtag 26388946



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>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0032K15
          Length = 126195

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 140/177 (79%)
 Strand = Plus / Minus

                                                                         
Query: 145   agctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagc 204
             ||||| |||||||| ||||| ||||| || | ||| || ||||| ||||||||||||| |
Sbjct: 62987 agctctggacgcacaaagtctgcatcagcaggcactgaaatgtcaacggtgggcctcaac 62928

                                                                         
Query: 205   tcggcgcatacctcgatggcgccgtggacggggtccgacatgaagttgctgatgaggtcc 264
             |  || || || || ||||| |  |||||||| || || | ||| |||||||||||||| 
Sbjct: 62927 tgagcacagacttcaatggcactatggacgggatcggagaagaaattgctgatgaggtct 62868

                                                                      
Query: 265   tggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtag 321
             || || |  || |||| |||||| || |||||||| || || ||||||| |||||||
Sbjct: 62867 tgattaactggagcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtag 62811



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>dbj|AK072075.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013115K02, full
            insert sequence
          Length = 1917

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 140/177 (79%)
 Strand = Plus / Minus

                                                                        
Query: 145  agctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagc 204
            ||||| |||||||| ||||| ||||| || | ||| || ||||| ||||||||||||| |
Sbjct: 1681 agctctggacgcacaaagtctgcatcagcaggcactgaaatgtcaacggtgggcctcaac 1622

                                                                        
Query: 205  tcggcgcatacctcgatggcgccgtggacggggtccgacatgaagttgctgatgaggtcc 264
            |  || || || || ||||| |  |||||||| || || | ||| |||||||||||||| 
Sbjct: 1621 tgagcacagacttcaatggcactatggacgggatcggagaagaaattgctgatgaggtct 1562

                                                                     
Query: 265  tggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtag 321
            || || |  || |||| |||||| || |||||||| || || ||||||| |||||||
Sbjct: 1561 tgattaactggagcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtag 1505



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>gb|DQ448854.1| Theobroma cacao putative ketol acid reductoisomerase precursor-like
           protein, mRNA, partial sequence
          Length = 258

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 220 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatggg 275
           ||||| ||||| || ||||| |||| ||||||||||||  | || |||||||||||
Sbjct: 169 atggcaccgtgcaccgggtctgacaggaagttgctgatcngatcttggttgatggg 114



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>gb|AC136921.8| Mus musculus chromosome 17, clone RP23-210D4, complete sequence
          Length = 244237

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 246   gaagttgctgatgaggtcctg 266
             |||||||||||||||||||||
Sbjct: 46822 gaagttgctgatgaggtcctg 46842



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>gb|AC129095.12| Mus musculus strain C57BL/6J clone rp23-360g16 map 17, complete sequence
          Length = 209946

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 246    gaagttgctgatgaggtcctg 266
              |||||||||||||||||||||
Sbjct: 107699 gaagttgctgatgaggtcctg 107719



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>dbj|AK035823.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:9630008E23 product:mitogen
            activated protein kinase kinase kinase 4, full insert
            sequence
          Length = 3816

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 246  gaagttgctgatgaggtcctg 266
            |||||||||||||||||||||
Sbjct: 2783 gaagttgctgatgaggtcctg 2803



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>emb|BX119963.5| Zebrafish DNA sequence from clone DKEY-6A5 in linkage group 4, complete
              sequence
          Length = 229125

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 34     acacagcagctcacaggttcaaaca 58
              ||||||||||||||||||| |||||
Sbjct: 144182 acacagcagctcacaggtttaaaca 144158



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>gb|AC087901.20| Mus musculus strain C57BL/6J chromosome 17 clone rp23-22l23, complete
              sequence
          Length = 214372

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 246    gaagttgctgatgaggtcctg 266
              |||||||||||||||||||||
Sbjct: 151591 gaagttgctgatgaggtcctg 151611



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>ref|XM_789042.1| PREDICTED: Strongylocentrotus purpuratus similar to Forkhead box
           protein F1 (Forkhead-related protein FKHL5)
           (Forkhead-related transcription factor 1) (FREAC-1)
           (Forkhead-related activator-1) (LOC589400), mRNA
          Length = 1248

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 243 catgaagttgctgatgaggt 262
           ||||||||||||||||||||
Sbjct: 206 catgaagttgctgatgaggt 187



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>gb|AY007310.1| Coturnix coturnix target of Jun 3 (TOJ3) mRNA, complete cds
          Length = 1772

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 254  tgatgaggtcctggttgatg 273
            ||||||||||||||||||||
Sbjct: 1575 tgatgaggtcctggttgatg 1556



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>gb|AC123917.25| Mus musculus chromosome 15, clone RP23-281P5, complete sequence
          Length = 184959

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 34     acacagcagctcacaggttcaaac 57
              |||||||||| |||||||||||||
Sbjct: 108353 acacagcagcacacaggttcaaac 108376


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,047,098
Number of Sequences: 3902068
Number of extensions: 2047098
Number of successful extensions: 32462
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 32412
Number of HSP's gapped (non-prelim): 46
length of query: 321
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 299
effective length of database: 17,147,199,772
effective search space: 5127012731828
effective search space used: 5127012731828
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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