Clone Name
rbasd25p03
Clone Library Name
barley_pub
No.
Definition
Score (bits)
E Value
1 gb|AY103782.1| Zea mays PCO080860 mRNA sequence
474
e-130
2 gb|BT016666.1| Zea mays clone Contig499 mRNA sequence
466
e-128
3 dbj|AK061892.1| Oryza sativa (japonica cultivar-group) cDNA clon...
440
e-120
4 dbj|AK065295.1| Oryza sativa (japonica cultivar-group) cDNA clon...
440
e-120
5 gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome...
392
e-106
6 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...
392
e-106
7 gb|BT009123.1| Triticum aestivum clone wl1n.pk0013.e12:fis, full...
329
6e-87
8 gb|AY103707.1| Zea mays PCO072121 mRNA sequence
329
6e-87
9 gb|BT016378.1| Zea mays clone Contig211 mRNA sequence
297
2e-77
10 ref|NM_192395.1| Oryza sativa (japonica cultivar-group), predic...
242
1e-60
11 dbj|AK072075.1| Oryza sativa (japonica cultivar-group) cDNA clon...
242
1e-60
12 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
206
6e-50
13 dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic D...
206
6e-50
14 ref|NM_115723.2| Arabidopsis thaliana ketol-acid reductoisomeras...
147
5e-32
15 gb|BT000822.1| Arabidopsis thaliana ketol-acid reductoisomerase ...
147
5e-32
16 gb|BT000669.1| Arabidopsis thaliana clone RAFL07-09-M16 (R10765)...
147
5e-32
17 gb|AY096556.1| Arabidopsis thaliana putative ketol-acid reductoi...
147
5e-32
18 gb|AY065398.1| Arabidopsis thaliana putative ketol-acid reductoi...
147
5e-32
19 gb|AF329500.1| Arabidopsis thaliana putative ketol-acid reductoi...
147
5e-32
20 gb|AY062094.1| Arabidopsis thaliana AT3g58610/F14P22_200 mRNA, c...
147
5e-32
21 dbj|AK221938.1| Arabidopsis thaliana mRNA for ketol-acid reducto...
147
5e-32
22 gb|AF324671.2|AF324671 Arabidopsis thaliana AT3g58610 (AT3g58610...
147
5e-32
23 emb|X68150.1|ATKARE A.thaliana mRNA for ketol-acid reductoisomer...
145
2e-31
24 emb|BX823796.1|CNS0A4R1 Arabidopsis thaliana Full-length cDNA Co...
131
3e-27
25 emb|X69880.1|ATAAI A.thaliana gene for acetohydroxy acid isomero...
107
4e-20
26 emb|AL137082.1|ATF14P22 Arabidopsis thaliana DNA chromosome 3, B...
107
4e-20
27 emb|Y17796.1|PSY17796 Pisum sativum mRNA for ketol-acid reductoi...
103
6e-19
28 emb|X57073.1|SOAHRI S.oleracea AHRI mRNA for acetohydroxy acid r...
101
2e-18
29 gb|AY702346.1| Phytophthora infestans ketol-acid reductoisomeras...
101
2e-18
30 emb|AJ251333.1|PSA251333 Pisum sativum aair gene for acetohydrox...
88
4e-14
31 gb|AC135231.23| Medicago truncatula clone mth2-28m10, complete s...
68
3e-08
32 gb|DQ448854.1| Theobroma cacao putative ketol acid reductoisomer...
44
0.48
33 gb|AC136921.8| Mus musculus chromosome 17, clone RP23-210D4, com...
42
1.9
34 gb|AC129095.12| Mus musculus strain C57BL/6J clone rp23-360g16 m...
42
1.9
35 gb|AC027251.6| Homo sapiens chromosome 8, clone RP11-14G5, compl...
42
1.9
36 dbj|AK035823.1| Mus musculus 16 days neonate cerebellum cDNA, RI...
42
1.9
37 gb|AC153999.7| Mus musculus 6 BAC RP24-395E8 (Roswell Park Cance...
42
1.9
38 emb|BX119963.5| Zebrafish DNA sequence from clone DKEY-6A5 in li...
42
1.9
39 gb|AC087901.20| Mus musculus strain C57BL/6J chromosome 17 clone...
42
1.9
40 gb|AC154000.4| Mus musculus 6 BAC RP24-313C5 (Roswell Park Cance...
42
1.9
41 ref|XM_428106.1| PREDICTED: Gallus gallus similar to hypothetica...
40
7.6
42 ref|XM_789042.1| PREDICTED: Strongylocentrotus purpuratus simila...
40
7.6
43 gb|AC032011.15| Homo sapiens chromosome 15, clone RP11-435J9, co...
40
7.6
44 gb|AY007310.1| Coturnix coturnix target of Jun 3 (TOJ3) mRNA, co...
40
7.6
45 gb|AC091394.2|AC091394 Homo sapiens chromosome 5 clone CTD-2231K...
40
7.6
46 gb|AC138666.6| Mus musculus chromosome 5, clone RP24-140D11, com...
40
7.6
47 gb|AC123917.25| Mus musculus chromosome 15, clone RP23-281P5, co...
40
7.6
>gb| AY103782.1 | Zea mays PCO080860 mRNA sequence
Length = 2117
Score = 474 bits (239), Expect = e-130
Identities = 369/411 (89%), Gaps = 1/411 (0%)
Strand = Plus / Minus
Query: 136 aatctaggcagactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagat 195
|||||||| |||||||||||||||||| ||||| ||||| || | ||| | ||| |||||
Sbjct: 1872 aatctaggaagactgccggagctccgggcgcacaaagtcggcgttggcaggcacagagat 1813
Query: 196 gtcgacggtgggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacat 255
||||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||||
Sbjct: 1812 gtcgacggtgggcctcagctcggcgcagacctcaatggcaccatggacagggtccgacaa 1753
Query: 256 gaagttgctgatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctg 315
||||||||||||||||||||||||||| || || ||||||||||||| |||||| |||||
Sbjct: 1752 gaagttgctgatgaggtcctggttgatcggggcgtccttgtccaccgccacaaaggcctg 1693
Query: 316 ctgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggcccgtcg 375
||| |||||||||||||||||||| |||||||||||||| || ||||| || | |||| |
Sbjct: 1692 ctgcgtcaggatgtagtcgaagcgaggcgcccacttcctggatcccaggcgag-ccgttg 1634
Query: 376 tcgagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagt 435
| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 1633 tggagcagttgtccaccatgaaggcgaccccacgggcgtgcatgaacgggttcagcgagt 1574
Query: 436 ccactgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctca 495
|||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1573 ccaccgactcaatcacgctctcgttgatgatctcagagtaggagtgccccttcttcctca 1514
Query: 496 gcacctcgatctgggccatcataagtgcaacgtaaactccagccgtgaagg 546
| | ||| ||||| |||||||| || |||| ||| |||||||| |||||||
Sbjct: 1513 ggatctcaatctgagccatcatcagggcaatgtacactccagcagtgaagg 1463
>gb| BT016666.1 | Zea mays clone Contig499 mRNA sequence
Length = 1992
Score = 466 bits (235), Expect = e-128
Identities = 368/411 (89%), Gaps = 1/411 (0%)
Strand = Plus / Minus
Query: 136 aatctaggcagactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagat 195
|||||||| |||||||||||||||||| ||||| ||||| || | ||| | ||| |||||
Sbjct: 1780 aatctaggaagactgccggagctccgggcgcacaaagtcggcgttggcaggcacagagat 1721
Query: 196 gtcgacggtgggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacat 255
||||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||||
Sbjct: 1720 gtcgacggtgggcctcagctcggcgcagacctcaatggcaccatggacagggtccgacaa 1661
Query: 256 gaagttgctgatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctg 315
||||||||||||||||||||||||||| || || ||||||||||||| ||| || |||||
Sbjct: 1660 gaagttgctgatgaggtcctggttgatcggggcgtccttgtccaccgccacgaaggcctg 1601
Query: 316 ctgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggcccgtcg 375
||| |||||||||||||||||||| |||||||||||||| || ||||| || | |||| |
Sbjct: 1600 ctgcgtcaggatgtagtcgaagcgaggcgcccacttcctggatcccaggcgag-ccgttg 1542
Query: 376 tcgagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagt 435
| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 1541 tggagcagttgtccaccatgaaggcgaccccacgggcgtgcatgaacgggttcagcgagt 1482
Query: 436 ccactgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctca 495
|||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1481 ccaccgactcaatcacgctctcgttgatgatctcagagtaggagtgccccttcttcctca 1422
Query: 496 gcacctcgatctgggccatcataagtgcaacgtaaactccagccgtgaagg 546
| | ||| ||||| |||||||| || |||| ||| |||||||| |||||||
Sbjct: 1421 ggatctcaatctgagccatcatcagggcaatgtacactccagcagtgaagg 1371
>dbj| AK061892.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-041-G05, full
insert sequence
Length = 1153
Score = 440 bits (222), Expect = e-120
Identities = 358/402 (89%), Gaps = 1/402 (0%)
Strand = Plus / Minus
Query: 146 gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 205
|||||||||||||| || |||||||| || || | ||| | ||| |||||||||||||||
Sbjct: 983 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 924
Query: 206 ggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgctg 265
|||| |||||| ||||| |||||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 923 ggccgcagctcagcgcacacctcgattgcgccatggacggggtcggacatgaagttgctg 864
Query: 266 atgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcagg 325
|||||||||||||||||||| |||||||||||||| ||||| || || ||||||||||||
Sbjct: 863 atgaggtcctggttgatgggagcatccttgtccactgtcacgaatgcttgctgggtcagg 804
Query: 326 atgtagtcgaagcggggcgcccacttcctcgaccccagccgggcccgtcgtcgagcagtt 385
|||||||||||||| |||||||| ||||| || ||||| || | ||||||| ||||||||
Sbjct: 803 atgtagtcgaagcgtggcgcccatttccttgatcccagacgag-ccgtcgttgagcagtt 745
Query: 386 gtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactc 445
||| |||||||||||||| ||||| || |||||||| |||||||| |||||||| |||||
Sbjct: 744 gtcaaccatgaaggccactccacgagcatgcatgaaggggttcagtgagtccacggactc 685
Query: 446 gatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgat 505
||| |||||||||||||||||||| |||||||||||||||||||| || || ||||||||
Sbjct: 684 gatgacgctctcgttgatgatctctgagtaggagtgacccttctttctaaggacctcgat 625
Query: 506 ctgggccatcataagtgcaacgtaaactccagccgtgaaggg 547
||| |||||||| ||||||||||| |||||||| ||||||||
Sbjct: 624 ctgagccatcatcagtgcaacgtagactccagcagtgaaggg 583
>dbj| AK065295.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013002N13, full
insert sequence
Length = 1983
Score = 440 bits (222), Expect = e-120
Identities = 358/402 (89%), Gaps = 1/402 (0%)
Strand = Plus / Minus
Query: 146 gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 205
|||||||||||||| || |||||||| || || | ||| | ||| |||||||||||||||
Sbjct: 1795 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 1736
Query: 206 ggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgctg 265
|||| |||||| ||||| |||||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 1735 ggccgcagctcagcgcacacctcgattgcgccatggacggggtcggacatgaagttgctg 1676
Query: 266 atgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcagg 325
|||||||||||||||||||| |||||||||||||| ||||| || || ||||||||||||
Sbjct: 1675 atgaggtcctggttgatgggagcatccttgtccactgtcacgaatgcttgctgggtcagg 1616
Query: 326 atgtagtcgaagcggggcgcccacttcctcgaccccagccgggcccgtcgtcgagcagtt 385
|||||||||||||| |||||||| ||||| || ||||| || | ||||||| ||||||||
Sbjct: 1615 atgtagtcgaagcgtggcgcccatttccttgatcccagacgag-ccgtcgttgagcagtt 1557
Query: 386 gtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactc 445
||| |||||||||||||| ||||| || |||||||| |||||||| |||||||| |||||
Sbjct: 1556 gtcaaccatgaaggccactccacgagcatgcatgaaggggttcagtgagtccacggactc 1497
Query: 446 gatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgat 505
||| |||||||||||||||||||| |||||||||||||||||||| || || ||||||||
Sbjct: 1496 gatgacgctctcgttgatgatctctgagtaggagtgacccttctttctaaggacctcgat 1437
Query: 506 ctgggccatcataagtgcaacgtaaactccagccgtgaaggg 547
||| |||||||| ||||||||||| |||||||| ||||||||
Sbjct: 1436 ctgagccatcatcagtgcaacgtagactccagcagtgaaggg 1395
>gb| AC104284.2 | Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10,
complete sequence
Length = 187034
Score = 392 bits (198), Expect = e-106
Identities = 322/362 (88%), Gaps = 1/362 (0%)
Strand = Plus / Plus
Query: 146 gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 205
|||||||||||||| || |||||||| || || | ||| | ||| |||||||||||||||
Sbjct: 143341 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 143400
Query: 206 ggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgctg 265
|||| |||||| ||||| |||||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 143401 ggccgcagctcagcgcacacctcgattgcgccatggacggggtcggacatgaagttgctg 143460
Query: 266 atgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcagg 325
|||||||||||||||||||| |||||||||||||| ||||| || || ||||||||||||
Sbjct: 143461 atgaggtcctggttgatgggagcatccttgtccactgtcacgaatgcttgctgggtcagg 143520
Query: 326 atgtagtcgaagcggggcgcccacttcctcgaccccagccgggcccgtcgtcgagcagtt 385
|||||||||||||| |||||||| ||||| || ||||| || | ||||||| ||||||||
Sbjct: 143521 atgtagtcgaagcgtggcgcccatttccttgatcccagacgag-ccgtcgttgagcagtt 143579
Query: 386 gtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactc 445
||| |||||||||||||| ||||| || |||||||| |||||||| |||||||| |||||
Sbjct: 143580 gtcaaccatgaaggccactccacgagcatgcatgaaggggttcagtgagtccacggactc 143639
Query: 446 gatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgat 505
||| |||||||||||||||||||| |||||||||||||||||||| || || ||||||||
Sbjct: 143640 gatgacgctctcgttgatgatctctgagtaggagtgacccttctttctaaggacctcgat 143699
Query: 506 ct 507
||
Sbjct: 143700 ct 143701
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 510 gccatcataagtgcaacgtaaactccagccgtgaaggg 547
|||||||| ||||||||||| |||||||| ||||||||
Sbjct: 143820 gccatcatcagtgcaacgtagactccagcagtgaaggg 143857
>dbj| AP008211.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 392 bits (198), Expect = e-106
Identities = 322/362 (88%), Gaps = 1/362 (0%)
Strand = Plus / Plus
Query: 146 gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 205
|||||||||||||| || |||||||| || || | ||| | ||| |||||||||||||||
Sbjct: 28359099 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 28359158
Query: 206 ggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgctg 265
|||| |||||| ||||| |||||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 28359159 ggccgcagctcagcgcacacctcgattgcgccatggacggggtcggacatgaagttgctg 28359218
Query: 266 atgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcagg 325
|||||||||||||||||||| |||||||||||||| ||||| || || ||||||||||||
Sbjct: 28359219 atgaggtcctggttgatgggagcatccttgtccactgtcacgaatgcttgctgggtcagg 28359278
Query: 326 atgtagtcgaagcggggcgcccacttcctcgaccccagccgggcccgtcgtcgagcagtt 385
|||||||||||||| |||||||| ||||| || ||||| || | ||||||| ||||||||
Sbjct: 28359279 atgtagtcgaagcgtggcgcccatttccttgatcccagacgag-ccgtcgttgagcagtt 28359337
Query: 386 gtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactc 445
||| |||||||||||||| ||||| || |||||||| |||||||| |||||||| |||||
Sbjct: 28359338 gtcaaccatgaaggccactccacgagcatgcatgaaggggttcagtgagtccacggactc 28359397
Query: 446 gatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgat 505
||| |||||||||||||||||||| |||||||||||||||||||| || || ||||||||
Sbjct: 28359398 gatgacgctctcgttgatgatctctgagtaggagtgacccttctttctaaggacctcgat 28359457
Query: 506 ct 507
||
Sbjct: 28359458 ct 28359459
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 510 gccatcataagtgcaacgtaaactccagccgtgaaggg 547
|||||||| ||||||||||| |||||||| ||||||||
Sbjct: 28359578 gccatcatcagtgcaacgtagactccagcagtgaaggg 28359615
>gb| BT009123.1 | Triticum aestivum clone wl1n.pk0013.e12:fis, full insert mRNA
sequence
Length = 1957
Score = 329 bits (166), Expect = 6e-87
Identities = 353/414 (85%), Gaps = 1/414 (0%)
Strand = Plus / Minus
Query: 145 agactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggt 204
|||||| || ||||| ||||||||||| |||||||| || ||||| |||||||| || ||
Sbjct: 1766 agactgtcgaagctctggacgcacgaaatcagcatcagcggtcactgagatgtcaacagt 1707
Query: 205 gggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgct 264
||||||||||| |||||||| |||||||| |||||||| ||||| ||||||||||||||
Sbjct: 1706 gggcctcagctgagcgcagacttcgatggcaccgtggacagggtcagacatgaagttgct 1647
Query: 265 gatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcag 324
||||||||| |||||||| || || | |||||| || |||||||||||||| |||||||
Sbjct: 1646 gatgaggtcttggttgatcggtgctttcttgtcaacagtcacaaacgcctgttgggtcaa 1587
Query: 325 gatgtagtcgaagcggggcgcccacttcctcgaccccagccgggcccgtcgtcgagcagt 384
|||||| |||||||| || ||||||||||| || |||| || | | || || |||||||
Sbjct: 1586 gatgtaatcgaagcgtggtgcccacttcctagatcccaaacgag-cagttgtggagcagt 1528
Query: 385 tgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgact 444
| || |||||||||||||| || || || |||||||||||||||| ||||||||| ||||
Sbjct: 1527 tatcgaccatgaaggccacaccgcgagcatgcatgaacgggttcaacgagtccacggact 1468
Query: 445 cgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcga 504
|||||| |||||| || || ||||| ||||| ||||| ||||||||||| || ||||| |
Sbjct: 1467 cgatcaggctctcattaattatctctgagtaagagtggcccttcttcctaaggacctcaa 1408
Query: 505 tctgggccatcataagtgcaacgtaaactccagccgtgaaggggtggagtgggc 558
|||| |||||||| |||||||| || |||||||| |||||||| || |||||||
Sbjct: 1407 tctgagccatcattagtgcaacatacactccagcagtgaagggatgcagtgggc 1354
>gb| AY103707.1 | Zea mays PCO072121 mRNA sequence
Length = 1985
Score = 329 bits (166), Expect = 6e-87
Identities = 353/414 (85%), Gaps = 1/414 (0%)
Strand = Plus / Minus
Query: 145 agactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggt 204
|||||| || ||||| ||||||||||| |||||||| || ||||| |||||||| || ||
Sbjct: 1777 agactgtcgaagctctggacgcacgaaatcagcatcagcggtcactgagatgtcaacagt 1718
Query: 205 gggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgct 264
||||||||||| |||||||| |||||||| |||||||| ||||| ||||||||||||||
Sbjct: 1717 gggcctcagctgagcgcagacttcgatggcaccgtggacagggtcagacatgaagttgct 1658
Query: 265 gatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcag 324
||||||||| |||||||| || || | |||||| || |||||||||||||| |||||||
Sbjct: 1657 gatgaggtcttggttgatcggtgctttcttgtcaacagtcacaaacgcctgttgggtcaa 1598
Query: 325 gatgtagtcgaagcggggcgcccacttcctcgaccccagccgggcccgtcgtcgagcagt 384
|||||| |||||||| || ||||||||||| || |||| || | | || || |||||||
Sbjct: 1597 gatgtaatcgaagcgtggtgcccacttcctagatcccaaacgag-cagttgtggagcagt 1539
Query: 385 tgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgact 444
| || |||||||||||||| || || || |||||||||||||||| ||||||||| ||||
Sbjct: 1538 tatcgaccatgaaggccacaccgcgagcatgcatgaacgggttcaacgagtccacggact 1479
Query: 445 cgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcga 504
|||||| |||||| || || ||||| ||||| ||||| ||||||||||| || ||||| |
Sbjct: 1478 cgatcaggctctcattaattatctctgagtaagagtggcccttcttcctaaggacctcaa 1419
Query: 505 tctgggccatcataagtgcaacgtaaactccagccgtgaaggggtggagtgggc 558
|||| |||||||| |||||||| || |||||||| |||||||| || |||||||
Sbjct: 1418 tctgagccatcattagtgcaacatacactccagcagtgaagggatgcagtgggc 1365
>gb| BT016378.1 | Zea mays clone Contig211 mRNA sequence
Length = 1029
Score = 297 bits (150), Expect = 2e-77
Identities = 349/414 (84%), Gaps = 1/414 (0%)
Strand = Plus / Minus
Query: 145 agactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggt 204
|||||| || ||||| || |||||||| ||||||| || ||||| |||||||| || ||
Sbjct: 817 agactgtcgaagctctgggcgcacgaaatcagcatgagcggtcactgagatgtcaacagt 758
Query: 205 gggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgct 264
||||||||||| |||||||| |||||||| |||||||| ||||| ||||||||||||||
Sbjct: 757 gggcctcagctgagcgcagacttcgatggcaccgtggacagggtcagacatgaagttgct 698
Query: 265 gatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcag 324
||||||||| |||||||| || || | |||||| || |||||||||||||| |||||||
Sbjct: 697 gatgaggtcttggttgatcggtgctttcttgtcaacagtcacaaacgcctgttgggtcaa 638
Query: 325 gatgtagtcgaagcggggcgcccacttcctcgaccccagccgggcccgtcgtcgagcagt 384
|||||| |||||||| || ||||| ||||| || |||| || | | || || |||||||
Sbjct: 637 gatgtaatcgaagcgtggtgcccatttcctagatcccaaacgag-cagttgtggagcagt 579
Query: 385 tgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgact 444
| || |||||||||||||| || || || |||||||||||||||| ||||||||| ||||
Sbjct: 578 tatcgaccatgaaggccacaccgcgagcatgcatgaacgggttcaacgagtccacggact 519
Query: 445 cgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcga 504
|||||| | |||| || || ||||| ||||| ||||| ||||||||||| || ||||| |
Sbjct: 518 cgatcagggtctcattaattatctctgagtaagagtggcccttcttcctaaggacctcaa 459
Query: 505 tctgggccatcataagtgcaacgtaaactccagccgtgaaggggtggagtgggc 558
|||| |||||||| |||||||| || |||||||| |||||||| || |||||||
Sbjct: 458 tctgagccatcattagtgcaacatacactccagcagtgaagggatgcagtgggc 405
>ref| NM_192395.1 | Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1746
Score = 242 bits (122), Expect = 1e-60
Identities = 324/390 (83%), Gaps = 1/390 (0%)
Strand = Plus / Minus
Query: 155 agctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagc 214
||||| |||||||| ||||| ||||| || | ||| || ||||| ||||||||||||| |
Sbjct: 1730 agctctggacgcacaaagtctgcatcagcaggcactgaaatgtcaacggtgggcctcaac 1671
Query: 215 tcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgctgatgaggtcc 274
| || ||||| || ||||| | |||||||| || || | ||| ||||||||||||||
Sbjct: 1670 tgagcacagacttcaatggcactatggacgggatcggagaagaaattgctgatgaggtct 1611
Query: 275 tggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcg 334
|| || | || |||| |||||| || |||||||| || || ||||||| ||||||||||
Sbjct: 1610 tgattaactggagcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcg 1551
Query: 335 aagcggggcgcccacttcctcgaccccagccgggcccgtcgtcgagcagttgtccaccat 394
||||| |||||||| ||||| || |||| |||||| || || |||||||| || |||||
Sbjct: 1550 aagcgtggcgcccatttccttgatcccaaccgggct-gttgtggagcagttatcaaccat 1492
Query: 395 gaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcgatcacgct 454
||||||||||||||| ||||||||||| |||||||| || ||||| |||||||||| ||
Sbjct: 1491 gaaggccaccccacgagcgtgcatgaatgggttcagggaatccacagactcgatcaaact 1432
Query: 455 ctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgatctgggccat 514
||||||||||||||| ||||| ||||| |||||||| || || || || ||||| |||||
Sbjct: 1431 ctcgttgatgatctccgagtaagagtggcccttctttctaaggacttcaatctgtgccat 1372
Query: 515 cataagtgcaacgtaaactccagccgtgaa 544
|||||||||||| || |||||||| |||||
Sbjct: 1371 cataagtgcaacatacactccagcagtgaa 1342
>dbj| AK072075.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013115K02, full
insert sequence
Length = 1917
Score = 242 bits (122), Expect = 1e-60
Identities = 324/390 (83%), Gaps = 1/390 (0%)
Strand = Plus / Minus
Query: 155 agctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagc 214
||||| |||||||| ||||| ||||| || | ||| || ||||| ||||||||||||| |
Sbjct: 1681 agctctggacgcacaaagtctgcatcagcaggcactgaaatgtcaacggtgggcctcaac 1622
Query: 215 tcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgctgatgaggtcc 274
| || ||||| || ||||| | |||||||| || || | ||| ||||||||||||||
Sbjct: 1621 tgagcacagacttcaatggcactatggacgggatcggagaagaaattgctgatgaggtct 1562
Query: 275 tggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcg 334
|| || | || |||| |||||| || |||||||| || || ||||||| ||||||||||
Sbjct: 1561 tgattaactggagcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcg 1502
Query: 335 aagcggggcgcccacttcctcgaccccagccgggcccgtcgtcgagcagttgtccaccat 394
||||| |||||||| ||||| || |||| |||||| || || |||||||| || |||||
Sbjct: 1501 aagcgtggcgcccatttccttgatcccaaccgggct-gttgtggagcagttatcaaccat 1443
Query: 395 gaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcgatcacgct 454
||||||||||||||| ||||||||||| |||||||| || ||||| |||||||||| ||
Sbjct: 1442 gaaggccaccccacgagcgtgcatgaatgggttcagggaatccacagactcgatcaaact 1383
Query: 455 ctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgatctgggccat 514
||||||||||||||| ||||| ||||| |||||||| || || || || ||||| |||||
Sbjct: 1382 ctcgttgatgatctccgagtaagagtggcccttctttctaaggacttcaatctgtgccat 1323
Query: 515 cataagtgcaacgtaaactccagccgtgaa 544
|||||||||||| || |||||||| |||||
Sbjct: 1322 cataagtgcaacatacactccagcagtgaa 1293
>dbj| AP008207.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 206 bits (104), Expect = 6e-50
Identities = 279/336 (83%), Gaps = 1/336 (0%)
Strand = Plus / Minus
Query: 155 agctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagc 214
||||| |||||||| ||||| ||||| || | ||| || ||||| ||||||||||||| |
Sbjct: 26389122 agctctggacgcacaaagtctgcatcagcaggcactgaaatgtcaacggtgggcctcaac 26389063
Query: 215 tcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgctgatgaggtcc 274
| || ||||| || ||||| | |||||||| || || | ||| ||||||||||||||
Sbjct: 26389062 tgagcacagacttcaatggcactatggacgggatcggagaagaaattgctgatgaggtct 26389003
Query: 275 tggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcg 334
|| || | || |||| |||||| || |||||||| || || ||||||| ||||||||||
Sbjct: 26389002 tgattaactggagcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcg 26388943
Query: 335 aagcggggcgcccacttcctcgaccccagccgggcccgtcgtcgagcagttgtccaccat 394
||||| |||||||| ||||| || |||| |||||| || || |||||||| || |||||
Sbjct: 26388942 aagcgtggcgcccatttccttgatcccaaccgggct-gttgtggagcagttatcaaccat 26388884
Query: 395 gaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcgatcacgct 454
||||||||||||||| ||||||||||| |||||||| || ||||| |||||||||| ||
Sbjct: 26388883 gaaggccaccccacgagcgtgcatgaatgggttcagggaatccacagactcgatcaaact 26388824
Query: 455 ctcgttgatgatctcagagtaggagtgacccttctt 490
||||||||||||||| ||||| ||||| ||||||||
Sbjct: 26388823 ctcgttgatgatctccgagtaagagtggcccttctt 26388788
Score = 46.1 bits (23), Expect = 0.12
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 510 gccatcataagtgcaacgtaaactccagccgtgaa 544
||||||||||||||||| || |||||||| |||||
Sbjct: 26388671 gccatcataagtgcaacatacactccagcagtgaa 26388637
>dbj| AP003710.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OSJNBb0032K15
Length = 126195
Score = 206 bits (104), Expect = 6e-50
Identities = 279/336 (83%), Gaps = 1/336 (0%)
Strand = Plus / Minus
Query: 155 agctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagc 214
||||| |||||||| ||||| ||||| || | ||| || ||||| ||||||||||||| |
Sbjct: 62987 agctctggacgcacaaagtctgcatcagcaggcactgaaatgtcaacggtgggcctcaac 62928
Query: 215 tcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgctgatgaggtcc 274
| || ||||| || ||||| | |||||||| || || | ||| ||||||||||||||
Sbjct: 62927 tgagcacagacttcaatggcactatggacgggatcggagaagaaattgctgatgaggtct 62868
Query: 275 tggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcg 334
|| || | || |||| |||||| || |||||||| || || ||||||| ||||||||||
Sbjct: 62867 tgattaactggagcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcg 62808
Query: 335 aagcggggcgcccacttcctcgaccccagccgggcccgtcgtcgagcagttgtccaccat 394
||||| |||||||| ||||| || |||| |||||| || || |||||||| || |||||
Sbjct: 62807 aagcgtggcgcccatttccttgatcccaaccgggct-gttgtggagcagttatcaaccat 62749
Query: 395 gaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcgatcacgct 454
||||||||||||||| ||||||||||| |||||||| || ||||| |||||||||| ||
Sbjct: 62748 gaaggccaccccacgagcgtgcatgaatgggttcagggaatccacagactcgatcaaact 62689
Query: 455 ctcgttgatgatctcagagtaggagtgacccttctt 490
||||||||||||||| ||||| ||||| ||||||||
Sbjct: 62688 ctcgttgatgatctccgagtaagagtggcccttctt 62653
Score = 46.1 bits (23), Expect = 0.12
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 510 gccatcataagtgcaacgtaaactccagccgtgaa 544
||||||||||||||||| || |||||||| |||||
Sbjct: 62536 gccatcataagtgcaacatacactccagcagtgaa 62502
>ref| NM_115723.2 | Arabidopsis thaliana ketol-acid reductoisomerase AT3G58610 mRNA,
complete cds
Length = 2087
Score = 147 bits (74), Expect = 5e-32
Identities = 303/378 (80%), Gaps = 1/378 (0%)
Strand = Plus / Minus
Query: 170 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 229
||||| ||||| || | ||| ||||| || ||||| ||||| |||| |||||||||||
Sbjct: 1851 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1792
Query: 230 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 289
||||| || ||||| || || || | |||||| ||||| ||||| |||||| | |||
Sbjct: 1791 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1732
Query: 290 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 349
| ||||||| | ||||| || || ||||||||||||||||| || || ||||||||
Sbjct: 1731 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1672
Query: 350 ttcctcgaccccagccgggcccgtcgtcgagcagttgtccaccatgaaggccaccccacg 409
|||||||| |||| | || || || ||||||||||| |||||||||| ||| || |
Sbjct: 1671 ttcctcgaacccaatcttgct-gtggttgagcagttgtcaaccatgaaggacactcccct 1613
Query: 410 cgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctc 469
|||||||| || ||||| || |||||||| || || ||||| |||||||||||||| ||
Sbjct: 1612 ggcgtgcataaatgggtttagagagtccacggattcaatcacactctcgttgatgatttc 1553
Query: 470 agagtaggagtgacccttcttcctcagcacctcgatctgggccatcataagtgcaacgta 529
||||| |||||||| |||||||||| | ||| ||||| |||||||||||||| || ||
Sbjct: 1552 tgagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacata 1493
Query: 530 aactccagccgtgaaggg 547
||||||||| ||||||||
Sbjct: 1492 aactccagcggtgaaggg 1475
>gb| BT000822.1 | Arabidopsis thaliana ketol-acid reductoisomerase
(At3g58610/F14P22_200) mRNA, complete cds
Length = 1776
Score = 147 bits (74), Expect = 5e-32
Identities = 303/378 (80%), Gaps = 1/378 (0%)
Strand = Plus / Minus
Query: 170 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 229
||||| ||||| || | ||| ||||| || ||||| ||||| |||| |||||||||||
Sbjct: 1742 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1683
Query: 230 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 289
||||| || ||||| || || || | |||||| ||||| ||||| |||||| | |||
Sbjct: 1682 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1623
Query: 290 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 349
| ||||||| | ||||| || || ||||||||||||||||| || || ||||||||
Sbjct: 1622 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1563
Query: 350 ttcctcgaccccagccgggcccgtcgtcgagcagttgtccaccatgaaggccaccccacg 409
|||||||| |||| | || || || ||||||||||| |||||||||| ||| || |
Sbjct: 1562 ttcctcgaacccaatcttgct-gtggttgagcagttgtcaaccatgaaggacactcccct 1504
Query: 410 cgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctc 469
|||||||| || ||||| || |||||||| || || ||||| |||||||||||||| ||
Sbjct: 1503 ggcgtgcataaatgggtttagagagtccacggattcaatcacactctcgttgatgatttc 1444
Query: 470 agagtaggagtgacccttcttcctcagcacctcgatctgggccatcataagtgcaacgta 529
||||| |||||||| |||||||||| | ||| ||||| |||||||||||||| || ||
Sbjct: 1443 tgagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacata 1384
Query: 530 aactccagccgtgaaggg 547
||||||||| ||||||||
Sbjct: 1383 aactccagcggtgaaggg 1366
>gb| BT000669.1 | Arabidopsis thaliana clone RAFL07-09-M16 (R10765) putative ketol-acid
reductoisomerase (At3g58610) mRNA, complete cds
Length = 2028
Score = 147 bits (74), Expect = 5e-32
Identities = 303/378 (80%), Gaps = 1/378 (0%)
Strand = Plus / Minus
Query: 170 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 229
||||| ||||| || | ||| ||||| || ||||| ||||| |||| |||||||||||
Sbjct: 1792 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1733
Query: 230 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 289
||||| || ||||| || || || | |||||| ||||| ||||| |||||| | |||
Sbjct: 1732 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1673
Query: 290 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 349
| ||||||| | ||||| || || ||||||||||||||||| || || ||||||||
Sbjct: 1672 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1613
Query: 350 ttcctcgaccccagccgggcccgtcgtcgagcagttgtccaccatgaaggccaccccacg 409
|||||||| |||| | || || || ||||||||||| |||||||||| ||| || |
Sbjct: 1612 ttcctcgaacccaatcttgct-gtggttgagcagttgtcaaccatgaaggacactcccct 1554
Query: 410 cgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctc 469
|||||||| || ||||| || |||||||| || || ||||| |||||||||||||| ||
Sbjct: 1553 ggcgtgcataaatgggtttagagagtccacggattcaatcacactctcgttgatgatttc 1494
Query: 470 agagtaggagtgacccttcttcctcagcacctcgatctgggccatcataagtgcaacgta 529
||||| |||||||| |||||||||| | ||| ||||| |||||||||||||| || ||
Sbjct: 1493 tgagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacata 1434
Query: 530 aactccagccgtgaaggg 547
||||||||| ||||||||
Sbjct: 1433 aactccagcggtgaaggg 1416
>gb| AY096556.1 | Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610)
mRNA, complete cds
Length = 1807
Score = 147 bits (74), Expect = 5e-32
Identities = 303/378 (80%), Gaps = 1/378 (0%)
Strand = Plus / Minus
Query: 170 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 229
||||| ||||| || | ||| ||||| || ||||| ||||| |||| |||||||||||
Sbjct: 1742 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1683
Query: 230 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 289
||||| || ||||| || || || | |||||| ||||| ||||| |||||| | |||
Sbjct: 1682 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1623
Query: 290 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 349
| ||||||| | ||||| || || ||||||||||||||||| || || ||||||||
Sbjct: 1622 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1563
Query: 350 ttcctcgaccccagccgggcccgtcgtcgagcagttgtccaccatgaaggccaccccacg 409
|||||||| |||| | || || || ||||||||||| |||||||||| ||| || |
Sbjct: 1562 ttcctcgaacccaatcttgct-gtggttgagcagttgtcaaccatgaaggacactcccct 1504
Query: 410 cgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctc 469
|||||||| || ||||| || |||||||| || || ||||| |||||||||||||| ||
Sbjct: 1503 ggcgtgcataaatgggtttagagagtccacggattcaatcacactctcgttgatgatttc 1444
Query: 470 agagtaggagtgacccttcttcctcagcacctcgatctgggccatcataagtgcaacgta 529
||||| |||||||| |||||||||| | ||| ||||| |||||||||||||| || ||
Sbjct: 1443 tgagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacata 1384
Query: 530 aactccagccgtgaaggg 547
||||||||| ||||||||
Sbjct: 1383 aactccagcggtgaaggg 1366
>gb| AY065398.1 | Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610)
mRNA, complete cds
Length = 2058
Score = 147 bits (74), Expect = 5e-32
Identities = 303/378 (80%), Gaps = 1/378 (0%)
Strand = Plus / Minus
Query: 170 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 229
||||| ||||| || | ||| ||||| || ||||| ||||| |||| |||||||||||
Sbjct: 1851 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1792
Query: 230 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 289
||||| || ||||| || || || | |||||| ||||| ||||| |||||| | |||
Sbjct: 1791 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1732
Query: 290 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 349
| ||||||| | ||||| || || ||||||||||||||||| || || ||||||||
Sbjct: 1731 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1672
Query: 350 ttcctcgaccccagccgggcccgtcgtcgagcagttgtccaccatgaaggccaccccacg 409
|||||||| |||| | || || || ||||||||||| |||||||||| ||| || |
Sbjct: 1671 ttcctcgaacccaatcttgct-gtggttgagcagttgtcaaccatgaaggacactcccct 1613
Query: 410 cgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctc 469
|||||||| || ||||| || |||||||| || || ||||| |||||||||||||| ||
Sbjct: 1612 ggcgtgcataaatgggtttagagagtccacggattcaatcacactctcgttgatgatttc 1553
Query: 470 agagtaggagtgacccttcttcctcagcacctcgatctgggccatcataagtgcaacgta 529
||||| |||||||| |||||||||| | ||| ||||| |||||||||||||| || ||
Sbjct: 1552 tgagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacata 1493
Query: 530 aactccagccgtgaaggg 547
||||||||| ||||||||
Sbjct: 1492 aactccagcggtgaaggg 1475
>gb| AF329500.1 | Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610)
mRNA, complete cds
Length = 1996
Score = 147 bits (74), Expect = 5e-32
Identities = 303/378 (80%), Gaps = 1/378 (0%)
Strand = Plus / Minus
Query: 170 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 229
||||| ||||| || | ||| ||||| || ||||| ||||| |||| |||||||||||
Sbjct: 1788 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1729
Query: 230 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 289
||||| || ||||| || || || | |||||| ||||| ||||| |||||| | |||
Sbjct: 1728 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1669
Query: 290 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 349
| ||||||| | ||||| || || ||||||||||||||||| || || ||||||||
Sbjct: 1668 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1609
Query: 350 ttcctcgaccccagccgggcccgtcgtcgagcagttgtccaccatgaaggccaccccacg 409
|||||||| |||| | || || || ||||||||||| |||||||||| ||| || |
Sbjct: 1608 ttcctcgaacccaatcttgct-gtggttgagcagttgtcaaccatgaaggacactcccct 1550
Query: 410 cgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctc 469
|||||||| || ||||| || |||||||| || || ||||| |||||||||||||| ||
Sbjct: 1549 ggcgtgcataaatgggtttagagagtccacggattcaatcacactctcgttgatgatttc 1490
Query: 470 agagtaggagtgacccttcttcctcagcacctcgatctgggccatcataagtgcaacgta 529
||||| |||||||| |||||||||| | ||| ||||| |||||||||||||| || ||
Sbjct: 1489 tgagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacata 1430
Query: 530 aactccagccgtgaaggg 547
||||||||| ||||||||
Sbjct: 1429 aactccagcggtgaaggg 1412
>gb| AY062094.1 | Arabidopsis thaliana AT3g58610/F14P22_200 mRNA, complete cds
Length = 1990
Score = 147 bits (74), Expect = 5e-32
Identities = 303/378 (80%), Gaps = 1/378 (0%)
Strand = Plus / Minus
Query: 170 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 229
||||| ||||| || | ||| ||||| || ||||| ||||| |||| |||||||||||
Sbjct: 1786 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1727
Query: 230 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 289
||||| || ||||| || || || | |||||| ||||| ||||| |||||| | |||
Sbjct: 1726 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1667
Query: 290 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 349
| ||||||| | ||||| || || ||||||||||||||||| || || ||||||||
Sbjct: 1666 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1607
Query: 350 ttcctcgaccccagccgggcccgtcgtcgagcagttgtccaccatgaaggccaccccacg 409
|||||||| |||| | || || || ||||||||||| |||||||||| ||| || |
Sbjct: 1606 ttcctcgaacccaatcttgct-gtggttgagcagttgtcaaccatgaaggacactcccct 1548
Query: 410 cgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctc 469
|||||||| || ||||| || |||||||| || || ||||| |||||||||||||| ||
Sbjct: 1547 ggcgtgcataaatgggtttagagagtccacggattcaatcacactctcgttgatgatttc 1488
Query: 470 agagtaggagtgacccttcttcctcagcacctcgatctgggccatcataagtgcaacgta 529
||||| |||||||| |||||||||| | ||| ||||| |||||||||||||| || ||
Sbjct: 1487 tgagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacata 1428
Query: 530 aactccagccgtgaaggg 547
||||||||| ||||||||
Sbjct: 1427 aactccagcggtgaaggg 1410
>dbj| AK221938.1 | Arabidopsis thaliana mRNA for ketol-acid reductoisomerase, complete
cds, clone: RAFL22-45-C07
Length = 1266
Score = 147 bits (74), Expect = 5e-32
Identities = 303/378 (80%), Gaps = 1/378 (0%)
Strand = Plus / Minus
Query: 170 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 229
||||| ||||| || | ||| ||||| || ||||| ||||| |||| |||||||||||
Sbjct: 1064 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1005
Query: 230 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 289
||||| || ||||| || || || | |||||| ||||| ||||| |||||| | |||
Sbjct: 1004 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 945
Query: 290 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 349
| ||||||| | ||||| || || ||||||||||||||||| || || ||||||||
Sbjct: 944 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 885
Query: 350 ttcctcgaccccagccgggcccgtcgtcgagcagttgtccaccatgaaggccaccccacg 409
|||||||| |||| | || || || ||||||||||| |||||||||| ||| || |
Sbjct: 884 ttcctcgaacccaatcttgct-gtggttgagcagttgtcaaccatgaaggacactcccct 826
Query: 410 cgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctc 469
|||||||| || ||||| || |||||||| || || ||||| |||||||||||||| ||
Sbjct: 825 ggcgtgcataaatgggtttagagagtccacggattcaatcacactctcgttgatgatttc 766
Query: 470 agagtaggagtgacccttcttcctcagcacctcgatctgggccatcataagtgcaacgta 529
||||| |||||||| |||||||||| | ||| ||||| |||||||||||||| || ||
Sbjct: 765 tgagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacata 706
Query: 530 aactccagccgtgaaggg 547
||||||||| ||||||||
Sbjct: 705 aactccagcggtgaaggg 688
>gb| AF324671.2 |AF324671 Arabidopsis thaliana AT3g58610 (AT3g58610/F14P22_200) mRNA, complete
cds
Length = 1980
Score = 147 bits (74), Expect = 5e-32
Identities = 303/378 (80%), Gaps = 1/378 (0%)
Strand = Plus / Minus
Query: 170 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 229
||||| ||||| || | ||| ||||| || ||||| ||||| |||| |||||||||||
Sbjct: 1788 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1729
Query: 230 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 289
||||| || ||||| || || || | |||||| ||||| ||||| |||||| | |||
Sbjct: 1728 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1669
Query: 290 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 349
| ||||||| | ||||| || || ||||||||||||||||| || || ||||||||
Sbjct: 1668 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1609
Query: 350 ttcctcgaccccagccgggcccgtcgtcgagcagttgtccaccatgaaggccaccccacg 409
|||||||| |||| | || || || ||||||||||| |||||||||| ||| || |
Sbjct: 1608 ttcctcgaacccaatcttgct-gtggttgagcagttgtcaaccatgaaggacactcccct 1550
Query: 410 cgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctc 469
|||||||| || ||||| || |||||||| || || ||||| |||||||||||||| ||
Sbjct: 1549 ggcgtgcataaatgggtttagagagtccacggattcaatcacactctcgttgatgatttc 1490
Query: 470 agagtaggagtgacccttcttcctcagcacctcgatctgggccatcataagtgcaacgta 529
||||| |||||||| |||||||||| | ||| ||||| |||||||||||||| || ||
Sbjct: 1489 tgagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacata 1430
Query: 530 aactccagccgtgaaggg 547
||||||||| ||||||||
Sbjct: 1429 aactccagcggtgaaggg 1412
>emb| X68150.1 |ATKARE A.thaliana mRNA for ketol-acid reductoisomerase subunit
Length = 1966
Score = 145 bits (73), Expect = 2e-31
Identities = 287/357 (80%), Gaps = 1/357 (0%)
Strand = Plus / Minus
Query: 191 gagatgtcgacggtgggcctcagctcggcgcagacctcgatggcgccgtggacggggtcc 250
||||| || ||||| ||||| |||| ||||||||||| ||||| || ||||| || ||
Sbjct: 1745 gagatatcaacggtaggcctgagctgtgcgcagacctcaatggcaccatggactggatca 1686
Query: 251 gacatgaagttgctgatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaac 310
|| | |||||| ||||| ||||| |||||| | ||| | ||||||| | |||||
Sbjct: 1685 gagaagaagttactgattaggtctctgttgattgctgcaccactgtccacagccacaaga 1626
Query: 311 gcctgctgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggcc 370
|| || ||||||||||||||||| || || |||||||| |||||||| |||| | ||
Sbjct: 1625 gcttgttgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgct 1566
Query: 371 cgtcgtcgagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcag 430
|| || ||||||||||| |||||||||| ||| || | |||||||| || ||||| ||
Sbjct: 1565 -gtggttgagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttag 1507
Query: 431 cgagtccactgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttctt 490
|||||||| || || ||||| |||||||||||||| || ||||| |||||||| |||||
Sbjct: 1506 agagtccacggattcaatcacactctcgttgatgatttctgagtaagagtgacctttctt 1447
Query: 491 cctcagcacctcgatctgggccatcataagtgcaacgtaaactccagccgtgaaggg 547
||||| | ||| ||||| |||||||||||||| || ||||||||||| ||||||||
Sbjct: 1446 cctcaagatctcaatctgagccatcataagtgctacataaactccagcggtgaaggg 1390
>emb| BX823796.1 |CNS0A4R1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS76ZD11 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1983
Score = 131 bits (66), Expect = 3e-27
Identities = 301/378 (79%), Gaps = 1/378 (0%)
Strand = Plus / Minus
Query: 170 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 229
||||| ||||| || | ||| ||||| || ||||| ||||| |||| |||||||||||
Sbjct: 1803 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1744
Query: 230 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 289
||||| || ||||| || || || | |||||| ||||| ||||| |||||| | |||
Sbjct: 1743 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1684
Query: 290 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 349
| ||||||| | ||||| || || ||||||||||||||||| || || ||||||||
Sbjct: 1683 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1624
Query: 350 ttcctcgaccccagccgggcccgtcgtcgagcagttgtccaccatgaaggccaccccacg 409
|||||||| |||| | || || || ||||||||||| |||||||||| ||| ||
Sbjct: 1623 ttcctcgaacccaatcttgct-gtggttgagcagttgtcaaccatgaaggacactcccgt 1565
Query: 410 cgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctc 469
|||||||| | ||||| || |||||||| || || ||||| |||||||||||||| ||
Sbjct: 1564 ggcgtgcataagtgggtttagagagtccacggattcaatcacactctcgttgatgatttc 1505
Query: 470 agagtaggagtgacccttcttcctcagcacctcgatctgggccatcataagtgcaacgta 529
||||| |||||||| |||||||||| | ||| ||||| |||||||||||||| || ||
Sbjct: 1504 tgagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacata 1445
Query: 530 aactccagccgtgaaggg 547
||||||||| ||||||||
Sbjct: 1444 aactccagcggtgaaggg 1427
>emb| X69880.1 |ATAAI A.thaliana gene for acetohydroxy acid isomeroreductase
Length = 4395
Score = 107 bits (54), Expect = 4e-20
Identities = 259/326 (79%), Gaps = 1/326 (0%)
Strand = Plus / Minus
Query: 170 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 229
||||| ||||| || | ||| ||||| || ||||| ||||| |||| |||||||||||
Sbjct: 4127 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 4068
Query: 230 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 289
||||| || ||||| || || || | |||||| ||||| ||||| |||||| | |||
Sbjct: 4067 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 4008
Query: 290 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 349
| ||||||| | ||||| || || ||||||||||||||||| || || ||||||||
Sbjct: 4007 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 3948
Query: 350 ttcctcgaccccagccgggcccgtcgtcgagcagttgtccaccatgaaggccaccccacg 409
|||||||| |||| | || || || ||||||||||| |||||||||| ||| || |
Sbjct: 3947 ttcctcgaacccaatcttgct-gtggttgagcagttgtcaaccatgaaggacactcccct 3889
Query: 410 cgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctc 469
|||||||| || ||||| || |||||||| || || ||||| |||||||||||||| ||
Sbjct: 3888 ggcgtgcataaatgggtttagagagtccacggattcaatcacactctcgttgatgatttc 3829
Query: 470 agagtaggagtgacccttcttcctca 495
||||| |||||||| ||||||||||
Sbjct: 3828 tgagtaagagtgacctttcttcctca 3803
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 510 gccatcataagtgcaacgtaaactccagccgtgaaggg 547
|||||||||||||| || ||||||||||| ||||||||
Sbjct: 3441 gccatcataagtgctacataaactccagcggtgaaggg 3404
>emb| AL137082.1 |ATF14P22 Arabidopsis thaliana DNA chromosome 3, BAC clone F14P22
Length = 94239
Score = 107 bits (54), Expect = 4e-20
Identities = 259/326 (79%), Gaps = 1/326 (0%)
Strand = Plus / Minus
Query: 170 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 229
||||| ||||| || | ||| ||||| || ||||| ||||| |||| |||||||||||
Sbjct: 68106 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 68047
Query: 230 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 289
||||| || ||||| || || || | |||||| ||||| ||||| |||||| | |||
Sbjct: 68046 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 67987
Query: 290 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 349
| ||||||| | ||||| || || ||||||||||||||||| || || ||||||||
Sbjct: 67986 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 67927
Query: 350 ttcctcgaccccagccgggcccgtcgtcgagcagttgtccaccatgaaggccaccccacg 409
|||||||| |||| | || || || ||||||||||| |||||||||| ||| || |
Sbjct: 67926 ttcctcgaacccaatcttgct-gtggttgagcagttgtcaaccatgaaggacactcccct 67868
Query: 410 cgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctc 469
|||||||| || ||||| || |||||||| || || ||||| |||||||||||||| ||
Sbjct: 67867 ggcgtgcataaatgggtttagagagtccacggattcaatcacactctcgttgatgatttc 67808
Query: 470 agagtaggagtgacccttcttcctca 495
||||| |||||||| ||||||||||
Sbjct: 67807 tgagtaagagtgacctttcttcctca 67782
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 510 gccatcataagtgcaacgtaaactccagccgtgaaggg 547
|||||||||||||| || ||||||||||| ||||||||
Sbjct: 67420 gccatcataagtgctacataaactccagcggtgaaggg 67383
>emb| Y17796.1 |PSY17796 Pisum sativum mRNA for ketol-acid reductoisomerase
Length = 2036
Score = 103 bits (52), Expect = 6e-19
Identities = 230/288 (79%), Gaps = 1/288 (0%)
Strand = Plus / Minus
Query: 230 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 289
||||| ||||| || ||||| |||| |||||||||||| ||||||||||||||||| ||
Sbjct: 1658 atggccccgtgcactgggtctgacacgaagttgctgatcaggtcctggttgatgggagct 1599
Query: 290 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 349
| ||||||| | ||| || |||||||| || || ||||| || || | ||| |||||
Sbjct: 1598 ccactgtccactgccaccaaggcctgctgagttagaatgtaatcaaatctgggagcccat 1539
Query: 350 ttcctcgaccccagccgggcccgtcgtcgagcagttgtccaccatgaaggccaccccacg 409
||||| || |||| || || || || ||||||||||| |||||||| | || || ||
Sbjct: 1538 ttccttgaacccaaccttgct-gtggttgagcagttgtcaaccatgaaagaaacaccgcg 1480
Query: 410 cgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctc 469
|| |||||||| || |||| || || || ||||||||||| ||||| || ||||| ||
Sbjct: 1479 agcatgcatgaatggattcaaagaatcaacagactcgatcacactctcattaatgatttc 1420
Query: 470 agagtaggagtgacccttcttcctcagcacctcgatctgggccatcat 517
|||||| || || ||||||||||||| ||||| ||||||||||||||
Sbjct: 1419 agagtaagaatgccccttcttcctcaagacctcaatctgggccatcat 1372
>emb| X57073.1 |SOAHRI S.oleracea AHRI mRNA for acetohydroxy acid reductoisomerase
Length = 2050
Score = 101 bits (51), Expect = 2e-18
Identities = 111/131 (84%)
Strand = Plus / Minus
Query: 414 tgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctcagag 473
|||||||| ||||||| || ||||||| || ||||| ||||||||||||||||| |||
Sbjct: 1545 tgcatgaaggggttcaaggaatccactgcttcaatcacactctcgttgatgatctccgag 1486
Query: 474 taggagtgacccttcttcctcagcacctcgatctgggccatcataagtgcaacgtaaact 533
|| ||||||||||||||||||| | ||| |||||||||||||| || ||||| || ||
Sbjct: 1485 tacgagtgacccttcttcctcaagatctctatctgggccatcattagagcaacatagaca 1426
Query: 534 ccagccgtgaa 544
||||| |||||
Sbjct: 1425 ccagcagtgaa 1415
>gb| AY702346.1 | Phytophthora infestans ketol-acid reductoisomerase mRNA, partial cds
Length = 1257
Score = 101 bits (51), Expect = 2e-18
Identities = 115/135 (85%), Gaps = 1/135 (0%)
Strand = Plus / Minus
Query: 311 gcctgctgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggcc 370
||||||| |||||||||||||||||||| || |||||||| | || ||||| || ||
Sbjct: 1130 gcctgctccgtcaggatgtagtcgaagcgaggagcccacttacgggagcccagacgagcg 1071
Query: 371 cgtcgtcgagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcag 430
||||| |||||||||||||||||| |||| || || || ||||||||| ||||||||||
Sbjct: 1070 -gtcgtggagcagttgtccaccatgtaggcgacgccgcgagcgtgcatgtacgggttcag 1012
Query: 431 cgagtccactgactc 445
||||||||| |||||
Sbjct: 1011 cgagtccacagactc 997
>emb| AJ251333.1 |PSA251333 Pisum sativum aair gene for acetohydroxy acid isomeroreductase, exons
1-9
Length = 3343
Score = 87.7 bits (44), Expect = 4e-14
Identities = 222/280 (79%), Gaps = 1/280 (0%)
Strand = Plus / Minus
Query: 230 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 289
||||| ||||| || ||||| |||| |||||||||||| ||||||||||||||||| ||
Sbjct: 3013 atggccccgtgcactgggtctgacacgaagttgctgatcaggtcctggttgatgggagct 2954
Query: 290 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 349
| ||||||| | ||| || |||||||| || || ||||| || || | ||| |||||
Sbjct: 2953 ccactgtccactgccaccaaggcctgctgagttagaatgtaatcaaatctgggagcccat 2894
Query: 350 ttcctcgaccccagccgggcccgtcgtcgagcagttgtccaccatgaaggccaccccacg 409
||||| || |||| || | | || || ||||||||||| |||||||| | || || ||
Sbjct: 2893 ttccttgaacccaaccttg-ctgtggttgagcagttgtcaaccatgaaagaaacaccgcg 2835
Query: 410 cgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctc 469
|| |||||||| || |||| || || || ||||||||||| ||||| || ||||| ||
Sbjct: 2834 agcatgcatgaatggattcaaagaatcaacagactcgatcacactctcattaatgatttc 2775
Query: 470 agagtaggagtgacccttcttcctcagcacctcgatctgg 509
|||||| || || ||||||||||||| ||||| ||||||
Sbjct: 2774 agagtaagaatgccccttcttcctcaagacctcaatctgg 2735
>gb| AC135231.23 | Medicago truncatula clone mth2-28m10, complete sequence
Length = 106771
Score = 67.9 bits (34), Expect = 3e-08
Identities = 209/266 (78%), Gaps = 1/266 (0%)
Strand = Plus / Plus
Query: 230 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 289
||||| ||||| || ||||| ||||||||||||||||| | |||||||||||| || ||
Sbjct: 73387 atggctccgtgcactgggtctgacatgaagttgctgattaagtcctggttgataggagct 73446
Query: 290 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 349
| |||||||| | ||| || |||||||| || ||||| || || || | ||| |||||
Sbjct: 73447 ccattgtccactgccaccaaagcctgctgagttaggatataatcaaatctgggggcccat 73506
Query: 350 ttcctcgaccccagccgggcccgtcgtcgagcagttgtccaccatgaaggccaccccacg 409
||||| || || | || | | || || ||||||||||| |||||||| | || || ||
Sbjct: 73507 ttccttgaacctaaccttg-ctgtggttgagcagttgtcaaccatgaaagaaacaccccg 73565
Query: 410 cgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctc 469
|| |||||||| || |||| || || ||||| |||||||| ||||| || ||||| ||
Sbjct: 73566 agcatgcatgaatggattcaaagaatcaactgattcgatcacactctcattaatgatttc 73625
Query: 470 agagtaggagtgacccttcttcctca 495
|||||| || || || ||||||||||
Sbjct: 73626 agagtaagaatgtcctttcttcctca 73651
>gb| DQ448854.1 | Theobroma cacao putative ketol acid reductoisomerase precursor-like
protein, mRNA, partial sequence
Length = 258
Score = 44.1 bits (22), Expect = 0.48
Identities = 99/125 (79%)
Strand = Plus / Minus
Query: 230 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 289
||||| ||||| || ||||| |||| |||||||||||| | || ||||||||||| |
Sbjct: 169 atggcaccgtgcaccgggtctgacaggaagttgctgatcngatcttggttgatgggggtg 110
Query: 290 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 349
|||| || || | ||| || ||||| ||||| |||||||| ||||| || || |||||
Sbjct: 109 cccttatcaactgccaccaaagcctgttgggtaaggatgtaatcgaatcgaggggcccat 50
Query: 350 ttcct 354
|||||
Sbjct: 49 ttcct 45
>gb| AC136921.8 | Mus musculus chromosome 17, clone RP23-210D4, complete sequence
Length = 244237
Score = 42.1 bits (21), Expect = 1.9
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 256 gaagttgctgatgaggtcctg 276
|||||||||||||||||||||
Sbjct: 46822 gaagttgctgatgaggtcctg 46842
>gb| AC129095.12 | Mus musculus strain C57BL/6J clone rp23-360g16 map 17, complete sequence
Length = 209946
Score = 42.1 bits (21), Expect = 1.9
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 256 gaagttgctgatgaggtcctg 276
|||||||||||||||||||||
Sbjct: 107699 gaagttgctgatgaggtcctg 107719
>gb| AC027251.6 | Homo sapiens chromosome 8, clone RP11-14G5, complete sequence
Length = 130377
Score = 42.1 bits (21), Expect = 1.9
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 478 agtgacccttcttcctcagcacctc 502
||||| |||||||||||||||||||
Sbjct: 36169 agtgatccttcttcctcagcacctc 36193
>dbj| AK035823.1 | Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
enriched library, clone:9630008E23 product:mitogen
activated protein kinase kinase kinase 4, full insert
sequence
Length = 3816
Score = 42.1 bits (21), Expect = 1.9
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 256 gaagttgctgatgaggtcctg 276
|||||||||||||||||||||
Sbjct: 2783 gaagttgctgatgaggtcctg 2803
>gb| AC153999.7 | Mus musculus 6 BAC RP24-395E8 (Roswell Park Cancer Institute (C57BL/6J
Male) Mouse BAC Library) complete sequence
Length = 188196
Score = 42.1 bits (21), Expect = 1.9
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 478 agtgacccttcttcctcagca 498
|||||||||||||||||||||
Sbjct: 36870 agtgacccttcttcctcagca 36850
>emb| BX119963.5 | Zebrafish DNA sequence from clone DKEY-6A5 in linkage group 4, complete
sequence
Length = 229125
Score = 42.1 bits (21), Expect = 1.9
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 44 acacagcagctcacaggttcaaaca 68
||||||||||||||||||| |||||
Sbjct: 144182 acacagcagctcacaggtttaaaca 144158
>gb| AC087901.20 | Mus musculus strain C57BL/6J chromosome 17 clone rp23-22l23, complete
sequence
Length = 214372
Score = 42.1 bits (21), Expect = 1.9
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 256 gaagttgctgatgaggtcctg 276
|||||||||||||||||||||
Sbjct: 151591 gaagttgctgatgaggtcctg 151611
>gb| AC154000.4 | Mus musculus 6 BAC RP24-313C5 (Roswell Park Cancer Institute (C57BL/6J
Male) Mouse BAC Library) complete sequence
Length = 198580
Score = 42.1 bits (21), Expect = 1.9
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 478 agtgacccttcttcctcagca 498
|||||||||||||||||||||
Sbjct: 39352 agtgacccttcttcctcagca 39372
>ref| XM_428106.1 | PREDICTED: Gallus gallus similar to hypothetical protein LOC255104
(LOC430549), partial mRNA
Length = 561
Score = 40.1 bits (20), Expect = 7.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 ctgacacagcagctcacagg 60
||||||||||||||||||||
Sbjct: 279 ctgacacagcagctcacagg 298
>ref| XM_789042.1 | PREDICTED: Strongylocentrotus purpuratus similar to Forkhead box
protein F1 (Forkhead-related protein FKHL5)
(Forkhead-related transcription factor 1) (FREAC-1)
(Forkhead-related activator-1) (LOC589400), mRNA
Length = 1248
Score = 40.1 bits (20), Expect = 7.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 253 catgaagttgctgatgaggt 272
||||||||||||||||||||
Sbjct: 206 catgaagttgctgatgaggt 187
>gb| AC032011.15 | Homo sapiens chromosome 15, clone RP11-435J9, complete sequence
Length = 201200
Score = 40.1 bits (20), Expect = 7.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 352 cctcgaccccagccgggccc 371
||||||||||||||||||||
Sbjct: 81730 cctcgaccccagccgggccc 81711
>gb| AY007310.1 | Coturnix coturnix target of Jun 3 (TOJ3) mRNA, complete cds
Length = 1772
Score = 40.1 bits (20), Expect = 7.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 264 tgatgaggtcctggttgatg 283
||||||||||||||||||||
Sbjct: 1575 tgatgaggtcctggttgatg 1556
>gb| AC091394.2 |AC091394 Homo sapiens chromosome 5 clone CTD-2231K23, complete sequence
Length = 134928
Score = 40.1 bits (20), Expect = 7.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 352 cctcgaccccagccgggccc 371
||||||||||||||||||||
Sbjct: 15611 cctcgaccccagccgggccc 15630
>gb| AC138666.6 | Mus musculus chromosome 5, clone RP24-140D11, complete sequence
Length = 209938
Score = 40.1 bits (20), Expect = 7.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 478 agtgacccttcttcctcagc 497
||||||||||||||||||||
Sbjct: 145642 agtgacccttcttcctcagc 145661
>gb| AC123917.25 | Mus musculus chromosome 15, clone RP23-281P5, complete sequence
Length = 184959
Score = 40.1 bits (20), Expect = 7.6
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 44 acacagcagctcacaggttcaaac 67
|||||||||| |||||||||||||
Sbjct: 108353 acacagcagcacacaggttcaaac 108376
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,444,531
Number of Sequences: 3902068
Number of extensions: 3444531
Number of successful extensions: 61287
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61149
Number of HSP's gapped (non-prelim): 125
length of query: 558
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 535
effective length of database: 17,143,297,704
effective search space: 9171664271640
effective search space used: 9171664271640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)