>CTTB2_CALJA (Q2QLF8) Cortactin-binding protein 2 (CortBP2)|
          Length = 1662

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -3

Query: 338 SVPSILPTPTIWWRLYGPASHAVPTPVSAIP--ANAGAPSTAATREFIP 198
           SVP+  P+        GP++ + P P S+IP   +  APSTA T    P
Sbjct: 368 SVPAFPPSSANRIEENGPSTGSTPDPTSSIPPLPSNAAPSTAQTPGITP 416

>NDC1_PONPY (Q5RBY5) Nucleoporin NDC1 (Transmembrane protein 48)|
          Length = 674

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +2

Query: 224 CWGRQHWPVWRILGWVRHARRGHITATIWWGWVVWRVLSTTMVV 355
           C GR    +WR+LGW        I A+I W  ++  + +T  ++
Sbjct: 9   CAGRSRDILWRVLGW-------RIVASIIWSVLLLPICTTVFII 45

>NDC1_HUMAN (Q9BTX1) Nucleoporin NDC1 (hNDC1) (Transmembrane protein 48)|
          Length = 674

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +2

Query: 224 CWGRQHWPVWRILGWVRHARRGHITATIWWGWVVWRVLSTTMVV 355
           C GR    +WR+LGW        I A+I W  +   + +T  ++
Sbjct: 9   CAGRSRDILWRVLGW-------RIVASIVWSVLFLPICTTVFII 45

>URE1_NOCFA (Q5YWR8) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase|
           alpha subunit)
          Length = 573

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = -3

Query: 329 SILPTPTIWWRLYGPASHAVPTPVSAIPA---NAGAPSTAAT 213
           ++L    I W   G A+ ++PTP   +P     A AP  AAT
Sbjct: 452 AVLKGGAIAWAAMGDANASIPTPQPVLPRPMFGAAAPVAAAT 493

>GAL7_TRIRE (Q96UI1) Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12)|
           (Gal-1-P uridylyltransferase)
           (UDP-glucose--hexose-1-phosphate uridylyltransferase)
          Length = 382

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -3

Query: 338 SVPSILPTPTIWWRLYGPASHAVPT-PVSAIPANAGAP 228
           S   ILPT   W RLY  A+H  P+ P+SA+ A    P
Sbjct: 129 SAKDILPTINHWTRLY--ANHLSPSNPLSAVAAQLQLP 164

>GGPPS_GIBFU (Q92236) Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)|
           (GGPPSase) (Geranylgeranyl diphosphate synthase)
           [Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10);
           Farnesyltranstransferase (EC 2.5
          Length = 418

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -2

Query: 105 AEDVGTTADDCKPLAGLPAFVFPICD*QLNLS 10
           AE  G +  DC PL  L   +F I D  +NLS
Sbjct: 283 AEANGPSPTDCVPLVNLIGLIFQIRDDYMNLS 314


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,885,177
Number of Sequences: 219361
Number of extensions: 655052
Number of successful extensions: 2723
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2722
length of database: 80,573,946
effective HSP length: 97
effective length of database: 59,295,929
effective search space used: 1423102296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)