Clone Name | rbasd26d22 |
---|---|
Clone Library Name | barley_pub |
>VATG1_TOBAC (O82702) Vacuolar ATP synthase subunit G 1 (EC 3.6.3.14) (V-ATPase| G subunit 1) (Vacuolar proton pump G subunit 1) Length = 110 Score = 94.4 bits (233), Expect = 2e-19 Identities = 53/110 (48%), Positives = 62/110 (56%) Frame = -1 Query: 588 MDASRRPSGIXXXXXXXXXXXQIVNXXXXXXXXXXXXXXXXXXXXXXXXXAQMEADFQRK 409 M +S +GI IVN A MEA+FQRK Sbjct: 1 MASSSGQNGIQLLLAAEQEAQHIVNNARTAKQARLKQAKEEAEKEIAEFRAYMEAEFQRK 60 Query: 408 LTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 259 L +TSGDSGANVKRLEQET+ KIE LK +A +SP+V+QMLLRHVTTVKN Sbjct: 61 LEQTSGDSGANVKRLEQETDAKIEHLKTEAERVSPDVVQMLLRHVTTVKN 110
>VATG1_ARATH (O82628) Vacuolar ATP synthase subunit G 1 (EC 3.6.3.14) (V-ATPase| G subunit 1) (Vacuolar proton pump G subunit 1) Length = 110 Score = 93.6 bits (231), Expect = 4e-19 Identities = 52/110 (47%), Positives = 62/110 (56%) Frame = -1 Query: 588 MDASRRPSGIXXXXXXXXXXXQIVNXXXXXXXXXXXXXXXXXXXXXXXXXAQMEADFQRK 409 M+++R I IVN AQ E DFQRK Sbjct: 1 MESNRGQGSIQQLLAAEVEAQHIVNAARTAKMARLKQAKEEAEKEIAEYKAQTEQDFQRK 60 Query: 408 LTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 259 L ETSGDSGANVKRLEQET+ KIEQLK +A+ IS +V++MLL+HVTTVKN Sbjct: 61 LEETSGDSGANVKRLEQETDTKIEQLKNEASRISKDVVEMLLKHVTTVKN 110
>VATG2_TOBAC (O82703) Vacuolar ATP synthase subunit G 2 (EC 3.6.3.14) (V-ATPase| G subunit 2) (Vacuolar proton pump G subunit 2) Length = 111 Score = 82.4 bits (202), Expect = 9e-16 Identities = 41/58 (70%), Positives = 49/58 (84%) Frame = -1 Query: 432 MEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 259 MEA+FQR + +TSGDSGANVKRLEQET KI+ LK +A +IS +V+QMLLR VTTVKN Sbjct: 54 MEAEFQRNVEQTSGDSGANVKRLEQETFAKIQHLKTEAESISHDVVQMLLRQVTTVKN 111
>VATG_CITLI (Q9SP55) Vacuolar ATP synthase subunit G (EC 3.6.3.14) (V-ATPase G| subunit) (Vacuolar proton pump G subunit) Length = 110 Score = 80.1 bits (196), Expect = 4e-15 Identities = 40/59 (67%), Positives = 46/59 (77%) Frame = -1 Query: 435 QMEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 259 Q+E +FQRKL E+ GDSGANVKRLEQET VKI LK A I +V+QM L+HVTTVKN Sbjct: 52 QVEREFQRKLAESVGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMFLKHVTTVKN 110
>VATG2_ARATH (O82629) Vacuolar ATP synthase subunit G 2 (EC 3.6.3.14) (V-ATPase| G subunit 2) (Vacuolar proton pump G subunit 2) Length = 106 Score = 80.1 bits (196), Expect = 4e-15 Identities = 40/57 (70%), Positives = 46/57 (80%) Frame = -1 Query: 429 EADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 259 E FQRKL TSGDSGANVKRLEQET+ KIEQLK +A IS +V+ MLL++VTTV N Sbjct: 50 EQGFQRKLEATSGDSGANVKRLEQETDAKIEQLKNEATRISKDVVDMLLKNVTTVNN 106
>VATG3_ARATH (Q9SZH0) Vacuolar ATP synthase subunit G 3 (EC 3.6.3.14) (V-ATPase| G subunit 3) (Vacuolar proton pump G subunit 3) Length = 108 Score = 48.9 bits (115), Expect = 1e-05 Identities = 27/107 (25%), Positives = 53/107 (49%) Frame = -1 Query: 588 MDASRRPSGIXXXXXXXXXXXQIVNXXXXXXXXXXXXXXXXXXXXXXXXXAQMEADFQRK 409 MD+ R GI +IV+ +++E ++Q + Sbjct: 1 MDSLRGQGGIQMLLTAEQEAGRIVSAARTAKLARMKQAKDEAEKEMEEYRSRLEEEYQTQ 60 Query: 408 LTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTT 268 ++ T D A+ KRL+ ET+V+I LK+ ++ +S ++++ML+++VTT Sbjct: 61 VSGT--DQEADAKRLDDETDVRITNLKESSSKVSKDIVKMLIKYVTT 105
>OR83A_DROME (Q9VNB3) Putative odorant receptor 83a| Length = 453 Score = 31.2 bits (69), Expect = 2.4 Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 3/56 (5%) Frame = +1 Query: 316 CCLLLELFNFYVCLLLKAFDICT-RVTAGLGELSLEISLHLRTV--LSYLSLRLFF 474 C L ELFN++V + + ICT + G G+L ++ ++T+ L ++++L+F Sbjct: 52 CDLTYELFNYFVSVHIAGLYICTIYINYGQGDLDFFVNCLIQTIIYLWTIAMKLYF 107
>DNAK1_SYNEL (Q8DKR6) Chaperone protein dnaK1 (Heat shock protein 70-1) (Heat| shock 70 kDa protein 1) (HSP70-1) Length = 651 Score = 31.2 bits (69), Expect = 2.4 Identities = 13/53 (24%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Frame = -1 Query: 411 KLTETSGDSGANVKRLEQETNV--KIEQLKQQAANISPEVIQMLLRHVTTVKN 259 ++T G S ++R+ QE + +++Q+K++ A + + +L + +T+KN Sbjct: 496 RITNRGGLSSMEIERMRQEAQIYAQVDQIKKEIAELRNQADALLYSYESTIKN 548
>GCSH_MOUSE (Q91WK5) Glycine cleavage system H protein, mitochondrial precursor| Length = 170 Score = 29.6 bits (65), Expect = 6.9 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +1 Query: 409 LSLEISLHLRTVLSYLSLRLFFCFPKPC 492 +SL++S LR V L L FC P+PC Sbjct: 1 MSLQVSRSLRVVAYSLRTALAFCSPRPC 28
>GDB3_WHEAT (P04730) Gamma-gliadin (Gliadin B-III) (Fragment)| Length = 244 Score = 29.6 bits (65), Expect = 6.9 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = +3 Query: 129 FPRQRTRNYSWKWQKPFLITPPKEINR*YKVVIIICRADSSTFSSS 266 FP Q +++ W+ Q+PFL P + + +VV II A +T S+ Sbjct: 5 FPLQPQQSFLWQSQQPFLQQPQQPSPQPQQVVQIISPATPTTIPSA 50
>Y603_HAEIN (P44773) Protein HI0603| Length = 230 Score = 29.3 bits (64), Expect = 9.1 Identities = 14/49 (28%), Positives = 22/49 (44%) Frame = -1 Query: 435 QMEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQM 289 Q A Q+KLT +GAN+ N ++ QL+Q + Q+ Sbjct: 63 QQMAKIQQKLTALENQTGANLSSNNTNNNKRLTQLEQSLKTAQENIAQL 111
>ALF4_ARATH (Q84VX3) Aberrant root formation protein 4| Length = 626 Score = 29.3 bits (64), Expect = 9.1 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = -2 Query: 215 VLSVYFFGRCYKKWLLPLPAVIPCSLS 135 +LS + YK+WLLPL ++ CS++ Sbjct: 560 ILSKKNLEKAYKEWLLPLRTLVSCSIA 586 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,377,841 Number of Sequences: 219361 Number of extensions: 1317949 Number of successful extensions: 3604 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 3536 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3604 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5253413348 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)