ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26d22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1VATG1_TOBAC (O82702) Vacuolar ATP synthase subunit G 1 (EC 3.6.3... 94 2e-19
2VATG1_ARATH (O82628) Vacuolar ATP synthase subunit G 1 (EC 3.6.3... 94 4e-19
3VATG2_TOBAC (O82703) Vacuolar ATP synthase subunit G 2 (EC 3.6.3... 82 9e-16
4VATG_CITLI (Q9SP55) Vacuolar ATP synthase subunit G (EC 3.6.3.14... 80 4e-15
5VATG2_ARATH (O82629) Vacuolar ATP synthase subunit G 2 (EC 3.6.3... 80 4e-15
6VATG3_ARATH (Q9SZH0) Vacuolar ATP synthase subunit G 3 (EC 3.6.3... 49 1e-05
7OR83A_DROME (Q9VNB3) Putative odorant receptor 83a 31 2.4
8DNAK1_SYNEL (Q8DKR6) Chaperone protein dnaK1 (Heat shock protein... 31 2.4
9GCSH_MOUSE (Q91WK5) Glycine cleavage system H protein, mitochond... 30 6.9
10GDB3_WHEAT (P04730) Gamma-gliadin (Gliadin B-III) (Fragment) 30 6.9
11Y603_HAEIN (P44773) Protein HI0603 29 9.1
12ALF4_ARATH (Q84VX3) Aberrant root formation protein 4 29 9.1

>VATG1_TOBAC (O82702) Vacuolar ATP synthase subunit G 1 (EC 3.6.3.14) (V-ATPase|
           G subunit 1) (Vacuolar proton pump G subunit 1)
          Length = 110

 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 53/110 (48%), Positives = 62/110 (56%)
 Frame = -1

Query: 588 MDASRRPSGIXXXXXXXXXXXQIVNXXXXXXXXXXXXXXXXXXXXXXXXXAQMEADFQRK 409
           M +S   +GI            IVN                         A MEA+FQRK
Sbjct: 1   MASSSGQNGIQLLLAAEQEAQHIVNNARTAKQARLKQAKEEAEKEIAEFRAYMEAEFQRK 60

Query: 408 LTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 259
           L +TSGDSGANVKRLEQET+ KIE LK +A  +SP+V+QMLLRHVTTVKN
Sbjct: 61  LEQTSGDSGANVKRLEQETDAKIEHLKTEAERVSPDVVQMLLRHVTTVKN 110



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>VATG1_ARATH (O82628) Vacuolar ATP synthase subunit G 1 (EC 3.6.3.14) (V-ATPase|
           G subunit 1) (Vacuolar proton pump G subunit 1)
          Length = 110

 Score = 93.6 bits (231), Expect = 4e-19
 Identities = 52/110 (47%), Positives = 62/110 (56%)
 Frame = -1

Query: 588 MDASRRPSGIXXXXXXXXXXXQIVNXXXXXXXXXXXXXXXXXXXXXXXXXAQMEADFQRK 409
           M+++R    I            IVN                         AQ E DFQRK
Sbjct: 1   MESNRGQGSIQQLLAAEVEAQHIVNAARTAKMARLKQAKEEAEKEIAEYKAQTEQDFQRK 60

Query: 408 LTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 259
           L ETSGDSGANVKRLEQET+ KIEQLK +A+ IS +V++MLL+HVTTVKN
Sbjct: 61  LEETSGDSGANVKRLEQETDTKIEQLKNEASRISKDVVEMLLKHVTTVKN 110



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>VATG2_TOBAC (O82703) Vacuolar ATP synthase subunit G 2 (EC 3.6.3.14) (V-ATPase|
           G subunit 2) (Vacuolar proton pump G subunit 2)
          Length = 111

 Score = 82.4 bits (202), Expect = 9e-16
 Identities = 41/58 (70%), Positives = 49/58 (84%)
 Frame = -1

Query: 432 MEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 259
           MEA+FQR + +TSGDSGANVKRLEQET  KI+ LK +A +IS +V+QMLLR VTTVKN
Sbjct: 54  MEAEFQRNVEQTSGDSGANVKRLEQETFAKIQHLKTEAESISHDVVQMLLRQVTTVKN 111



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>VATG_CITLI (Q9SP55) Vacuolar ATP synthase subunit G (EC 3.6.3.14) (V-ATPase G|
           subunit) (Vacuolar proton pump G subunit)
          Length = 110

 Score = 80.1 bits (196), Expect = 4e-15
 Identities = 40/59 (67%), Positives = 46/59 (77%)
 Frame = -1

Query: 435 QMEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 259
           Q+E +FQRKL E+ GDSGANVKRLEQET VKI  LK  A  I  +V+QM L+HVTTVKN
Sbjct: 52  QVEREFQRKLAESVGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMFLKHVTTVKN 110



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>VATG2_ARATH (O82629) Vacuolar ATP synthase subunit G 2 (EC 3.6.3.14) (V-ATPase|
           G subunit 2) (Vacuolar proton pump G subunit 2)
          Length = 106

 Score = 80.1 bits (196), Expect = 4e-15
 Identities = 40/57 (70%), Positives = 46/57 (80%)
 Frame = -1

Query: 429 EADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 259
           E  FQRKL  TSGDSGANVKRLEQET+ KIEQLK +A  IS +V+ MLL++VTTV N
Sbjct: 50  EQGFQRKLEATSGDSGANVKRLEQETDAKIEQLKNEATRISKDVVDMLLKNVTTVNN 106



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>VATG3_ARATH (Q9SZH0) Vacuolar ATP synthase subunit G 3 (EC 3.6.3.14) (V-ATPase|
           G subunit 3) (Vacuolar proton pump G subunit 3)
          Length = 108

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 27/107 (25%), Positives = 53/107 (49%)
 Frame = -1

Query: 588 MDASRRPSGIXXXXXXXXXXXQIVNXXXXXXXXXXXXXXXXXXXXXXXXXAQMEADFQRK 409
           MD+ R   GI           +IV+                         +++E ++Q +
Sbjct: 1   MDSLRGQGGIQMLLTAEQEAGRIVSAARTAKLARMKQAKDEAEKEMEEYRSRLEEEYQTQ 60

Query: 408 LTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTT 268
           ++ T  D  A+ KRL+ ET+V+I  LK+ ++ +S ++++ML+++VTT
Sbjct: 61  VSGT--DQEADAKRLDDETDVRITNLKESSSKVSKDIVKMLIKYVTT 105



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>OR83A_DROME (Q9VNB3) Putative odorant receptor 83a|
          Length = 453

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
 Frame = +1

Query: 316 CCLLLELFNFYVCLLLKAFDICT-RVTAGLGELSLEISLHLRTV--LSYLSLRLFF 474
           C L  ELFN++V + +    ICT  +  G G+L   ++  ++T+  L  ++++L+F
Sbjct: 52  CDLTYELFNYFVSVHIAGLYICTIYINYGQGDLDFFVNCLIQTIIYLWTIAMKLYF 107



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>DNAK1_SYNEL (Q8DKR6) Chaperone protein dnaK1 (Heat shock protein 70-1) (Heat|
           shock 70 kDa protein 1) (HSP70-1)
          Length = 651

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 13/53 (24%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
 Frame = -1

Query: 411 KLTETSGDSGANVKRLEQETNV--KIEQLKQQAANISPEVIQMLLRHVTTVKN 259
           ++T   G S   ++R+ QE  +  +++Q+K++ A +  +   +L  + +T+KN
Sbjct: 496 RITNRGGLSSMEIERMRQEAQIYAQVDQIKKEIAELRNQADALLYSYESTIKN 548



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>GCSH_MOUSE (Q91WK5) Glycine cleavage system H protein, mitochondrial precursor|
          Length = 170

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 409 LSLEISLHLRTVLSYLSLRLFFCFPKPC 492
           +SL++S  LR V   L   L FC P+PC
Sbjct: 1   MSLQVSRSLRVVAYSLRTALAFCSPRPC 28



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>GDB3_WHEAT (P04730) Gamma-gliadin (Gliadin B-III) (Fragment)|
          Length = 244

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = +3

Query: 129 FPRQRTRNYSWKWQKPFLITPPKEINR*YKVVIIICRADSSTFSSS 266
           FP Q  +++ W+ Q+PFL  P +   +  +VV II  A  +T  S+
Sbjct: 5   FPLQPQQSFLWQSQQPFLQQPQQPSPQPQQVVQIISPATPTTIPSA 50



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>Y603_HAEIN (P44773) Protein HI0603|
          Length = 230

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = -1

Query: 435 QMEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQM 289
           Q  A  Q+KLT     +GAN+       N ++ QL+Q        + Q+
Sbjct: 63  QQMAKIQQKLTALENQTGANLSSNNTNNNKRLTQLEQSLKTAQENIAQL 111



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>ALF4_ARATH (Q84VX3) Aberrant root formation protein 4|
          Length = 626

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -2

Query: 215 VLSVYFFGRCYKKWLLPLPAVIPCSLS 135
           +LS     + YK+WLLPL  ++ CS++
Sbjct: 560 ILSKKNLEKAYKEWLLPLRTLVSCSIA 586


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,377,841
Number of Sequences: 219361
Number of extensions: 1317949
Number of successful extensions: 3604
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3604
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5253413348
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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