ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd25o22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK066463.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
2gb|AC093953.2| Oryza sativa (japonica cultivar-group) chromosome... 84 6e-13
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
4gb|DQ429696.1| Sorghum propinquum locus pSB1307 genomic sequence 80 9e-12
5gb|DQ429695.1| Sorghum bicolor voucher PI585454 locus pSB1307 ge... 80 9e-12
6gb|DQ429694.1| Sorghum bicolor voucher PI267539 locus pSB1307 ge... 80 9e-12
7gb|DQ429693.1| Sorghum bicolor voucher PI267408 locus pSB1307 ge... 80 9e-12
8gb|DQ429692.1| Sorghum bicolor voucher PI221607 locus pSB1307 ge... 80 9e-12
9gb|DQ429691.1| Sorghum bicolor voucher PI152702 locus pSB1307 ge... 80 9e-12
10gb|DQ429690.1| Sorghum bicolor voucher NSL92371 locus pSB1307 ge... 80 9e-12
11gb|DQ429689.1| Sorghum bicolor voucher NSL87902 locus pSB1307 ge... 80 9e-12
12gb|DQ429688.1| Sorghum bicolor voucher NSL87666 locus pSB1307 ge... 80 9e-12
13gb|DQ429687.1| Sorghum bicolor voucher NSL77217 locus pSB1307 ge... 80 9e-12
14gb|DQ429686.1| Sorghum bicolor voucher NSL77034 locus pSB1307 ge... 80 9e-12
15gb|DQ429684.1| Sorghum bicolor voucher NSL56003 locus pSB1307 ge... 80 9e-12
16gb|DQ429682.1| Sorghum bicolor voucher NSL51365 locus pSB1307 ge... 80 9e-12
17gb|DQ429681.1| Sorghum bicolor voucher NSL51030 locus pSB1307 ge... 80 9e-12
18gb|DQ429685.1| Sorghum bicolor voucher NSL56174 locus pSB1307 ge... 72 2e-09
19gb|DQ429683.1| Sorghum bicolor voucher NSL55243 locus pSB1307 ge... 72 2e-09
20gb|DQ429680.1| Sorghum bicolor voucher NSL50875 locus pSB1307 ge... 72 2e-09
21ref|NM_001036604.1| Arabidopsis thaliana unknown protein AT4G204... 44 0.48
22ref|NM_118159.2| Arabidopsis thaliana transcription factor AT4G2... 44 0.48
23gb|BT010548.1| Arabidopsis thaliana At4g20400 gene, complete cds 44 0.48
24emb|AL161553.2|ATCHRIV53 Arabidopsis thaliana DNA chromosome 4, ... 44 0.48
25emb|AL080253.2|ATF9F13 Arabidopsis thaliana DNA chromosome 4, BA... 44 0.48
26gb|AC010985.8| Homo sapiens BAC clone RP11-521O14 from 2, comple... 44 0.48
27gb|BT002486.1| Arabidopsis thaliana putative protein (At4g20400)... 44 0.48
28gb|AC135427.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
29ref|XM_476089.1| Oryza sativa (japonica cultivar-group), predic... 42 1.9
30gb|AC132493.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
31gb|AC073136.6| Homo sapiens BAC clone RP11-700P18 from 7, comple... 42 1.9
32gb|AC104042.5| Homo sapiens chromosome 11, clone CTD-2119L1, com... 42 1.9
33gb|AC148939.8| Pan troglodytes BAC clone CH251-51M11 from chromo... 42 1.9
34gb|AC079073.7| Homo sapiens chromosome 11, clone RP11-72A10, com... 42 1.9
35gb|AC150749.3| Pan troglodytes BAC clone CH251-553P23 from chrom... 42 1.9
36dbj|AK121381.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
37dbj|AP001880.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 1.9
38gb|AC183535.3| Pan troglodytes BAC clone CH251-511O21 from chrom... 40 7.6
39ref|XM_980077.1| PREDICTED: Mus musculus storkhead box 1 (Stox1)... 40 7.6
40ref|XM_905594.2| PREDICTED: Mus musculus storkhead box 1 (Stox1)... 40 7.6
41ref|XM_125685.5| PREDICTED: Mus musculus storkhead box 1 (Stox1)... 40 7.6
42gb|AC122539.4| Mus musculus BAC clone RP24-550H10 from chromosom... 40 7.6
43gb|AC124725.3| Mus musculus BAC clone RP23-459F16 from chromosom... 40 7.6
44emb|AL157815.12| Human DNA sequence from clone RP11-306O1 on chr... 40 7.6
45emb|AL031745.8|PFMAL1P2 Plasmodium falciparum DNA from MAL1P2 40 7.6
46dbj|AK124731.1| Homo sapiens cDNA FLJ42741 fis, clone BRAWH2016702 40 7.6
47gb|AC141420.11| Pan troglodytes clone rp43-149n17, complete sequ... 40 7.6
48gb|AC010242.7| Homo sapiens chromosome 5 clone CTC-359E10, compl... 40 7.6
49gb|AC090142.3| Homo sapiens chromosome 8, clone RP11-200A13, com... 40 7.6
50gb|AC093860.3| Homo sapiens BAC clone RP11-538D9 from 4, complet... 40 7.6
51gb|AC091435.3| Homo sapiens chromosome 5 clone RP11-122C5, compl... 40 7.6
52gb|AC018868.4| Homo sapiens BAC clone RP11-83J16 from 15, comple... 40 7.6
53gb|AC008816.8| Homo sapiens chromosome 5 clone CTD-2122K17, comp... 40 7.6
54dbj|AK133671.1| Mus musculus adult male pituitary gland cDNA, RI... 40 7.6
55gb|AC026713.5| Homo sapiens chromosome 5 clone CTD-2127H9, compl... 40 7.6
56gb|AC142245.14| Mus musculus chromosome 15, clone RP23-82J20, co... 40 7.6
57dbj|AK028920.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 40 7.6
58gb|AC021546.7|AC021546 Homo sapiens chromosome 8, clone RP11-574... 40 7.6
59gb|AC017093.3|AC017093 Homo sapiens BAC clone RP11-511G7 from 5,... 40 7.6
60dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
61gb|AC020941.5| Homo sapiens chromosome 5 clone CTD-2312I9, compl... 40 7.6
62emb|BX296556.4| Zebrafish DNA sequence from clone CH211-234E14 i... 40 7.6
63dbj|BS000245.1| Pan troglodytes chromosome 22 clone:PTB-059I14, ... 40 7.6
64dbj|BS000244.1| Pan troglodytes chromosome 22 clone:PTB-070F15, ... 40 7.6
65emb|BX927078.22| Zebrafish DNA sequence from clone CH211-284J7 i... 40 7.6
66dbj|AP001760.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 7.6
67dbj|AP000338.3| Homo sapiens genomic DNA, chromosome 21q, clone:... 40 7.6
68emb|BX294446.6| Mouse DNA sequence from clone RP23-459F16 on chr... 40 7.6
69emb|AL606729.3|OSJN00107 Oryza sativa genomic DNA, chromosome 4,... 40 7.6
70dbj|AP000216.1| Homo sapiens genomic DNA, chromosome 21q22.3-ter... 40 7.6 
>dbj|AK066463.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065F17, full
            insert sequence
          Length = 3421

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 153/188 (81%), Gaps = 2/188 (1%)
 Strand = Plus / Minus

                                                                        
Query: 372  ggatctanagcctcgattacctnaatgattggtggggaaaagaaaccaaacatttcaagc 431
            ||||||| |||||||||| ||| ||| || || | ||| ||||| |||||||||||||| 
Sbjct: 2745 ggatctagagcctcgatttccttaattataggggaggataagaacccaaacatttcaagt 2686

                                                                        
Query: 432  ccatttacagaatcgttggataataaagtaggaacgccanatttgccagc-cttatgttg 490
            ||||| | ||||| |  |||||  |||  ||||| |||| |||| |||   ||||| |||
Sbjct: 2685 ccattcaaagaattgcaggatagaaaatcaggaaggccagattttccaaaacttat-ttg 2627

                                                                        
Query: 491  cttttttatttcttcattcaccctgtctctcacactatcccaacattgcattggtgaagt 550
             |||  |||||||||||| || |||||||| |||||  ||||||||||||||||||| ||
Sbjct: 2626 ttttgctatttcttcatttactctgtctcttacactgccccaacattgcattggtgatgt 2567

                    
Query: 551  gtgagtaa 558
            ||||||||
Sbjct: 2566 gtgagtaa 2559
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>gb|AC093953.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1057_C01,
              complete sequence
          Length = 142752

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                          
Query: 497    tatttcttcattcaccctgtctctcacactatcccaacattgcattggtgaagtgtgagt 556
              |||||||||||| || |||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 124765 tatttcttcatttactctgtctcttacactgtcccaacattgcattggtgatgtgtgagt 124824

                
Query: 557    aa 558
              ||
Sbjct: 124825 aa 124826
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                            
Query: 497      tatttcttcattcaccctgtctctcacactatcccaacattgcattggtgaagtgtgagt 556
                |||||||||||| || |||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 13441302 tatttcttcatttactctgtctcttacactgtcccaacattgcattggtgatgtgtgagt 13441361

                  
Query: 557      aa 558
                ||
Sbjct: 13441362 aa 13441363



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                    
Query: 399     attggtggggaaaagaaaccaaacatttcaagcccat 435
               |||||||| || || ||||||||||||||||| ||||
Sbjct: 5863970 attggtggtgataataaaccaaacatttcaagaccat 5863934
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>gb|DQ429696.1| Sorghum propinquum locus pSB1307 genomic sequence
          Length = 816

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                  
Query: 389 tacctnaatgattggtggggaaaagaaaccaaacatttcaagcccatttacagaa 443
           ||||| ||||||| ||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 291 tacctgaatgatttgtggggacaagaacccaaacatttcaagcccatttacagaa 345



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 492 ttttttatttcttcattcaccctgtctctcacactatcccaacattgcattggtgaagtg 551
           |||| ||||| |||||| ||| ||||||| ||||||||||||||   ||||||||| |||
Sbjct: 394 ttttctatttgttcattgaccttgtctctaacactatcccaacaactcattggtgaggtg 453

                
Query: 552 tgagt 556
           |||||
Sbjct: 454 tgagt 458
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>gb|DQ429695.1| Sorghum bicolor voucher PI585454 locus pSB1307 genomic sequence
          Length = 802

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                  
Query: 389 tacctnaatgattggtggggaaaagaaaccaaacatttcaagcccatttacagaa 443
           ||||| ||||||| ||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 278 tacctgaatgatttgtggggacaagaacccaaacatttcaagcccatttacagaa 332



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 492 ttttttatttcttcattcaccctgtctctcacactatcccaacattgcattggtgaagtg 551
           |||| ||||| |||||| ||| ||||||| ||||||||||||||   ||||||||| |||
Sbjct: 381 ttttctatttgttcattgaccttgtctctaacactatcccaacaactcattggtgaggtg 440

            
Query: 552 t 552
           |
Sbjct: 441 t 441
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>gb|DQ429694.1| Sorghum bicolor voucher PI267539 locus pSB1307 genomic sequence
          Length = 802

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                  
Query: 389 tacctnaatgattggtggggaaaagaaaccaaacatttcaagcccatttacagaa 443
           ||||| ||||||| ||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 278 tacctgaatgatttgtggggacaagaacccaaacatttcaagcccatttacagaa 332



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 492 ttttttatttcttcattcaccctgtctctcacactatcccaacattgcattggtgaagtg 551
           |||| ||||| |||||| ||| ||||||| ||||||||||||||   ||||||||| |||
Sbjct: 381 ttttctatttgttcattgaccttgtctctaacactatcccaacaactcattggtgaggtg 440

            
Query: 552 t 552
           |
Sbjct: 441 t 441
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>gb|DQ429693.1| Sorghum bicolor voucher PI267408 locus pSB1307 genomic sequence
          Length = 802

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                  
Query: 389 tacctnaatgattggtggggaaaagaaaccaaacatttcaagcccatttacagaa 443
           ||||| ||||||| ||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 278 tacctgaatgatttgtggggacaagaacccaaacatttcaagcccatttacagaa 332



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 492 ttttttatttcttcattcaccctgtctctcacactatcccaacattgcattggtgaagtg 551
           |||| ||||| |||||| ||| ||||||| ||||||||||||||   ||||||||| |||
Sbjct: 381 ttttctatttgttcattgaccttgtctctaacactatcccaacaactcattggtgaggtg 440

            
Query: 552 t 552
           |
Sbjct: 441 t 441
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>gb|DQ429692.1| Sorghum bicolor voucher PI221607 locus pSB1307 genomic sequence
          Length = 802

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                  
Query: 389 tacctnaatgattggtggggaaaagaaaccaaacatttcaagcccatttacagaa 443
           ||||| ||||||| ||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 278 tacctgaatgatttgtggggacaagaacccaaacatttcaagcccatttacagaa 332



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 492 ttttttatttcttcattcaccctgtctctcacactatcccaacattgcattggtgaagtg 551
           |||| ||||| |||||| ||| ||||||| ||||||||||||||   ||||||||| |||
Sbjct: 381 ttttctatttgttcattgaccttgtctctaacactatcccaacaactcattggtgaggtg 440

            
Query: 552 t 552
           |
Sbjct: 441 t 441
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>gb|DQ429691.1| Sorghum bicolor voucher PI152702 locus pSB1307 genomic sequence
          Length = 802

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                  
Query: 389 tacctnaatgattggtggggaaaagaaaccaaacatttcaagcccatttacagaa 443
           ||||| ||||||| ||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 278 tacctgaatgatttgtggggacaagaacccaaacatttcaagcccatttacagaa 332



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 492 ttttttatttcttcattcaccctgtctctcacactatcccaacattgcattggtgaagtg 551
           |||| ||||| |||||| ||| ||||||| ||||||||||||||   ||||||||| |||
Sbjct: 381 ttttctatttgttcattgaccttgtctctaacactatcccaacaactcattggtgaggtg 440

            
Query: 552 t 552
           |
Sbjct: 441 t 441
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>gb|DQ429690.1| Sorghum bicolor voucher NSL92371 locus pSB1307 genomic sequence
          Length = 802

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                  
Query: 389 tacctnaatgattggtggggaaaagaaaccaaacatttcaagcccatttacagaa 443
           ||||| ||||||| ||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 278 tacctgaatgatttgtggggacaagaacccaaacatttcaagcccatttacagaa 332



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 492 ttttttatttcttcattcaccctgtctctcacactatcccaacattgcattggtgaagtg 551
           |||| ||||| |||||| ||| ||||||| ||||||||||||||   ||||||||| |||
Sbjct: 381 ttttctatttgttcattgaccttgtctctaacactatcccaacaactcattggtgaggtg 440

            
Query: 552 t 552
           |
Sbjct: 441 t 441
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>gb|DQ429689.1| Sorghum bicolor voucher NSL87902 locus pSB1307 genomic sequence
          Length = 802

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                  
Query: 389 tacctnaatgattggtggggaaaagaaaccaaacatttcaagcccatttacagaa 443
           ||||| ||||||| ||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 278 tacctgaatgatttgtggggacaagaacccaaacatttcaagcccatttacagaa 332



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 492 ttttttatttcttcattcaccctgtctctcacactatcccaacattgcattggtgaagtg 551
           |||| ||||| |||||| ||| ||||||| ||||||||||||||   ||||||||| |||
Sbjct: 381 ttttctatttgttcattgaccttgtctctaacactatcccaacaactcattggtgaggtg 440

            
Query: 552 t 552
           |
Sbjct: 441 t 441
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>gb|DQ429688.1| Sorghum bicolor voucher NSL87666 locus pSB1307 genomic sequence
          Length = 802

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                  
Query: 389 tacctnaatgattggtggggaaaagaaaccaaacatttcaagcccatttacagaa 443
           ||||| ||||||| ||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 278 tacctgaatgatttgtggggacaagaacccaaacatttcaagcccatttacagaa 332



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 492 ttttttatttcttcattcaccctgtctctcacactatcccaacattgcattggtgaagtg 551
           |||| ||||| |||||| ||| ||||||| ||||||||||||||   ||||||||| |||
Sbjct: 381 ttttctatttgttcattgaccttgtctctaacactatcccaacaactcattggtgaggtg 440

            
Query: 552 t 552
           |
Sbjct: 441 t 441
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>gb|DQ429687.1| Sorghum bicolor voucher NSL77217 locus pSB1307 genomic sequence
          Length = 802

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                  
Query: 389 tacctnaatgattggtggggaaaagaaaccaaacatttcaagcccatttacagaa 443
           ||||| ||||||| ||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 278 tacctgaatgatttgtggggacaagaacccaaacatttcaagcccatttacagaa 332



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 492 ttttttatttcttcattcaccctgtctctcacactatcccaacattgcattggtgaagtg 551
           |||| ||||| |||||| ||| ||||||| ||||||||||||||   ||||||||| |||
Sbjct: 381 ttttctatttgttcattgaccttgtctctaacactatcccaacaactcattggtgaggtg 440

            
Query: 552 t 552
           |
Sbjct: 441 t 441
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>gb|DQ429686.1| Sorghum bicolor voucher NSL77034 locus pSB1307 genomic sequence
          Length = 802

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                  
Query: 389 tacctnaatgattggtggggaaaagaaaccaaacatttcaagcccatttacagaa 443
           ||||| ||||||| ||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 278 tacctgaatgatttgtggggacaagaacccaaacatttcaagcccatttacagaa 332



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 492 ttttttatttcttcattcaccctgtctctcacactatcccaacattgcattggtgaagtg 551
           |||| ||||| |||||| ||| ||||||| ||||||||||||||   ||||||||| |||
Sbjct: 381 ttttctatttgttcattgaccttgtctctaacactatcccaacaactcattggtgaggtg 440

            
Query: 552 t 552
           |
Sbjct: 441 t 441
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>gb|DQ429684.1| Sorghum bicolor voucher NSL56003 locus pSB1307 genomic sequence
          Length = 802

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                  
Query: 389 tacctnaatgattggtggggaaaagaaaccaaacatttcaagcccatttacagaa 443
           ||||| ||||||| ||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 278 tacctgaatgatttgtggggacaagaacccaaacatttcaagcccatttacagaa 332



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 492 ttttttatttcttcattcaccctgtctctcacactatcccaacattgcattggtgaagtg 551
           |||| ||||| |||||| ||| ||||||| ||||||||||||||   ||||||||| |||
Sbjct: 381 ttttctatttgttcattgaccttgtctctaacactatcccaacaactcattggtgaggtg 440

            
Query: 552 t 552
           |
Sbjct: 441 t 441
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>gb|DQ429682.1| Sorghum bicolor voucher NSL51365 locus pSB1307 genomic sequence
          Length = 802

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                  
Query: 389 tacctnaatgattggtggggaaaagaaaccaaacatttcaagcccatttacagaa 443
           ||||| ||||||| ||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 278 tacctgaatgatttgtggggacaagaacccaaacatttcaagcccatttacagaa 332



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 492 ttttttatttcttcattcaccctgtctctcacactatcccaacattgcattggtgaagtg 551
           |||| ||||| |||||| ||| ||||||| ||||||||||||||   ||||||||| |||
Sbjct: 381 ttttctatttgttcattgaccttgtctctaacactatcccaacaactcattggtgaggtg 440

            
Query: 552 t 552
           |
Sbjct: 441 t 441
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>gb|DQ429681.1| Sorghum bicolor voucher NSL51030 locus pSB1307 genomic sequence
          Length = 802

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                  
Query: 389 tacctnaatgattggtggggaaaagaaaccaaacatttcaagcccatttacagaa 443
           ||||| ||||||| ||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 278 tacctgaatgatttgtggggacaagaacccaaacatttcaagcccatttacagaa 332



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 492 ttttttatttcttcattcaccctgtctctcacactatcccaacattgcattggtgaagtg 551
           |||| ||||| |||||| ||| ||||||| ||||||||||||||   ||||||||| |||
Sbjct: 381 ttttctatttgttcattgaccttgtctctaacactatcccaacaactcattggtgaggtg 440

            
Query: 552 t 552
           |
Sbjct: 441 t 441
to top
>gb|DQ429685.1| Sorghum bicolor voucher NSL56174 locus pSB1307 genomic sequence
          Length = 802

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                  
Query: 389 tacctnaatgattggtggggaaaagaaaccaaacatttcaagcccatttacagaa 443
           ||||| ||||||| ||||||| ||||| ||||||||||||| |||||||||||||
Sbjct: 278 tacctgaatgatttgtggggacaagaacccaaacatttcaaacccatttacagaa 332



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 492 ttttttatttcttcattcaccctgtctctcacactatcccaacattgcattggtgaagtg 551
           |||| ||||| |||||| ||| ||||||| ||||||||||||||   ||||||||| |||
Sbjct: 381 ttttctatttgttcattgaccttgtctctaacactatcccaacaactcattggtgaggtg 440

            
Query: 552 t 552
           |
Sbjct: 441 t 441
to top
>gb|DQ429683.1| Sorghum bicolor voucher NSL55243 locus pSB1307 genomic sequence
          Length = 802

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                  
Query: 389 tacctnaatgattggtggggaaaagaaaccaaacatttcaagcccatttacagaa 443
           ||||| || |||| ||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 278 tacctgaaagatttgtggggacaagaacccaaacatttcaagcccatttacagaa 332



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 492 ttttttatttcttcattcaccctgtctctcacactatcccaacattgcattggtgaagtg 551
           |||| ||||| |||||| ||| ||||||| ||||||||||||||   ||||||||| |||
Sbjct: 381 ttttctatttgttcattgaccttgtctctaacactatcccaacaactcattggtgaggtg 440

            
Query: 552 t 552
           |
Sbjct: 441 t 441
to top
>gb|DQ429680.1| Sorghum bicolor voucher NSL50875 locus pSB1307 genomic sequence
          Length = 802

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                  
Query: 389 tacctnaatgattggtggggaaaagaaaccaaacatttcaagcccatttacagaa 443
           ||||| || |||| ||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 278 tacctgaaagatttgtggggacaagaacccaaacatttcaagcccatttacagaa 332



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 492 ttttttatttcttcattcaccctgtctctcacactatcccaacattgcattggtgaagtg 551
           |||| ||||| |||||| ||| ||||||| ||||||||||||||   ||||||||| |||
Sbjct: 381 ttttctatttgttcattgaccttgtctctaacactatcccaacaactcattggtgaggtg 440

            
Query: 552 t 552
           |
Sbjct: 441 t 441
to top
>ref|NM_001036604.1| Arabidopsis thaliana unknown protein AT4G20400 transcript variant
            AT4G20400.2 mRNA, complete cds
          Length = 3026

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 417  ccaaacatttcaagcccattta 438
            ||||||||||||||||||||||
Sbjct: 2438 ccaaacatttcaagcccattta 2417
to top
>ref|NM_118159.2| Arabidopsis thaliana transcription factor AT4G20400 transcript
            variant AT4G20400.1 mRNA, complete cds
          Length = 3319

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 417  ccaaacatttcaagcccattta 438
            ||||||||||||||||||||||
Sbjct: 2749 ccaaacatttcaagcccattta 2728
to top
>gb|BT010548.1| Arabidopsis thaliana At4g20400 gene, complete cds
          Length = 2865

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 417  ccaaacatttcaagcccattta 438
            ||||||||||||||||||||||
Sbjct: 2549 ccaaacatttcaagcccattta 2528
to top
>emb|AL161553.2|ATCHRIV53 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 53
          Length = 197568

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 417   ccaaacatttcaagcccattta 438
             ||||||||||||||||||||||
Sbjct: 17196 ccaaacatttcaagcccattta 17175
to top
>emb|AL080253.2|ATF9F13 Arabidopsis thaliana DNA chromosome 4, BAC clone F9F13 (ESSA project)
          Length = 109936

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 417   ccaaacatttcaagcccattta 438
             ||||||||||||||||||||||
Sbjct: 31649 ccaaacatttcaagcccattta 31628
to top
>gb|AC010985.8| Homo sapiens BAC clone RP11-521O14 from 2, complete sequence
          Length = 196020

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 403   gtggggaaaagaaaccaaacat 424
             ||||||||||||||||||||||
Sbjct: 55546 gtggggaaaagaaaccaaacat 55567
to top
>gb|BT002486.1| Arabidopsis thaliana putative protein (At4g20400) mRNA, complete cds
          Length = 3319

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 417  ccaaacatttcaagcccattta 438
            ||||||||||||||||||||||
Sbjct: 2749 ccaaacatttcaagcccattta 2728
to top
>gb|AC135427.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617H07,
             complete sequence
          Length = 114135

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 399   attggtggggaaaagaaaccaaacatttcaagcccat 435
             |||||||| || || ||||||||||||||||| ||||
Sbjct: 70734 attggtggtgataataaaccaaacatttcaagaccat 70698
to top
>ref|XM_476089.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3717

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 399  attggtggggaaaagaaaccaaacatttcaagcccat 435
            |||||||| || || ||||||||||||||||| ||||
Sbjct: 3446 attggtggtgataataaaccaaacatttcaagaccat 3410
to top
>gb|AC132493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636E04,
            complete sequence
          Length = 141171

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 399  attggtggggaaaagaaaccaaacatttcaagcccat 435
            |||||||| || || ||||||||||||||||| ||||
Sbjct: 1544 attggtggtgataataaaccaaacatttcaagaccat 1508
to top
>gb|AC073136.6| Homo sapiens BAC clone RP11-700P18 from 7, complete sequence
          Length = 80796

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 485   atgttgcttttttatttcttc 505
             |||||||||||||||||||||
Sbjct: 42784 atgttgcttttttatttcttc 42764
to top
>gb|AC104042.5| Homo sapiens chromosome 11, clone CTD-2119L1, complete sequence
          Length = 109477

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 483   ttatgttgcttttttatttct 503
             |||||||||||||||||||||
Sbjct: 20441 ttatgttgcttttttatttct 20421
to top
>gb|AC148939.8| Pan troglodytes BAC clone CH251-51M11 from chromosome 7, complete
             sequence
          Length = 183313

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 485   atgttgcttttttatttcttc 505
             |||||||||||||||||||||
Sbjct: 22982 atgttgcttttttatttcttc 22962
to top
>gb|AC079073.7| Homo sapiens chromosome 11, clone RP11-72A10, complete sequence
          Length = 173119

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 483   ttatgttgcttttttatttct 503
             |||||||||||||||||||||
Sbjct: 24611 ttatgttgcttttttatttct 24631
to top
>gb|AC150749.3| Pan troglodytes BAC clone CH251-553P23 from chromosome 7, complete
              sequence
          Length = 237211

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 485    atgttgcttttttatttcttc 505
              |||||||||||||||||||||
Sbjct: 152866 atgttgcttttttatttcttc 152886
to top
>dbj|AK121381.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127H13, full
            insert sequence
          Length = 4316

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 399  attggtggggaaaagaaaccaaacatttcaagcccat 435
            |||||||| || || ||||||||||||||||| ||||
Sbjct: 3645 attggtggtgataataaaccaaacatttcaagaccat 3609
to top
>dbj|AP001880.4| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-3110P2, complete
             sequences
          Length = 169776

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 493   tttttatttcttcattcaccc 513
             |||||||||||||||||||||
Sbjct: 79254 tttttatttcttcattcaccc 79274
to top
>gb|AC183535.3| Pan troglodytes BAC clone CH251-511O21 from chromosome 15, complete
             sequence
          Length = 165704

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 487   gttgcttttttatttcttca 506
             ||||||||||||||||||||
Sbjct: 13396 gttgcttttttatttcttca 13377
to top
>ref|XM_980077.1| PREDICTED: Mus musculus storkhead box 1 (Stox1), mRNA
          Length = 3510

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 296  catcaaagactccggaagga 315
            ||||||||||||||||||||
Sbjct: 1681 catcaaagactccggaagga 1662
to top
>ref|XM_905594.2| PREDICTED: Mus musculus storkhead box 1 (Stox1), mRNA
          Length = 3204

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 296  catcaaagactccggaagga 315
            ||||||||||||||||||||
Sbjct: 1375 catcaaagactccggaagga 1356
to top
>ref|XM_125685.5| PREDICTED: Mus musculus storkhead box 1 (Stox1), mRNA
          Length = 3510

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 296  catcaaagactccggaagga 315
            ||||||||||||||||||||
Sbjct: 1681 catcaaagactccggaagga 1662
to top
>gb|AC122539.4| Mus musculus BAC clone RP24-550H10 from chromosome 10, complete
             sequence
          Length = 146242

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   catcaaagactccggaagga 315
             ||||||||||||||||||||
Sbjct: 11280 catcaaagactccggaagga 11299
to top
>gb|AC124725.3| Mus musculus BAC clone RP23-459F16 from chromosome 2, complete sequence
          Length = 168983

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 482   cttatgttgcttttttattt 501
             ||||||||||||||||||||
Sbjct: 82110 cttatgttgcttttttattt 82129
to top
>emb|AL157815.12| Human DNA sequence from clone RP11-306O1 on chromosome 13q22.1-32.1
             Contains a novel gene, complete sequence
          Length = 166122

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 488   ttgcttttttatttcttcattcac 511
             ||||| ||||||||||||||||||
Sbjct: 15508 ttgctattttatttcttcattcac 15531
to top
>emb|AL031745.8|PFMAL1P2 Plasmodium falciparum DNA from MAL1P2
          Length = 384550

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 491   cttttttatttcttcattca 510
             ||||||||||||||||||||
Sbjct: 93680 cttttttatttcttcattca 93661
to top
>dbj|AK124731.1| Homo sapiens cDNA FLJ42741 fis, clone BRAWH2016702
          Length = 2543

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 502 cttcattcaccctgtctctc 521
           ||||||||||||||||||||
Sbjct: 625 cttcattcaccctgtctctc 606
to top
>gb|AC141420.11| Pan troglodytes clone rp43-149n17, complete sequence
          Length = 167816

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 482  cttatgttgcttttttatttcttc 505
            ||||||||| ||||||||||||||
Sbjct: 4846 cttatgttgattttttatttcttc 4823
to top
>gb|AC010242.7| Homo sapiens chromosome 5 clone CTC-359E10, complete sequence
          Length = 174293

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 493   tttttatttcttcattcacc 512
             ||||||||||||||||||||
Sbjct: 93205 tttttatttcttcattcacc 93224
to top
>gb|AC090142.3| Homo sapiens chromosome 8, clone RP11-200A13, complete sequence
          Length = 197877

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 152   tttagctttcttaaggagcc 171
             ||||||||||||||||||||
Sbjct: 15778 tttagctttcttaaggagcc 15759
to top
>gb|AC093860.3| Homo sapiens BAC clone RP11-538D9 from 4, complete sequence
          Length = 191446

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 499  tttcttcattcaccctgtct 518
            ||||||||||||||||||||
Sbjct: 3534 tttcttcattcaccctgtct 3515
to top
>gb|AC091435.3| Homo sapiens chromosome 5 clone RP11-122C5, complete sequence
          Length = 145887

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 477    ccagccttatgttgcttttttatttcttcatt 508
              |||||| | ||| |||||||||||||||||||
Sbjct: 128273 ccagccatctgtagcttttttatttcttcatt 128242
to top
>gb|AC018868.4| Homo sapiens BAC clone RP11-83J16 from 15, complete sequence
          Length = 162100

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 477   ccagccttatgttgcttttt 496
             ||||||||||||||||||||
Sbjct: 74812 ccagccttatgttgcttttt 74793
to top
>gb|AC008816.8| Homo sapiens chromosome 5 clone CTD-2122K17, complete sequence
          Length = 174293

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 493   tttttatttcttcattcacc 512
             ||||||||||||||||||||
Sbjct: 93205 tttttatttcttcattcacc 93224
to top
>dbj|AK133671.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length
           enriched library, clone:5330434O09 product:hypothetical
           protein, full insert sequence
          Length = 2050

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 catcaaagactccggaagga 315
           ||||||||||||||||||||
Sbjct: 240 catcaaagactccggaagga 221
to top
>gb|AC026713.5| Homo sapiens chromosome 5 clone CTD-2127H9, complete sequence
          Length = 132638

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 477    ccagccttatgttgcttttttatttcttcatt 508
              |||||| | ||| |||||||||||||||||||
Sbjct: 127096 ccagccatctgtagcttttttatttcttcatt 127127
to top
>gb|AC142245.14| Mus musculus chromosome 15, clone RP23-82J20, complete sequence
          Length = 242954

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 134    ttcttgttcttctgggcatt 153
              ||||||||||||||||||||
Sbjct: 219174 ttcttgttcttctgggcatt 219193
to top
>dbj|AK028920.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
            library, clone:4732470K04 product:weakly similar to CDNA
            FLJ25135 FIS, CLONE CBR06974 [Homo sapiens], full insert
            sequence
          Length = 3101

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 296  catcaaagactccggaagga 315
            ||||||||||||||||||||
Sbjct: 1419 catcaaagactccggaagga 1400
to top
>gb|AC021546.7|AC021546 Homo sapiens chromosome 8, clone RP11-574O7, complete sequence
          Length = 207756

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    tttagctttcttaaggagcc 171
              ||||||||||||||||||||
Sbjct: 136479 tttagctttcttaaggagcc 136460
to top
>gb|AC017093.3|AC017093 Homo sapiens BAC clone RP11-511G7 from 5, complete sequence
          Length = 203043

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 493    tttttatttcttcattcacc 512
              ||||||||||||||||||||
Sbjct: 155553 tttttatttcttcattcacc 155572
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 514      tgtctctcacactatcccaa 533
                ||||||||||||||||||||
Sbjct: 16238382 tgtctctcacactatcccaa 16238401
to top
>gb|AC020941.5| Homo sapiens chromosome 5 clone CTD-2312I9, complete sequence
          Length = 171317

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 493    tttttatttcttcattcacc 512
              ||||||||||||||||||||
Sbjct: 134153 tttttatttcttcattcacc 134134
to top
>emb|BX296556.4| Zebrafish DNA sequence from clone CH211-234E14 in linkage group 2,
             complete sequence
          Length = 181230

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 485   atgttgcttttttatttctt 504
             ||||||||||||||||||||
Sbjct: 85873 atgttgcttttttatttctt 85854
to top
>dbj|BS000245.1| Pan troglodytes chromosome 22 clone:PTB-059I14, map 22, complete
             sequences
          Length = 201304

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 502   cttcattcaccctgtctctc 521
             ||||||||||||||||||||
Sbjct: 79059 cttcattcaccctgtctctc 79040
to top
>dbj|BS000244.1| Pan troglodytes chromosome 22 clone:PTB-070F15, map 22, complete
              sequences
          Length = 155086

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 502    cttcattcaccctgtctctc 521
              ||||||||||||||||||||
Sbjct: 125807 cttcattcaccctgtctctc 125788
to top
>emb|BX927078.22| Zebrafish DNA sequence from clone CH211-284J7 in linkage group 3,
              complete sequence
          Length = 149711

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 419    aaacatttcaagcccattta 438
              ||||||||||||||||||||
Sbjct: 147988 aaacatttcaagcccattta 147969
to top
>dbj|AP001760.1| Homo sapiens genomic DNA, chromosome 21q, section 104/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 502    cttcattcaccctgtctctc 521
              ||||||||||||||||||||
Sbjct: 232262 cttcattcaccctgtctctc 232243
to top
>dbj|AP000338.3| Homo sapiens genomic DNA, chromosome 21q, clone:CMP21-1D4, complete
             sequence
          Length = 82117

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 502   cttcattcaccctgtctctc 521
             ||||||||||||||||||||
Sbjct: 57686 cttcattcaccctgtctctc 57667
to top
>emb|BX294446.6| Mouse DNA sequence from clone RP23-459F16 on chromosome 2, complete
             sequence
          Length = 73907

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 482   cttatgttgcttttttattt 501
             ||||||||||||||||||||
Sbjct: 16127 cttatgttgcttttttattt 16108
to top
>emb|AL606729.3|OSJN00107 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0062B06,
             complete sequence
          Length = 187154

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 514   tgtctctcacactatcccaa 533
             ||||||||||||||||||||
Sbjct: 83297 tgtctctcacactatcccaa 83316
to top
>dbj|AP000216.1| Homo sapiens genomic DNA, chromosome 21q22.3-ter, Ter region, clone
             f27E1-T1136, segment 2/4, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 502   cttcattcaccctgtctctc 521
             ||||||||||||||||||||
Sbjct: 72803 cttcattcaccctgtctctc 72784


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,097,730
Number of Sequences: 3902068
Number of extensions: 4097730
Number of successful extensions: 89242
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89054
Number of HSP's gapped (non-prelim): 188
length of query: 558
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 535
effective length of database: 17,143,297,704
effective search space: 9171664271640
effective search space used: 9171664271640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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