Clone Information

BLAST Search Result

Clone Name	rbasd25o19
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RS19_ORYSA (P40978) 40S ribosomal protein S19	251	7e-67
2	RS193_ARATH (Q9FNP8) 40S ribosomal protein S19-3	208	7e-54
3	RS192_ARATH (Q9LF30) 40S ribosomal protein S19-2	206	3e-53
4	RS191_ARATH (Q9SGA6) 40S ribosomal protein S19-1	204	1e-52
5	RS19_MYAAR (Q94613) 40S ribosomal protein S19	170	3e-42
6	RS19_MYXGL (Q9Y0H3) 40S ribosomal protein S19	156	4e-38
7	RS19_BRABE (Q8T5Z4) 40S ribosomal protein S19	155	7e-38
8	RS19_RAT (P17074) 40S ribosomal protein S19	155	9e-38
9	RS19_MOUSE (Q9CZX8) 40S ribosomal protein S19	155	9e-38
10	RS19_GILMI (Q9DFR5) 40S ribosomal protein S19	154	2e-37
11	RS19_PONPY (Q5R8M9) 40S ribosomal protein S19	152	5e-37
12	RS19_HUMAN (P39019) 40S ribosomal protein S19	152	5e-37
13	RS19_ICTPU (Q90YQ4) 40S ribosomal protein S19	152	5e-37
14	RS19_AEQIR (Q8ITC3) 40S ribosomal protein S19	150	2e-36
15	RS19_PIG (Q29308) 40S ribosomal protein S19 (Fragment)	149	5e-36
16	RS19_EMENI (P27073) 40S ribosomal protein S19 (S16)	149	5e-36
17	RS19_PAGMA (P61155) 40S ribosomal protein S19	148	9e-36
18	RS19B_SCHPO (P79016) 40S ribosomal protein S19-B (S16-B)	147	3e-35
19	RS19A_SCHPO (P58234) 40S ribosomal protein S19-A (S16-A)	146	4e-35
20	RS19B_YEAST (P07281) 40S ribosomal protein S19-B (S16B) (YS16) (...	137	2e-32
21	RS19A_YEAST (P07280) 40S ribosomal protein S19-A (S16A) (YS16) (...	137	2e-32
22	RS19A_DROME (P39018) 40S ribosomal protein S19a	135	8e-32
23	RS19S_ASCSU (P39698) 40S ribosomal protein S19S	134	2e-31
24	RS19_ENTHI (O15631) 40S ribosomal protein S19	132	7e-31
25	RS19B_DROME (Q7KS38) 40S ribosomal protein S19b	126	5e-29
26	RS19_CAEEL (O18650) 40S ribosomal protein S19	124	1e-28
27	RS19G_ASCSU (P24494) 40S ribosomal protein S19G (Eliminated prot...	124	2e-28
28	RS19E_METJA (P54057) 30S ribosomal protein S19e	107	2e-23
29	RS19E_METTH (O27653) 30S ribosomal protein S19e	105	9e-23
30	RS19E_AERPE (Q9YD22) 30S ribosomal protein S19e	104	1e-22
31	RS19E_ARCFU (O28210) 30S ribosomal protein S19e	102	6e-22
32	RS19E_PYRHO (O59041) 30S ribosomal protein S19e	100	3e-21
33	RS19E_THEVO (Q97CU4) 30S ribosomal protein S19e	86	7e-17
34	RS19E_HALMA (P19952) 30S ribosomal protein S19e (HS12) (E1.3)	82	1e-15
35	RS19E_THEAC (Q9HM21) 30S ribosomal protein S19e	82	1e-15
36	LCE1A_HUMAN (Q5T7P2) Late cornified envelope protein 1A (Late en...	32	1.6
37	ATBF1_HUMAN (Q15911) Alpha-fetoprotein enhancer-binding protein ...	31	2.1
38	TRPF_SACKU (Q5XQP9) N-(5'-phosphoribosyl)anthranilate isomerase ...	31	2.7
39	STP2_CANFA (O77645) Nuclear transition protein 2 (TP-2) (TP2)	31	2.7
40	LCE1C_HUMAN (Q5T751) Late cornified envelope protein 1C (Late en...	30	3.5
41	LCE1B_HUMAN (Q5T7P3) Late cornified envelope protein 1B (Late en...	30	3.5
42	LCE1F_HUMAN (Q5T754) Late cornified envelope protein 1F (Late en...	30	4.6
43	HMD_METVO (Q50840) 5,10-methenyltetrahydromethanopterin hydrogen...	30	4.6
44	DDL_MYCSM (Q9ZGN0) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-a...	29	7.9
45	PPGK_MYCLE (Q49988) Polyphosphate glucokinase (EC 2.7.1.63) (Pol...	29	7.9
46	CUTL1_CANFA (P39881) Homeobox protein cut-like 1 (CCAAT displace...	29	7.9
47	YDHC_BACSU (O05494) Hypothetical transcriptional regulator ydhC	29	7.9
48	GAL1_PYRKO (Q5JEK8) Galactokinase (EC 2.7.1.6) (Galactose kinase)	29	7.9
49	RPOC_SYMTH (Q67JT4) DNA-directed RNA polymerase beta' chain (EC ...	29	7.9
50	LCE1E_HUMAN (Q5T753) Late cornified envelope protein 1E (Late en...	29	7.9
51	GRIN1_MOUSE (Q3UNH4) G protein-regulated inducer of neurite outg...	29	7.9

>RS19_ORYSA (P40978) 40S ribosomal protein S19|
          Length = 146

 Score =  251 bits (642), Expect = 7e-67
 Identities = 120/128 (93%), Positives = 124/128 (96%)
 Frame = -2

Query: 554 PHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGI 375
           PHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPP D DWYY RAAS+ARKIYLRQGI
Sbjct: 14  PHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKIYLRQGI 73

Query: 374 GIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRD 195
           G+GGFQKIYGGRQRNGSRPPHFCKSSGA+SRNILQ+LQKMGIIDVDPKGGRLITSQGRRD
Sbjct: 74  GVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRD 133

Query: 194 LDQVAGTV 171
           LDQVAG V
Sbjct: 134 LDQVAGRV 141

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>RS193_ARATH (Q9FNP8) 40S ribosomal protein S19-3|
          Length = 143

 Score =  208 bits (530), Expect = 7e-54
 Identities = 96/130 (73%), Positives = 112/130 (86%)
 Frame = -2

Query: 554 PHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGI 375
           PHEFVKAY+AHLKRSGK+ELP W DIVKT + KEL P D DWYYIRAASMARK+YLR G+
Sbjct: 12  PHEFVKAYAAHLKRSGKIELPLWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGL 71

Query: 374 GIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRD 195
           G+G F++IYGG +RNGSRPPHFCKSSG V+R+ILQ+LQ M I+D+D KGGR ITS G+RD
Sbjct: 72  GVGAFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMNIVDLDTKGGRKITSSGQRD 131

Query: 194 LDQVAGTVPA 165
           LDQVAG + A
Sbjct: 132 LDQVAGRIAA 141

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>RS192_ARATH (Q9LF30) 40S ribosomal protein S19-2|
          Length = 143

 Score =  206 bits (525), Expect = 3e-53
 Identities = 94/131 (71%), Positives = 113/131 (86%)
 Frame = -2

Query: 554 PHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGI 375
           PH+FVKAY++HLKRSGK+ELP W DIVKT R KEL P D DWYYIRAASMARKIYLR G+
Sbjct: 12  PHDFVKAYASHLKRSGKIELPLWTDIVKTGRLKELAPYDPDWYYIRAASMARKIYLRGGL 71

Query: 374 GIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRD 195
           G+G F++IYGG +RNGSRPPHFCKSSG ++R+ILQ+L+ M I+++D KGGR ITS G+RD
Sbjct: 72  GVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMSIVELDTKGGRRITSSGQRD 131

Query: 194 LDQVAGTVPAE 162
           LDQVAG + AE
Sbjct: 132 LDQVAGRIAAE 142

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>RS191_ARATH (Q9SGA6) 40S ribosomal protein S19-1|
          Length = 143

 Score =  204 bits (519), Expect = 1e-52
 Identities = 91/131 (69%), Positives = 112/131 (85%)
 Frame = -2

Query: 554 PHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGI 375
           PH+FVKAY++HLKRSGK+ELP W DIVKT + KEL P D DWYYIRAASMARK+YLR G+
Sbjct: 12  PHDFVKAYASHLKRSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGL 71

Query: 374 GIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRD 195
           G+G F++IYGG +RNGSRPPHFCKSSG ++R+ILQ+L+ M I+++D KGGR ITS G+RD
Sbjct: 72  GVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKGGRRITSSGQRD 131

Query: 194 LDQVAGTVPAE 162
           LDQVAG +  E
Sbjct: 132 LDQVAGRIAVE 142

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>RS19_MYAAR (Q94613) 40S ribosomal protein S19|
          Length = 149

 Score =  170 bits (430), Expect = 3e-42
 Identities = 73/127 (57%), Positives = 100/127 (78%)
 Frame = -2

Query: 551 HEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIG 372
           HEF +A++A LK+SGKM++PEW D VKT  FKEL P + DWY+IRAAS+ R +Y+R   G
Sbjct: 11  HEFTRAFAAFLKKSGKMKVPEWTDFVKTGMFKELSPYEPDWYFIRAASICRHLYIRSPAG 70

Query: 371 IGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDL 192
           IG F+KIYGGR+R G+ P HFCK++G++SR +LQ L+ + I++ DP GGR +TSQGRRDL
Sbjct: 71  IGSFEKIYGGRRRRGTAPSHFCKANGSISRRLLQSLEGLKIVEKDPNGGRRLTSQGRRDL 130

Query: 191 DQVAGTV 171
           D++A  +
Sbjct: 131 DRIAAQI 137

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>RS19_MYXGL (Q9Y0H3) 40S ribosomal protein S19|
          Length = 145

 Score =  156 bits (394), Expect = 4e-38
 Identities = 69/126 (54%), Positives = 95/126 (75%)
 Frame = -2

Query: 548 EFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGI 369
           EFVKA +A  K+SGK++ P+WVD VK  + KEL P D DWYYIR AS+AR +Y+R G+G+
Sbjct: 13  EFVKALAAFFKKSGKLKKPDWVDTVKLGKHKELAPFDIDWYYIRTASVARHLYMRGGVGV 72

Query: 368 GGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLD 189
           G   KIYGGRQRNG+RP H+ + S  V+R +LQ L+ + +++ DP GGR +TS G+RD+D
Sbjct: 73  GAMTKIYGGRQRNGTRPSHYSRGSRNVARKVLQSLEMLKMVEKDPNGGRRLTSIGQRDMD 132

Query: 188 QVAGTV 171
           ++AG V
Sbjct: 133 RIAGQV 138

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>RS19_BRABE (Q8T5Z4) 40S ribosomal protein S19|
          Length = 147

 Score =  155 bits (392), Expect = 7e-38
 Identities = 72/126 (57%), Positives = 97/126 (76%)
 Frame = -2

Query: 548 EFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGI 369
           EFVKA++A LK+SGK++LPEWVD+VKTA  KEL P D DW+Y+RAAS AR +Y+R G+G+
Sbjct: 14  EFVKAFAAFLKKSGKLKLPEWVDLVKTAPHKELAPYDPDWFYLRAASTARHLYMRGGVGV 73

Query: 368 GGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLD 189
           G   KIYGGR+R G++P  F   S  VSR +LQ L+ + +++ D  GGR +TSQG+RDLD
Sbjct: 74  GAMCKIYGGRKRRGTKPAKFRVCSRGVSRTVLQSLEGIKMVEKDAAGGRRLTSQGQRDLD 133

Query: 188 QVAGTV 171
           ++AG V
Sbjct: 134 RIAGQV 139

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>RS19_RAT (P17074) 40S ribosomal protein S19|
          Length = 144

 Score =  155 bits (391), Expect = 9e-38
 Identities = 72/128 (56%), Positives = 96/128 (75%)
 Frame = -2

Query: 548 EFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGI 369
           EFV+A +A LK+SGK+++PEWVD VK A+ KEL P D +W+Y RAAS AR +YLR G G+
Sbjct: 12  EFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGV 71

Query: 368 GGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLD 189
           G   KIYGGRQRNG RP HF + S +V+R +LQ L+ + +++ D  GGR +T QG+RDLD
Sbjct: 72  GSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLD 131

Query: 188 QVAGTVPA 165
           ++AG V A
Sbjct: 132 RIAGQVAA 139

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>RS19_MOUSE (Q9CZX8) 40S ribosomal protein S19|
          Length = 144

 Score =  155 bits (391), Expect = 9e-38
 Identities = 72/128 (56%), Positives = 96/128 (75%)
 Frame = -2

Query: 548 EFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGI 369
           EFV+A +A LK+SGK+++PEWVD VK A+ KEL P D +W+Y RAAS AR +YLR G G+
Sbjct: 12  EFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGV 71

Query: 368 GGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLD 189
           G   KIYGGRQRNG RP HF + S +V+R +LQ L+ + +++ D  GGR +T QG+RDLD
Sbjct: 72  GSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLD 131

Query: 188 QVAGTVPA 165
           ++AG V A
Sbjct: 132 RIAGQVAA 139

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>RS19_GILMI (Q9DFR5) 40S ribosomal protein S19|
          Length = 147

 Score =  154 bits (389), Expect = 2e-37
 Identities = 71/128 (55%), Positives = 96/128 (75%)
 Frame = -2

Query: 548 EFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGI 369
           EFV+A +A LK+SGK+++P+WVD+VK  R KEL P+D +W+YIRAAS  R +YLR G G+
Sbjct: 13  EFVRALAAFLKKSGKLKVPDWVDLVKLGRHKELAPSDENWFYIRAASTVRHLYLRGGAGV 72

Query: 368 GGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLD 189
           G   KIYGGRQRNG  P H+ + S  V+R +LQ L+ + +I+ DP GGR +T+QG RDLD
Sbjct: 73  GSMTKIYGGRQRNGVCPAHYSEGSKNVARKVLQALELLKMIEKDPNGGRRLTAQGTRDLD 132

Query: 188 QVAGTVPA 165
           ++AG V A
Sbjct: 133 RIAGQVSA 140

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>RS19_PONPY (Q5R8M9) 40S ribosomal protein S19|
          Length = 144

 Score =  152 bits (385), Expect = 5e-37
 Identities = 71/128 (55%), Positives = 95/128 (74%)
 Frame = -2

Query: 548 EFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGI 369
           EFV+A +A LK+SGK+++PEWVD VK A+ KEL P D +W+Y RAAS AR +YLR G G+
Sbjct: 12  EFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGV 71

Query: 368 GGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLD 189
           G   KIYGGRQRNG  P HF + S +V+R +LQ L+ + +++ D  GGR +T QG+RDLD
Sbjct: 72  GSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLD 131

Query: 188 QVAGTVPA 165
           ++AG V A
Sbjct: 132 RIAGQVAA 139

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>RS19_HUMAN (P39019) 40S ribosomal protein S19|
          Length = 144

 Score =  152 bits (385), Expect = 5e-37
 Identities = 71/128 (55%), Positives = 95/128 (74%)
 Frame = -2

Query: 548 EFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGI 369
           EFV+A +A LK+SGK+++PEWVD VK A+ KEL P D +W+Y RAAS AR +YLR G G+
Sbjct: 12  EFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGV 71

Query: 368 GGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLD 189
           G   KIYGGRQRNG  P HF + S +V+R +LQ L+ + +++ D  GGR +T QG+RDLD
Sbjct: 72  GSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLD 131

Query: 188 QVAGTVPA 165
           ++AG V A
Sbjct: 132 RIAGQVAA 139

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>RS19_ICTPU (Q90YQ4) 40S ribosomal protein S19|
          Length = 147

 Score =  152 bits (385), Expect = 5e-37
 Identities = 71/128 (55%), Positives = 95/128 (74%)
 Frame = -2

Query: 548 EFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGI 369
           EFV+A +A LK+SGK+++P+WVDIVK A+ KEL P D +W+YIRAAS  R +YLR G+G+
Sbjct: 15  EFVRALAAFLKKSGKLKVPDWVDIVKLAKHKELAPCDDNWFYIRAASTVRHLYLRGGVGV 74

Query: 368 GGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLD 189
           G   KIYGGR+RNG  P HF   S  V+R +LQ L+ + +++ DP GGR +T QG RDLD
Sbjct: 75  GSMIKIYGGRKRNGVCPSHFSVGSKNVARKVLQALEALKMVEKDPNGGRRLTPQGTRDLD 134

Query: 188 QVAGTVPA 165
           ++AG V A
Sbjct: 135 RIAGQVAA 142

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>RS19_AEQIR (Q8ITC3) 40S ribosomal protein S19|
          Length = 144

 Score =  150 bits (380), Expect = 2e-36
 Identities = 65/127 (51%), Positives = 93/127 (73%)
 Frame = -2

Query: 551 HEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIG 372
           H F KA +A LK+SGKM++PEW  I+K ++F EL P D DW+Y RAAS+ R +Y+R   G
Sbjct: 11  HTFTKALAAFLKKSGKMKIPEWATIIKLSKFNELSPYDEDWFYTRAASICRHLYIRSPAG 70

Query: 371 IGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDL 192
           +G   KIYG R+RNG+ P H+C+SSG+V+R +LQ L+   +++ D  GGR +TSQG++DL
Sbjct: 71  VGALTKIYGDRKRNGTVPSHYCRSSGSVARRVLQALETQKLVEKDANGGRKLTSQGQKDL 130

Query: 191 DQVAGTV 171
           D++A  V
Sbjct: 131 DRIAAQV 137

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>RS19_PIG (Q29308) 40S ribosomal protein S19 (Fragment)|
          Length = 135

 Score =  149 bits (376), Expect = 5e-36
 Identities = 69/124 (55%), Positives = 92/124 (74%)
 Frame = -2

Query: 548 EFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGI 369
           EFV+A +A LK+SGK+++PEWVD VK A  KEL P D +W+Y RAAS AR +YLR G G+
Sbjct: 12  EFVRALAAFLKKSGKLKVPEWVDTVKLAXHKELAPYDENWFYTRAASTARHLYLRGGAGV 71

Query: 368 GGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLD 189
           G   KIYGGRQRNG  P HF + S +V+R +LQ L+ + +++ D  GGR +T QG+RDLD
Sbjct: 72  GSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLD 131

Query: 188 QVAG 177
           ++AG
Sbjct: 132 RIAG 135

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>RS19_EMENI (P27073) 40S ribosomal protein S19 (S16)|
          Length = 148

 Score =  149 bits (376), Expect = 5e-36
 Identities = 69/130 (53%), Positives = 95/130 (73%), Gaps = 1/130 (0%)
 Frame = -2

Query: 548 EFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGI 369
           +F+ AY+A LKR GK+ +P WVD VKT+   ELPP DADWYY+RAA++AR IYLR+ +G+
Sbjct: 13  KFIVAYAAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWYYVRAAAVARHIYLRKTVGV 72

Query: 368 GGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVD-PKGGRLITSQGRRDL 192
           G  +K++G  +  GSRP H   +SGAV R +LQ L+K+G+++ D  KGGR IT  G+RDL
Sbjct: 73  GRLRKVHGSTKNRGSRPAHHVDASGAVDRKVLQSLEKIGVLEQDEEKGGRRITQSGQRDL 132

Query: 191 DQVAGTVPAE 162
           D++A T   E
Sbjct: 133 DRIAKTTVDE 142

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>RS19_PAGMA (P61155) 40S ribosomal protein S19|
          Length = 146

 Score =  148 bits (374), Expect = 9e-36
 Identities = 68/128 (53%), Positives = 94/128 (73%)
 Frame = -2

Query: 548 EFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGI 369
           EFV+A +A LK+SGK+++P+WVD+VK  + KEL P+D +W+YIR+AS  R +YLR G G+
Sbjct: 13  EFVRALAAFLKKSGKLKVPDWVDLVKLGKHKELAPSDENWFYIRSASTVRHLYLRGGAGV 72

Query: 368 GGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLD 189
           G   KIYG RQRNG  P H+   S  V+R +LQ L+ + +I+ DP GGR +T+QG RDLD
Sbjct: 73  GSMTKIYGSRQRNGVCPAHYSVGSKNVARKVLQALELLKMIEKDPNGGRRLTAQGTRDLD 132

Query: 188 QVAGTVPA 165
           ++AG V A
Sbjct: 133 RIAGQVAA 140

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>RS19B_SCHPO (P79016) 40S ribosomal protein S19-B (S16-B)|
          Length = 143

 Score =  147 bits (370), Expect = 3e-35
 Identities = 65/123 (52%), Positives = 89/123 (72%)
 Frame = -2

Query: 548 EFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGI 369
           +F+ AY+A LKRSGKM  P+W+DIVKT   KEL P D DWYY+RAA++AR IYLR+ +G+
Sbjct: 13  QFINAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGV 72

Query: 368 GGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLD 189
           G   K+YGG    G RP H    SG+V R ++Q L+K+G+++    GGR I+ QG+RDLD
Sbjct: 73  GRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRDLD 132

Query: 188 QVA 180
           ++A
Sbjct: 133 RIA 135

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>RS19A_SCHPO (P58234) 40S ribosomal protein S19-A (S16-A)|
          Length = 144

 Score =  146 bits (368), Expect = 4e-35
 Identities = 65/123 (52%), Positives = 89/123 (72%)
 Frame = -2

Query: 548 EFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGI 369
           +F+ AY+A LKRSGKM  P+W+DIVKT   KEL P D DWYY+RAA++AR IYLR+ +G+
Sbjct: 13  KFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGV 72

Query: 368 GGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLD 189
           G   K+YGG    G RP H    SG+V R ++Q L+K+G+++    GGR I+ QG+RDLD
Sbjct: 73  GRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRDLD 132

Query: 188 QVA 180
           ++A
Sbjct: 133 RIA 135

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>RS19B_YEAST (P07281) 40S ribosomal protein S19-B (S16B) (YS16) (RP55)|
          Length = 143

 Score =  137 bits (345), Expect = 2e-32
 Identities = 61/124 (49%), Positives = 94/124 (75%), Gaps = 1/124 (0%)
 Frame = -2

Query: 548 EFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDAD-WYYIRAASMARKIYLRQGIG 372
           +F+ AY++ L+R GK+E+P +VDIVKT+   E+PP DA+ W+Y RAAS+AR IY+R+ +G
Sbjct: 12  DFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHIYMRKQVG 71

Query: 371 IGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDL 192
           +G   K+YGG +  G RP     +SG+++R +LQ L+K+GI+++ PKGGR I+  G+RDL
Sbjct: 72  VGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPKGGRRISENGQRDL 131

Query: 191 DQVA 180
           D++A
Sbjct: 132 DRIA 135

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>RS19A_YEAST (P07280) 40S ribosomal protein S19-A (S16A) (YS16) (RP55) (YP45)|
          Length = 143

 Score =  137 bits (345), Expect = 2e-32
 Identities = 61/124 (49%), Positives = 94/124 (75%), Gaps = 1/124 (0%)
 Frame = -2

Query: 548 EFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDAD-WYYIRAASMARKIYLRQGIG 372
           +F+ AY++ L+R GK+E+P +VDIVKT+   E+PP DA+ W+Y RAAS+AR IY+R+ +G
Sbjct: 12  DFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHIYMRKQVG 71

Query: 371 IGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDL 192
           +G   K+YGG +  G RP     +SG+++R +LQ L+K+GI+++ PKGGR I+  G+RDL
Sbjct: 72  VGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPKGGRRISENGQRDL 131

Query: 191 DQVA 180
           D++A
Sbjct: 132 DRIA 135

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>RS19A_DROME (P39018) 40S ribosomal protein S19a|
          Length = 155

 Score =  135 bits (340), Expect = 8e-32
 Identities = 59/127 (46%), Positives = 88/127 (69%)
 Frame = -2

Query: 551 HEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIG 372
           H   KA +  LK++GK+++P+ +DIVKTA+FKEL P D DW+Y+R AS+ R +Y R   G
Sbjct: 11  HAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAG 70

Query: 371 IGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDL 192
           +G   KIYGGR+RNG  P HFC+++   +R  LQ L+   +++  P GGR ++S G+RDL
Sbjct: 71  VGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDL 130

Query: 191 DQVAGTV 171
           D++A  +
Sbjct: 131 DRIANQI 137

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>RS19S_ASCSU (P39698) 40S ribosomal protein S19S|
          Length = 150

 Score =  134 bits (337), Expect = 2e-31
 Identities = 59/125 (47%), Positives = 89/125 (71%), Gaps = 1/125 (0%)
 Frame = -2

Query: 551 HEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIG 372
           HE V+  +  LK+SGK+++PEW D+VK    KEL P D+DWYY+R AS+AR++Y+R   G
Sbjct: 13  HEIVRYIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYIRSPTG 72

Query: 371 IGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKG-GRLITSQGRRD 195
           +G  +++YGG +R G  P HF ++SG+V R  LQ L+ +  ++  P G GR++T QGR+D
Sbjct: 73  VGALRRVYGGNKRRGVTPNHFARASGSVIRKALQTLEAIKWVEKHPDGNGRILTKQGRKD 132

Query: 194 LDQVA 180
           LD++A
Sbjct: 133 LDRIA 137

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>RS19_ENTHI (O15631) 40S ribosomal protein S19|
          Length = 148

 Score =  132 bits (332), Expect = 7e-31
 Identities = 62/123 (50%), Positives = 87/123 (70%)
 Frame = -2

Query: 548 EFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGI 369
           +F+KAY+ HLK+SGK+E+PEWVD VKT   KEL P + DW YIRAA++ARK+YL  GIG+
Sbjct: 14  DFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVYLNNGIGV 73

Query: 368 GGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLD 189
              ++ YG +      P H    SG V+R ILQ+L+KMGI+    + GR +T +GR+D+D
Sbjct: 74  MALRRAYGDQYNKHYYPSHRTLGSGKVNRYILQQLEKMGIVG-KIQSGRSLTKEGRKDMD 132

Query: 188 QVA 180
           ++A
Sbjct: 133 KIA 135

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>RS19B_DROME (Q7KS38) 40S ribosomal protein S19b|
          Length = 154

 Score =  126 bits (316), Expect = 5e-29
 Identities = 59/130 (45%), Positives = 83/130 (63%)
 Frame = -2

Query: 551 HEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIG 372
           H   K  +A LK+SGK+ +PE    +KT +FKE  PTD DW+Y R AS+ R +YLR   G
Sbjct: 11  HVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASIMRHLYLRSPAG 70

Query: 371 IGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDL 192
           +G F K+Y GR+RNG RP   C+SS    R  LQ L+   +++  P GGR +T QG+R+L
Sbjct: 71  VGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGGRKLTPQGQRNL 130

Query: 191 DQVAGTVPAE 162
           D++A  + A+
Sbjct: 131 DRIANKIVAK 140

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>RS19_CAEEL (O18650) 40S ribosomal protein S19|
          Length = 146

 Score =  124 bits (312), Expect = 1e-28
 Identities = 60/125 (48%), Positives = 86/125 (68%), Gaps = 1/125 (0%)
 Frame = -2

Query: 551 HEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIG 372
           HE  K+ +  LK+SGK+++PEW D+VK    KEL P D DW+Y RAAS+AR +Y R   G
Sbjct: 13  HEATKSIAHFLKKSGKVKVPEWSDLVKLGVNKELAPVDPDWFYTRAASLARHLYFRPA-G 71

Query: 371 IGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKG-GRLITSQGRRD 195
           IG F+K+YGG +R G  P HF  S+G   R  +Q+L+K+  ++  P G GR+++ QGR+D
Sbjct: 72  IGAFKKVYGGNKRRGVAPNHFQTSAGNCLRKAVQQLEKIKWVEKHPDGKGRILSKQGRKD 131

Query: 194 LDQVA 180
           LD++A
Sbjct: 132 LDRIA 136

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>RS19G_ASCSU (P24494) 40S ribosomal protein S19G (Eliminated protein NO. 1)|
          Length = 148

 Score =  124 bits (311), Expect = 2e-28
 Identities = 57/125 (45%), Positives = 85/125 (68%), Gaps = 1/125 (0%)
 Frame = -2

Query: 551 HEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIG 372
           HE V+  +  LK+SGK+++PEW D+ K    KEL P ++DWYY+R AS+AR++Y+R   G
Sbjct: 13  HEIVQHIAKFLKKSGKVKVPEWSDVTKMGISKELAPLNSDWYYVRTASIARRLYVRSPTG 72

Query: 371 IGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKG-GRLITSQGRRD 195
           +   + +YGG +R G  P HF K+SG+V R  LQ L+ +  +   P G GR++T QGR+D
Sbjct: 73  VDALRLVYGGSKRRGVVPNHFAKASGSVIRKALQTLEAIKWVQKHPDGNGRVLTKQGRKD 132

Query: 194 LDQVA 180
           LD++A
Sbjct: 133 LDRIA 137

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>RS19E_METJA (P54057) 30S ribosomal protein S19e|
          Length = 148

 Score =  107 bits (267), Expect = 2e-23
 Identities = 53/121 (43%), Positives = 77/121 (63%)
 Frame = -2

Query: 497 LPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRP 318
           +PEWVD VKT   +E  P   DW+YIR AS+ RKIY+   +G+   +  YGGR+  G  P
Sbjct: 27  VPEWVDFVKTGVSRERRPDQDDWWYIRCASILRKIYIYGPVGVSRLRTAYGGRKNRGHEP 86

Query: 317 PHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAEF*SVEVPS 138
            HF K SG + R  LQEL+K+G+++  P+ GR++T +GR  LD +A  V  E  + E+P+
Sbjct: 87  EHFYKGSGNIIRKALQELEKLGLVEKTPE-GRVVTPKGRSFLDNIAKEVRDEIIN-EIPA 144

Query: 137 M 135
           +
Sbjct: 145 L 145

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>RS19E_METTH (O27653) 30S ribosomal protein S19e|
          Length = 145

 Score =  105 bits (262), Expect = 9e-23
 Identities = 51/132 (38%), Positives = 81/132 (61%)
 Frame = -2

Query: 542 VKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGG 363
           +   +  LK   K++ PEWV+ VKT   KE  P + DW+Y+RAA++ R++Y+   +G+  
Sbjct: 13  INRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRVYIDGPVGVNS 72

Query: 362 FQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQV 183
            +  YGG++  GSRP  F + SGA+ R  LQ+L++ G+I  + + GR+IT +GR  LD+ 
Sbjct: 73  LRTHYGGKKDRGSRPEKFRRGSGAIIRRALQQLEESGLIKRE-ENGRVITPEGRSFLDKA 131

Query: 182 AGTVPAEF*SVE 147
           A  V  E   +E
Sbjct: 132 AAEVKKEVEGLE 143

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>RS19E_AERPE (Q9YD22) 30S ribosomal protein S19e|
          Length = 153

 Score =  104 bits (260), Expect = 1e-22
 Identities = 54/112 (48%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
 Frame = -2

Query: 494 PEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLR-QGIGIGGFQKIYGGRQRNGSRP 318
           P W    KT   KE PPTD DW+Y+RAAS+ RK+Y   + IGI  F+ IYGGRQ  GS P
Sbjct: 30  PAWAYFAKTGPHKERPPTDRDWWYVRAASILRKLYKSPEPIGIETFRTIYGGRQNRGSAP 89

Query: 317 PHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAE 162
            HF K+ G+V R ILQ+L++ G++   P  GR I+  GR  LD  A  +  E
Sbjct: 90  EHFRKAGGSVPRKILQQLEEAGLVVKVPGRGRTISPAGRSLLDTTAREIMEE 141

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>RS19E_ARCFU (O28210) 30S ribosomal protein S19e|
          Length = 147

 Score =  102 bits (255), Expect = 6e-22
 Identities = 51/121 (42%), Positives = 77/121 (63%)
 Frame = -2

Query: 494 PEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPP 315
           PEW   VKT   KE  P   DW+Y+R AS+ R++Y+   +GI   +  YGGR+R GS+PP
Sbjct: 27  PEWAKYVKTGVHKERSPEQDDWWYLRLASIFRRVYIDGPVGIERLRTFYGGRKRRGSKPP 86

Query: 314 HFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAEF*SVEVPSM 135
            F K SGA+ RN L +L+++G +    + GR++T  GR  LD+VA  + +E  S E+P++
Sbjct: 87  KFRKGSGAIVRNALHQLEQLGFVK-KTREGRVVTPMGRSFLDKVATELKSELVS-EIPAL 144

Query: 134 K 132
           +
Sbjct: 145 E 145

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>RS19E_PYRHO (O59041) 30S ribosomal protein S19e|
          Length = 150

 Score =  100 bits (249), Expect = 3e-21
 Identities = 50/137 (36%), Positives = 78/137 (56%)
 Frame = -2

Query: 542 VKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGG 363
           V+  +  LK   +++ PEW   VKT R KE  P   DW+Y R AS+ R++Y+   +GI  
Sbjct: 13  VERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRVYIDGPVGIER 72

Query: 362 FQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQV 183
            +  YGGR+  G  P  F K+ G++ R  LQ+L+  G I+  P  GR++T +GR  LD++
Sbjct: 73  LRTYYGGRKNRGHAPERFYKAGGSIIRKALQQLEAAGFIEKVPGKGRVVTPKGRSFLDKI 132

Query: 182 AGTVPAEF*SVEVPSMK 132
           A  +  E   + +P +K
Sbjct: 133 ATELKKELEEI-IPELK 148

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>RS19E_THEVO (Q97CU4) 30S ribosomal protein S19e|
          Length = 150

 Score = 85.9 bits (211), Expect = 7e-17
 Identities = 45/117 (38%), Positives = 63/117 (53%)
 Frame = -2

Query: 530 SAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKI 351
           S  LK   K++ P WV  VKT   KE PP   DW Y+RAASM RK+Y+   +GI      
Sbjct: 17  SGKLKEEKKIKEPNWVKFVKTGVSKEKPPLQDDWIYVRAASMLRKLYINGYLGISRMSSE 76

Query: 350 YGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVA 180
           YGG+   GS+  H    S +++R +  EL+  G++    K GR ++ QG   LD  +
Sbjct: 77  YGGKVDRGSKRYHAASGSRSITRFLFHELESAGLVQKTQK-GRSLSPQGMSLLDNAS 132

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>RS19E_HALMA (P19952) 30S ribosomal protein S19e (HS12) (E1.3)|
          Length = 152

 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 4/135 (2%)
 Frame = -2

Query: 554 PHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGI 375
           P E ++A +  L     +E P+W +  KT   +ELPP   D++  RAAS+ RK+ +   +
Sbjct: 8   PEELIEALTETLADEDDIEAPDWAEFTKTGVDRELPPEQEDFWTRRAASLLRKVAVDGPV 67

Query: 374 GIGGFQKIYG----GRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQ 207
           G+   +  YG    G  R   RP    K SG + R  LQ+L+  G ++     GR +T  
Sbjct: 68  GVNALRSEYGTSKQGTTRYRVRPHQKTKGSGNIIRTALQQLEDAGYVETSENDGRRVTGD 127

Query: 206 GRRDLDQVAGTVPAE 162
           GR  LD  AG +  E
Sbjct: 128 GRSLLDDTAGDLLTE 142

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>RS19E_THEAC (Q9HM21) 30S ribosomal protein S19e|
          Length = 150

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 43/117 (36%), Positives = 63/117 (53%)
 Frame = -2

Query: 530 SAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKI 351
           S  LK   K+  P+W   VKT   +E  P + DW Y+RAA+M RK+Y+   +GI      
Sbjct: 17  SEKLKSEKKIAEPDWSKYVKTGISREKSPVNRDWIYVRAAAMLRKLYINGYLGISRMSSE 76

Query: 350 YGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVA 180
           YGG+   GS+  H  + S ++ R +  EL+K G +   PK GR ++ QG   LD  +
Sbjct: 77  YGGKVDRGSKRYHAAQGSRSIIRYLFHELEKAGYVQKTPK-GRSLSPQGMSLLDNAS 132

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>LCE1A_HUMAN (Q5T7P2) Late cornified envelope protein 1A (Late envelope protein|
           1)
          Length = 110

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 19/50 (38%), Positives = 23/50 (46%)
 Frame = +2

Query: 260 SATPEGCCGKQHHCSCRSVGGVNRSSDGHHRSSGIHQSQFPASGRSSLPS 409
           S +  GCCG      C S GG    S  HHR    H+ +  +SG  S PS
Sbjct: 45  SVSSGGCCGSSSGGGCSSGGGGCCLS--HHRRHRSHRHRLQSSGCCSQPS 92

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>ATBF1_HUMAN (Q15911) Alpha-fetoprotein enhancer-binding protein (AT motif-binding|
            factor) (AT-binding transcription factor 1)
          Length = 3703

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 14/44 (31%), Positives = 27/44 (61%)
 Frame = +1

Query: 109  PNPTTEHNFIDGTSTDQNSAGTVPATWSRSRLPWEVMSLPPLGS 240
            P+P +       T+++ +SAG  P++   S++P E + +PPLG+
Sbjct: 1652 PSPVSTSGSNTFTTSNPSSAGIAPSSNLLSQVPTESVGMPPLGN 1695

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>TRPF_SACKU (Q5XQP9) N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3.1.24)|
           (PRAI)
          Length = 226

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -2

Query: 311 FCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 171
           F  + G    N+   LQ  G+I VD  GG  + + G +D+D++   V
Sbjct: 175 FMLAGGLTPENVSDALQLHGVIGVDVSGG--VETNGMKDMDKITNFV 219

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>STP2_CANFA (O77645) Nuclear transition protein 2 (TP-2) (TP2)|
          Length = 129

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 9/61 (14%)
 Frame = +2

Query: 257 SSATPEG--C--CGKQHHC-----SCRSVGGVNRSSDGHHRSSGIHQSQFPASGRSSLPS 409
           S++ P+G  C  C    HC     SC      ++S  GHH SSG HQSQ P     +LP 
Sbjct: 17  SNSRPQGHTCSQCTCSSHCQTCSQSCSQSRSSSQSPTGHHSSSG-HQSQSP---HPTLPP 72

Query: 410 R 412
           R
Sbjct: 73  R 73

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>LCE1C_HUMAN (Q5T751) Late cornified envelope protein 1C (Late envelope protein|
           3)
          Length = 118

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
 Frame = +2

Query: 260 SATPEGCCGKQHHCSCRSVGGVNRSSDG------HHRSSGIHQSQFPASGRSSLPS 409
           S +  GCCG     SC S  G   SS G      HHR    H  +  +SG  S PS
Sbjct: 45  SVSSGGCCGSSSGGSCGSSSGGCCSSGGGGCCLSHHRRRRSHCHRPQSSGCCSQPS 100

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>LCE1B_HUMAN (Q5T7P3) Late cornified envelope protein 1B (Late envelope protein|
           2) (Small proline-rich-like epidermal differentiation
           complex protein 2A)
          Length = 118

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
 Frame = +2

Query: 260 SATPEGCCGKQHHCSCRSVGGVNRSSDG------HHRSSGIHQSQFPASGRSSLPS 409
           S +  GCCG     SC S  G   SS G      HHR    H  +  +SG  S PS
Sbjct: 45  SVSSGGCCGSSSGGSCGSSSGGCCSSGGGGCCLSHHRRRRSHCHRPQSSGCCSQPS 100

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>LCE1F_HUMAN (Q5T754) Late cornified envelope protein 1F (Late envelope protein|
           6)
          Length = 118

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 6/61 (9%)
 Frame = +2

Query: 260 SATPEGCCGKQHHCSCRSVGGVNRSSDG------HHRSSGIHQSQFPASGRSSLPSRQP* 421
           S +  GCCG      C S GG   SS G      HHR    H+ +  +S   S PS    
Sbjct: 45  SVSSGGCCGSSSGGCCSSGGGGCCSSGGGGCCLSHHRRRRSHRHRPQSSDCCSQPSAGSS 104

Query: 422 C 424
           C
Sbjct: 105 C 105

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>HMD_METVO (Q50840) 5,10-methenyltetrahydromethanopterin hydrogenase (EC|
           1.12.98.2) (H(2)-forming
           N(5),N(10)-methylenetetrahydromethanopterin
           dehydrogenase)
           (N(5),N(10)-methenyltetrahydromethanopterin hydrogenase)
           (H(2)-dependent methylene-H(4)MPT dehydro
          Length = 343

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 9/136 (6%)
 Frame = -2

Query: 548 EFVKAYSAHLKRSGKMELPEWVDIVKTARFKELP-PTDADWYYIRAASMARKIYLRQGIG 372
           ++ K   AHL    +  +PE  D VK A+ KELP P  A  +++    +  K+       
Sbjct: 80  DYAKVMEAHLAGKAEEVMPEIRDAVK-AKAKELPKPPKACIHFVNPEKVGLKVTADDKDA 138

Query: 371 IGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIID-----VDPKGGRLITSQ 207
           +     +     + GS+P        A+    +  +++  I+        PK  ++    
Sbjct: 139 VKDADIVITWLPKGGSQP--------AIIEKFVANIKEGAIVTHACTIPTPKFAKIFKDL 190

Query: 206 GRRDLDQVA---GTVP 168
           GR DL+ ++   G VP
Sbjct: 191 GRDDLNIISYHPGAVP 206

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>DDL_MYCSM (Q9ZGN0) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine|
           synthetase) (D-Ala-D-Ala ligase)
          Length = 373

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/63 (30%), Positives = 30/63 (47%)
 Frame = -2

Query: 353 IYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGT 174
           +YGGR    S     C S+G++ RN+  E  ++  I + P G  ++T      L    G 
Sbjct: 16  VYGGRS---SEHAISCVSAGSILRNLDPERFEVVAIGITPDGSWVLTDGRPETLAITDGK 72

Query: 173 VPA 165
           +PA
Sbjct: 73  LPA 75

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>PPGK_MYCLE (Q49988) Polyphosphate glucokinase (EC 2.7.1.63)|
           (Polyphosphate--glucose phosphotransferase)
          Length = 324

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +1

Query: 91  HNSKL*PNPTTEHNFIDGTSTDQNSAGTVPATWSRSRLPW 210
           HN KL PN    H  +DG   +Q +A +V   +  S   W
Sbjct: 218 HNGKLIPNTEFGHLEVDGKEAEQRAASSVKDKYKWSYRTW 257

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>CUTL1_CANFA (P39881) Homeobox protein cut-like 1 (CCAAT displacement protein)|
            (CDP) (Homeobox protein Clox) (Clox-1) (Fragment)
          Length = 975

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = +2

Query: 284  GKQHHCSCRSVGGVNRSSDGHHRSSGIHQSQFPASGR--SSLPS 409
            G + + S  + GG  R+ DG HRSS +  +  PA+ R  SSL S
Sbjct: 885  GGRRYLSRPARGGPCRARDGAHRSSALPSTSAPAAARRPSSLQS 928

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>YDHC_BACSU (O05494) Hypothetical transcriptional regulator ydhC|
          Length = 224

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
 Frame = -2

Query: 353 IYGGRQRNGSR--PPHFCKSSGAVSRNILQE----LQKMGIIDVDPKGGRLITSQGRRDL 192
           I+ G  + G R       KS G VSR+ ++E    L+K G++  D + G  ITS   +D+
Sbjct: 24  IFNGTFKPGERINETQLAKSFG-VSRSPIREAMRLLEKDGLLKADDRNGFSITSLTAKDV 82

Query: 191 DQVAG-TVPAEF*SVEV 144
           D++    +P E  +VE+
Sbjct: 83  DEIYKIRIPLEQLAVEL 99

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>GAL1_PYRKO (Q5JEK8) Galactokinase (EC 2.7.1.6) (Galactose kinase)|
          Length = 350

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 6/34 (17%)
 Frame = -2

Query: 554 PHEFVKAYSAHLKRSGKMELPE------WVDIVK 471
           PHE V+ YS H K+S   EL +      W D VK
Sbjct: 38  PHERVELYSEHFKKSVSFELEKLEKGNNWADYVK 71

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>RPOC_SYMTH (Q67JT4) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1179

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -2

Query: 554 PHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWY 426
           PHE + AY     ++G +EL +WV+I      K+L P   +W+
Sbjct: 518 PHEALLAY-----QNGLVELHDWVEIRFPEPPKDLEPYSEEWW 555

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>LCE1E_HUMAN (Q5T753) Late cornified envelope protein 1E (Late envelope protein|
           5)
          Length = 118

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
 Frame = +2

Query: 260 SATPEGCCGKQHHCSCRSVGGVNRSSDG------HHRSSGIHQSQFPASGRSSLPS 409
           S +  GCCG     SC S  G   SS G      HHR    H+ +  +S   S PS
Sbjct: 45  SVSSGGCCGSSSGGSCGSSSGGCCSSGGGGCCLSHHRHHRSHRHRPQSSDCCSQPS 100

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>GRIN1_MOUSE (Q3UNH4) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)|
          Length = 932

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 20/42 (47%), Positives = 22/42 (52%)
 Frame = +2

Query: 329 RSSDGHHRSSGIHQSQFPASGRSSLPSRQP*CSTSQRQ*AAA 454
           R SDG   SS   Q Q       SLP R+P  STSQ+  AAA
Sbjct: 647 RQSDGTPYSSA--QPQRDTRSIGSLPEREPSASTSQKDLAAA 686


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,040,323
Number of Sequences: 219361
Number of extensions: 1631303
Number of successful extensions: 5126
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 4920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5107
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result