ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd26d05 |
|---|---|
| Clone Library Name | barley_pub |
>SET_RAT (Q63945) Protein SET (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A)| (Template-activating factor I) (TAF-I) (Liver regeneration-related protein LRRGR00002) Length = 289 Score = 81.6 bits (200), Expect = 2e-15 Identities = 40/96 (41%), Positives = 60/96 (62%), Gaps = 4/96 (4%) Frame = -1 Query: 639 ENPYFEDRKLTKSYTFADDGTTTINATSIKWKEGMEI--NGNAIKKKGSKRPLVE--ESF 472 ENPYFE++ L+K + + G + +T IKWK G ++ + + K S++ E ESF Sbjct: 142 ENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEPESF 201 Query: 471 FTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 364 FTWFTD +D DE+ E+IK+D+WPNPL+Y+ Sbjct: 202 FTWFTDH-----SDAGADELGEVIKDDIWPNPLQYY 232
>SET_MOUSE (Q9EQU5) Protein SET (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A)| (Template-activating factor I) (TAF-I) Length = 289 Score = 81.6 bits (200), Expect = 2e-15 Identities = 40/96 (41%), Positives = 60/96 (62%), Gaps = 4/96 (4%) Frame = -1 Query: 639 ENPYFEDRKLTKSYTFADDGTTTINATSIKWKEGMEI--NGNAIKKKGSKRPLVE--ESF 472 ENPYFE++ L+K + + G + +T IKWK G ++ + + K S++ E ESF Sbjct: 142 ENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEPESF 201 Query: 471 FTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 364 FTWFTD +D DE+ E+IK+D+WPNPL+Y+ Sbjct: 202 FTWFTDH-----SDAGADELGEVIKDDIWPNPLQYY 232
>SET_HUMAN (Q01105) Protein SET (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A)| (Template-activating factor I) (TAF-I) (HLA-DR-associated protein II) (PHAPII) (Inhibitor of granzyme A-activated DNase) (IGAAD) Length = 290 Score = 81.6 bits (200), Expect = 2e-15 Identities = 40/96 (41%), Positives = 60/96 (62%), Gaps = 4/96 (4%) Frame = -1 Query: 639 ENPYFEDRKLTKSYTFADDGTTTINATSIKWKEGMEI--NGNAIKKKGSKRPLVE--ESF 472 ENPYFE++ L+K + + G + +T IKWK G ++ + + K S++ E ESF Sbjct: 143 ENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEPESF 202 Query: 471 FTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 364 FTWFTD +D DE+ E+IK+D+WPNPL+Y+ Sbjct: 203 FTWFTDH-----SDAGADELGEVIKDDIWPNPLQYY 233
>SET_DROME (P53997) Protein SET| Length = 269 Score = 72.4 bits (176), Expect = 1e-12 Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 9/101 (8%) Frame = -1 Query: 639 ENPYFEDRKLTKSYTFADDGTT------TINATSIKWKEGMEINGNAIKKK-GSKRPLVE 481 ENPYFE++ LTK + + +T IKWKEG + + K G+K+ Sbjct: 131 ENPYFENKVLTKEFHLNSAAASENGDWPASTSTPIKWKEGKNLLKLLLTKPYGNKKKRNS 190 Query: 480 E--SFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 364 E +FF WF+D D V DE+AE+IK+DLWPNPL+Y+ Sbjct: 191 EYKTFFDWFSDN-----TDPVNDEIAELIKDDLWPNPLQYY 226
>TSYL1_HUMAN (Q9H0U9) Testis-specific Y-encoded-like protein 1 (TSPY-like 1)| Length = 438 Score = 64.3 bits (155), Expect = 3e-10 Identities = 36/91 (39%), Positives = 50/91 (54%) Frame = -1 Query: 636 NPYFEDRKLTKSYTFADDGTTTINATSIKWKEGMEINGNAIKKKGSKRPLVEESFFTWFT 457 NPYF ++ + K Y G +T I W+ G E + + + SFFTWF+ Sbjct: 329 NPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQD-----LICSFFTWFS 383 Query: 456 DTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 364 D SL + D++AEIIKEDLWPNPL+Y+ Sbjct: 384 D---HSLPES--DKIAEIIKEDLWPNPLQYY 409
>TSYL1_MOUSE (O88852) Testis-specific Y-encoded-like protein 1 (TSPY-like 1)| Length = 379 Score = 63.9 bits (154), Expect = 4e-10 Identities = 36/91 (39%), Positives = 49/91 (53%) Frame = -1 Query: 636 NPYFEDRKLTKSYTFADDGTTTINATSIKWKEGMEINGNAIKKKGSKRPLVEESFFTWFT 457 NPYF ++ + K Y G +T I W+ G E + + + SFFTWF+ Sbjct: 270 NPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQD-----LICSFFTWFS 324 Query: 456 DTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 364 D SL + D +AEIIKEDLWPNPL+Y+ Sbjct: 325 D---HSLPES--DRIAEIIKEDLWPNPLQYY 350
>TSYL3_HUMAN (Q9H489) Testis-specific Y-encoded-like protein 3 (TSPY-like 3)| Length = 355 Score = 63.2 bits (152), Expect = 6e-10 Identities = 35/91 (38%), Positives = 50/91 (54%) Frame = -1 Query: 636 NPYFEDRKLTKSYTFADDGTTTINATSIKWKEGMEINGNAIKKKGSKRPLVEESFFTWFT 457 NPYF+++ + K Y G AT I+W G E + + + R SFF+WF+ Sbjct: 245 NPYFQNKVIVKEYECRASGRVVSIATRIRWHWGQEPPALVHRNRDTVR-----SFFSWFS 299 Query: 456 DTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 364 SL + D VA+IIK+DLWPNPL+Y+ Sbjct: 300 Q---HSLPEA--DRVAQIIKDDLWPNPLQYY 325
>TSYL4_HUMAN (Q9UJ04) Testis-specific Y-encoded-like protein 4 (TSPY-like 4)| Length = 414 Score = 61.2 bits (147), Expect = 2e-09 Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 1/92 (1%) Frame = -1 Query: 636 NPYFEDRKLTKSYTFADDGTTTINATSIKWKEGMEINGNAIK-KKGSKRPLVEESFFTWF 460 NPYF + L K Y G +T I+W G + + + ++G+ P SFF WF Sbjct: 303 NPYFRNEGLVKEYERRSSGRVVSLSTPIRWHRGQDPQAHIHRNREGNTIP----SFFNWF 358 Query: 459 TDTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 364 +D H L D +AEIIK +LWPNPL+Y+ Sbjct: 359 SD--HSLLEF---DRIAEIIKGELWPNPLQYY 385
>TSYL4_MOUSE (Q8VD63) Testis-specific Y-encoded-like protein 4 (TSPY-like 4)| Length = 406 Score = 59.3 bits (142), Expect = 9e-09 Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 1/92 (1%) Frame = -1 Query: 636 NPYFEDRKLTKSYTFADDGTTTINATSIKWKEGMEINGNAIK-KKGSKRPLVEESFFTWF 460 NPYF + L K Y G +T I+W G E + + ++G+ P SFF WF Sbjct: 295 NPYFRNEGLVKEYERRSSGRVVSLSTPIRWHRGQEPQAHIHRNREGNTIP----SFFNWF 350 Query: 459 TDTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 364 +D H L D +AEIIK +LW NPL+Y+ Sbjct: 351 SD--HSLLEF---DRIAEIIKGELWSNPLQYY 377
>TSPY1_HUMAN (Q01534) Testis-specific Y-encoded protein 1| Length = 308 Score = 51.2 bits (121), Expect = 3e-06 Identities = 28/91 (30%), Positives = 48/91 (52%) Frame = -1 Query: 636 NPYFEDRKLTKSYTFADDGTTTINATSIKWKEGMEINGNAIKKKGSKRPLVEESFFTWFT 457 NPYF+++ +TK Y ++T I+W E+ A +++ L +FF WF+ Sbjct: 208 NPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVE--AYRRRHHNSSL---NFFNWFS 262 Query: 456 DTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 364 D +++AEI+ +DLW NPL+Y+ Sbjct: 263 DHNFAG-----SNKIAEILCKDLWRNPLQYY 288
>SPR2_CAEEL (Q18240) Suppressor of presenilin 2| Length = 312 Score = 50.1 bits (118), Expect = 6e-06 Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 5/96 (5%) Frame = -1 Query: 636 NPYFEDRKLTKSYTFADDGTTTINATSIKWKEGMEINGNAIKKKGSKRPLVEE-----SF 472 N YF + +TKSY + +T T I+WKE K P E+ +F Sbjct: 130 NEYFTNEVITKSYHLQSESPST-EITEIEWKEN------------KKPPFPEDGDSAHTF 176 Query: 471 FTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 364 W T + +L D DE+AE+IK+DL+ NPL+Y+ Sbjct: 177 LEWLT---YAALPDS--DEIAEVIKDDLYVNPLQYY 207
>TSPY1_RAT (Q9R1M3) Testis-specific Y-encoded protein 1 (rTSPY)| Length = 334 Score = 49.7 bits (117), Expect = 7e-06 Identities = 33/93 (35%), Positives = 49/93 (52%) Frame = -1 Query: 642 SENPYFEDRKLTKSYTFADDGTTTINATSIKWKEGMEINGNAIKKKGSKRPLVEESFFTW 463 SENPYF + +TK Y + G ++++I+W G +G A + + R +FF W Sbjct: 246 SENPYFRNDIVTKDYQLSIIGYKESDSSTIEWI-GQAEHGYANCMQDTTRL----TFFNW 300 Query: 462 FTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 364 HK + +AEII +DLWPNPL Y+ Sbjct: 301 LC--AHKFPGS---NRIAEIIMDDLWPNPLYYY 328
>ASP_PLAFS (P13825) Aspartic acid-rich protein precursor| Length = 253 Score = 48.9 bits (115), Expect = 1e-05 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 1/90 (1%) Frame = -1 Query: 630 YFEDRKLTKSYTFADDGTTTINATSIKWKEGME-INGNAIKKKGSKRPLVEESFFTWFTD 454 + E L K TF ++ + T IKWKEG I + + + S F WFT Sbjct: 116 FMEPLTLVKHVTFDNNQEKVVECTRIKWKEGKNPIAAVTHNRSDLDNEIPKWSIFEWFTT 175 Query: 453 TEHKSLADGVQDEVAEIIKEDLWPNPLKYF 364 E + D V E+I+ ++W NPL Y+ Sbjct: 176 DELQDKPD-----VGELIRREIWHNPLSYY 200
>TSPY1_BOVIN (O19110) Testis-specific Y-encoded protein 1 (bTSPY)| Length = 317 Score = 40.0 bits (92), Expect = 0.006 Identities = 26/92 (28%), Positives = 40/92 (43%) Frame = -1 Query: 639 ENPYFEDRKLTKSYTFADDGTTTINATSIKWKEGMEINGNAIKKKGSKRPLVEESFFTWF 460 +NPYF + + K Y G +T + W E A ++ R L +F W Sbjct: 225 DNPYFLNSVIIKEYYLDITGYRARRSTPVHWFWDFE--RGAPSRRRDTRSL---NFLNWL 279 Query: 459 TDTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 364 + + +AEII ED+W +PLKY+ Sbjct: 280 SGHNGPE-----SNRIAEIISEDVWDDPLKYY 306
>NP1L1_HUMAN (P55209) Nucleosome assembly protein 1-like 1 (NAP-1-related| protein) (hNRP) Length = 391 Score = 36.6 bits (83), Expect = 0.065 Identities = 33/122 (27%), Positives = 49/122 (40%), Gaps = 31/122 (25%) Frame = -1 Query: 636 NPYFEDRKLTKSYT----------FADDGTTTINATS--IKWKEGMEINGNAIKKK---- 505 N YF + LTK+Y F+ DG + T I WK+G + IKKK Sbjct: 221 NEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHK 280 Query: 504 --GSKRPLVE----ESFFTWFTDTEHKSLADGVQD---------EVAEIIKEDLWPNPLK 370 G+ R + + +SFF +F E D D E+ ++E + P + Sbjct: 281 GRGTVRTVTKTVSNDSFFNFFAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVL 340 Query: 369 YF 364 YF Sbjct: 341 YF 342
>NP1L1_MOUSE (P28656) Nucleosome assembly protein 1-like 1 (NAP-1-related| protein) (Brain protein DN38) Length = 391 Score = 36.2 bits (82), Expect = 0.084 Identities = 33/122 (27%), Positives = 49/122 (40%), Gaps = 31/122 (25%) Frame = -1 Query: 636 NPYFEDRKLTKSYT----------FADDGTTTINATS--IKWKEGMEINGNAIKKK---- 505 N YF + LTK+Y F+ DG + T I WK+G + IKKK Sbjct: 221 NDYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHK 280 Query: 504 --GSKRPLVE----ESFFTWFTDTEHKSLADGVQD---------EVAEIIKEDLWPNPLK 370 G+ R + + +SFF +F E D D E+ ++E + P + Sbjct: 281 GRGTVRTVTKTVSNDSFFNFFAPPEVPENGDLDDDAEAILAADFEIGHFLRERIIPRSVL 340 Query: 369 YF 364 YF Sbjct: 341 YF 342
>NP1L1_RAT (Q9Z2G8) Nucleosome assembly protein 1-like 1 (NAP-1-related| protein) Length = 390 Score = 35.0 bits (79), Expect = 0.19 Identities = 33/122 (27%), Positives = 48/122 (39%), Gaps = 31/122 (25%) Frame = -1 Query: 636 NPYFEDRKLTKSYT----------FADDGTTTINATS--IKWKEGMEINGNAIKKK---- 505 N YF + LTK+Y F+ DG + T I WK+G + IKKK Sbjct: 220 NEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHK 279 Query: 504 --GSKRPLV----EESFFTWFTDTEHKSLADGVQD---------EVAEIIKEDLWPNPLK 370 G+ R + + SFF +F E D D E+ ++E + P + Sbjct: 280 GRGTVRTVTKTVSKTSFFNFFAPPEVPENGDLDDDXEAILAADFEIGHFLRERIIPRSVL 339 Query: 369 YF 364 YF Sbjct: 340 YF 341
>YCO6_SCHPO (O59797) Putative nucleosome assembly protein C364.06| Length = 393 Score = 33.9 bits (76), Expect = 0.42 Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 29/122 (23%) Frame = -1 Query: 642 SENPYFEDRKLTKSYTFADD-GTTTI------NATSIKWKEGMEINGNAIKKKGS----- 499 +ENP+F ++ LTK+Y + ++ G + + + WKE ++ + KK Sbjct: 213 AENPFFTNKILTKTYYYMEESGPSNVFLYDHAEGDKVDWKENADLTVRTVTKKQRNKNTK 272 Query: 498 -----KRPLVEESFFTWFTDTEHKSLADGVQD------------EVAEIIKEDLWPNPLK 370 K + +SFF +F S D + ++ E KE L P ++ Sbjct: 273 QTRVVKVSVPRDSFFNFFNPPTPPSEEDEESESPELDELLELDYQIGEDFKEKLIPRAVE 332 Query: 369 YF 364 +F Sbjct: 333 WF 334
>NP1L4_HUMAN (Q99733) Nucleosome assembly protein 1-like 4 (Nucleosome assembly| protein 2) (NAP2) Length = 375 Score = 33.1 bits (74), Expect = 0.71 Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 32/123 (26%) Frame = -1 Query: 636 NPYFEDRKLTKSYT----------FADDGTTTINAT--SIKWKEGMEINGNAIKKK---- 505 N YF + LTK+Y F+ +G ++ +I WK+G + IKKK Sbjct: 213 NDYFTNSVLTKTYKMKSEPDKADPFSFEGPEIVDCDGCTIDWKKGKNVTVKTIKKKQKHK 272 Query: 504 --GSKRPLVE----ESFFTWFTDTEHKSLADGVQD----------EVAEIIKEDLWPNPL 373 G+ R + + ESFF +F + + + + E+ +E + P + Sbjct: 273 GRGTVRTITKQVPNESFFNFFNPLKASGDGESLDEDSEFTLASDFEIGHFFRERIVPRAV 332 Query: 372 KYF 364 YF Sbjct: 333 LYF 335
>NP1L2_MOUSE (P51860) Nucleosome assembly protein 1-like 2 (Brain-specific| protein, X-linked) Length = 460 Score = 32.0 bits (71), Expect = 1.6 Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 22/96 (22%) Frame = -1 Query: 636 NPYFEDRKLTKSYTFADD----------GTTTINATS--IKWKEGMEINGNAIKKK---- 505 N YF++ LTK+Y GT AT I W EG + IKKK Sbjct: 294 NEYFKNELLTKTYVLKSKLACYDPHPYRGTAIEYATGCDIDWNEGKNVTLRTIKKKQRHR 353 Query: 504 --GSKRPLVE----ESFFTWFTDTEHKSLADGVQDE 415 G+ R + E +SFF +F+ SL GV+++ Sbjct: 354 VWGTVRTVTEDFPKDSFFNFFS-PHGISLNGGVEND 388
>YDT5_SCHPO (O14210) Hypothetical protein C6B12.05c in chromosome I| Length = 295 Score = 31.6 bits (70), Expect = 2.1 Identities = 24/89 (26%), Positives = 38/89 (42%) Frame = -1 Query: 639 ENPYFEDRKLTKSYTFADDGTTTINATSIKWKEGMEINGNAIKKKGSKRPLVEESFFTWF 460 E+ ++ +L + +D T TS K NG A K+K S+R +V+E Sbjct: 73 ESAQVDEEELEEEEEEEEDATPEPVVTSKKNSRSKPKNGGASKRKASRRTVVDEDSENLE 132 Query: 459 TDTEHKSLADGVQDEVAEIIKEDLWPNPL 373 D E S +D +DL+ NP+ Sbjct: 133 GDEEDGSFSD----------LKDLYSNPM 151
>METK_PROMP (Q7V2Y8) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine| adenosyltransferase) (AdoMet synthetase) (MAT) Length = 413 Score = 30.4 bits (67), Expect = 4.6 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Frame = -1 Query: 585 DGTTTINATSIKWKEGMEINGNAIKKKGSKRPLVEESFFTWFTDTEHKSLADGV--QDEV 412 DG T + SI +K+G+ ++ N I T+H + DG+ ++E+ Sbjct: 171 DGKTQV---SIDYKKGVPVSINTI-----------------LISTQHTAEIDGITNEEEI 210 Query: 411 AEIIKEDLWPN 379 + IKEDLW N Sbjct: 211 RQKIKEDLWIN 221
>NP1L2_HUMAN (Q9ULW6) Nucleosome assembly protein 1-like 2 (Brain-specific| protein, X-linked) Length = 460 Score = 29.6 bits (65), Expect = 7.9 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 22/82 (26%) Frame = -1 Query: 636 NPYFEDRKLTKSYTFADD----------GTTTINATS--IKWKEGMEINGNAIKKK---- 505 N YF++ LTK+Y GT +T I W EG + IKKK Sbjct: 294 NEYFKNELLTKTYVLKSKLAYYDPHPYRGTAIEYSTGCEIDWNEGKNVTLKTIKKKQKHR 353 Query: 504 --GSKRPLVE----ESFFTWFT 457 G+ R + E +SFF +F+ Sbjct: 354 IWGTIRTVTEDFPKDSFFNFFS 375 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,944,064 Number of Sequences: 219361 Number of extensions: 1297073 Number of successful extensions: 3218 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 3111 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3198 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 5972710590 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
