>ELAS_PSEAE (P14756) Pseudolysin precursor (EC 3.4.24.26) (Elastase) (Neutral|
           metalloproteinase)
          Length = 498

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
 Frame = -3

Query: 407 PSSGQVKLGGGYSGSLD-LASSRVPRCSNQTTLLFTDVGLRVVAE---KVKTKARGDFDR 240
           P + Q  +G G +  L  + S+ +P     T       G+RVV E   +VK   +    +
Sbjct: 43  PVTLQAAVGAGGADELKAIRSTTLPNGKQVTRYEQFHNGVRVVGEAITEVKGPGKSVAAQ 102

Query: 239 RSSSWVSFVAALHPGSPVAAVS 174
           RS  +V+ +AA  PGS  AAVS
Sbjct: 103 RSGHFVANIAADLPGSTTAAVS 124

>MRT4_YEAST (P33201) mRNA turnover protein 4|
          Length = 236

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -3

Query: 332 CSNQTTLLFTDVGLRVVAEKVKTKARGDFDR 240
           CS  T LLFTD  +  V E  K+  R D+ R
Sbjct: 96  CSGVTGLLFTDEDVNTVKEYFKSYVRSDYSR 126

>PTH_RHIME (Q92N67) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 239

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = -3

Query: 395 QVKLGGGYSGSLDLASSRVPRCSNQTTLLFTDVGLRVVAEKVKTKARGDFDRRSSSWVSF 216
           ++K GGG+ G   + S     C  +   L   +G   V + V     GDF +   +W+S 
Sbjct: 101 RIKTGGGHGGHNGIKSIDA-HCGKEYRRLRLGIGHPGVKDLVHAHVLGDFAKADQAWLSL 159

Query: 215 V 213
           +
Sbjct: 160 L 160


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,603,534
Number of Sequences: 219361
Number of extensions: 1187489
Number of successful extensions: 3185
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3185
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)