Clone Name | rbasd25n20 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK072479.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023126M16, full insert sequence Length = 1353 Score = 375 bits (189), Expect = e-100 Identities = 381/445 (85%) Strand = Plus / Minus Query: 117 cggtgtcaaataaggcactatgtacttcttcatgtcgctccttgatatgcggaggtgacc 176 |||| |||| || |||||||||||||||||| |||| || || || |||| |||||||| Sbjct: 1010 cggtttcaagtatggcactatgtacttcttcgtgtcacttctggagatgctcaggtgacc 951 Query: 177 tcctggcaccgacacaaacttaacacgcccagtctcatccaaagtcctcaagccgatcca 236 ||||||||| || || |||||||||||||||| ||| ||||||| | ||||||||||||| Sbjct: 950 tcctggcactgatacgaacttaacacgcccagcctcctccaaagccttcaagccgatcca 891 Query: 237 gtcttcagtatatagctttgtctcctgaggaggcagcacaggattaaaggcgccatcagg 296 ||| || || || | |||||||| ||||| ||| |||| ||| | ||||||||||| || Sbjct: 890 gtcctccgtgtacaactttgtcttttgaggtggctgcactggactgaaggcgccatcggg 831 Query: 297 ataataaccaaaccatgctgtttcccgaggtatcaagactgcgtcgtcttcaaacatgat 356 ||| || || |||||||| |||||||| ||||| || ||||||||||| |||||||| || Sbjct: 830 atagtacccgaaccatgccgtttcccggggtattaacactgcgtcgtcctcaaacataat 771 Query: 357 cagtaccaagttctccaagctgctaaatctttctttatatgtaatgtttctttcacttgg 416 || ||| | || |||| |||||| ||||||| |||||| ||| |||||||||||||| Sbjct: 770 caatactagattttccaggctgctgaatctttgtttatacgtagcatttctttcacttgg 711 Query: 417 tatctcattattaagcttaggaagaaatttgcaacccttcaaataatctgtcatatcagt 476 ||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 710 tatctcattgttaagctttggaagaaacttgcaacccttcaaataatctgtcatatcagt 651 Query: 477 gggaatctttaggtaaccgctaggggcaagatgtgcctgcacatagtttgaatatatctc 536 ||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||| Sbjct: 650 gggtatctttaggtaaccactaggagcaaggtgtgcctgtacatagtttgaatatatctc 591 Query: 537 cagttgaatcagcacatcaacaaga 561 || || |||||| |||||| |||| Sbjct: 590 caatttaatcagagcatcaataaga 566
>ref|NM_197762.1| Oryza sativa (japonica cultivar-group) putative palmitoyl-protein thioesterase (OSJNBa0027P10.1), mRNA Length = 1212 Score = 337 bits (170), Expect = 2e-89 Identities = 332/386 (86%) Strand = Plus / Minus Query: 176 ctcctggcaccgacacaaacttaacacgcccagtctcatccaaagtcctcaagccgatcc 235 |||||||||| || || |||||||||||||||| ||| ||||||| | |||||||||||| Sbjct: 859 ctcctggcactgatacgaacttaacacgcccagcctcctccaaagccttcaagccgatcc 800 Query: 236 agtcttcagtatatagctttgtctcctgaggaggcagcacaggattaaaggcgccatcag 295 |||| || || || | |||||||| ||||| ||| |||| ||| | ||||||||||| | Sbjct: 799 agtcctccgtgtacaactttgtcttttgaggtggctgcactggactgaaggcgccatcgg 740 Query: 296 gataataaccaaaccatgctgtttcccgaggtatcaagactgcgtcgtcttcaaacatga 355 |||| || || |||||||| |||||||| ||||| || ||||||||||| |||||||| | Sbjct: 739 gatagtacccgaaccatgccgtttcccggggtattaacactgcgtcgtcctcaaacataa 680 Query: 356 tcagtaccaagttctccaagctgctaaatctttctttatatgtaatgtttctttcacttg 415 ||| ||| | || |||| |||||| ||||||| |||||| ||| ||||||||||||| Sbjct: 679 tcaatactagattttccaggctgctgaatctttgtttatacgtagcatttctttcacttg 620 Query: 416 gtatctcattattaagcttaggaagaaatttgcaacccttcaaataatctgtcatatcag 475 |||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 619 gtatctcattgttaagctttggaagaaacttgcaacccttcaaataatctgtcatatcag 560 Query: 476 tgggaatctttaggtaaccgctaggggcaagatgtgcctgcacatagtttgaatatatct 535 |||| |||||||||||||| ||||| ||||| |||||||| ||||||||||||||||||| Sbjct: 559 tgggtatctttaggtaaccactaggagcaaggtgtgcctgtacatagtttgaatatatct 500 Query: 536 ccagttgaatcagcacatcaacaaga 561 ||| || |||||| |||||| |||| Sbjct: 499 ccaatttaatcagagcatcaataaga 474
>dbj|AK120839.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022G01, full insert sequence Length = 1229 Score = 212 bits (107), Expect = 9e-52 Identities = 251/299 (83%) Strand = Plus / Minus Query: 250 agctttgtctcctgaggaggcagcacaggattaaaggcgccatcaggataataaccaaac 309 |||||||||| |||||| ||||| ||||||| || | ||||| ||||| ||||||||| Sbjct: 806 agctttgtcttctgagggggcaggacaggatcgaaacctccatctggatagtaaccaaac 747 Query: 310 catgctgtttcccgaggtatcaagactgcgtcgtcttcaaacatgatcagtaccaagttc 369 |||||||||||||||||||||||||| ||||| || | ||||||||| | |||||| ||| Sbjct: 746 catgctgtttcccgaggtatcaagacagcgtcatcctgaaacatgattaataccaaattc 687 Query: 370 tccaagctgctaaatctttctttatatgtaatgtttctttcacttggtatctcattatta 429 || ||||||||||| ||||| || || || |||||||||| ||||| |||||| ||| Sbjct: 686 tctaagctgctaaacctttccttgtaggtggcatttctttcacctggtaactcattgtta 627 Query: 430 agcttaggaagaaatttgcaacccttcaaataatctgtcatatcagtgggaatctttagg 489 ||||| ||||||||| | |||||||| |||||||||| |||||||| || || || | | Sbjct: 626 agctttggaagaaatctacaaccctttaaataatctgaaatatcagttgggattttcatg 567 Query: 490 taaccgctaggggcaagatgtgcctgcacatagtttgaatatatctccagttgaatcag 548 ||||| ||||| |||||||||||||| ||||||| ||| || ||||||| || |||||| Sbjct: 566 taaccactaggtgcaagatgtgcctggacatagtctgagtagatctccattttaatcag 508
>gb|BT016405.1| Zea mays clone Contig238 mRNA sequence Length = 1161 Score = 153 bits (77), Expect = 7e-34 Identities = 344/433 (79%) Strand = Plus / Minus Query: 127 taaggcactatgtacttcttcatgtcgctccttgatatgcggaggtgacctcctggcacc 186 |||||||| ||||||||||||||||| | | || || | || |||||||| ||||| Sbjct: 873 taaggcacaatgtacttcttcatgtcacctttggagataccaagatgacctcccggcaca 814 Query: 187 gacacaaacttaacacgcccagtctcatccaaagtcctcaagccgatccagtcttcagta 246 ||||||||||| || ||||| | ||||||| ||| |||| || ||||||||||| | Sbjct: 813 gacacaaacttcacccgccctgcttcatccagtgtcttcaaaccaatccagtcttcctca 754 Query: 247 tatagctttgtctcctgaggaggcagcacaggattaaaggcgccatcaggataataacca 306 || || || |||| |||||| || || || |||| |||||| |||||||| || |||||| Sbjct: 753 tacagtttcgtcttctgaggtggtagaactggatcaaaggctccatcagggtagtaacca 694 Query: 307 aaccatgctgtttcccgaggtatcaagactgcgtcgtcttcaaacatgatcagtaccaag 366 |||||||| ||||| || ||||||| |||||| || || | |||||| ||||| ||||| Sbjct: 693 aaccatgccgtttctcgtggtatcaggactgcatcatcctgaaacataatcagaaccaaa 634 Query: 367 ttctccaagctgctaaatctttctttatatgtaatgtttctttcacttggtatctcatta 426 ||||| ||||| || |||||||| || || || ||||||| | ||| || ||||| Sbjct: 633 ttctctaagctactgaatctttccttgtaggtggcatttcttttatctggaatttcattg 574 Query: 427 ttaagcttaggaagaaatttgcaacccttcaaataatctgtcatatcagtgggaatcttt 486 ||||| || |||||||| | |||| ||||| |||||||| ||||||||| || || || Sbjct: 573 ttaagttttggaagaaacctacaactcttcagataatctgccatatcagttgggattttg 514 Query: 487 aggtaaccgctaggggcaagatgtgcctgcacatagtttgaatatatctccagttgaatc 546 ||||| || ||||| ||||||||| |||||||||||| ||| || ||||||| || ||| Sbjct: 513 aggtagccactaggtgcaagatgttcctgcacatagtctgagtagatctccaatttgatc 454 Query: 547 agcacatcaacaa 559 || ||||||||| Sbjct: 453 agagcatcaacaa 441
>gb|AY104890.1| Zea mays PCO071167 mRNA sequence Length = 1683 Score = 153 bits (77), Expect = 7e-34 Identities = 344/433 (79%) Strand = Plus / Minus Query: 127 taaggcactatgtacttcttcatgtcgctccttgatatgcggaggtgacctcctggcacc 186 |||||||| ||||||||||||||||| | | || || | || |||||||| ||||| Sbjct: 943 taaggcacaatgtacttcttcatgtcacctttggagataccaagatgacctcccggcaca 884 Query: 187 gacacaaacttaacacgcccagtctcatccaaagtcctcaagccgatccagtcttcagta 246 ||||||||||| || ||||| | ||||||| ||| |||| || ||||||||||| | Sbjct: 883 gacacaaacttcacccgccctgcttcatccagtgtcttcaaaccaatccagtcttcctca 824 Query: 247 tatagctttgtctcctgaggaggcagcacaggattaaaggcgccatcaggataataacca 306 || || || |||| |||||| || || || |||| |||||| |||||||| || |||||| Sbjct: 823 tacagtttcgtcttctgaggtggtagaactggatcaaaggctccatcagggtagtaacca 764 Query: 307 aaccatgctgtttcccgaggtatcaagactgcgtcgtcttcaaacatgatcagtaccaag 366 |||||||| ||||| || ||||||| |||||| || || | |||||| ||||| ||||| Sbjct: 763 aaccatgccgtttctcgtggtatcaggactgcatcatcctgaaacataatcagaaccaaa 704 Query: 367 ttctccaagctgctaaatctttctttatatgtaatgtttctttcacttggtatctcatta 426 ||||| ||||| || |||||||| || || || ||||||| | ||| || ||||| Sbjct: 703 ttctctaagctactgaatctttccttgtaggtggcatttcttttatctggaatttcattg 644 Query: 427 ttaagcttaggaagaaatttgcaacccttcaaataatctgtcatatcagtgggaatcttt 486 ||||| || |||||||| | |||| ||||| |||||||| ||||||||| || || || Sbjct: 643 ttaagttttggaagaaacctacaactcttcagataatctgccatatcagttgggattttg 584 Query: 487 aggtaaccgctaggggcaagatgtgcctgcacatagtttgaatatatctccagttgaatc 546 ||||| || ||||| ||||||||| |||||||||||| ||| || ||||||| || ||| Sbjct: 583 aggtagccactaggtgcaagatgttcctgcacatagtctgagtagatctccaatttgatc 524 Query: 547 agcacatcaacaa 559 || ||||||||| Sbjct: 523 agagcatcaacaa 511
>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete sequence Length = 141307 Score = 127 bits (64), Expect = 4e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 370 tccaagctgctaaatctttctttatatgtaatgtttctttcacttggtatctcattatta 429 |||| |||||| ||||||| |||||| ||| ||||||||||||||||||||||| ||| Sbjct: 16135 tccaggctgctgaatctttgtttatacgtagcatttctttcacttggtatctcattgtta 16076 Query: 430 agcttaggaagaaatttgcaacccttcaaataatctgtcatatc 473 ||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 16075 agctttggaagaaacttgcaacccttcaaataatctgtcatatc 16032 Score = 109 bits (55), Expect = 1e-20 Identities = 106/123 (86%) Strand = Plus / Minus Query: 117 cggtgtcaaataaggcactatgtacttcttcatgtcgctccttgatatgcggaggtgacc 176 |||| |||| || |||||||||||||||||| |||| || || || |||| |||||||| Sbjct: 17013 cggtttcaagtatggcactatgtacttcttcgtgtcacttctggagatgctcaggtgacc 16954 Query: 177 tcctggcaccgacacaaacttaacacgcccagtctcatccaaagtcctcaagccgatcca 236 ||||||||| || || |||||||||||||||| ||| ||||||| | ||||||||||||| Sbjct: 16953 tcctggcactgatacgaacttaacacgcccagcctcctccaaagccttcaagccgatcca 16894 Query: 237 gtc 239 ||| Sbjct: 16893 gtc 16891 Score = 67.9 bits (34), Expect = 3e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 262 tgaggaggcagcacaggattaaaggcgccatcaggataataaccaaaccatgctgtttcc 321 ||||| ||| |||| ||| | ||||||||||| ||||| || || |||||||| |||||| Sbjct: 16762 tgaggtggctgcactggactgaaggcgccatcgggatagtacccgaaccatgccgtttcc 16703 Query: 322 cgaggtatcaagactgcgtcgtcttcaaac 351 || ||||| || ||||||||||| |||||| Sbjct: 16702 cggggtattaacactgcgtcgtcctcaaac 16673 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 473 cagtgggaatctttaggtaaccgctaggggcaagatgtgcctgca 517 ||||||| |||||||||||||| ||||| ||||| |||||||||| Sbjct: 15347 cagtgggtatctttaggtaaccactaggagcaaggtgtgcctgca 15303 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 512 cctgcacatagtttgaatatatctccagttgaatcagcacatcaacaaga 561 |||| |||||||||||||||||||||| || |||||| |||||| |||| Sbjct: 15202 cctgtacatagtttgaatatatctccaatttaatcagagcatcaataaga 15153
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 127 bits (64), Expect = 4e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 370 tccaagctgctaaatctttctttatatgtaatgtttctttcacttggtatctcattatta 429 |||| |||||| ||||||| |||||| ||| ||||||||||||||||||||||| ||| Sbjct: 21701452 tccaggctgctgaatctttgtttatacgtagcatttctttcacttggtatctcattgtta 21701393 Query: 430 agcttaggaagaaatttgcaacccttcaaataatctgtcatatc 473 ||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 21701392 agctttggaagaaacttgcaacccttcaaataatctgtcatatc 21701349 Score = 109 bits (55), Expect = 1e-20 Identities = 106/123 (86%) Strand = Plus / Minus Query: 117 cggtgtcaaataaggcactatgtacttcttcatgtcgctccttgatatgcggaggtgacc 176 |||| |||| || |||||||||||||||||| |||| || || || |||| |||||||| Sbjct: 21702330 cggtttcaagtatggcactatgtacttcttcgtgtcacttctggagatgctcaggtgacc 21702271 Query: 177 tcctggcaccgacacaaacttaacacgcccagtctcatccaaagtcctcaagccgatcca 236 ||||||||| || || |||||||||||||||| ||| ||||||| | ||||||||||||| Sbjct: 21702270 tcctggcactgatacgaacttaacacgcccagcctcctccaaagccttcaagccgatcca 21702211 Query: 237 gtc 239 ||| Sbjct: 21702210 gtc 21702208 Score = 67.9 bits (34), Expect = 3e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 262 tgaggaggcagcacaggattaaaggcgccatcaggataataaccaaaccatgctgtttcc 321 ||||| ||| |||| ||| | ||||||||||| ||||| || || |||||||| |||||| Sbjct: 21702079 tgaggtggctgcactggactgaaggcgccatcgggatagtacccgaaccatgccgtttcc 21702020 Query: 322 cgaggtatcaagactgcgtcgtcttcaaac 351 || ||||| || ||||||||||| |||||| Sbjct: 21702019 cggggtattaacactgcgtcgtcctcaaac 21701990 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 473 cagtgggaatctttaggtaaccgctaggggcaagatgtgcctgca 517 ||||||| |||||||||||||| ||||| ||||| |||||||||| Sbjct: 21700664 cagtgggtatctttaggtaaccactaggagcaaggtgtgcctgca 21700620 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 512 cctgcacatagtttgaatatatctccagttgaatcagcacatcaacaaga 561 |||| |||||||||||||||||||||| || |||||| |||||| |||| Sbjct: 21700519 cctgtacatagtttgaatatatctccaatttaatcagagcatcaataaga 21700470
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 127 bits (64), Expect = 4e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 370 tccaagctgctaaatctttctttatatgtaatgtttctttcacttggtatctcattatta 429 |||| |||||| ||||||| |||||| ||| ||||||||||||||||||||||| ||| Sbjct: 21713115 tccaggctgctgaatctttgtttatacgtagcatttctttcacttggtatctcattgtta 21713056 Query: 430 agcttaggaagaaatttgcaacccttcaaataatctgtcatatc 473 ||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 21713055 agctttggaagaaacttgcaacccttcaaataatctgtcatatc 21713012 Score = 109 bits (55), Expect = 1e-20 Identities = 106/123 (86%) Strand = Plus / Minus Query: 117 cggtgtcaaataaggcactatgtacttcttcatgtcgctccttgatatgcggaggtgacc 176 |||| |||| || |||||||||||||||||| |||| || || || |||| |||||||| Sbjct: 21713993 cggtttcaagtatggcactatgtacttcttcgtgtcacttctggagatgctcaggtgacc 21713934 Query: 177 tcctggcaccgacacaaacttaacacgcccagtctcatccaaagtcctcaagccgatcca 236 ||||||||| || || |||||||||||||||| ||| ||||||| | ||||||||||||| Sbjct: 21713933 tcctggcactgatacgaacttaacacgcccagcctcctccaaagccttcaagccgatcca 21713874 Query: 237 gtc 239 ||| Sbjct: 21713873 gtc 21713871 Score = 67.9 bits (34), Expect = 3e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 262 tgaggaggcagcacaggattaaaggcgccatcaggataataaccaaaccatgctgtttcc 321 ||||| ||| |||| ||| | ||||||||||| ||||| || || |||||||| |||||| Sbjct: 21713742 tgaggtggctgcactggactgaaggcgccatcgggatagtacccgaaccatgccgtttcc 21713683 Query: 322 cgaggtatcaagactgcgtcgtcttcaaac 351 || ||||| || ||||||||||| |||||| Sbjct: 21713682 cggggtattaacactgcgtcgtcctcaaac 21713653 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 473 cagtgggaatctttaggtaaccgctaggggcaagatgtgcctgca 517 ||||||| |||||||||||||| ||||| ||||| |||||||||| Sbjct: 21712327 cagtgggtatctttaggtaaccactaggagcaaggtgtgcctgca 21712283 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 512 cctgcacatagtttgaatatatctccagttgaatcagcacatcaacaaga 561 |||| |||||||||||||||||||||| || |||||| |||||| |||| Sbjct: 21712182 cctgtacatagtttgaatatatctccaatttaatcagagcatcaataaga 21712133
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 289 ccatcaggataataaccaaaccatgctgtttcccgaggtatcaagactgcgtc 341 ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 88312 ccatctggatagtaaccaaaccatgctgtttcccgaggtatcaagacagcgtc 88260 Score = 79.8 bits (40), Expect = 9e-12 Identities = 97/116 (83%) Strand = Plus / Minus Query: 351 catgatcagtaccaagttctccaagctgctaaatctttctttatatgtaatgtttctttc 410 |||||| | |||||| ||||| ||||||||||| ||||| || || || |||||||| Sbjct: 87615 catgattaataccaaattctctaagctgctaaacctttccttgtaggtggcatttctttc 87556 Query: 411 acttggtatctcattattaagcttaggaagaaatttgcaacccttcaaataatctg 466 || ||||| |||||| |||||||| ||||||||| | |||||||| |||||||||| Sbjct: 87555 acctggtaactcattgttaagctttggaagaaatctacaaccctttaaataatctg 87500 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 489 gtaaccgctaggggcaagatgtgcctgca 517 |||||| ||||| |||||||||||||||| Sbjct: 87213 gtaaccactaggtgcaagatgtgcctgca 87185
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 289 ccatcaggataataaccaaaccatgctgtttcccgaggtatcaagactgcgtc 341 ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22312 ccatctggatagtaaccaaaccatgctgtttcccgaggtatcaagacagcgtc 22260 Score = 79.8 bits (40), Expect = 9e-12 Identities = 97/116 (83%) Strand = Plus / Minus Query: 351 catgatcagtaccaagttctccaagctgctaaatctttctttatatgtaatgtttctttc 410 |||||| | |||||| ||||| ||||||||||| ||||| || || || |||||||| Sbjct: 21615 catgattaataccaaattctctaagctgctaaacctttccttgtaggtggcatttctttc 21556 Query: 411 acttggtatctcattattaagcttaggaagaaatttgcaacccttcaaataatctg 466 || ||||| |||||| |||||||| ||||||||| | |||||||| |||||||||| Sbjct: 21555 acctggtaactcattgttaagctttggaagaaatctacaaccctttaaataatctg 21500 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 489 gtaaccgctaggggcaagatgtgcctgca 517 |||||| ||||| |||||||||||||||| Sbjct: 21213 gtaaccactaggtgcaagatgtgcctgca 21185
>gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0079B22, from chromosome 3, complete sequence Length = 125217 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 289 ccatcaggataataaccaaaccatgctgtttcccgaggtatcaagactgcgtc 341 ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 36906 ccatctggatagtaaccaaaccatgctgtttcccgaggtatcaagacagcgtc 36958 Score = 79.8 bits (40), Expect = 9e-12 Identities = 97/116 (83%) Strand = Plus / Plus Query: 351 catgatcagtaccaagttctccaagctgctaaatctttctttatatgtaatgtttctttc 410 |||||| | |||||| ||||| ||||||||||| ||||| || || || |||||||| Sbjct: 37603 catgattaataccaaattctctaagctgctaaacctttccttgtaggtggcatttctttc 37662 Query: 411 acttggtatctcattattaagcttaggaagaaatttgcaacccttcaaataatctg 466 || ||||| |||||| |||||||| ||||||||| | |||||||| |||||||||| Sbjct: 37663 acctggtaactcattgttaagctttggaagaaatctacaaccctttaaataatctg 37718 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 489 gtaaccgctaggggcaagatgtgcctgca 517 |||||| ||||| |||||||||||||||| Sbjct: 38005 gtaaccactaggtgcaagatgtgcctgca 38033
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 289 ccatcaggataataaccaaaccatgctgtttcccgaggtatcaagactgcgtc 341 ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 88312 ccatctggatagtaaccaaaccatgctgtttcccgaggtatcaagacagcgtc 88260 Score = 79.8 bits (40), Expect = 9e-12 Identities = 97/116 (83%) Strand = Plus / Minus Query: 351 catgatcagtaccaagttctccaagctgctaaatctttctttatatgtaatgtttctttc 410 |||||| | |||||| ||||| ||||||||||| ||||| || || || |||||||| Sbjct: 87615 catgattaataccaaattctctaagctgctaaacctttccttgtaggtggcatttctttc 87556 Query: 411 acttggtatctcattattaagcttaggaagaaatttgcaacccttcaaataatctg 466 || ||||| |||||| |||||||| ||||||||| | |||||||| |||||||||| Sbjct: 87555 acctggtaactcattgttaagctttggaagaaatctacaaccctttaaataatctg 87500 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 489 gtaaccgctaggggcaagatgtgcctgca 517 |||||| ||||| |||||||||||||||| Sbjct: 87213 gtaaccactaggtgcaagatgtgcctgca 87185
>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete sequence Length = 132927 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 473 cagtgggaatctttaggtaaccgctaggggcaagatgtgcctgca 517 ||||||| |||||||||||||| ||||| ||||| |||||||||| Sbjct: 132568 cagtgggtatctttaggtaaccactaggagcaaggtgtgcctgca 132524 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 512 cctgcacatagtttgaatatatctccagttgaatcagcacatcaacaaga 561 |||| |||||||||||||||||||||| || |||||| |||||| |||| Sbjct: 132423 cctgtacatagtttgaatatatctccaatttaatcagagcatcaataaga 132374
>ref|NM_115898.2| Arabidopsis thaliana palmitoyl-(protein) hydrolase AT3G60340 transcript variant AT3G60340.1 mRNA, complete cds Length = 1643 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 223 ctcaagccgatccagtcttcagtatatagctttgtctc 260 ||||| || ||||||||||||||||||||||| ||||| Sbjct: 858 ctcaaaccaatccagtcttcagtatatagcttggtctc 821
>ref|NM_180397.1| Arabidopsis thaliana palmitoyl-(protein) hydrolase AT3G60340 transcript variant AT3G60340.2 mRNA, complete cds Length = 1774 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 223 ctcaagccgatccagtcttcagtatatagctttgtctc 260 ||||| || ||||||||||||||||||||||| ||||| Sbjct: 989 ctcaaaccaatccagtcttcagtatatagcttggtctc 952
>gb|AY142494.1| Arabidopsis thaliana putative palmitoyl-protein thioesterase precursor (At3g60340) mRNA, complete cds Length = 1048 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 223 ctcaagccgatccagtcttcagtatatagctttgtctc 260 ||||| || ||||||||||||||||||||||| ||||| Sbjct: 767 ctcaaaccaatccagtcttcagtatatagcttggtctc 730
>gb|AY035032.1| Arabidopsis thaliana putative palmitoyl-protein thioesterase precursor (At3g60340) mRNA, complete cds Length = 1321 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 223 ctcaagccgatccagtcttcagtatatagctttgtctc 260 ||||| || ||||||||||||||||||||||| ||||| Sbjct: 953 ctcaaaccaatccagtcttcagtatatagcttggtctc 916
>emb|BX825693.1|CNS0A7JS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL56ZG08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1259 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 223 ctcaagccgatccagtcttcagtatatagctttgtctc 260 ||||| || ||||||||||||||||||||||| ||||| Sbjct: 962 ctcaaaccaatccagtcttcagtatatagcttggtctc 925
>emb|BX823241.1|CNS0A7KQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS15ZC02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1313 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 223 ctcaagccgatccagtcttcagtatatagctttgtctc 260 ||||| || ||||||||||||||||||||||| ||||| Sbjct: 988 ctcaaaccaatccagtcttcagtatatagcttggtctc 951
>emb|BX822721.1|CNS0A7MC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB5ZD07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1248 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 223 ctcaagccgatccagtcttcagtatatagctttgtctc 260 ||||| || ||||||||||||||||||||||| ||||| Sbjct: 987 ctcaaaccaatccagtcttcagtatatagcttggtctc 950
>emb|BX822496.1|CNS0A7MI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB41ZF01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1251 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 223 ctcaagccgatccagtcttcagtatatagctttgtctc 260 ||||| || ||||||||||||||||||||||| ||||| Sbjct: 924 ctcaaaccaatccagtcttcagtatatagcttggtctc 887
>emb|BX822334.1|CNS0A7LZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZA02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1269 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 223 ctcaagccgatccagtcttcagtatatagctttgtctc 260 ||||| || ||||||||||||||||||||||| ||||| Sbjct: 968 ctcaaaccaatccagtcttcagtatatagcttggtctc 931
>gb|AY087806.1| Arabidopsis thaliana clone 38539 mRNA, complete sequence Length = 1151 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 223 ctcaagccgatccagtcttcagtatatagctttgtctc 260 ||||| || ||||||||||||||||||||||| ||||| Sbjct: 796 ctcaaaccaatccagtcttcagtatatagcttggtctc 759
>emb|AL163852.1|ATF27H5 Arabidopsis thaliana DNA chromosome 3, BAC clone F27H5 Length = 88548 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 223 ctcaagccgatccagtcttcagtatatagctttgtct 259 ||||| || ||||||||||||||||||||||| |||| Sbjct: 81139 ctcaaaccaatccagtcttcagtatatagcttggtct 81103 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 289 ccatcaggataataaccaaaccatg 313 |||||||||||||| |||||||||| Sbjct: 80980 ccatcaggataatatccaaaccatg 80956
>emb|AL138646.2|ATT8B10 Arabidopsis thaliana DNA chromosome 3, BAC clone T8B10 Length = 103787 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 223 ctcaagccgatccagtcttcagtatatagctttgtct 259 ||||| || ||||||||||||||||||||||| |||| Sbjct: 7686 ctcaaaccaatccagtcttcagtatatagcttggtct 7650 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 289 ccatcaggataataaccaaaccatg 313 |||||||||||||| |||||||||| Sbjct: 7527 ccatcaggataatatccaaaccatg 7503
>gb|AC183493.1| Brassica oleracea Contig B, complete sequence Length = 284024 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 211 tcatccaaagtcctcaagccgatccagtcttcagtatatagctttgtct 259 |||||||| || |||| || ||||||||||| |||||||||||||||| Sbjct: 127372 tcatccaatgttttcaaaccaatccagtcttctgtatatagctttgtct 127420 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 413 ttggtatctcattattaagcttagg 437 ||||||||||||| ||||||||||| Sbjct: 127655 ttggtatctcattgttaagcttagg 127679
>ref|NM_115899.2| Arabidopsis thaliana ubiquitin-protein ligase AT3G60350 mRNA, complete cds Length = 3722 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 223 ctcaagccgatccagtcttcagtatatagct 253 ||||| || |||||||||||||||||||||| Sbjct: 3692 ctcaaaccaatccagtcttcagtatatagct 3722
>emb|BX823341.1|CNS0A7KR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS25ZA08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1310 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 223 ctcaagccgatccagtcttcagtatatagct 253 ||||| || |||||||||||||||||||||| Sbjct: 986 ctcaaaccaatccagtcttcagtatatagct 956 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 289 ccatcaggataataaccaaaccatg 313 |||||||||||||| |||||||||| Sbjct: 920 ccatcaggataatatccaaaccatg 896
>emb|BX833217.1|CNS09Z7L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL39ZF07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1062 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 465 tgtcatatcagtgggaatctttaggtaaccgctaggggcaagatgt 510 |||||||||||| ||||| || || ||||| ||||| ||||||||| Sbjct: 588 tgtcatatcagtaggaattttgagataaccactaggagcaagatgt 543 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 414 tggtatctcattattaagcttagg 437 |||||||||||| ||||||||||| Sbjct: 639 tggtatctcattgttaagcttagg 616
>gb|BT020483.1| Arabidopsis thaliana At5g47330 gene, complete cds Length = 974 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 465 tgtcatatcagtgggaatctttaggtaaccgctaggggcaagatg 509 |||||||||||| ||||| || || ||||| ||||| |||||||| Sbjct: 566 tgtcatatcagtaggaattttgagataaccactaggagcaagatg 522 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 414 tggtatctcattattaagcttagg 437 |||||||||||| ||||||||||| Sbjct: 617 tggtatctcattgttaagcttagg 594
>ref|NM_124104.2| Arabidopsis thaliana palmitoyl-(protein) hydrolase AT5G47330 mRNA, complete cds Length = 1120 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 465 tgtcatatcagtgggaatctttaggtaaccgctaggggcaagatg 509 |||||||||||| ||||| || || ||||| ||||| |||||||| Sbjct: 604 tgtcatatcagtaggaattttgagataaccactaggagcaagatg 560 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 414 tggtatctcattattaagcttagg 437 |||||||||||| ||||||||||| Sbjct: 655 tggtatctcattgttaagcttagg 632
>gb|BT020407.1| Arabidopsis thaliana At5g47330 mRNA, complete cds Length = 945 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 465 tgtcatatcagtgggaatctttaggtaaccgctaggggcaagatg 509 |||||||||||| ||||| || || ||||| ||||| |||||||| Sbjct: 540 tgtcatatcagtaggaattttgagataaccactaggagcaagatg 496 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 414 tggtatctcattattaagcttagg 437 |||||||||||| ||||||||||| Sbjct: 591 tggtatctcattgttaagcttagg 568
>ref|XM_508272.1| PREDICTED: Pan troglodytes similar to KIAA0298 protein (LOC451011), mRNA Length = 3585 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 tctcctgaggaggcagcacag 277 ||||||||||||||||||||| Sbjct: 2516 tctcctgaggaggcagcacag 2496
>gb|AC148089.8| Mus musculus chromosome 8, clone RP24-366L10, complete sequence Length = 178426 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 tctcctgaggaggcagcacag 277 ||||||||||||||||||||| Sbjct: 88681 tctcctgaggaggcagcacag 88701
>emb|AL390882.12| Human DNA sequence from clone RP11-113D19 on chromosome 9p21.2-22.3 Contains the IFNA21 gene for interferon, alpha 21, the IFNW1 gene for interferon, omega 1, an interferon, omega 1 (IFNW1) pseudogene, the IFNB1 gene for interferon, beta 1, fibroblast, an interferon, beta 1, fibroblast (IFNB1) pseudogene and a novel gene, possible otholog of mouse RIKEN cDNA 4933428I03 gene, complete sequence Length = 162064 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 383 atctttctttatatgtaatgt 403 ||||||||||||||||||||| Sbjct: 11612 atctttctttatatgtaatgt 11632
>emb|AJ400879.1|HSA400879 Homo sapiens ST5 gene for suppression of tumorigenicity 5, L27a gene for ribosomal protein L27a and KIAA0298 gene Length = 275434 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 tctcctgaggaggcagcacag 277 ||||||||||||||||||||| Sbjct: 258117 tctcctgaggaggcagcacag 258097
>emb|CR937025.1|PT027O15 Pan troglodytes chromosome 11 BAC PTB-027O15, complete sequence Length = 155399 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 atctttctttatatgtaatgt 403 ||||||||||||||||||||| Sbjct: 120364 atctttctttatatgtaatgt 120344
>ref|XM_940455.1| PREDICTED: Homo sapiens tripartite motif-containing 66 (TRIM66), mRNA Length = 6808 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 tctcctgaggaggcagcacag 277 ||||||||||||||||||||| Sbjct: 2792 tctcctgaggaggcagcacag 2772
>ref|XM_084529.8| PREDICTED: Homo sapiens tripartite motif-containing 66 (TRIM66), mRNA Length = 6808 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 tctcctgaggaggcagcacag 277 ||||||||||||||||||||| Sbjct: 2792 tctcctgaggaggcagcacag 2772
>emb|BX830972.1|CNS09ZIK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS44ZB12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1094 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 465 tgtcatatcagtgggaatctttaggtaaccgctaggggcaagatg 509 |||||||||||| ||||| || || ||||| ||||| |||||||| Sbjct: 596 tgtcatatcagtaggaattttgagataaccactaggagcaagatg 552 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 414 tggtatctcattattaagcttagg 437 |||||||||||| ||||||||||| Sbjct: 647 tggtatctcattgttaagcttagg 624
>gb|AC084110.4|AC084110 Arabidopsis thaliana chromosome 1 BAC F27G20 genomic sequence, complete sequence Length = 56310 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 385 ctttctttatatgtaatgttt 405 ||||||||||||||||||||| Sbjct: 50589 ctttctttatatgtaatgttt 50609
>gb|BT004170.1| Arabidopsis thaliana clone RAFL15-31-H22 (R20833) putative palmitoyl-protein thioesterase precursor (At5g47330) mRNA, complete cds Length = 1135 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 465 tgtcatatcagtgggaatctttaggtaaccgctaggggcaagatg 509 |||||||||||| ||||| || || ||||| ||||| |||||||| Sbjct: 604 tgtcatatcagtaggaattttgagataaccactaggagcaagatg 560 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 414 tggtatctcattattaagcttagg 437 |||||||||||| ||||||||||| Sbjct: 655 tggtatctcattgttaagcttagg 632
>gb|AC104360.8| Homo sapiens chromosome 11, clone RP11-691A5, complete sequence Length = 170211 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 tctcctgaggaggcagcacag 277 ||||||||||||||||||||| Sbjct: 125816 tctcctgaggaggcagcacag 125796
>gb|AC007767.3|F5D14 Sequence of BAC F5D14 from Arabidopsis thaliana chromosome 1, complete sequence Length = 127462 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 385 ctttctttatatgtaatgttt 405 ||||||||||||||||||||| Sbjct: 33088 ctttctttatatgtaatgttt 33108
>gb|AC155347.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH093K03, complete sequence Length = 78322 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 413 ttggtatctcattattaagcttagg 437 ||||||||||||| ||||||||||| Sbjct: 48100 ttggtatctcattgttaagcttagg 48124 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 211 tcatccaaagtcctcaagccgatccagtcttcagtatatagctttgtct 259 |||||||| || |||| || ||||| ||||| |||||||||||||||| Sbjct: 47817 tcatccaatgttttcaaaccaatccaatcttctgtatatagctttgtct 47865
>dbj|AB002296.2| Homo sapiens mRNA for KIAA0298 protein, partial cds Length = 6505 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 tctcctgaggaggcagcacag 277 ||||||||||||||||||||| Sbjct: 3076 tctcctgaggaggcagcacag 3056
>ref|NM_117850.2| Arabidopsis thaliana palmitoyl-(protein) hydrolase AT4G17470 mRNA, complete cds Length = 1168 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/40 (87%) Strand = Plus / Minus Query: 232 atccagtcttcagtatatagctttgtctcctgaggaggca 271 ||||| || ||||| ||||||||||||| |||||||||| Sbjct: 854 atccaatcctcagtgtatagctttgtcttttgaggaggca 815
>ref|NM_117852.2| Arabidopsis thaliana palmitoyl-(protein) hydrolase AT4G17483 mRNA, complete cds Length = 934 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 ataataaccaaaccatgctgtttc 320 |||||||||||||||||| ||||| Sbjct: 711 ataataaccaaaccatgcagtttc 688
>gb|AC153622.11| Mus musculus 6 BAC RP23-301N17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 195335 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 atctccagttgaatcagcac 551 |||||||||||||||||||| Sbjct: 18632 atctccagttgaatcagcac 18651
>gb|AC154510.2| Mus musculus BAC clone RP23-210I20 from chromosome 13, complete sequence Length = 186169 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 ttacctatcctcaatgtgacaaga 82 |||||| ||||||||||||||||| Sbjct: 123054 ttacctctcctcaatgtgacaaga 123077
>gb|AC007441.9| Drosophila melanogaster clone BACR10E03, complete sequence Length = 195212 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 ctaaatctttctttatatgtaatg 402 ||||||||||||||||||| |||| Sbjct: 130516 ctaaatctttctttatatgcaatg 130493
>gb|BT014278.1| Lycopersicon esculentum clone 133509R, mRNA sequence Length = 1174 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 232 atccagtcttcagtatatagctttgtct 259 ||||||||||| ||||| |||||||||| Sbjct: 784 atccagtcttctgtatacagctttgtct 757
>emb|CR848714.6| Wallaby DNA sequence from clone MEKBa-460J13, complete sequence Length = 186287 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 tgaggaggcagcacaggatt 281 |||||||||||||||||||| Sbjct: 63693 tgaggaggcagcacaggatt 63674
>emb|AL138707.10| Human DNA sequence from clone RP11-430M15 on chromosome 13 Contains the 3' end of a novel gene (FLJ22153) and the 3' end of the gene for a novel protein (ortholog of rat putative four repeat ion channel), complete sequence Length = 181311 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 caagatgtgcctgcacatag 522 |||||||||||||||||||| Sbjct: 24704 caagatgtgcctgcacatag 24723
>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome Length = 1522076 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 caagctgctaaatctttctt 391 |||||||||||||||||||| Sbjct: 935073 caagctgctaaatctttctt 935092
>emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 8 Length = 207674 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 ataataaccaaaccatgctgtttc 320 |||||||||||||||||| ||||| Sbjct: 112410 ataataaccaaaccatgcagtttc 112433
>gb|AY133699.1| Arabidopsis thaliana clone C103230 unknown protein (At4g17483) mRNA, complete cds Length = 934 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 ataataaccaaaccatgctgtttc 320 |||||||||||||||||| ||||| Sbjct: 711 ataataaccaaaccatgcagtttc 688
>emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 46 Length = 198788 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 ataataaccaaaccatgctgtttc 320 |||||||||||||||||| ||||| Sbjct: 101775 ataataaccaaaccatgcagtttc 101798
>emb|AJ632315.1| Cotesia congregata virus complete genome, segment Circle12 Length = 16103 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 472 tcagtgggaatctttaggtaaccg 495 ||||||||||| |||||||||||| Sbjct: 10164 tcagtgggaatttttaggtaaccg 10187
>gb|AC046176.13| Homo sapiens chromosome 8, clone RP11-446E9, complete sequence Length = 184349 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 tatgtaatgtttctttcact 413 |||||||||||||||||||| Sbjct: 110356 tatgtaatgtttctttcact 110375
>gb|AC093875.1| Homo sapiens BAC clone RP11-625B21 from 4, complete sequence Length = 180418 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 cttcaaataatctgtcatat 472 |||||||||||||||||||| Sbjct: 51553 cttcaaataatctgtcatat 51572
>gb|AC183494.1| Brassica oleracea Contig C, complete sequence Length = 285752 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 414 tggtatctcattattaagcttagg 437 |||||||||||| ||||||||||| Sbjct: 171683 tggtatctcattgttaagcttagg 171706
>gb|AC142245.14| Mus musculus chromosome 15, clone RP23-82J20, complete sequence Length = 242954 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 taaatctttctttatatgta 399 |||||||||||||||||||| Sbjct: 90703 taaatctttctttatatgta 90722
>gb|AC039057.8|AC039057 Homo sapiens chromosome 15 clone RP11-81G24 map 15q21.3, complete sequence Length = 174672 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 384 tctttctttatatgtaatgtttct 407 |||||||||||||||||| ||||| Sbjct: 135724 tctttctttatatgtaatatttct 135747
>gb|AC148710.1| Macaca mulatta Major Histocompatibility Complex BAC MMU399F22, complete sequence Length = 158818 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 ctttcacttggtatctcatt 425 |||||||||||||||||||| Sbjct: 154302 ctttcacttggtatctcatt 154283
>gb|AC148705.1| Macaca mulatta Major Histocompatibility Complex MMU348N13, complete sequence Length = 186491 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 ctttcacttggtatctcatt 425 |||||||||||||||||||| Sbjct: 151157 ctttcacttggtatctcatt 151138
>gb|AC148704.1| Macaca mulatta Major Histocompatibility Complex BAC MMU337E21, complete sequence Length = 147539 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 ctttcacttggtatctcatt 425 |||||||||||||||||||| Sbjct: 52627 ctttcacttggtatctcatt 52608
>gb|AC138512.4| Homo sapiens chromosome 16 clone RP11-93B18, complete sequence Length = 159064 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 tctttctttatatgtaatgt 403 |||||||||||||||||||| Sbjct: 76425 tctttctttatatgtaatgt 76406
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 ctttcacttggtatctcatt 425 |||||||||||||||||||| Sbjct: 1574896 ctttcacttggtatctcatt 1574915
>gb|BT022000.1| Arabidopsis thaliana At4g17470 gene, complete cds Length = 1050 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/40 (87%) Strand = Plus / Minus Query: 232 atccagtcttcagtatatagctttgtctcctgaggaggca 271 ||||| || ||||| ||||||||||||| |||||||||| Sbjct: 840 atccaatcctcagtgtatagctttgtcttttgaggaggca 801
>gb|AC159138.6| Mus musculus BAC RP23-315F23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 180124 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 atctccagttgaatcagcac 551 |||||||||||||||||||| Sbjct: 104662 atctccagttgaatcagcac 104681
>gb|AC018686.7| Homo sapiens BAC clone RP11-458M16 from 2, complete sequence Length = 223367 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 aaataatctgtcatatcagt 476 |||||||||||||||||||| Sbjct: 60748 aaataatctgtcatatcagt 60729
>gb|AC073947.46| Mus musculus strain C57BL/6J chromosome 9 clone rp23-80d20, complete sequence Length = 247089 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 atctccagttgaatcagcac 551 |||||||||||||||||||| Sbjct: 158629 atctccagttgaatcagcac 158610
>gb|AC078920.17| Homo sapiens 12 BAC RP11-121G22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 156323 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 404 ttctttcacttggtatctcattat 427 |||||||||||||| ||||||||| Sbjct: 136712 ttctttcacttggtctctcattat 136689
>dbj|AK175535.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-95-H05 Length = 1234 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 ataataaccaaaccatgctgtttc 320 |||||||||||||||||| ||||| Sbjct: 991 ataataaccaaaccatgcagtttc 968
>dbj|AB018117.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQL5 Length = 88398 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 414 tggtatctcattattaagcttagg 437 |||||||||||| ||||||||||| Sbjct: 56616 tggtatctcattgttaagcttagg 56593
>gb|AE003703.3| Drosophila melanogaster chromosome 3R, section 41 of 118 of the complete sequence Length = 223948 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 ctaaatctttctttatatgtaatg 402 ||||||||||||||||||| |||| Sbjct: 65420 ctaaatctttctttatatgcaatg 65397
>dbj|AP002364.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-121L10, complete sequence Length = 165703 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 cattattaagcttaggaaga 441 |||||||||||||||||||| Sbjct: 135832 cattattaagcttaggaaga 135813
>emb|CT573016.5| Mouse DNA sequence from clone RP23-78E16 on chromosome 13, complete sequence Length = 211097 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 ttacctatcctcaatgtgacaaga 82 |||||| ||||||||||||||||| Sbjct: 191711 ttacctctcctcaatgtgacaaga 191688
>emb|BX000352.8| Mouse DNA sequence from clone RP23-472K10 on chromosome X, complete sequence Length = 102363 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 400 atgtttctttcacttggtatctca 423 |||| ||||||||||||||||||| Sbjct: 77387 atgtctctttcacttggtatctca 77364
>gb|AC132471.4| Mus musculus BAC clone RP23-106E17 from 10, complete sequence Length = 197822 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 tatatgtaatgtttctttca 411 |||||||||||||||||||| Sbjct: 151156 tatatgtaatgtttctttca 151175
>emb|CT025680.8| Mouse DNA sequence from clone RP24-84H10 on chromosome 9, complete sequence Length = 243795 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 atctccagttgaatcagcac 551 |||||||||||||||||||| Sbjct: 97131 atctccagttgaatcagcac 97112
>gb|AC152164.14| Mus musculus chromosome 8, clone RP24-118N20, complete sequence Length = 185586 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 tctcctgaggaggcagcaca 276 |||||||||||||||||||| Sbjct: 121854 tctcctgaggaggcagcaca 121835 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,958,480 Number of Sequences: 3902068 Number of extensions: 4958480 Number of successful extensions: 84100 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 83 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83801 Number of HSP's gapped (non-prelim): 298 length of query: 561 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 538 effective length of database: 17,143,297,704 effective search space: 9223094164752 effective search space used: 9223094164752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)