ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26c19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479072.1| Oryza sativa (japonica cultivar-group), mRNA 103 5e-19
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
3dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
4dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
5dbj|AK066770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 5e-19
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.11
7gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 genom... 46 0.11
8gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genom... 46 0.11
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
10dbj|AK101797.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
11dbj|AK099879.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
12ref|NM_013077.1| Rattus norvegicus tubby homolog (mouse) (Tub), ... 44 0.42
13gb|AC173482.1| Mus musculus BAC clone RP23-383F20 from chromosom... 44 0.42
14dbj|AB011544.1| Rattus norvegicus mRNA for TUBBY protein, comple... 44 0.42
15ref|NM_001017140.2| Xenopus tropicalis hypothetical protein LOC5... 40 6.5
16gb|AY102285.1| Homo sapiens RTN4 (RTN4) gene, complete sequence,... 40 6.5
17gb|AC124127.12| Mus musculus chromosome 19, clone RP23-150N4, co... 40 6.5
18ref|XM_458620.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 6.5
19ref|XM_322144.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.5
20ref|XM_950709.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.5
21gb|AC113961.14| Mus musculus chromosome 19, clone RP23-18G1, com... 40 6.5
22gb|AC145805.2| Xenopus tropicalis clone CH216-85O8, complete seq... 40 6.5
23gb|AC131667.4| Mus musculus BAC clone RP23-290D15 from chromosom... 40 6.5
24emb|Z70036.1|CET01B4 Caenorhabditis elegans Cosmid T01B4, comple... 40 6.5
25gb|AC101882.14| Mus musculus chromosome 10, clone RP23-394M6, co... 40 6.5
26emb|AL160274.9| Human DNA sequence from clone RP11-395N21 on chr... 40 6.5
27emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS... 40 6.5
28gb|AC117474.7| Homo sapiens 3 BAC RP11-778P17 (Roswell Park Canc... 40 6.5
29emb|AJ720844.1| Gallus gallus mRNA for hypothetical protein, clo... 40 6.5
30ref|NM_001006488.1| Gallus gallus eukaryotic translation initiat... 40 6.5
31gb|AC093807.3| Homo sapiens BAC clone RP11-330J16 from 4, comple... 40 6.5
32ref|XM_678692.1| PREDICTED: Danio rerio similar to Serine/threon... 40 6.5
33ref|NM_078254.1| Caenorhabditis elegans TWiK family of potassium... 40 6.5
34gb|AC097473.3| Homo sapiens BAC clone RP11-75N20 from 4, complet... 40 6.5
35gb|AC013414.7| Homo sapiens BAC clone RP11-560I3 from 2, complet... 40 6.5
36gb|AF285860.1|AF285860 Wuchereria bancrofti 20/22kDa protein mRN... 40 6.5
37gb|AF322393.1| Mus musculus excitatory amino acid carrier (Slc1a... 40 6.5
38gb|AC155286.8| Mus musculus 10 BAC RP23-213N17 (Roswell Park Can... 40 6.5
39emb|BX255904.6| Zebrafish DNA sequence from clone DKEY-15J16 in ... 40 6.5
40emb|CR388170.5| Zebrafish DNA sequence from clone CH211-87E4 in ... 40 6.5
41emb|BX276086.4| Zebrafish DNA sequence from clone CH211-114C9 in... 40 6.5
42emb|CR760991.2| Xenopus tropicalis finished cDNA, clone TEgg055l14 40 6.5
43gb|AC163287.4| Mus musculus BAC clone RP23-279E21 from chromosom... 40 6.5 
>ref|XM_479072.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3136

 Score =  103 bits (52), Expect = 5e-19
 Identities = 67/72 (93%)
 Strand = Plus / Minus

                                                                        
Query: 411  atgttcatcttctgagctataatttcatttaccagatcgaacacaattctgcggtgaagc 470
            |||||||||||||||||| ||||||| |||||||||||||| |||||||| || ||||||
Sbjct: 2674 atgttcatcttctgagctgtaatttcgtttaccagatcgaatacaattcttcgatgaagc 2615

                        
Query: 471  ttttctgtgtta 482
            ||||||||||||
Sbjct: 2614 ttttctgtgtta 2603



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Minus

                                                                        
Query: 265  tttcatcctcatcctcttcggagcattttgctgccaaactctcggataggagccggtcaa 324
            |||||||| |||||||||| |||||||||   ||  ||||||| ||| | |||| |||||
Sbjct: 2820 tttcatccccatcctcttcagagcattttatcgctgaactctcagattgaagcctgtcaa 2761

                                           
Query: 325  cctctgtgcacaattccttgaaaagacgcca 355
            ||||||||||||  ||||| ||||| |||||
Sbjct: 2760 cctctgtgcacaggtccttaaaaagtcgcca 2730



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 86/105 (81%)
 Strand = Plus / Minus

                                                                        
Query: 57   catattcagtttatactactgaaagacagctgcctacgcaatttccattgtccagcttgc 116
            ||||||||| || ||||||| || |||||||||||    |  ||||| |||||| |||||
Sbjct: 3025 catattcagcttgtactactaaatgacagctgcctctttaggttccactgtccaccttgc 2966

                                                         
Query: 117  atcttctctgtagcctcgccacctataacctcgtcaatgaggtcc 161
            |||||| |||| |||||  | | ||| ||||||||||||||||||
Sbjct: 2965 atcttccctgtggcctcatcccatatgacctcgtcaatgaggtcc 2921
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  103 bits (52), Expect = 5e-19
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                            
Query: 411      atgttcatcttctgagctataatttcatttaccagatcgaacacaattctgcggtgaagc 470
                |||||||||||||||||| ||||||| |||||||||||||| |||||||| || ||||||
Sbjct: 24611208 atgttcatcttctgagctgtaatttcgtttaccagatcgaatacaattcttcgatgaagc 24611267

                            
Query: 471      ttttctgtgtta 482
                ||||||||||||
Sbjct: 24611268 ttttctgtgtta 24611279



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                            
Query: 265      tttcatcctcatcctcttcggagcattttgctgccaaactctcggataggagccggtcaa 324
                |||||||| |||||||||| |||||||||   ||  ||||||| ||| | |||| |||||
Sbjct: 24611062 tttcatccccatcctcttcagagcattttatcgctgaactctcagattgaagcctgtcaa 24611121

                                               
Query: 325      cctctgtgcacaattccttgaaaagacgcca 355
                ||||||||||||  ||||| ||||| |||||
Sbjct: 24611122 cctctgtgcacaggtccttaaaaagtcgcca 24611152



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 86/105 (81%)
 Strand = Plus / Plus

                                                                            
Query: 57       catattcagtttatactactgaaagacagctgcctacgcaatttccattgtccagcttgc 116
                ||||||||| || ||||||| || |||||||||||    |  ||||| |||||| |||||
Sbjct: 24610857 catattcagcttgtactactaaatgacagctgcctctttaggttccactgtccaccttgc 24610916

                                                             
Query: 117      atcttctctgtagcctcgccacctataacctcgtcaatgaggtcc 161
                |||||| |||| |||||  | | ||| ||||||||||||||||||
Sbjct: 24610917 atcttccctgtggcctcatcccatatgacctcgtcaatgaggtcc 24610961
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>dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0039M16
          Length = 133229

 Score =  103 bits (52), Expect = 5e-19
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                         
Query: 411   atgttcatcttctgagctataatttcatttaccagatcgaacacaattctgcggtgaagc 470
             |||||||||||||||||| ||||||| |||||||||||||| |||||||| || ||||||
Sbjct: 67275 atgttcatcttctgagctgtaatttcgtttaccagatcgaatacaattcttcgatgaagc 67334

                         
Query: 471   ttttctgtgtta 482
             ||||||||||||
Sbjct: 67335 ttttctgtgtta 67346



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                         
Query: 265   tttcatcctcatcctcttcggagcattttgctgccaaactctcggataggagccggtcaa 324
             |||||||| |||||||||| |||||||||   ||  ||||||| ||| | |||| |||||
Sbjct: 67129 tttcatccccatcctcttcagagcattttatcgctgaactctcagattgaagcctgtcaa 67188

                                            
Query: 325   cctctgtgcacaattccttgaaaagacgcca 355
             ||||||||||||  ||||| ||||| |||||
Sbjct: 67189 cctctgtgcacaggtccttaaaaagtcgcca 67219



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 86/105 (81%)
 Strand = Plus / Plus

                                                                         
Query: 57    catattcagtttatactactgaaagacagctgcctacgcaatttccattgtccagcttgc 116
             ||||||||| || ||||||| || |||||||||||    |  ||||| |||||| |||||
Sbjct: 66924 catattcagcttgtactactaaatgacagctgcctctttaggttccactgtccaccttgc 66983

                                                          
Query: 117   atcttctctgtagcctcgccacctataacctcgtcaatgaggtcc 161
             |||||| |||| |||||  | | ||| ||||||||||||||||||
Sbjct: 66984 atcttccctgtggcctcatcccatatgacctcgtcaatgaggtcc 67028
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>dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0018H10
          Length = 135879

 Score =  103 bits (52), Expect = 5e-19
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                          
Query: 411    atgttcatcttctgagctataatttcatttaccagatcgaacacaattctgcggtgaagc 470
              |||||||||||||||||| ||||||| |||||||||||||| |||||||| || ||||||
Sbjct: 104502 atgttcatcttctgagctgtaatttcgtttaccagatcgaatacaattcttcgatgaagc 104561

                          
Query: 471    ttttctgtgtta 482
              ||||||||||||
Sbjct: 104562 ttttctgtgtta 104573



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                          
Query: 265    tttcatcctcatcctcttcggagcattttgctgccaaactctcggataggagccggtcaa 324
              |||||||| |||||||||| |||||||||   ||  ||||||| ||| | |||| |||||
Sbjct: 104356 tttcatccccatcctcttcagagcattttatcgctgaactctcagattgaagcctgtcaa 104415

                                             
Query: 325    cctctgtgcacaattccttgaaaagacgcca 355
              ||||||||||||  ||||| ||||| |||||
Sbjct: 104416 cctctgtgcacaggtccttaaaaagtcgcca 104446



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 86/105 (81%)
 Strand = Plus / Plus

                                                                          
Query: 57     catattcagtttatactactgaaagacagctgcctacgcaatttccattgtccagcttgc 116
              ||||||||| || ||||||| || |||||||||||    |  ||||| |||||| |||||
Sbjct: 104151 catattcagcttgtactactaaatgacagctgcctctttaggttccactgtccaccttgc 104210

                                                           
Query: 117    atcttctctgtagcctcgccacctataacctcgtcaatgaggtcc 161
              |||||| |||| |||||  | | ||| ||||||||||||||||||
Sbjct: 104211 atcttccctgtggcctcatcccatatgacctcgtcaatgaggtcc 104255
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>dbj|AK066770.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088M15, full
            insert sequence
          Length = 3135

 Score =  103 bits (52), Expect = 5e-19
 Identities = 67/72 (93%)
 Strand = Plus / Minus

                                                                        
Query: 411  atgttcatcttctgagctataatttcatttaccagatcgaacacaattctgcggtgaagc 470
            |||||||||||||||||| ||||||| |||||||||||||| |||||||| || ||||||
Sbjct: 2672 atgttcatcttctgagctgtaatttcgtttaccagatcgaatacaattcttcgatgaagc 2613

                        
Query: 471  ttttctgtgtta 482
            ||||||||||||
Sbjct: 2612 ttttctgtgtta 2601



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 86/105 (81%)
 Strand = Plus / Minus

                                                                        
Query: 57   catattcagtttatactactgaaagacagctgcctacgcaatttccattgtccagcttgc 116
            ||||||||| || ||||||| || |||||||||||    |  ||||| |||||| |||||
Sbjct: 3024 catattcagcttgtactactaaatgacagctgcctctttaggttccactgtccaccttgc 2965

                                                         
Query: 117  atcttctctgtagcctcgccacctataacctcgtcaatgaggtcc 161
            |||||| |||| |||||  | | ||| ||||||||||||||||||
Sbjct: 2964 atcttccctgtggcctcatcccatatgacctcgtcaatgaggtcc 2920



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                        
Query: 265  tttcatcctcatcctcttcggagcattttgctgccaaactctcggataggagccggtcaa 324
            |||||||| |||||||||| |||||||||   ||  ||||||| ||| | |||| |||||
Sbjct: 2819 tttcatccccatcctcttcagagcattttatcgctgaactctcagattgaagcctgtcaa 2760

                        
Query: 325  cctctgtgcaca 336
            ||||||||||||
Sbjct: 2759 cctctgtgcaca 2748
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 339      tccttgaaaagacgccacccacttaacttccttga 373
                |||||||||||  ||||||||||||||||| ||||
Sbjct: 17238593 tccttgaaaagttgccacccacttaacttctttga 17238559
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>gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 genomic sequence, complete
             sequence
          Length = 115326

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 339   tccttgaaaagacgccacccacttaacttccttga 373
             |||||||||||  ||||||||||||||||| ||||
Sbjct: 71337 tccttgaaaagttgccacccacttaacttctttga 71303
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>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete
              sequence
          Length = 153247

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 339    tccttgaaaagacgccacccacttaacttccttga 373
              |||||||||||  ||||||||||||||||| ||||
Sbjct: 129958 tccttgaaaagttgccacccacttaacttctttga 129924
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 339      tccttgaaaagacgccacccacttaacttccttga 373
                |||||||||||  ||||||||||||||||| ||||
Sbjct: 17232134 tccttgaaaagttgccacccacttaacttctttga 17232100
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>dbj|AK101797.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066F10, full
            insert sequence
          Length = 3310

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 339  tccttgaaaagacgccacccacttaacttccttga 373
            |||||||||||  ||||||||||||||||| ||||
Sbjct: 2864 tccttgaaaagttgccacccacttaacttctttga 2830
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>dbj|AK099879.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111J07, full
            insert sequence
          Length = 3203

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 339  tccttgaaaagacgccacccacttaacttccttga 373
            |||||||||||  ||||||||||||||||| ||||
Sbjct: 2802 tccttgaaaagttgccacccacttaacttctttga 2768
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>ref|NM_013077.1| Rattus norvegicus tubby homolog (mouse) (Tub), mRNA
          Length = 1582

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 262 tgttttcatcctcatcctcttc 283
           ||||||||||||||||||||||
Sbjct: 617 tgttttcatcctcatcctcttc 596
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>gb|AC173482.1| Mus musculus BAC clone RP23-383F20 from chromosome 14, complete sequence
          Length = 216037

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 401    agagctatagatgttcatcttctgag 426
              |||||||||||| |||||||||||||
Sbjct: 106921 agagctatagattttcatcttctgag 106896
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>dbj|AB011544.1| Rattus norvegicus mRNA for TUBBY protein, complete cds
          Length = 1582

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 262 tgttttcatcctcatcctcttc 283
           ||||||||||||||||||||||
Sbjct: 617 tgttttcatcctcatcctcttc 596
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>ref|NM_001017140.2| Xenopus tropicalis hypothetical protein LOC549894 (LOC549894), mRNA
          Length = 1122

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 ttttcatcctcatcctcttc 283
           ||||||||||||||||||||
Sbjct: 615 ttttcatcctcatcctcttc 596
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>gb|AY102285.1| Homo sapiens RTN4 (RTN4) gene, complete sequence, alternatively spliced
          Length = 90756

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 227   tttcatctcatacaatgcat 246
             ||||||||||||||||||||
Sbjct: 66206 tttcatctcatacaatgcat 66187
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>gb|AC124127.12| Mus musculus chromosome 19, clone RP23-150N4, complete sequence
          Length = 194548

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   caatgaggtccctgaaaatg 170
             ||||||||||||||||||||
Sbjct: 18627 caatgaggtccctgaaaatg 18646
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>ref|XM_458620.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D04213g)
           partial mRNA
          Length = 2490

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 148 cgtcaatgaggtccctgaaa 167
           ||||||||||||||||||||
Sbjct: 270 cgtcaatgaggtccctgaaa 289
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>ref|XM_322144.1| Neurospora crassa OR74A hypothetical protein (NCU00059.1) partial
            mRNA
          Length = 2490

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  atgttttcatcctcatcctc 280
            ||||||||||||||||||||
Sbjct: 1976 atgttttcatcctcatcctc 1957
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>ref|XM_950709.1| Neurospora crassa OR74A hypothetical protein (NCU00059.1) partial
            mRNA
          Length = 2490

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  atgttttcatcctcatcctc 280
            ||||||||||||||||||||
Sbjct: 1976 atgttttcatcctcatcctc 1957
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>gb|AC113961.14| Mus musculus chromosome 19, clone RP23-18G1, complete sequence
          Length = 256791

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    caatgaggtccctgaaaatg 170
              ||||||||||||||||||||
Sbjct: 163342 caatgaggtccctgaaaatg 163361
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>gb|AC145805.2| Xenopus tropicalis clone CH216-85O8, complete sequence
          Length = 166207

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   tatgttttcatcctcatcct 279
             ||||||||||||||||||||
Sbjct: 84525 tatgttttcatcctcatcct 84544
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>gb|AC131667.4| Mus musculus BAC clone RP23-290D15 from chromosome 10, complete
             sequence
          Length = 196233

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 56    tcatattcagtttatactactgaa 79
             |||| |||||||||||||||||||
Sbjct: 53081 tcatgttcagtttatactactgaa 53058
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>emb|Z70036.1|CET01B4 Caenorhabditis elegans Cosmid T01B4, complete sequence
          Length = 34581

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   ttttcatcctcatcctcttc 283
             ||||||||||||||||||||
Sbjct: 27609 ttttcatcctcatcctcttc 27590
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>gb|AC101882.14| Mus musculus chromosome 10, clone RP23-394M6, complete sequence
          Length = 209838

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 405   ctatagatgttcatcttctg 424
             ||||||||||||||||||||
Sbjct: 29949 ctatagatgttcatcttctg 29968
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>emb|AL160274.9| Human DNA sequence from clone RP11-395N21 on chromosome 9 Contains
            the 3' end of the UNC13 gene for unc-13-like (C.
            elegans)(MUNC13, hmunc13) and the 5' end of a novel gene,
            complete sequence
          Length = 144102

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 249  tcagataatggtatgttttc 268
            ||||||||||||||||||||
Sbjct: 9114 tcagataatggtatgttttc 9095
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>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces
              hansenii
          Length = 1602771

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 148    cgtcaatgaggtccctgaaa 167
              ||||||||||||||||||||
Sbjct: 299898 cgtcaatgaggtccctgaaa 299917
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>gb|AC117474.7| Homo sapiens 3 BAC RP11-778P17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 144160

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     tactgaaagacagctgccta 92
              ||||||||||||||||||||
Sbjct: 119814 tactgaaagacagctgccta 119833
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>emb|AJ720844.1| Gallus gallus mRNA for hypothetical protein, clone 27j21
          Length = 1908

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 260  tatgttttcatcctcatcctcttc 283
            |||||||||||| |||||||||||
Sbjct: 1494 tatgttttcatcttcatcctcttc 1471
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>ref|NM_001006488.1| Gallus gallus eukaryotic translation initiation factor 5 (EIF5), mRNA
          Length = 1908

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 260  tatgttttcatcctcatcctcttc 283
            |||||||||||| |||||||||||
Sbjct: 1494 tatgttttcatcttcatcctcttc 1471
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>gb|AC093807.3| Homo sapiens BAC clone RP11-330J16 from 4, complete sequence
          Length = 171415

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    tcagtttatactactgaaag 81
             ||||||||||||||||||||
Sbjct: 18541 tcagtttatactactgaaag 18560
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>ref|XM_678692.1| PREDICTED: Danio rerio similar to Serine/threonine-protein kinase
            Nek1 (NimA-related protein kinase 1) (NY-REN-55 antigen)
            (LOC556002), mRNA
          Length = 3624

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  atgttttcatcctcatcctc 280
            ||||||||||||||||||||
Sbjct: 3476 atgttttcatcctcatcctc 3457
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>ref|NM_078254.1| Caenorhabditis elegans TWiK family of potassium channels family
            member (twk-22) (twk-22) mRNA, complete cds
          Length = 2274

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 264  ttttcatcctcatcctcttc 283
            ||||||||||||||||||||
Sbjct: 2261 ttttcatcctcatcctcttc 2242
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>gb|AC097473.3| Homo sapiens BAC clone RP11-75N20 from 4, complete sequence
          Length = 150573

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    atgaggtccctgaaaatgga 172
              ||||||||||||||||||||
Sbjct: 105291 atgaggtccctgaaaatgga 105310
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>gb|AC013414.7| Homo sapiens BAC clone RP11-560I3 from 2, complete sequence
          Length = 161390

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 227    tttcatctcatacaatgcat 246
              ||||||||||||||||||||
Sbjct: 151581 tttcatctcatacaatgcat 151600
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>gb|AF285860.1|AF285860 Wuchereria bancrofti 20/22kDa protein mRNA, complete cds
          Length = 558

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 ttttcatcctcatcctcttc 283
           ||||||||||||||||||||
Sbjct: 278 ttttcatcctcatcctcttc 259
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>gb|AF322393.1| Mus musculus excitatory amino acid carrier (Slc1a1) gene, partial cds,
             alternatively spliced
          Length = 25407

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   caatgaggtccctgaaaatg 170
             ||||||||||||||||||||
Sbjct: 18803 caatgaggtccctgaaaatg 18784
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>gb|AC155286.8| Mus musculus 10 BAC RP23-213N17 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 219072

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 405   ctatagatgttcatcttctg 424
             ||||||||||||||||||||
Sbjct: 52308 ctatagatgttcatcttctg 52289
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>emb|BX255904.6| Zebrafish DNA sequence from clone DKEY-15J16 in linkage group 20,
             complete sequence
          Length = 228691

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   atgttttcatcctcatcctc 280
             ||||||||||||||||||||
Sbjct: 34702 atgttttcatcctcatcctc 34683
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>emb|CR388170.5| Zebrafish DNA sequence from clone CH211-87E4 in linkage group 20,
              complete sequence
          Length = 174079

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    atgttttcatcctcatcctc 280
              ||||||||||||||||||||
Sbjct: 137278 atgttttcatcctcatcctc 137297
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>emb|BX276086.4| Zebrafish DNA sequence from clone CH211-114C9 in linkage group 20,
             complete sequence
          Length = 172431

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   atgttttcatcctcatcctc 280
             ||||||||||||||||||||
Sbjct: 37853 atgttttcatcctcatcctc 37834
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>emb|CR760991.2| Xenopus tropicalis finished cDNA, clone TEgg055l14
          Length = 1122

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 ttttcatcctcatcctcttc 283
           ||||||||||||||||||||
Sbjct: 615 ttttcatcctcatcctcttc 596
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>gb|AC163287.4| Mus musculus BAC clone RP23-279E21 from chromosome 8, complete sequence
          Length = 201346

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    aatgaggtccctgaaaatgg 171
              ||||||||||||||||||||
Sbjct: 142636 aatgaggtccctgaaaatgg 142655


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,021,821
Number of Sequences: 3902068
Number of extensions: 4021821
Number of successful extensions: 76801
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76651
Number of HSP's gapped (non-prelim): 150
length of query: 484
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 462
effective length of database: 17,147,199,772
effective search space: 7922006294664
effective search space used: 7922006294664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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