Clone Name | rbasd25n17 |
---|---|
Clone Library Name | barley_pub |
>B2_DAUCA (P37707) B2 protein| Length = 207 Score = 154 bits (388), Expect = 3e-37 Identities = 69/92 (75%), Positives = 82/92 (89%) Frame = -3 Query: 643 LYNYTTHQLHGVFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRRLCKALEEDAFR 464 LYNY+THQLHGVFEAASFGG+NIDPTAWEDKK +GESRFPAQVR+ R++C+ LEED+FR Sbjct: 116 LYNYSTHQLHGVFEAASFGGTNIDPTAWEDKKNQGESRFPAQVRVMTRKICEPLEEDSFR 175 Query: 463 PVLHHYDGPKFRLELSIAETLSLLDLCKSEDA 368 P+LHHYDGPKFRLEL+I E +SLLD+ + A Sbjct: 176 PILHHYDGPKFRLELNIPEAISLLDIFEETKA 207
>ALDO1_ARATH (Q7G193) Aldehyde oxidase 1 (EC 1.2.3.1) (AtAO-1) (AtAO1)| Length = 1368 Score = 32.3 bits (72), Expect = 1.2 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 13/74 (17%) Frame = -3 Query: 490 KALEEDAFRPV-------LHHYDGPKFRLELS-IAETLSLLDLCKSEDA*SA-----SEH 350 KA++ED + + +G +F LELS I + +L+D +++ + E Sbjct: 4 KAIDEDKVEAMKSSKTSLVFAINGQRFELELSSIDPSTTLVDFLRNKTPFKSVKLGCGEG 63 Query: 349 GCGCSVVLFSKYHP 308 GCG VVL SKY P Sbjct: 64 GCGACVVLLSKYDP 77
>AROK_XYLFA (Q9PDP4) Shikimate kinase (EC 2.7.1.71) (SK)| Length = 180 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/52 (30%), Positives = 28/52 (53%) Frame = -3 Query: 598 ASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRRLCKALEEDAFRPVLHHYD 443 A+ GG+ +DP E+++C E F ++I + + L D +RP+L D Sbjct: 79 ATGGGTILDP---ENRRCMQERGFVVFLKINVNTQLERLAHDRYRPLLQQID 127
>IRG1_MOUSE (P54987) Immune-responsive protein 1 (Fragment)| Length = 646 Score = 31.6 bits (70), Expect = 2.1 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +1 Query: 178 HLRGLLLPSTRSFLGEMQPPTNSLRFHGRRTEQNIVKTSSTTYR 309 H G LL + L +++ P +G+R N++KTS TT++ Sbjct: 589 HCFGFLLHLPSNELSKVESPETETSVYGKRLVYNLIKTSPTTFK 632
>ALDO2_ARATH (Q7G192) Aldehyde oxidase 2 (EC 1.2.3.1) (AtAO-2) (AtAO3)| Length = 1321 Score = 30.8 bits (68), Expect = 3.6 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 6/52 (11%) Frame = -3 Query: 445 DGPKFRLELSIAE-TLSLLDLCKSEDA*-----SASEHGCGCSVVLFSKYHP 308 +G +F LELS + + +LL+ + + + S E GCG VVL SK+ P Sbjct: 8 NGQRFELELSSVDPSTTLLEFLRYQTSFKSVKLSCGEGGCGACVVLLSKFDP 59
>ALDO4_ARATH (Q7G191) Aldehyde oxidase 4 (EC 1.2.3.1) (AtAO-4) (AtAO2)| Length = 1337 Score = 30.4 bits (67), Expect = 4.7 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%) Frame = -3 Query: 445 DGPKFRLELSIAETLSLLDLCKSEDA*-----SASEHGCGCSVVLFSKYHP 308 +G KF + LS+ + +LL+ +S S E GCG +V+ SKY P Sbjct: 11 NGEKFEV-LSVNPSTTLLEFLRSNTCFKSVKLSCGEGGCGACIVILSKYDP 60
>APBB3_HUMAN (O95704) Amyloid beta A4 precursor protein-binding family B member| 3 (Fe65-like protein 2) (Fe65L2) Length = 486 Score = 30.0 bits (66), Expect = 6.1 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 2/86 (2%) Frame = +1 Query: 10 PPSLWGIHDASQQYPPHLSGGFPRWRRAYCTTNT*IRRTYRSPRLRTNGTNTETGSHLRG 189 PP IHDA+ Y H+ G +W+R T+ GT TE + G Sbjct: 32 PPGWRKIHDAAGTYYWHVPSGSTQWQRP----------TWELGDAEDPGTGTE---GIWG 78 Query: 190 LLLPSTRSF--LGEMQPPTNSLRFHG 261 L P RSF L +NSL ++G Sbjct: 79 LRPPKGRSFSSLESSLDRSNSLSWYG 104
>AROC_SYNEL (Q8DLM1) Chorismate synthase (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase) Length = 363 Score = 29.6 bits (65), Expect = 8.0 Identities = 21/68 (30%), Positives = 33/68 (48%) Frame = +3 Query: 18 TLGHS*CITTVSPPSFGGVSPLAAGILHYKYINKENIQITEITDERHQHRDRLTS*RPTS 197 T GH +TT GGV + G +++ +IQ + D R + RLT+ R S Sbjct: 4 TFGHLFRVTTFGESHGGGVGVVVDGCPPRLELSEVDIQ--KELDRRRPGQSRLTTPRQES 61 Query: 198 SKYQVLSG 221 + ++LSG Sbjct: 62 DRCEILSG 69 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 110,848,561 Number of Sequences: 219361 Number of extensions: 2552452 Number of successful extensions: 6203 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 5959 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6197 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6029593548 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)