>ref|NM_191035.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2604

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 250  cttctcccgatcttccattttgctga 275
            ||||||||||||||||| ||||||||
Sbjct: 979  cttctcccgatcttccactttgctga 1004

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 250      cttctcccgatcttccattttgctga 275
                ||||||||||||||||| ||||||||
Sbjct: 34425915 cttctcccgatcttccactttgctga 34425890



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 451      ccgctcatcaacgcgttcgag 471
                |||||||||||||||||||||
Sbjct: 34434626 ccgctcatcaacgcgttcgag 34434606



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 451      ccgctcatcaacgcgttcgagatatactcgct 482
                |||||||||||||| |||||| | ||||||||
Sbjct: 34456613 ccgctcatcaacgcattcgaggtgtactcgct 34456582

>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0468B07
          Length = 169071

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 250    cttctcccgatcttccattttgctga 275
              ||||||||||||||||| ||||||||
Sbjct: 108259 cttctcccgatcttccactttgctga 108234



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 451    ccgctcatcaacgcgttcgag 471
              |||||||||||||||||||||
Sbjct: 116970 ccgctcatcaacgcgttcgag 116950



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 451    ccgctcatcaacgcgttcgagatatactcgct 482
              |||||||||||||| |||||| | ||||||||
Sbjct: 138957 ccgctcatcaacgcattcgaggtgtactcgct 138926

>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0425G02
          Length = 155432

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 250  cttctcccgatcttccattttgctga 275
            ||||||||||||||||| ||||||||
Sbjct: 1634 cttctcccgatcttccactttgctga 1609



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 451   ccgctcatcaacgcgttcgag 471
             |||||||||||||||||||||
Sbjct: 10345 ccgctcatcaacgcgttcgag 10325



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 451   ccgctcatcaacgcgttcgagatatactcgct 482
             |||||||||||||| |||||| | ||||||||
Sbjct: 32332 ccgctcatcaacgcattcgaggtgtactcgct 32301

>ref|NM_191037.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2352

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 451  ccgctcatcaacgcgttcgag 471
            |||||||||||||||||||||
Sbjct: 1216 ccgctcatcaacgcgttcgag 1236

>gb|BC008159.1| Mus musculus hedgehog acyltransferase, mRNA (cDNA clone MGC:11697
            IMAGE:3963716), complete cds
          Length = 1832

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 626  tggtggtcttgtggggagaggggccgggc 654
            |||||| |||||||||||||| |||||||
Sbjct: 1565 tggtgggcttgtggggagaggtgccgggc 1537

>gb|AC115917.10| Mus musculus chromosome 1, clone RP24-488H6, complete sequence
          Length = 186588

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 626   tggtggtcttgtggggagaggggccgggc 654
             |||||| |||||||||||||| |||||||
Sbjct: 51725 tggtgggcttgtggggagaggtgccgggc 51753

>dbj|AK134661.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length
            enriched library, clone:6330519H08 product:Similar to
            melanoma antigen recognized by T cells 2 homolog [Mus
            musculus], full insert sequence
          Length = 1645

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 626  tggtggtcttgtggggagaggggccgggc 654
            |||||| |||||||||||||| |||||||
Sbjct: 1415 tggtgggcttgtggggagaggtgccgggc 1387

>dbj|AK172126.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830043G03 product:Similar to melanoma
            antigen recognized BY T cells 2 homolog, full insert
            sequence
          Length = 2714

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 626  tggtggtcttgtggggagaggggccgggc 654
            |||||| |||||||||||||| |||||||
Sbjct: 1418 tggtgggcttgtggggagaggtgccgggc 1390

>dbj|AK028230.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:2810432O22 product:SIMILAR TO
            MELANOMA ANTIGEN RECOGNIZED BY T CELLS 2 homolog [Mus
            musculus], full insert sequence
          Length = 2639

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 626  tggtggtcttgtggggagaggggccgggc 654
            |||||| |||||||||||||| |||||||
Sbjct: 1374 tggtgggcttgtggggagaggtgccgggc 1346

>dbj|AK109802.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-F08, full
           insert sequence
          Length = 1645

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 451 ccgctcatcaacgcgttcgag 471
           |||||||||||||||||||||
Sbjct: 590 ccgctcatcaacgcgttcgag 570

>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 355     cttttacaggccaacagcttg 375
               |||||||||||||||||||||
Sbjct: 2868391 cttttacaggccaacagcttg 2868371

>ref|NM_144881.2| Mus musculus hedgehog acyltransferase (Hhat), mRNA
          Length = 2639

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 626  tggtggtcttgtggggagaggggccgggc 654
            |||||| |||||||||||||| |||||||
Sbjct: 1374 tggtgggcttgtggggagaggtgccgggc 1346

>ref|NM_191040.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2607

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 451  ccgctcatcaacgcgttcgagatatactcgct 482
            |||||||||||||| |||||| | ||||||||
Sbjct: 1141 ccgctcatcaacgcattcgaggtgtactcgct 1172

>gb|CP000321.1| Nitrobacter hamburgensis X14 plasmid 2, complete sequence
          Length = 188318

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 451    ccgctcatcaacgcgttcga 470
              ||||||||||||||||||||
Sbjct: 114274 ccgctcatcaacgcgttcga 114255

>gb|AC011392.5| Homo sapiens chromosome 5 clone CTB-178C5, complete sequence
          Length = 64105

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 198   ctccatgtggcttaccatggaaaa 221
             ||||||||||| ||||||||||||
Sbjct: 32182 ctccatgtggcataccatggaaaa 32159

>gb|AC090744.5| Homo sapiens chromosome 11, clone RP11-660K15, complete sequence
          Length = 195434

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 362   aggccaacagcttgtatgac 381
             ||||||||||||||||||||
Sbjct: 31306 aggccaacagcttgtatgac 31325

>gb|AF325554.2|AF325554 Ralstonia eutropha strain HF39 methylcitrate pathway gene cluster,
            complete sequence
          Length = 10526

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 157  gccatcttccaggaagccatgacc 180
            |||||||||| |||||||||||||
Sbjct: 2811 gccatcttcccggaagccatgacc 2834

>gb|AC068329.8| Homo sapiens chromosome 11, clone RP11-82N10, complete sequence
          Length = 185347

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 362    aggccaacagcttgtatgac 381
              ||||||||||||||||||||
Sbjct: 100921 aggccaacagcttgtatgac 100902

>gb|AF247002.2|AF247002 Rattus norvegicus unknown mRNA
          Length = 683

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 2   ttcccttgtcttttgtgtac 21
           ||||||||||||||||||||
Sbjct: 140 ttcccttgtcttttgtgtac 159

>gb|AC095057.3| Homo sapiens BAC clone RP11-395I6 from 4, complete sequence
          Length = 163527

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   gccatcttccaggaagccat 176
             ||||||||||||||||||||
Sbjct: 65070 gccatcttccaggaagccat 65051

>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 623     cggtggtggtcttgtgggga 642
               ||||||||||||||||||||
Sbjct: 2000325 cggtggtggtcttgtgggga 2000344

>gb|AY108207.1| Zea mays PCO082315 mRNA sequence
          Length = 1199

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 85  cccttgatcaacctgaacactagc 108
           ||||||||||||| ||||||||||
Sbjct: 526 cccttgatcaaccggaacactagc 503


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,227,299
Number of Sequences: 3902068
Number of extensions: 4227299
Number of successful extensions: 77556
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77435
Number of HSP's gapped (non-prelim): 121
length of query: 686
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 663
effective length of database: 17,143,297,704
effective search space: 11366006377752
effective search space used: 11366006377752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)