ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26c05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GLRX5_SCHPO (O74790) Monothiol glutaredoxin-5 39 0.011
2TXNL2_HUMAN (O76003) Thioredoxin-like protein 2 (PKC-interacting... 37 0.032
3GLRX3_YEAST (Q03835) Monothiol glutaredoxin-3 37 0.032
4GLRX4_YEAST (P32642) Monothiol glutaredoxin-4 37 0.055
5TXNL2_RAT (Q9JLZ1) Thioredoxin-like 2 protein (PKC-interacting c... 36 0.071
6TXNL2_MOUSE (Q9CQM9) Thioredoxin-like protein 2 (PKC-interacting... 36 0.071
7GLRX4_SCHPO (Q9HDW8) Monothiol glutaredoxin-4 36 0.093
8Y1846_SYNY3 (P73056) Hypothetical UPF0055 protein slr1846 36 0.093
9ATL3K_ARATH (Q9M313) RING-H2 finger protein ATL3K 34 0.27
10GLRX5_MOUSE (Q80Y14) Glutaredoxin-related protein 5 34 0.35
11GLRX5_HUMAN (Q86SX6) Glutaredoxin-related protein 5 34 0.35
12GLRXA_LEGPH (Q48833) Probable monothiol glutaredoxin grlA 33 0.79
13TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chlo... 33 0.79
14ATL2M_ARATH (O82353) RING-H2 finger protein ATL2M 32 1.0
15ATL4H_ARATH (P0C041) Putative RING-H2 finger protein ATL4H 32 1.8
16GLRXA_RICCN (Q92GH5) Probable monothiol glutaredoxin grlA 32 1.8
17ATL1A_ARATH (P93823) RING-H2 finger protein ATL1A 32 1.8
18Y187_BUCAI (P57284) Hypothetical monothiol glutaredoxin BU187 31 2.3
19ZC11A_MOUSE (Q6NZF1) Zinc finger CCCH-type domain-containing pro... 31 2.3
20YDHD_SHIFL (P0AC72) Probable monothiol glutaredoxin ydhD 31 3.0
21YDHD_ECOLI (P0AC69) Probable monothiol glutaredoxin ydhD 31 3.0
22YDHD_ECOL6 (P0AC70) Probable monothiol glutaredoxin ydhD 31 3.0
23YDHD_ECO57 (P0AC71) Probable monothiol glutaredoxin ydhD 31 3.0
24ZC11A_CHICK (Q5ZJJ1) Zinc finger CCCH-type domain-containing pro... 31 3.0
25ATL3A_ARATH (Q9SRQ8) RING-H2 finger protein ATL3A 31 3.0
26HIPK2_MESAU (Q9WUM7) Homeodomain-interacting protein kinase 2 (E... 31 3.0
27GLRXA_RICPR (O05957) Probable monothiol glutaredoxin grlA 31 3.0
28ZC11A_HUMAN (O75152) Zinc finger CCCH-type domain-containing pro... 30 3.9
29ZC11A_PONPY (Q5REG6) Zinc finger CCCH-type domain-containing pro... 30 3.9
30ATL4L_ARATH (Q9ZT49) RING-H2 finger protein ATL4L (RING-H2 zinc ... 30 5.1
31AT11A_HUMAN (P98196) Probable phospholipid-transporting ATPase I... 30 5.1
32TPT_FLATR (P49132) Triose phosphate/phosphate translocator, chlo... 30 5.1
33ATL2G_ARATH (O64763) RING-H2 finger protein ATL2G precursor (RIN... 30 5.1
34ATL5G_ARATH (Q9LF64) Probable RING-H2 finger protein ATL5G 30 6.7
35ATL5K_ARATH (Q9LSW9) RING-H2 finger protein ATL5K (RING-H2 finge... 30 6.7
36ACH3_CAEEL (P54244) Acetylcholine receptor, alpha-type subunit d... 30 6.7
37ATL1F_ARATH (Q9LQM2) Putative RING-H2 finger protein ATL1F precu... 30 6.7
38ATL2J_ARATH (O80927) RING-H2 finger protein ATL2J 29 8.7
39YZ73_CAEEL (Q19297) Hypothetical protein F10D7.3 in chromosome X 29 8.7

>GLRX5_SCHPO (O74790) Monothiol glutaredoxin-5|
          Length = 244

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 15/32 (46%), Positives = 24/32 (75%)
 Frame = -2

Query: 190 MLVNEALHQGLEMYSSRPIFPKFYIDGEFFGG 95
           +L ++++ QGL+++S  P FP+ YI GEF GG
Sbjct: 194 ILADDSVRQGLKVFSDWPTFPQLYIKGEFVGG 225



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>TXNL2_HUMAN (O76003) Thioredoxin-like protein 2 (PKC-interacting cousin of|
           thioredoxin) (PKC-theta-interacting protein)
           (PKCq-interacting protein)
          Length = 335

 Score = 37.4 bits (85), Expect = 0.032
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -2

Query: 211 IMSSLDEMLVNEALHQGLEMYSSRPIFPKFYIDGEFFGG 95
           I  S  ++  +E + QGL+ YSS P +P+ Y+ GE  GG
Sbjct: 174 IQFSSFDIFSDEEVRQGLKAYSSWPTYPQLYVSGELIGG 212



 Score = 36.6 bits (83), Expect = 0.055
 Identities = 14/33 (42%), Positives = 23/33 (69%)
 Frame = -2

Query: 193 EMLVNEALHQGLEMYSSRPIFPKFYIDGEFFGG 95
           ++L +E + QGL+ YS+ P +P+ Y+ GE  GG
Sbjct: 282 DILEDEEVRQGLKAYSNWPTYPQLYVKGELVGG 314



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>GLRX3_YEAST (Q03835) Monothiol glutaredoxin-3|
          Length = 285

 Score = 37.4 bits (85), Expect = 0.032
 Identities = 16/40 (40%), Positives = 26/40 (65%)
 Frame = -2

Query: 214 QIMSSLDEMLVNEALHQGLEMYSSRPIFPKFYIDGEFFGG 95
           Q+     ++L +E++ Q L+ +S  P FP+ YI+GEF GG
Sbjct: 225 QVRFGFFDILRDESVRQNLKKFSEWPTFPQLYINGEFQGG 264



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>GLRX4_YEAST (P32642) Monothiol glutaredoxin-4|
          Length = 244

 Score = 36.6 bits (83), Expect = 0.055
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = -2

Query: 214 QIMSSLDEMLVNEALHQGLEMYSSRPIFPKFYIDGEFFGG 95
           QI     ++L +E + Q L+ +S  P FP+ YI+GEF GG
Sbjct: 185 QIRFGFFDILRDENVRQSLKKFSDWPTFPQLYINGEFQGG 224



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>TXNL2_RAT (Q9JLZ1) Thioredoxin-like 2 protein (PKC-interacting cousin of|
           thioredoxin) (PKCq-interacting protein)
           (PKC-theta-interacting protein)
          Length = 337

 Score = 36.2 bits (82), Expect = 0.071
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = -2

Query: 211 IMSSLDEMLVNEALHQGLEMYSSRPIFPKFYIDGEFFGG 95
           I  S  ++  +E + QGL+ YS+ P +P+ Y+ GE  GG
Sbjct: 176 IQFSSFDIFSDEEVRQGLKTYSNWPTYPQLYVSGELIGG 214



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>TXNL2_MOUSE (Q9CQM9) Thioredoxin-like protein 2 (PKC-interacting cousin of|
           thioredoxin) (PKC-theta-interacting protein)
           (PKCq-interacting protein)
          Length = 337

 Score = 36.2 bits (82), Expect = 0.071
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = -2

Query: 211 IMSSLDEMLVNEALHQGLEMYSSRPIFPKFYIDGEFFGG 95
           I  S  ++  +E + QGL+ YS+ P +P+ Y+ GE  GG
Sbjct: 176 IQFSSFDIFSDEEVRQGLKTYSNWPTYPQLYVSGELIGG 214



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>GLRX4_SCHPO (Q9HDW8) Monothiol glutaredoxin-4|
          Length = 146

 Score = 35.8 bits (81), Expect = 0.093
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = -2

Query: 190 MLVNEALHQGLEMYSSRPIFPKFYIDGEFFGG 95
           +L N+ L +G++ +S  P  P+ YI+GEF GG
Sbjct: 76  VLSNDELREGIKEFSDWPTIPQLYINGEFVGG 107



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>Y1846_SYNY3 (P73056) Hypothetical UPF0055 protein slr1846|
          Length = 107

 Score = 35.8 bits (81), Expect = 0.093
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = -2

Query: 193 EMLVNEALHQGLEMYSSRPIFPKFYIDGEFFGG 95
           ++L +  + QG++ YS+ P  P+ Y++GEF GG
Sbjct: 52  DVLADAEIRQGIKEYSNWPTIPQVYVNGEFVGG 84



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>ATL3K_ARATH (Q9M313) RING-H2 finger protein ATL3K|
          Length = 212

 Score = 34.3 bits (77), Expect = 0.27
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = -1

Query: 371 CLTEYGEQDALCIIFSECCTLHSSLRHYFHVVCTDVLLKQRSQC 240
           CL EY E++ L ++  EC       +HYFHV C D  LK    C
Sbjct: 139 CLCEYMEEEMLRMM-PEC-------KHYFHVYCLDAWLKLNGSC 174



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>GLRX5_MOUSE (Q80Y14) Glutaredoxin-related protein 5|
          Length = 152

 Score = 33.9 bits (76), Expect = 0.35
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = -2

Query: 190 MLVNEALHQGLEMYSSRPIFPKFYIDGEFFGG 95
           +L +  L QG++ YS+ P  P+ Y++GEF GG
Sbjct: 86  VLDDPELRQGIKDYSNWPTIPQVYLNGEFVGG 117



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>GLRX5_HUMAN (Q86SX6) Glutaredoxin-related protein 5|
          Length = 157

 Score = 33.9 bits (76), Expect = 0.35
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = -2

Query: 190 MLVNEALHQGLEMYSSRPIFPKFYIDGEFFGG 95
           +L +  L QG++ YS+ P  P+ Y++GEF GG
Sbjct: 90  VLDDPELRQGIKDYSNWPTIPQVYLNGEFVGG 121



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>GLRXA_LEGPH (Q48833) Probable monothiol glutaredoxin grlA|
          Length = 89

 Score = 32.7 bits (73), Expect = 0.79
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 193 EMLVNEALHQGLEMYSSRPIFPKFYIDGEFFGG 95
           ++L N  + Q L  +S  P FP+ Y+ GE  GG
Sbjct: 34  DILANPDIRQVLPQFSDWPTFPQLYVKGELIGG 66



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>TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT) (E29)
          Length = 414

 Score = 32.7 bits (73), Expect = 0.79
 Identities = 24/73 (32%), Positives = 34/73 (46%)
 Frame = -3

Query: 456 RLIAGVSFCH*APHVTF*VNCIHLSSYRVSHGVRRARRALHYFFGMLYSAFFLTALLPCG 277
           +L+  V+FCH   HVT   + +  ++ RVS       +AL  FF    S F L   +P  
Sbjct: 175 KLLTPVAFCHALGHVT---SNVSFAAVRVS--FTHTVKALEPFFNAAASQFILGQQIPLA 229

Query: 276 LYRRFAEAALTVS 238
           L+   A   L VS
Sbjct: 230 LWLSLAPVVLGVS 242



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>ATL2M_ARATH (O82353) RING-H2 finger protein ATL2M|
          Length = 214

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = -1

Query: 371 CLTEYGEQDALCIIFSECCTLHSSLRHYFHVVCTDVLLKQRSQC 240
           CL EY E + L ++  EC       +HYFH+ C D  LK    C
Sbjct: 141 CLCEYKEAEMLRMM-PEC-------KHYFHLCCLDAWLKLNGSC 176



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>ATL4H_ARATH (P0C041) Putative RING-H2 finger protein ATL4H|
          Length = 336

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = -1

Query: 371 CLTEYGEQDALCIIFSECCTLHSSLRHYFHVVCTDVLLKQRSQC 240
           CL E+ E ++L ++            H FHVVC D  LK  S C
Sbjct: 184 CLGEFNEDESLRLL--------PKCNHTFHVVCIDRWLKSHSNC 219



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>GLRXA_RICCN (Q92GH5) Probable monothiol glutaredoxin grlA|
          Length = 107

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 190 MLVNEALHQGLEMYSSRPIFPKFYIDGEFFGG 95
           +L +  L + L+ +S  P FP+ YI+GE  GG
Sbjct: 54  VLFDAELREDLKKFSDWPTFPQLYINGELVGG 85



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>ATL1A_ARATH (P93823) RING-H2 finger protein ATL1A|
          Length = 381

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -1

Query: 371 CLTEYGEQDALCIIFSECCTLHSSLRHYFHVVCTDVLLKQRSQC 240
           CL E+ E + L II   CC       H FH+ C D+ L+  + C
Sbjct: 137 CLNEFQEDEKLRII-PNCC-------HVFHIDCIDIWLQGNANC 172



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>Y187_BUCAI (P57284) Hypothetical monothiol glutaredoxin BU187|
          Length = 108

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 190 MLVNEALHQGLEMYSSRPIFPKFYIDGEFFGG 95
           +L N  +   L  Y++ P FP+ +IDGE  GG
Sbjct: 51  ILENPDIRSELPKYANWPTFPQLWIDGELIGG 82



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>ZC11A_MOUSE (Q6NZF1) Zinc finger CCCH-type domain-containing protein 11A|
          Length = 792

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = +1

Query: 232 PIRHCERCFSKTSVQTTWK--*CRKEECRVQHSEKIMQSASCSPYSVRHPV 378
           P RHCE      +V T W+   C ++ CR +H E   + +    Y    PV
Sbjct: 23  PFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSEIPCYWENQPV 73



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>YDHD_SHIFL (P0AC72) Probable monothiol glutaredoxin ydhD|
          Length = 115

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 193 EMLVNEALHQGLEMYSSRPIFPKFYIDGEFFGG 95
           ++L N  +   L  Y++ P FP+ ++DGE  GG
Sbjct: 51  DILQNPDIRAELPKYANWPTFPQLWVDGELVGG 83



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>YDHD_ECOLI (P0AC69) Probable monothiol glutaredoxin ydhD|
          Length = 115

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 193 EMLVNEALHQGLEMYSSRPIFPKFYIDGEFFGG 95
           ++L N  +   L  Y++ P FP+ ++DGE  GG
Sbjct: 51  DILQNPDIRAELPKYANWPTFPQLWVDGELVGG 83



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>YDHD_ECOL6 (P0AC70) Probable monothiol glutaredoxin ydhD|
          Length = 115

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 193 EMLVNEALHQGLEMYSSRPIFPKFYIDGEFFGG 95
           ++L N  +   L  Y++ P FP+ ++DGE  GG
Sbjct: 51  DILQNPDIRAELPKYANWPTFPQLWVDGELVGG 83



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>YDHD_ECO57 (P0AC71) Probable monothiol glutaredoxin ydhD|
          Length = 115

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 193 EMLVNEALHQGLEMYSSRPIFPKFYIDGEFFGG 95
           ++L N  +   L  Y++ P FP+ ++DGE  GG
Sbjct: 51  DILQNPDIRAELPKYANWPTFPQLWVDGELVGG 83



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>ZC11A_CHICK (Q5ZJJ1) Zinc finger CCCH-type domain-containing protein 11A|
          Length = 723

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = +1

Query: 232 PIRHCERCFSKTSVQTTWK--*CRKEECRVQHSE 327
           P RHCE      ++ T WK   C +  CR +H E
Sbjct: 23  PFRHCEAALGNETICTLWKEGRCFRNVCRFRHME 56



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>ATL3A_ARATH (Q9SRQ8) RING-H2 finger protein ATL3A|
          Length = 356

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -1

Query: 371 CLTEYGEQDALCIIFSECCTLHSSLRHYFHVVCTDVLLKQRSQC 240
           CL+E+ E ++L ++            H FHV C D  LK  S C
Sbjct: 162 CLSEFQENESLRLL--------PKCNHAFHVPCIDTWLKSHSNC 197



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>HIPK2_MESAU (Q9WUM7) Homeodomain-interacting protein kinase 2 (EC 2.7.11.1)|
           (Mx-interacting protein kinase) (PKM)
          Length = 1168

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
 Frame = +2

Query: 458 GYHSVTCRTIKFIPPSM--SSSVTTIFPWSSPKLILEQYI----STGY 583
           G HS  C   K IPPS   S++V+T  P  +P L  EQ I    STG+
Sbjct: 45  GSHSKLCSQSKNIPPSQPASTTVSTSLPIPNPSLPYEQTIIFPGSTGH 92



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>GLRXA_RICPR (O05957) Probable monothiol glutaredoxin grlA|
          Length = 107

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 190 MLVNEALHQGLEMYSSRPIFPKFYIDGEFFGG 95
           +L + AL + L+ +S  P FP+ YI+G   GG
Sbjct: 54  VLFDTALREDLKKFSDWPTFPQLYINGVLVGG 85



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>ZC11A_HUMAN (O75152) Zinc finger CCCH-type domain-containing protein 11A|
          Length = 810

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +1

Query: 232 PIRHCERCFSKTSVQTTWK--*CRKEECRVQHSE 327
           P RHCE      +V T W+   C ++ CR +H E
Sbjct: 23  PFRHCEAAIGNETVCTLWQEGRCFRQVCRFRHME 56



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>ZC11A_PONPY (Q5REG6) Zinc finger CCCH-type domain-containing protein 11A|
          Length = 811

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +1

Query: 232 PIRHCERCFSKTSVQTTWK--*CRKEECRVQHSE 327
           P RHCE      +V T W+   C ++ CR +H E
Sbjct: 24  PFRHCEAALGNETVCTLWQEGRCFRQVCRFRHME 57



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>ATL4L_ARATH (Q9ZT49) RING-H2 finger protein ATL4L (RING-H2 zinc finger protein|
           RHA3b)
          Length = 200

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -1

Query: 371 CLTEYGEQDALCIIFSECCTLHSSLRHYFHVVCTDVLLKQRSQC 240
           C+TE+ E + + I+    C+      H FHV C D  L  RS C
Sbjct: 116 CITEFSEGEEIRIL--PLCS------HAFHVACIDKWLTSRSSC 151



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>AT11A_HUMAN (P98196) Probable phospholipid-transporting ATPase IH (EC 3.6.3.1)|
           (ATPase class I type 11A) (ATPase IS)
          Length = 1134

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 20/59 (33%), Positives = 24/59 (40%)
 Frame = -2

Query: 484 CSTSH*MVPKTNCRGQLLSLSTTCYILSELHSSIKLQGVSRSTESKTRSALFFRNVVLC 308
           C   H  VP   C GQ+L  S          S I +   S S   + R  LFFR + LC
Sbjct: 430 CIEGHVYVPHVICNGQVLPES----------SGIDMIDSSPSVNGREREELFFRALCLC 478



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>TPT_FLATR (P49132) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 407

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 22/73 (30%), Positives = 31/73 (42%)
 Frame = -3

Query: 456 RLIAGVSFCH*APHVTF*VNCIHLSSYRVSHGVRRARRALHYFFGMLYSAFFLTALLPCG 277
           +L+  V FCH   HVT      ++S   V+       +AL  FF    S F L   +P  
Sbjct: 168 KLLIPVGFCHALGHVT-----SNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPIS 222

Query: 276 LYRRFAEAALTVS 238
           L+   A   + VS
Sbjct: 223 LWLSLAPVVIGVS 235



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>ATL2G_ARATH (O64763) RING-H2 finger protein ATL2G precursor (RING-H2 finger|
           protein ATL9)
          Length = 378

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = -1

Query: 371 CLTEYGEQDALCIIFSECCTLHSSLRHYFHVVCTDVLLKQRSQC 240
           CL E+ E D    +   CC       H FH  C DV L + S C
Sbjct: 138 CLCEF-EDDETLRLMPPCC-------HVFHADCVDVWLSEHSTC 173



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>ATL5G_ARATH (Q9LF64) Probable RING-H2 finger protein ATL5G|
          Length = 362

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -1

Query: 371 CLTEYGEQDALCIIFSECCTLHSSLRHYFHVVCTDVLLKQRSQC 240
           CL+E+ E ++L ++            H FH+ C D  LK  S C
Sbjct: 145 CLSEFEENESLRLL--------PKCNHAFHLPCIDTWLKSHSNC 180



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>ATL5K_ARATH (Q9LSW9) RING-H2 finger protein ATL5K (RING-H2 finger protein|
           ATL16)
          Length = 375

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -1

Query: 371 CLTEYGEQDALCIIFSECCTLHSSLRHYFHVVCTDVLLKQRSQC 240
           CL+E+ +++ L II         +  H FH+ C DV L+  + C
Sbjct: 141 CLSEFQDEEKLRII--------PNCSHLFHIDCIDVWLQNNANC 176



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>ACH3_CAEEL (P54244) Acetylcholine receptor, alpha-type subunit deg-3 precursor|
          Length = 564

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +2

Query: 437 LTPAISLGYHSVTCR-TIKFIPPSMSSSVTTIFPWSSPKLILEQYIST 577
           L PAI    +++TCR  I+F P    +   TI  W++ K  L+ Y  T
Sbjct: 176 LYPAI----YTITCRLNIRFFPYDRQNCTLTISSWTNSKSALDYYADT 219



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>ATL1F_ARATH (Q9LQM2) Putative RING-H2 finger protein ATL1F precursor|
          Length = 332

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -1

Query: 383 QVTGCLTEYGEQDALCIIFSECCTLHSSLRHYFHVVCTDVLLKQRSQC 240
           Q + CLTE+ + D + +I        S+  H FH +C D+  +    C
Sbjct: 153 QCSICLTEFMDDDTIRLI--------STCNHSFHTICIDLWFEGHKTC 192



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>ATL2J_ARATH (O80927) RING-H2 finger protein ATL2J|
          Length = 235

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = -1

Query: 362 EYGEQDALCI-IFSECCTLH--SSLRHYFHVVCTDVLLKQRSQCLI 234
           E G + ++C+ +F++   L   S  +H FHV+C +  LK    C I
Sbjct: 137 EIGNECSVCLMVFTDSDELRQLSECKHAFHVLCIETWLKDHPNCPI 182



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>YZ73_CAEEL (Q19297) Hypothetical protein F10D7.3 in chromosome X|
          Length = 146

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2

Query: 199 LDEMLVNEALHQGLEMYSSRPIFPKFYIDGEFFGG 95
           LD     E + + L+ YS R   P+ +I G+F GG
Sbjct: 77  LDRSNQTEEMQEILKKYSGRTTVPQLFISGKFVGG 111


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,800,049
Number of Sequences: 219361
Number of extensions: 1687201
Number of successful extensions: 4698
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 4565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4698
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5044307840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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