Clone Name	rbasd25m24
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	emb|Z77764.1|HVZ77764 H.vulgare chloroplast rpoA gene	1084	0.0
2	gb|AY115924.1| Hordeum pusillum RNA polymerase alpha subunit (rp...	1080	0.0
3	gb|AY115923.1| Hordeum murinum clone Hormur2-CIho15683 RNA polym...	1080	0.0
4	gb|AY115922.1| Hordeum murinum clone Hormur1-PI247054 RNA polyme...	1080	0.0
5	gb|AY115919.1| Hordeum bulbosum RNA polymerase alpha subunit (rp...	1080	0.0
6	gb|AY115918.1| Hordeum brevisubulatum RNA polymerase alpha subun...	1080	0.0
7	emb|Z79500.1|HEZ79500 H.erectifolium chloroplast rpoA gene	1080	0.0
8	emb|Z77762.1|HMZ77762 Hordeum murinum subsp. glaucum chloroplast...	1080	0.0
9	gb|AY115921.1| Hordeum marinum RNA polymerase alpha subunit (rpo...	1072	0.0
10	gb|AY115920.1| Hordeum jubatum RNA polymerase alpha subunit (rpo...	1072	0.0
11	gb|AY115917.1| Hordeum brachyantherum RNA polymerase alpha subun...	1072	0.0
12	emb|Z77763.1|HMZ77763 Hordeum marinum subsp. gussoneanum chlorop...	1072	0.0
13	emb|Z77761.1|HBZ77761 H.brachyantherum chloroplast rpoA gene	1072	0.0
14	gb|AY115968.1| Psathyrostachys juncea RNA polymerase alpha subun...	1057	0.0
15	gb|AY115967.1| Psathyrostachys fragilis RNA polymerase alpha sub...	1057	0.0
16	emb|Z77753.1|PFZ77753 Psathyrostachys fragilis subsp. villosus c...	1057	0.0
17	emb|Z77752.1|PFZ77752 Psathyrostachys fragilis subsp. fragilis c...	1057	0.0
18	gb|AY607070.1| Psathyrostachys rupestris subsp. rupestris vouche...	1057	0.0
19	gb|AY607068.1| Psathyrostachys huashanica voucher H3087 RNA poly...	1057	0.0
20	gb|AY607067.1| Psathyrostachys fragilis subsp. villosus voucher ...	1057	0.0
21	gb|AY607066.1| Psathyrostachys fragilis subsp. villosus voucher ...	1057	0.0
22	gb|AY607062.1| Psathyrostachys lanuginosa isolate A voucher H880...	1057	0.0
23	gb|AY607061.1| Psathyrostachys juncea voucher H7544 RNA polymera...	1057	0.0
24	gb|AY607065.1| Psathyrostachys fragilis subsp. secaliformis vouc...	1051	0.0
25	gb|AY362785.1| Elymus repens clone Elyrep6 RNA polymerase alpha ...	1049	0.0
26	gb|AY362784.1| Elymus repens clone Elyrep5 RNA polymerase alpha ...	1049	0.0
27	gb|AY362783.1| Elymus repens clone Elyrep4 RNA polymerase alpha ...	1049	0.0
28	gb|AY362782.1| Elymus repens clone Elyrep3 RNA polymerase alpha ...	1049	0.0
29	gb|AY362781.1| Elymus repens clone Elyrep2 RNA polymerase alpha ...	1049	0.0
30	gb|AY362780.1| Elymus repens clone Elyrep1 RNA polymerase alpha ...	1049	0.0
31	gb|AY115959.1| Pseudoroegneria spicata clone Psespi8-D2839 RNA p...	1049	0.0
32	gb|AY115958.1| Pseudoroegneria spicata clone Psespi4-D2844 RNA p...	1049	0.0
33	gb|AY115957.1| Pseudoroegneria spicata clone Psespi3-PI610986 RN...	1049	0.0
34	gb|AY115956.1| Pseudoroegneria spicata clone Psespi2-PI236681 RN...	1049	0.0
35	gb|AY115955.1| Pseudoroegneria libanotica RNA polymerase alpha s...	1049	0.0
36	gb|AY115952.1| Peridictyon sanctum RNA polymerase alpha subunit ...	1049	0.0
37	gb|AY115950.1| Henrardia persica RNA polymerase alpha subunit (r...	1049	0.0
38	gb|AY115949.1| Eremopyrum orientale clone Ereori-H5555 RNA polym...	1049	0.0
39	gb|AY115947.1| Eremopyrum bonaepartis clone Erebon2-H5569 RNA po...	1049	0.0
40	gb|AY115946.1| Eremopyrum bonaepartis clone Erebon1-H5554 RNA po...	1049	0.0
41	gb|AY115945.1| Elymus wawawaiensis clone Elywaw3-PI598812 RNA po...	1049	0.0
42	gb|AY115944.1| Elymus wawawaiensis clone Elywaw1-PI285272 RNA po...	1049	0.0
43	gb|AY115940.1| Elymus trachycaulus clone Elytra3-PI452446 RNA po...	1049	0.0
44	gb|AY115939.1| Elymus trachycaulus clone Elytra1-PI372500 RNA po...	1049	0.0
45	gb|AY115938.1| Elymus lanceolatus clone Elylan3-PI531623 RNA pol...	1049	0.0
46	gb|AY115937.1| Elymus lanceolatus clone Elylan1-R-13-6-10 RNA po...	1049	0.0
47	gb|AY115935.1| Elymus glaucus clone Elygla7-PI593652 RNA polymer...	1049	0.0
48	gb|AY115934.1| Elymus glaucus clone Elygla6-W610215 RNA polymera...	1049	0.0
49	gb|AY115933.1| Elymus glaucus clone Elygla4-RJMG130 RNA polymera...	1049	0.0
50	gb|AY115932.1| Elymus elymoides RNA polymerase alpha subunit (rp...	1049	0.0
51	gb|AY115931.1| Elymus ciliaris RNA polymerase alpha subunit (rpo...	1049	0.0
52	gb|AY115930.1| Elymus canadensis clone Elycan4-PI531568 RNA poly...	1049	0.0
53	gb|AY115928.1| Elymus canadensis clone Elycan1-MEBarkworth97-86 ...	1049	0.0
54	gb|AY115927.1| Elymus californicus RNA polymerase alpha subunit ...	1049	0.0
55	gb|AY115914.1| Agropyron mongolicum RNA polymerase alpha subunit...	1049	0.0
56	gb|AY115912.1| Agropyron cristatum clone Agrcri1-C-3-6-10 RNA po...	1049	0.0
57	gb|DQ159334.1| Elymus dentatus RNA polymerase subunit a (rpoA) g...	1049	0.0
58	gb|DQ159333.1| Elymus caucasicus RNA polymerase subunit a (rpoA)...	1049	0.0
59	gb|DQ159332.1| Elymus abolinii RNA polymerase subunit a (rpoA) g...	1049	0.0
60	emb|Z79501.1|FSZ79501 Festucopsis serpentini chloroplast rpoA gene	1049	0.0
61	emb|Z77771.1|ACZ77771 A.cristatum chloroplast rpoA gene	1049	0.0
62	emb|Z77755.1|PRZ77755 P.rupestris chloroplast rpoA gene	1049	0.0
63	emb|Z77749.1|PSZ77749 P.sanctum chloroplast rpoA gene	1049	0.0
64	emb|Z77748.1|HPZ77748 H.persica chloroplast rpoA gene	1049	0.0
65	emb|Z77746.1|ETZ77746 E.triticeum chloroplast rpoA gene	1049	0.0
66	emb|Z77744.1|PSZ77744 P.spicata chloroplast rpoA gene	1049	0.0
67	emb|Z77743.1|LEZ77743 Elytrigia elongata chloroplast rpoA gene	1049	0.0
68	gb|AY607071.1| Psathyrostachys caduca voucher H6702 RNA polymera...	1049	0.0
69	gb|AY607063.1| Psathyrostachys lanuginosa isolate B voucher H880...	1049	0.0
70	gb|AY115966.1| Thinopyrum scirpeum RNA polymerase alpha subunit ...	1041	0.0
71	gb|AY115964.1| Thinopyrum bessarabicum RNA polymerase alpha subu...	1041	0.0
72	gb|AY115963.1| Taeniatherum caput-medusae RNA polymerase alpha s...	1041	0.0
73	gb|AY115954.1| Pseudoroegneria strigosa clone Psestr2-PI531755 R...	1041	0.0
74	gb|AY115953.1| Pseudoroegneria strigosa clone Psestr1-MA-109-31-...	1041	0.0
75	gb|AY115948.1| Eremopyrum orientale clone Eredis-H5555 RNA polym...	1041	0.0
76	gb|AY115943.1| Elymus virginicus clone Elyvir6-RJMG163 RNA polym...	1041	0.0
77	gb|AY115942.1| Elymus virginicus clone Elyvir2-PI490361 RNA poly...	1041	0.0
78	gb|AY115941.1| Elymus virginicus clone Elyvir1-PI436945 RNA poly...	1041	0.0
79	gb|AY115936.1| Elymus hystrix RNA polymerase alpha subunit (rpoA...	1041	0.0
80	gb|AY115929.1| Elymus canadensis clone Elycan2-PI578675 RNA poly...	1041	0.0
81	gb|AY115926.1| Haynaldia villosa clone Dasvil2-PI470279 RNA poly...	1041	0.0
82	gb|AY115925.1| Haynaldia villosa clone Dasvil1-PI251478 RNA poly...	1041	0.0
83	gb|AY115913.1| Agropyron cristatum clone Agrcri2-PI281862 RNA po...	1041	0.0
84	gb|AY115911.1| Aegilops uniaristata RNA polymerase alpha subunit...	1041	0.0
85	gb|AY115908.1| Aegilops markgrafii RNA polymerase alpha subunit ...	1041	0.0
86	emb|Z77770.1|FFZ77770 F.festucoides chloroplast rpoA gene	1041	0.0
87	emb|Z77769.1|TBZ77769 T.bessarabicum chloroplast rpoA gene	1041	0.0
88	emb|Z77760.1|TCZ77760 T.caput-medusae chloroplast rpoA gene	1041	0.0
89	emb|Z77758.1|PTZ77758 P.tauschii chloroplast rpoA gene	1041	0.0
90	emb|Z77757.1|CMZ77757 C.monococcum chloroplast rpoA gene	1041	0.0
91	emb|Z77756.1|AMZ77756 A.muticum chloroplast rpoA gene	1041	0.0
92	emb|Z77745.1|EDZ77745 E.distans chloroplast rpoA gene	1041	0.0
93	emb|Z77742.1|CCZ77742 C.comosum chloroplast rpoA gene	1041	0.0
94	emb|Z77741.1|DVZ77741 D.villosum chloroplast rpoA gene	1041	0.0
95	emb|Z77754.1|PSZ77754 P.stoloniformis chloroplast rpoA gene	1039	0.0
96	gb|AY607064.1| Psathyrostachys lanuginosa isolate C voucher H880...	1037	0.0
97	gb|AY115965.1| Lophopyrum elongatum RNA polymerase alpha subunit...	1033	0.0
98	gb|AY115962.1| Secale montanum clone Secmon2-PI206991 RNA polyme...	1033	0.0
99	gb|AY115961.1| Secale cereale RNA polymerase alpha subunit (rpoA...	1033	0.0
100	gb|AY115960.1| Secale montanum clone Secmon1-PI440654 RNA polyme...	1033	0.0
101	gb|AY115915.1| Australopyrum retrofractum RNA polymerase alpha s...	1033	0.0
102	gb|AY115910.1| Aegilops tauschii RNA polymerase alpha subunit (r...	1033	0.0
103	gb|AY115909.1| Aegilops speltoides RNA polymerase alpha subunit ...	1033	0.0
104	gb|DQ159335.1| Elymus mutabilis RNA polymerase subunit a (rpoA) ...	1033	0.0
105	emb|Z77767.1|ARZ77767 A.retrofractum chloroplast rpoA gene	1033	0.0
106	emb|Z77766.1|SSZ77766 S.speltoides chloroplast rpoA gene	1033	0.0
107	emb|Z77759.1|BIZ77759 B.inermis chloroplast rpoA gene	1033	0.0
108	dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome	1033	0.0
109	emb|Z77768.1|AVZ77768 A.velutinum chloroplast rpoA gene	1029	0.0
110	emb|Z77765.1|SSZ77765 S.strictum chloroplast rpoA gene	1027	0.0
111	gb|AY115916.1| Australopyrum velutinum RNA polymerase alpha subu...	1025	0.0
112	gb|AY115951.1| Heteranthelium piliferum RNA polymerase alpha sub...	1017	0.0
113	emb|Z77750.1|HPZ77750 H.piliferum chloroplast rpoA gene	1013	0.0
114	emb|X15595.1|CHTARPOA Wheat chloroplast rpoA gene for RNA polyme...	971	0.0
115	gb|AY607069.1| Psathyrostachys caduca voucher H6700 RNA polymera...	831	0.0
116	gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast,...	829	0.0
117	dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete ...	829	0.0
118	emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome	821	0.0
119	gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome	821	0.0
120	gb|BT018701.1| Zea mays clone EL01N0515A02.d mRNA sequence	799	0.0
121	emb|X07810.1|CHZMRPOA Zea mays chloroplast rpoA gene for RNA pol...	680	0.0
122	emb|Z77751.1|CDZ77751 C.delileana chloroplast rpoA gene	644	0.0
123	gb|DQ069431.1| Typha latifolia RNA polymerase alpha chain (rpoA)...	545	e-152
124	gb|DQ069432.1| Yucca schidigera RNA polymerase alpha chain (rpoA...	504	e-139
125	gb|DQ289179.1| Oryza australiensis RNA polymerase subunit (rpoA)...	498	e-137
126	gb|DQ289178.1| Oryza punctata RNA polymerase subunit (rpoA) gene...	498	e-137
127	gb|DQ289180.1| Oryza granulata RNA polymerase subunit (rpoA) gen...	490	e-135
128	gb|DQ289176.1| Oryza officinalis RNA polymerase subunit (rpoA) g...	490	e-135
129	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	490	e-135
130	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	490	e-135
131	emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb...	490	e-135
132	dbj|AK066307.1| Oryza sativa (japonica cultivar-group) cDNA clon...	484	e-133
133	ref|XM_481020.1| Oryza sativa (japonica cultivar-group), mRNA	482	e-133
134	ref|XM_475049.1| Oryza sativa (japonica cultivar-group), predic...	482	e-133
135	ref|NM_190858.1| Oryza sativa (japonica cultivar-group), predic...	482	e-133
136	gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar N...	482	e-133
137	gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA...	482	e-133
138	gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-1...	482	e-133
139	emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chlor...	482	e-133
140	emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4,...	482	e-133
141	gb|DQ289177.1| Oryza rhizomatis RNA polymerase subunit (rpoA) ge...	482	e-133
142	gb|DQ289175.1| Oryza sp. IRGC 81916 RNA polymerase subunit (rpoA...	482	e-133
143	gb|DQ289173.1| Oryza nivara RNA polymerase subunit (rpoA) gene, ...	482	e-133
144	gb|DQ289172.1| Oryza sativa RNA polymerase subunit (rpoA) gene, ...	482	e-133
145	gb|DQ289171.1| Oryza sativa RNA polymerase subunit (rpoA) gene, ...	482	e-133
146	gb|DQ289170.1| Oryza sativa RNA polymerase subunit (rpoA) gene, ...	482	e-133
147	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	482	e-133
148	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	482	e-133
149	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	482	e-133
150	dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic D...	482	e-133
151	dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic D...	482	e-133
152	dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome	482	e-133
153	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	480	e-132
154	dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic D...	480	e-132
155	dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic D...	480	e-132
156	gb|DQ289174.1| Oryza glumipatula RNA polymerase subunit (rpoA) g...	474	e-130
157	ref|NM_195997.1| Oryza sativa (japonica cultivar-group) putative...	466	e-128
158	gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome...	466	e-128
159	gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, c...	466	e-128
160	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	466	e-128
161	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	466	e-128
162	gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome...	398	e-108
163	gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome...	398	e-108
164	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	398	e-108
165	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	337	2e-89
166	dbj|AP005590.3| Oryza sativa (japonica cultivar-group) genomic D...	337	2e-89
167	gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome...	309	6e-81
168	gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome...	309	6e-81
169	gb|DQ069429.1| Nuphar advena RNA polymerase alpha chain (rpoA) g...	272	1e-69
170	emb|AJ627251.1| Nymphaea alba chloroplast, complete genome	272	1e-69
171	dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic D...	264	3e-67
172	gb|AY757818.1| Acorus gramineus RpoA (rpoA) gene, complete cds; ...	260	5e-66
173	gb|DQ069427.1| Acorus americanus RNA polymerase alpha chain (rpo...	260	5e-66
174	emb|AJ879453.1| Acorus calamus chloroplast, complete genome	260	5e-66
175	emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complet...	250	5e-63
176	gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloropl...	244	3e-61
177	gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, ...	244	3e-61
178	gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, ...	238	2e-59
179	gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, comple...	236	7e-59
180	emb|AJ506040.1|SCO506040 Zea mays transgenic line CBH-351, inser...	230	4e-57
181	emb|AJ243345.1|SAL243345 Sinapis alba chloroplast putative RNA p...	222	1e-54
182	gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, compl...	220	4e-54
183	gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence	218	2e-53
184	emb|X15645.1|CHPSRPOA Pea chloroplast rpl36 (partial), rps11, rp...	210	4e-51
185	emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloropl...	206	6e-50
186	gb|DQ069430.1| Ranunculus macranthus RNA polymerase alpha chain ...	204	2e-49
187	emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA	204	2e-49
188	emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast ...	204	2e-49
189	gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, c...	204	2e-49
190	gb|AY005806.1| Transformation vector pJYS54, plastid targeting r...	204	2e-49
191	gb|AY582139.1| Panax ginseng chloroplast, complete genome	204	2e-49
192	dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete s...	204	2e-49
193	dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, compl...	204	2e-49
194	gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome	204	2e-49
195	emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomi...	202	9e-49
196	emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast ...	196	6e-47
197	emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome	196	6e-47
198	gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloropla...	196	6e-47
199	gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, ...	196	6e-47
200	emb|AJ970307.1| Cucumis sativus chloroplast complete genome	194	2e-46
201	gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid...	194	2e-46
202	dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome	194	2e-46
203	emb|X03496.1|CHSOINFA Spinach plastid genes infA, rps 11 and rpo...	188	1e-44
204	gb|AF030983.1|AF030983 Lathraea clandestina ribosomal protein S1...	186	6e-44
205	gb|AC093544.8| Medicago truncatula chloroplast, complete genome,...	186	6e-44
206	dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, co...	186	6e-44
207	gb|AF536226.1| Vigna angularis chloroplast S10A operon, partial ...	174	2e-40
208	gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, comp...	151	3e-33
209	dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome	151	3e-33
210	gb|AY818944.1| Plantago rugelii RNA polymerase alpha subunit (rp...	149	1e-32
211	gb|AY936353.1| Cuscuta japonica Rps11 (rps11) gene, partial cds;...	145	2e-31
212	gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast...	135	2e-28
213	emb|AM040152.1| Chrysanthemum x morifolium chloroplast rpoA gene...	135	2e-28
214	emb|AJ439611.1|CRE439611 Cuscuta reflexa plastid petD gene (part...	121	3e-24
215	emb|X07106.1|CHSOPSBO Spinach plastid psbB operon with genes for...	119	1e-23
216	gb|AY886744.1| Oedipodium griffithianum ribosomal protein S11 (r...	113	7e-22
217	emb|X54751.1|CHTAPSGB Triticum aestivum chloroplast psbH, petB, ...	111	3e-21
218	gb|AY886747.1| Polytrichum pallidisetum ribosomal protein S11 (r...	109	1e-20
219	gb|AY936359.1| Cuscuta europaea Rps11 (rps11) gene, partial cds;...	105	2e-19
220	gb|AY886746.1| Dendroligotrichum dendroides ribosomal protein S1...	105	2e-19
221	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	103	7e-19
222	dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic D...	103	7e-19
223	dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic D...	103	7e-19
224	emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) ...	103	7e-19
225	gb|AY911400.1| Polytrichadelphus purpureus RNA polymerase alpha ...	100	1e-17
226	dbj|AP006175.2| Oryza sativa (japonica cultivar-group) genomic D...	98	4e-17
227	dbj|AP006855.1| Oryza sativa (japonica cultivar-group) genomic D...	98	4e-17
228	dbj|AP006755.1| Oryza sativa (japonica cultivar-group) genomic D...	98	4e-17
229	emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA	94	6e-16
230	gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome	90	1e-14
231	ref|XM_476012.1| Oryza sativa (japonica cultivar-group), predic...	88	4e-14
232	dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complet...	86	2e-13
233	gb|AY886743.1| Buxbaumia aphylla ribosomal protein S11 (rps11) g...	84	6e-13
234	gb|AY884000.1| Takakia lepidozioides ribosomal protein S11 (rps1...	82	2e-12
235	gb|DQ069428.1| Ginkgo biloba RNA polymerase alpha chain (rpoA) g...	80	9e-12
236	dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic D...	76	1e-10
237	dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic D...	76	1e-10
238	emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa...	76	1e-10
239	dbj|AB193121.1| Takakia lepidozioides rps11, rpoA, petD genes fo...	74	6e-10
240	gb|AC139344.17| Medicago truncatula clone mth2-34b22, complete s...	70	9e-09
241	emb|AJ001024.1|CLPAPETBD Picea abies chloroplast DNA petB and pe...	70	9e-09
242	gb|AY885232.1| Sphagnum fimbriatum ribosomal protein S11 (rps11)...	66	1e-07
243	dbj|AB098237.1| Nicotiana tomentosiformis rpoA gene for RNA poly...	64	6e-07
244	dbj|AB098216.1| Nicotiana sylvestris rpoA gene for RNA polymeras...	64	6e-07
245	gb|AY886745.1| Andreaea rupestris ribosomal protein S11 (rps11) ...	64	6e-07
246	dbj|AB087466.1| Anthoceros formosae chloroplast rpoA mRNA for RN...	64	6e-07
247	emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, ...	62	2e-06
248	emb|AL031135.1|ATF8D20 Arabidopsis thaliana DNA chromosome 4, BA...	62	2e-06
249	dbj|AB193122.1| Sphagnum girgensohnii rps11, rpoA, petD genes fo...	58	3e-05
250	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	56	1e-04
251	dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic D...	56	1e-04
252	dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic D...	56	1e-04
253	gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete g...	52	0.002
254	dbj|AB177751.1| Asparagus scandens chloroplast DNA, petD-rpoA in...	52	0.002
255	dbj|AB177747.1| Asparagus oligoclonos chloroplast DNA, petD-rpoA...	52	0.002
256	dbj|AB177746.1| Asparagus officinalis chloroplast DNA, petD-rpoA...	52	0.002
257	dbj|AB177742.1| Asparagus kiusianus chloroplast DNA, petD-rpoA i...	52	0.002
258	dbj|AB177741.1| Asparagus kasakstanicus chloroplast DNA, petD-rp...	52	0.002
259	emb|BX682556.5| Zebrafish DNA sequence from clone DKEY-105I19 in...	46	0.13
260	dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome	46	0.13
261	gb|AY305266.1| Cucurbita pepo clone S-N08 atp9 gene, complete se...	44	0.52
262	gb|AC141418.11| Pan troglodytes clone rp43-121l12, complete sequ...	44	0.52
263	gb|AY660566.1| Huperzia lucidula chloroplast, complete genome	44	0.52
264	dbj|AP005883.3| Oryza sativa (japonica cultivar-group) genomic D...	44	0.52
265	dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic D...	44	0.52
266	gb|AC152123.1| Genomic sequence for broccoli [Brassica oleracea ...	44	0.52
267	gb|AE017321.1| Wolbachia endosymbiont strain TRS of Brugia malay...	44	0.52
268	dbj|AP000355.1| Homo sapiens genomic DNA, chromosome 22q11.2, cl...	44	0.52
269	gb|AC098708.3| Mus musculus BAC clone RP23-1I16 from 13, complet...	42	2.1
270	gb|AC093891.3| Homo sapiens BAC clone RP11-691E1 from 4, complet...	42	2.1
271	gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold	42	2.1
272	gb|AC155308.2| Mus musculus BAC clone RP24-150P15 from chromosom...	42	2.1
273	gb|AC009969.10| Homo sapiens BAC clone RP11-418G17 from 2, compl...	42	2.1
274	gb|AC026950.15| Homo sapiens chromosome 8, clone RP11-555E9, com...	42	2.1
275	gb|AC068483.6| Homo sapiens BAC clone RP11-31G7 from 2, complete...	42	2.1
276	gb|AC026888.6|AC026888 Homo sapiens chromosome 14 clone CTD-2243...	42	2.1
277	dbj|AP002033.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...	42	2.1
278	dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete ge...	42	2.1
279	gb|AC153799.1| Mus musculus BAC RP23-145M15 (Roswell Park Cance...	40	8.1
280	gb|AC108768.14| Mus musculus chromosome 8, clone RP23-398L15, co...	40	8.1
281	ref|XM_513449.1| PREDICTED: Pan troglodytes similar to Pals1-ass...	40	8.1
282	ref|NM_177100.2| Mus musculus RIKEN cDNA C130071C03 gene (C13007...	40	8.1
283	ref|NM_019079.2| Homo sapiens hypothetical protein FLJ10884 (ECA...	40	8.1
284	gb|AE017308.1| Mycoplasma mobile 163K complete genome	40	8.1
285	gb|AC010124.6| Drosophila melanogaster clone BACR06O03, complete...	40	8.1
286	ref|XM_424926.1| PREDICTED: Gallus gallus similar to Dedicator o...	40	8.1
287	gb|AC093956.2| Oryza sativa (japonica cultivar-group) chromosome...	40	8.1
288	gb|BC042617.1| Homo sapiens hypothetical protein MGC34646, mRNA ...	40	8.1
289	gb|AC149540.1| Populus trichocarpa clone Pop1-111J19, complete s...	40	8.1
290	ref|NM_001040157.1| Homo sapiens KIAA1712 (KIAA1712), mRNA	40	8.1
291	gb|AC130672.10| Mus musculus chromosome 1, clone RP24-95L18, com...	40	8.1
292	gb|CP000121.1| Anabaena variabilis ATCC 29413 plasmid C, complet...	40	8.1
293	gb|DP000012.1| Macropus eugenii target 1 genomic scaffold	40	8.1
294	gb|AC123866.4| Mus musculus BAC clone RP23-124I3 from chromosome...	40	8.1
295	emb|CR847804.27| Zebrafish DNA sequence from clone DKEY-85C24 in...	40	8.1
296	ref|XM_822601.1| Trypanosoma brucei TREU927 bloodstream stage al...	40	8.1
297	emb|CR769785.19| Zebrafish DNA sequence from clone DKEY-1N3 in l...	40	8.1
298	gb|BC060808.1| Homo sapiens hypothetical protein FLJ10884, mRNA ...	40	8.1
299	gb|AC125348.3| Mus musculus BAC clone RP23-377H20 from chromosom...	40	8.1
300	emb|CR382290.16| Zebrafish DNA sequence from clone CH211-236D22 ...	40	8.1
301	gb|AC005084.2| Homo sapiens BAC clone CTA-298G8 from 7, complete...	40	8.1
302	ref|XM_728551.1| Plasmodium chabaudi chabaudi hypothetical prote...	40	8.1
303	ref|XM_731199.1| Plasmodium chabaudi chabaudi hypothetical prote...	40	8.1
304	ref|XM_738391.1| Plasmodium chabaudi chabaudi hypothetical prote...	40	8.1
305	ref|XM_739307.1| Plasmodium chabaudi chabaudi hypothetical prote...	40	8.1
306	gb|AC109280.9| Mus musculus chromosome 18, clone RP23-400B7, com...	40	8.1
307	gb|BC047100.1| Homo sapiens cDNA clone IMAGE:5287322	40	8.1
308	gb|BC036480.2| Homo sapiens cDNA clone IMAGE:5260726	40	8.1
309	emb|CR626910.5| Zebrafish DNA sequence from clone DKEY-204E20 in...	40	8.1
310	emb|AL162739.24| Human DNA sequence from clone RP5-1155K23 on ch...	40	8.1
311	emb|AL035444.9|HS43H13 Human DNA sequence from clone RP1-43H13 o...	40	8.1
312	emb|AL034348.5|HS84D21 Human DNA sequence from clone RP1-84D21 o...	40	8.1
313	emb|AL023655.1|HS242N11 Human DNA sequence from clone RP1-242N11...	40	8.1
314	gb|BC048992.1| Homo sapiens hypothetical protein MGC34646, mRNA ...	40	8.1
315	emb|BX901937.7| Zebrafish DNA sequence from clone DKEY-9I23 in l...	40	8.1
316	emb|AL929547.13| Mouse DNA sequence from clone RP23-180L23 on ch...	40	8.1
317	emb|AL928933.7| Mouse DNA sequence from clone RP23-419H6 on chro...	40	8.1
318	gb|BC045590.1| Homo sapiens cDNA clone IMAGE:5276927	40	8.1
319	gb|BC048008.1| Homo sapiens cDNA clone IMAGE:5295779	40	8.1
320	emb|AL834314.1|HSM805356 Homo sapiens mRNA; cDNA DKFZp434B1629 (...	40	8.1
321	dbj|AK055372.1| Homo sapiens cDNA FLJ30810 fis, clone FEBRA2001440	40	8.1
322	dbj|AK001973.1| Homo sapiens cDNA FLJ11111 fis, clone PLACE1005923	40	8.1
323	dbj|AK001746.1| Homo sapiens cDNA FLJ10884 fis, clone NT2RP4001950	40	8.1
324	gb|AF372979.1| Mus musculus P locus fat-associated ATPase (Atp10...	40	8.1
325	gb|AC097653.2| Homo sapiens BAC clone RP11-148L24 from 4, comple...	40	8.1
326	gb|AC182460.2| Gallus gallus BAC clone CH261-132N3 from chromoso...	40	8.1
327	gb|AC177806.2| Gallus gallus BAC clone CH261-13L12 from chromoso...	40	8.1
328	emb|BX511224.8| Zebrafish DNA sequence from clone CH211-113D14 i...	40	8.1
329	gb|AC160760.4| Mus musculus BAC clone RP23-449G13 from chromosom...	40	8.1
330	gb|AC026701.6| Homo sapiens chromosome 5 clone CTC-547D20, compl...	40	8.1
331	dbj|AK029460.1| Mus musculus 0 day neonate head cDNA, RIKEN full...	40	8.1
332	dbj|AK048540.1| Mus musculus 16 days embryo head cDNA, RIKEN ful...	40	8.1
333	gb|CP000040.1| Bacillus cereus E33L plasmid pE33L466, complete s...	40	8.1
334	gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome	40	8.1
335	ref|XM_395665.2| PREDICTED: Apis mellifera similar to ENSANGP000...	40	8.1
336	ref|XM_392116.2| PREDICTED: Apis mellifera hypothetical LOC40857...	40	8.1
337	gb|AC009183.5|AC009183 Drosophila melanogaster, chromosome 3R, r...	40	8.1
338	gb|AC007367.3| Homo sapiens BAC clone RP11-518G12 from 2, comple...	40	8.1
339	gb|AC151289.3| Mus musculus BAC clone RP23-364K1 from chromosome...	40	8.1
340	dbj|AB211065.1| Homo sapiens ECAT11 mRNA for ES cell associated ...	40	8.1
341	gb|AC124283.11| Homo sapiens chromosome 17, clone RP13-638C3, co...	40	8.1
342	gb|AC105328.13| Homo sapiens chromosome 8, clone RP11-932B15, co...	40	8.1
343	ref|XM_579970.1| PREDICTED: Rattus norvegicus LOC499496 (LOC4994...	40	8.1
344	ref|NM_173519.1| Homo sapiens hypothetical protein MGC34646 (MGC...	40	8.1
345	gb|AC024174.2|T21E18 Sequence of BAC T21E18 from Arabidopsis tha...	40	8.1
346	gb|AC150470.3| Macropus eugenii clone ME_KBa-588N19, complete se...	40	8.1
347	gb|AC132578.3| Mus musculus BAC clone RP24-458M10 from 8, comple...	40	8.1
348	gb|AE003685.5| Drosophila melanogaster chromosome 3R, section 23...	40	8.1
349	gb|AC004228.2|AC004228 Homo sapiens Chromosome 11q12.2 PAC clone...	40	8.1
350	gb|AC109163.16| Mus musculus chromosome 8, clone RP24-174F12, co...	40	8.1
351	dbj|AP002380.3| Homo sapiens genomic DNA, chromosome 11 clone:RP...	40	8.1
352	dbj|AP003473.2| Homo sapiens genomic DNA, chromosome 8q23, clone...	40	8.1
353	gb|BC111559.1| Homo sapiens hypothetical protein FLJ10884, mRNA ...	40	8.1
354	emb|BX927385.15| Zebrafish DNA sequence from clone DKEY-76P7 in ...	40	8.1
355	emb|AL844850.9| Mouse DNA sequence from clone RP23-255B16 on chr...	40	8.1
356	gb|AC004770.1|AC004770 Homo sapiens chromosome 11, BAC CIT-HSP-3...	40	8.1
357	gb|AC150892.2| Mus musculus BAC clone RP24-383C4 from 5, complet...	40	8.1
358	emb|AL672244.15| Mouse DNA sequence from clone RP23-43I8 on chro...	40	8.1
359	dbj|AP005356.2| Homo sapiens genomic DNA, chromosome 8q23, clone...	40	8.1
360	dbj|AB051499.1| Homo sapiens mRNA for KIAA1712 protein, partial cds	40	8.1

---

>emb|Z77764.1|HVZ77764 H.vulgare chloroplast rpoA gene
          Length = 1358

 Score = 1084 bits (547), Expect = 0.0
 Identities = 580/596 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaacygtcaattctcata 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115924.1| Hordeum pusillum RNA polymerase alpha subunit (rpoA) gene, complete
            cds; chloroplast gene for chloroplast product
          Length = 1367

 Score = 1080 bits (545), Expect = 0.0
 Identities = 580/596 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115923.1| Hordeum murinum clone Hormur2-CIho15683 RNA polymerase alpha subunit
            (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1354

 Score = 1080 bits (545), Expect = 0.0
 Identities = 580/596 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115922.1| Hordeum murinum clone Hormur1-PI247054 RNA polymerase alpha subunit
            (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1354

 Score = 1080 bits (545), Expect = 0.0
 Identities = 580/596 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115919.1| Hordeum bulbosum RNA polymerase alpha subunit (rpoA) gene, complete
            cds; chloroplast gene for chloroplast product
          Length = 1368

 Score = 1080 bits (545), Expect = 0.0
 Identities = 580/596 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115918.1| Hordeum brevisubulatum RNA polymerase alpha subunit (rpoA) gene,
            complete cds; chloroplast gene for chloroplast product
          Length = 1354

 Score = 1080 bits (545), Expect = 0.0
 Identities = 580/596 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>emb|Z79500.1|HEZ79500 H.erectifolium chloroplast rpoA gene
          Length = 1358

 Score = 1080 bits (545), Expect = 0.0
 Identities = 580/596 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>emb|Z77762.1|HMZ77762 Hordeum murinum subsp. glaucum chloroplast rpoA gene
          Length = 1345

 Score = 1080 bits (545), Expect = 0.0
 Identities = 580/596 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115921.1| Hordeum marinum RNA polymerase alpha subunit (rpoA) gene, complete
            cds; chloroplast gene for chloroplast product
          Length = 1361

 Score = 1072 bits (541), Expect = 0.0
 Identities = 579/596 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattacaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115920.1| Hordeum jubatum RNA polymerase alpha subunit (rpoA) gene, complete
            cds; chloroplast gene for chloroplast product
          Length = 1367

 Score = 1072 bits (541), Expect = 0.0
 Identities = 579/596 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattagccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115917.1| Hordeum brachyantherum RNA polymerase alpha subunit (rpoA) gene,
            complete cds; chloroplast gene for chloroplast product
          Length = 1367

 Score = 1072 bits (541), Expect = 0.0
 Identities = 579/596 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattagccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>emb|Z77763.1|HMZ77763 Hordeum marinum subsp. gussoneanum chloroplast rpoA gene
          Length = 1352

 Score = 1072 bits (541), Expect = 0.0
 Identities = 579/596 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattacaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>emb|Z77761.1|HBZ77761 H.brachyantherum chloroplast rpoA gene
          Length = 1358

 Score = 1072 bits (541), Expect = 0.0
 Identities = 579/596 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattagccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115968.1| Psathyrostachys juncea RNA polymerase alpha subunit (rpoA) gene,
            complete cds; chloroplast gene for chloroplast product
          Length = 1356

 Score = 1057 bits (533), Expect = 0.0
 Identities = 577/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtaaaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115967.1| Psathyrostachys fragilis RNA polymerase alpha subunit (rpoA) gene,
            complete cds; chloroplast gene for chloroplast product
          Length = 1355

 Score = 1057 bits (533), Expect = 0.0
 Identities = 577/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1131 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1072

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1071 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1012

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1011 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 952

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 951  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 892

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 832

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 831  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtaaaaaaggaaga 772

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 712

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 652

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 651  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 592

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 536

---

>emb|Z77753.1|PFZ77753 Psathyrostachys fragilis subsp. villosus chloroplast rpoA gene
          Length = 1347

 Score = 1057 bits (533), Expect = 0.0
 Identities = 577/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtaaaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>emb|Z77752.1|PFZ77752 Psathyrostachys fragilis subsp. fragilis chloroplast rpoA gene
          Length = 1347

 Score = 1057 bits (533), Expect = 0.0
 Identities = 577/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtaaaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY607070.1| Psathyrostachys rupestris subsp. rupestris voucher H6701 RNA
            polymerase alpha subunit (rpoA) gene, complete cds;
            chloroplast
          Length = 1356

 Score = 1057 bits (533), Expect = 0.0
 Identities = 577/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1082

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1022

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 962

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 961  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 902

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 842

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 841  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtaaaaaaggaaga 782

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 722

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 662

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 661  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 602

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 546

---

>gb|AY607068.1| Psathyrostachys huashanica voucher H3087 RNA polymerase alpha subunit
            (rpoA) gene, complete cds; chloroplast
          Length = 1371

 Score = 1057 bits (533), Expect = 0.0
 Identities = 577/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1082

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1022

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 962

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 961  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 902

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 842

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 841  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtaaaaaaggaaga 782

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 722

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 662

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 661  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 602

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 546

---

>gb|AY607067.1| Psathyrostachys fragilis subsp. villosus voucher H4378 RNA polymerase
            alpha subunit (rpoA) gene, complete cds; chloroplast
          Length = 1372

 Score = 1057 bits (533), Expect = 0.0
 Identities = 577/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1082

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1022

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 962

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 961  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 902

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 842

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 841  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtaaaaaaggaaga 782

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 722

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 662

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 661  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 602

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 546

---

>gb|AY607066.1| Psathyrostachys fragilis subsp. villosus voucher H4375 RNA polymerase
            alpha subunit (rpoA) gene, complete cds; chloroplast
          Length = 1372

 Score = 1057 bits (533), Expect = 0.0
 Identities = 577/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1082

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1022

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 962

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 961  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 902

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 842

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 841  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtaaaaaaggaaga 782

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 722

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 662

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 661  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 602

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 546

---

>gb|AY607062.1| Psathyrostachys lanuginosa isolate A voucher H8803 RNA polymerase
            alpha subunit (rpoA) gene, complete cds; chloroplast
          Length = 1372

 Score = 1057 bits (533), Expect = 0.0
 Identities = 577/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1082

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1022

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 962

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 961  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 902

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 842

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 841  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtaaaaaaggaaga 782

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 722

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 662

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 661  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 602

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 546

---

>gb|AY607061.1| Psathyrostachys juncea voucher H7544 RNA polymerase alpha subunit
            (rpoA) gene, complete cds; chloroplast
          Length = 1372

 Score = 1057 bits (533), Expect = 0.0
 Identities = 577/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1082

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1022

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 962

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 961  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 902

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 842

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 841  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtaaaaaaggaaga 782

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 722

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 662

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 661  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 602

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 546

---

>gb|AY607065.1| Psathyrostachys fragilis subsp. secaliformis voucher H4348 RNA
            polymerase alpha subunit (rpoA) gene, complete cds;
            chloroplast
          Length = 1371

 Score = 1051 bits (530), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1082

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1022

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 962

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 961  caattatacgttctagaagtcaattctaattgatcaatnaaaatacaattcaatggaatt 902

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 842

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 841  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtaaaaaaggaaga 782

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 722

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 662

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 661  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 602

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 546

---

>gb|AY362785.1| Elymus repens clone Elyrep6 RNA polymerase alpha subunit (rpoA) gene,
            complete cds; chloroplast gene for chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY362784.1| Elymus repens clone Elyrep5 RNA polymerase alpha subunit (rpoA) gene,
            complete cds; chloroplast gene for chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY362783.1| Elymus repens clone Elyrep4 RNA polymerase alpha subunit (rpoA) gene,
            complete cds; chloroplast gene for chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY362782.1| Elymus repens clone Elyrep3 RNA polymerase alpha subunit (rpoA) gene,
            complete cds; chloroplast gene for chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY362781.1| Elymus repens clone Elyrep2 RNA polymerase alpha subunit (rpoA) gene,
            complete cds; chloroplast gene for chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY362780.1| Elymus repens clone Elyrep1 RNA polymerase alpha subunit (rpoA) gene,
            complete cds; chloroplast gene for chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115959.1| Pseudoroegneria spicata clone Psespi8-D2839 RNA polymerase alpha
            subunit (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115958.1| Pseudoroegneria spicata clone Psespi4-D2844 RNA polymerase alpha
            subunit (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115957.1| Pseudoroegneria spicata clone Psespi3-PI610986 RNA polymerase alpha
            subunit (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115956.1| Pseudoroegneria spicata clone Psespi2-PI236681 RNA polymerase alpha
            subunit (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1341

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1119 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1060

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1059 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1000

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 940

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 939  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 880

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 820

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 819  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 760

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 759  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 700

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 640

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 639  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 580

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 524

---

>gb|AY115955.1| Pseudoroegneria libanotica RNA polymerase alpha subunit (rpoA) gene,
            complete cds; chloroplast gene for chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115952.1| Peridictyon sanctum RNA polymerase alpha subunit (rpoA) gene,
            complete cds; chloroplast gene for chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115950.1| Henrardia persica RNA polymerase alpha subunit (rpoA) gene, complete
            cds; chloroplast gene for chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115949.1| Eremopyrum orientale clone Ereori-H5555 RNA polymerase alpha subunit
            (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1355

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115947.1| Eremopyrum bonaepartis clone Erebon2-H5569 RNA polymerase alpha
            subunit (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115946.1| Eremopyrum bonaepartis clone Erebon1-H5554 RNA polymerase alpha
            subunit (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1355

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115945.1| Elymus wawawaiensis clone Elywaw3-PI598812 RNA polymerase alpha
            subunit (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115944.1| Elymus wawawaiensis clone Elywaw1-PI285272 RNA polymerase alpha
            subunit (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115940.1| Elymus trachycaulus clone Elytra3-PI452446 RNA polymerase alpha
            subunit (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115939.1| Elymus trachycaulus clone Elytra1-PI372500 RNA polymerase alpha
            subunit (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115938.1| Elymus lanceolatus clone Elylan3-PI531623 RNA polymerase alpha
            subunit (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115937.1| Elymus lanceolatus clone Elylan1-R-13-6-10 RNA polymerase alpha
            subunit (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115935.1| Elymus glaucus clone Elygla7-PI593652 RNA polymerase alpha subunit
            (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115934.1| Elymus glaucus clone Elygla6-W610215 RNA polymerase alpha subunit
            (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115933.1| Elymus glaucus clone Elygla4-RJMG130 RNA polymerase alpha subunit
            (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115932.1| Elymus elymoides RNA polymerase alpha subunit (rpoA) gene, complete
            cds; chloroplast gene for chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115931.1| Elymus ciliaris RNA polymerase alpha subunit (rpoA) gene, complete
            cds; chloroplast gene for chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115930.1| Elymus canadensis clone Elycan4-PI531568 RNA polymerase alpha subunit
            (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115928.1| Elymus canadensis clone Elycan1-MEBarkworth97-86 RNA polymerase alpha
            subunit (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115927.1| Elymus californicus RNA polymerase alpha subunit (rpoA) gene,
            complete cds; chloroplast gene for chloroplast product
          Length = 1355

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            ||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaatggcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatatgaaaactgtcaattctcata 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115914.1| Agropyron mongolicum RNA polymerase alpha subunit (rpoA) gene,
            complete cds; chloroplast gene for chloroplast product
          Length = 1355

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115912.1| Agropyron cristatum clone Agrcri1-C-3-6-10 RNA polymerase alpha
            subunit (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1355

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|DQ159334.1| Elymus dentatus RNA polymerase subunit a (rpoA) gene, complete cds;
            plastid
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|DQ159333.1| Elymus caucasicus RNA polymerase subunit a (rpoA) gene, complete cds;
            plastid
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|DQ159332.1| Elymus abolinii RNA polymerase subunit a (rpoA) gene, complete cds;
            plastid
          Length = 1354

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>emb|Z79501.1|FSZ79501 Festucopsis serpentini chloroplast rpoA gene
          Length = 1346

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>emb|Z77771.1|ACZ77771 A.cristatum chloroplast rpoA gene
          Length = 1346

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>emb|Z77755.1|PRZ77755 P.rupestris chloroplast rpoA gene
          Length = 1346

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgtaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatataattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>emb|Z77749.1|PSZ77749 P.sanctum chloroplast rpoA gene
          Length = 1345

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>emb|Z77748.1|HPZ77748 H.persica chloroplast rpoA gene
          Length = 1345

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>emb|Z77746.1|ETZ77746 E.triticeum chloroplast rpoA gene
          Length = 1346

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>emb|Z77744.1|PSZ77744 P.spicata chloroplast rpoA gene
          Length = 1345

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>emb|Z77743.1|LEZ77743 Elytrigia elongata chloroplast rpoA gene
          Length = 1345

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY607071.1| Psathyrostachys caduca voucher H6702 RNA polymerase alpha subunit
            (rpoA) gene, complete cds; chloroplast
          Length = 1348

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagattc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtaaaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY607063.1| Psathyrostachys lanuginosa isolate B voucher H8803 RNA polymerase
            alpha subunit (rpoA) gene, complete cds; chloroplast
          Length = 1371

 Score = 1049 bits (529), Expect = 0.0
 Identities = 576/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1082

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1022

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 962

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 961  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 902

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 842

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 841  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtaaaaaaggaaga 782

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 722

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 662

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 661  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 602

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 601  tgatagttctttctgagttctgtctgatatccacgatctctcttgatccgtaaatc 546

---

>gb|AY115966.1| Thinopyrum scirpeum RNA polymerase alpha subunit (rpoA) gene,
            complete cds; chloroplast gene for chloroplast product
          Length = 1354

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaagggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctctgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115964.1| Thinopyrum bessarabicum RNA polymerase alpha subunit (rpoA) gene,
            complete cds; chloroplast gene for chloroplast product
          Length = 1354

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaagggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctctgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115963.1| Taeniatherum caput-medusae RNA polymerase alpha subunit (rpoA) gene,
            complete cds; chloroplast gene for chloroplast product
          Length = 1352

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1078

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1077 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1018

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 958

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 957  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 898

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 838

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 837  aacctgtttttattttcttcgaaactagcgccctcttcctccgcgtgtagaaaaggaaga 778

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 777  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 718

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 658

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 657  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 598

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 542

---

>gb|AY115954.1| Pseudoroegneria strigosa clone Psestr2-PI531755 RNA polymerase alpha
            subunit (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1347

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccatttccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115953.1| Pseudoroegneria strigosa clone Psestr1-MA-109-31-50 RNA polymerase
            alpha subunit (rpoA) gene, complete cds; chloroplast gene
            for chloroplast product
          Length = 1347

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccatttccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115948.1| Eremopyrum orientale clone Eredis-H5555 RNA polymerase alpha subunit
            (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1355

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatctttttttaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115943.1| Elymus virginicus clone Elyvir6-RJMG163 RNA polymerase alpha subunit
            (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1354

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttggattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115942.1| Elymus virginicus clone Elyvir2-PI490361 RNA polymerase alpha subunit
            (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1354

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttggattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115941.1| Elymus virginicus clone Elyvir1-PI436945 RNA polymerase alpha subunit
            (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1354

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttggattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115936.1| Elymus hystrix RNA polymerase alpha subunit (rpoA) gene, complete
            cds; chloroplast gene for chloroplast product
          Length = 1354

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggattcagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115929.1| Elymus canadensis clone Elycan2-PI578675 RNA polymerase alpha subunit
            (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1354

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttggattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115926.1| Haynaldia villosa clone Dasvil2-PI470279 RNA polymerase alpha subunit
            (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1354

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcatgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115925.1| Haynaldia villosa clone Dasvil1-PI251478 RNA polymerase alpha subunit
            (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1354

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcatgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115913.1| Agropyron cristatum clone Agrcri2-PI281862 RNA polymerase alpha
            subunit (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1355

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttctgtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115911.1| Aegilops uniaristata RNA polymerase alpha subunit (rpoA) gene,
            complete cds; chloroplast gene for chloroplast product
          Length = 1352

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1078

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1077 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1018

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 958

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 957  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 898

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 838

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 837  aacctgtttttattttcttcgaaactagcgccctcttcctccgcgtgtagaaaaggaaga 778

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 777  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 718

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 658

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 657  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 598

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 542

---

>gb|AY115908.1| Aegilops markgrafii RNA polymerase alpha subunit (rpoA) gene,
            complete cds; chloroplast gene for chloroplast product
          Length = 1352

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1078

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1077 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1018

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 958

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 957  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 898

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 838

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 837  aacctgtttttattttcttcgaaactagcgccctcttcctccgcgtgtagaaaaggaaga 778

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 777  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 718

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 658

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 657  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 598

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 542

---

>emb|Z77770.1|FFZ77770 F.festucoides chloroplast rpoA gene
          Length = 1346

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttatttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcaaatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>emb|Z77769.1|TBZ77769 T.bessarabicum chloroplast rpoA gene
          Length = 1345

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaagggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctctgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>emb|Z77760.1|TCZ77760 T.caput-medusae chloroplast rpoA gene
          Length = 1343

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1078

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1077 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1018

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 958

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 957  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 898

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 838

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 837  aacctgtttttattttcttcgaaactagcgccctcttcctccgcgtgtagaaaaggaaga 778

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 777  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 718

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 658

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 657  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 598

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 542

---

>emb|Z77758.1|PTZ77758 P.tauschii chloroplast rpoA gene
          Length = 1343

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1078

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1077 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1018

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 958

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 957  caattatacgttctagaagtcaattctaattgatcaataaaaatagaattcaatggaatt 898

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 838

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 837  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 778

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 777  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 718

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 658

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 657  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 598

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 542

---

>emb|Z77757.1|CMZ77757 C.monococcum chloroplast rpoA gene
          Length = 1343

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1078

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1077 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1018

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 958

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 957  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 898

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 838

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 837  aacctgtttttattttcttcgaaactagcgccctcttcctccgcgtgtagaaaaggaaga 778

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 777  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 718

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 658

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 657  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 598

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 542

---

>emb|Z77756.1|AMZ77756 A.muticum chloroplast rpoA gene
          Length = 1343

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1078

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1077 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1018

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 958

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 957  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 898

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 838

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 837  aacctgtttttattttcttcgaaactagcgccctcttcctccgcgtgtagaaaaggaaga 778

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 777  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 718

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 658

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 657  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 598

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 542

---

>emb|Z77745.1|EDZ77745 E.distans chloroplast rpoA gene
          Length = 1346

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatctttttttaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>emb|Z77742.1|CCZ77742 C.comosum chloroplast rpoA gene
          Length = 1343

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1078

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1077 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1018

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 958

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 957  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 898

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 838

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 837  aacctgtttttattttcttcgaaactagcgccctcttcctccgcgtgtagaaaaggaaga 778

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 777  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 718

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 658

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 657  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 598

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 542

---

>emb|Z77741.1|DVZ77741 D.villosum chloroplast rpoA gene
          Length = 1345

 Score = 1041 bits (525), Expect = 0.0
 Identities = 575/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcatgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>emb|Z77754.1|PSZ77754 P.stoloniformis chloroplast rpoA gene
          Length = 1355

 Score = 1039 bits (524), Expect = 0.0
 Identities = 574/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtaaaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagnnnctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY607064.1| Psathyrostachys lanuginosa isolate C voucher H8803 RNA polymerase
            alpha subunit (rpoA) gene, complete cds; chloroplast
          Length = 1371

 Score = 1037 bits (523), Expect = 0.0
 Identities = 574/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1082

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 1022

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 962

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 961  caattatacgttctagaagtcaattctaattgancaataaaaatacaattcaatggaatt 902

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 901  ccttttttgtttttctttagattagttaatcttttttgaaaagtcaaaaggggtggagta 842

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 841  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtaaaaaaggaaga 782

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 722

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 662

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 661  atactataattcacatttcgaacangcatggatacagcatctataggataacttccatct 602

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 546

---

>gb|AY115965.1| Lophopyrum elongatum RNA polymerase alpha subunit (rpoA) gene,
            complete cds; chloroplast gene for chloroplast product
          Length = 1354

 Score = 1033 bits (521), Expect = 0.0
 Identities = 574/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatctttttttaaaagtaaaagggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctctgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115962.1| Secale montanum clone Secmon2-PI206991 RNA polymerase alpha subunit
            (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1352

 Score = 1033 bits (521), Expect = 0.0
 Identities = 574/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1078

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1077 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1018

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 958

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 957  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 898

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 838

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 837  aacctgtttttattttcttcgaaactagcgccctcttcctccgcgtgtagaaaaggaaga 778

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 777  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 718

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 658

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 657  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 598

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 597  tgatagttctttctgagttctgtctgatatccccgatctctcttgatctgtaaatc 542

---

>gb|AY115961.1| Secale cereale RNA polymerase alpha subunit (rpoA) gene, complete
            cds; chloroplast gene for chloroplast product
          Length = 1352

 Score = 1033 bits (521), Expect = 0.0
 Identities = 574/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1078

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1077 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1018

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 958

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 957  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 898

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 838

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 837  aacctgtttttattttcttcgaaactagcgccctcttcctccgcgtgtagaaaaggaaga 778

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 777  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 718

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 658

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 657  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 598

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 597  tgatagttctttctgagttctgtctgatatccccgatctctcttgatctgtaaatc 542

---

>gb|AY115960.1| Secale montanum clone Secmon1-PI440654 RNA polymerase alpha subunit
            (rpoA) gene, complete cds; chloroplast gene for
            chloroplast product
          Length = 1352

 Score = 1033 bits (521), Expect = 0.0
 Identities = 574/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1078

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1077 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1018

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 958

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 957  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 898

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 838

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 837  aacctgtttttattttcttcgaaactagcgccctcttcctccgcgtgtagaaaaggaaga 778

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 777  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 718

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 658

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 657  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 598

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 597  tgatagttctttctgagttctgtctgatatccccgatctctcttgatctgtaaatc 542

---

>gb|AY115915.1| Australopyrum retrofractum RNA polymerase alpha subunit (rpoA) gene,
            complete cds; chloroplast gene for chloroplast product
          Length = 1355

 Score = 1033 bits (521), Expect = 0.0
 Identities = 574/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            ||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaatggcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttcgagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115910.1| Aegilops tauschii RNA polymerase alpha subunit (rpoA) gene, complete
            cds; chloroplast gene for chloroplast product
          Length = 1352

 Score = 1033 bits (521), Expect = 0.0
 Identities = 574/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1078

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1077 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1018

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 958

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 957  caattatacgttctagaagtcaattctaattgatcaataaaaatagaattcaatggaatt 898

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 838

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 837  aacctgtttttattttcttcgaaactagcgccctcttcctccgcgtgtagaaaaggaaga 778

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 777  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 718

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 658

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 657  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 598

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 542

---

>gb|AY115909.1| Aegilops speltoides RNA polymerase alpha subunit (rpoA) gene,
            complete cds; chloroplast gene for chloroplast product
          Length = 1352

 Score = 1033 bits (521), Expect = 0.0
 Identities = 574/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1078

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1077 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1018

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 958

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 957  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 898

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 838

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 837  aacctgtttttattttcttcgaaactagcgccctcttcctccgcgtgtagaaaaggaaga 778

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 777  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttagacttcca 718

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 658

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 657  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 598

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 542

---

>gb|DQ159335.1| Elymus mutabilis RNA polymerase subunit a (rpoA) gene, complete cds;
            plastid
          Length = 1354

 Score = 1033 bits (521), Expect = 0.0
 Identities = 574/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcaattccattaccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>emb|Z77767.1|ARZ77767 A.retrofractum chloroplast rpoA gene
          Length = 1346

 Score = 1033 bits (521), Expect = 0.0
 Identities = 574/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            ||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaatggcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttcgagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>emb|Z77766.1|SSZ77766 S.speltoides chloroplast rpoA gene
          Length = 1343

 Score = 1033 bits (521), Expect = 0.0
 Identities = 574/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1078

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1077 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1018

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 958

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 957  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 898

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 838

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 837  aacctgtttttattttcttcgaaactagcgccctcttcctccgcgtgtagaaaaggaaga 778

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 777  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttagacttcca 718

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 658

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 657  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 598

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 542

---

>emb|Z77759.1|BIZ77759 B.inermis chloroplast rpoA gene
          Length = 1345

 Score = 1033 bits (521), Expect = 0.0
 Identities = 574/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1132 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgt 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1072 ttctctagagtgtcccatatatgttttcgatcttccatacgaaaactgtcaattctcata 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacagttcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatctttttttaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score = 1033 bits (521), Expect = 0.0
 Identities = 574/596 (96%)
 Strand = Plus / Plus

                                                                         
Query: 1     aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
             |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74105 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 74164

                                                                         
Query: 61    ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 74165 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 74224

                                                                         
Query: 121   agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74225 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 74284

                                                                         
Query: 181   caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
             |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 74285 caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 74344

                                                                         
Query: 241   ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
             ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74345 ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 74404

                                                                         
Query: 301   aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
             |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 74405 aacctgtttttattttcttcgaaactagcgccctcttcctccgcgtgtagaaaaggaaga 74464

                                                                         
Query: 361   aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
             ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 74465 aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttagacttcca 74524

                                                                         
Query: 421   ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74525 ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 74584

                                                                         
Query: 481   atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
             |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 74585 atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 74644

                                                                     
Query: 541   tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74645 tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 74700

---

>emb|Z77768.1|AVZ77768 A.velutinum chloroplast rpoA gene
          Length = 1346

 Score = 1029 bits (519), Expect = 0.0
 Identities = 573/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            ||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaatggcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactggtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttcgagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatgratacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>emb|Z77765.1|SSZ77765 S.strictum chloroplast rpoA gene
          Length = 1343

 Score = 1027 bits (518), Expect = 0.0
 Identities = 573/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1078

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 1077 ttctctagagtgtcccatatatgttttctatcttccatacgaaaacngtcaattctcaga 1018

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 958

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 957  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 898

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 838

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 837  aacctgtttttattttcttcgaaactagcgccctcttcctccgcgtgtagaaaaggaaga 778

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 777  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 718

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 658

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 657  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 598

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 597  tgatagttctttctgagttctgtctgatatccccgatctctcttgatctgtaaatc 542

---

>gb|AY115916.1| Australopyrum velutinum RNA polymerase alpha subunit (rpoA) gene,
            complete cds; chloroplast gene for chloroplast product
          Length = 1355

 Score = 1025 bits (517), Expect = 0.0
 Identities = 573/596 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            ||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaatggcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactggtgccctcttcctccgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttcgagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccatct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>gb|AY115951.1| Heteranthelium piliferum RNA polymerase alpha subunit (rpoA) gene,
            complete cds; chloroplast gene for chloroplast product
          Length = 1354

 Score = 1017 bits (513), Expect = 0.0
 Identities = 572/596 (95%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaaggaaagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctctgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccgtct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttatgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>emb|Z77750.1|HPZ77750 H.piliferum chloroplast rpoA gene
          Length = 1345

 Score = 1013 bits (511), Expect = 0.0
 Identities = 571/596 (95%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 1132 aaaaaattgcaatggatttaaaaggaaagtttattcttaagtaaatcaattgggagatgc 1073

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1072 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1013

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 953

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 952  caattayacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 893

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 833

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 832  aacctgtttttattttcttcgaaactagtgccctcttcctctgcgtgtagaaaaggaaga 773

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttaaacttcca 713

                                                                        
Query: 421  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 653

                                                                        
Query: 481  atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
            |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 652  atactataattcacatttcgaacaggcatggatacagcatctataggataacttccgtct 593

                                                                    
Query: 541  tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgatagttctttatgagttctgtctgatatccacgatctctcttgatctgtaaatc 537

---

>emb|X15595.1|CHTARPOA Wheat chloroplast rpoA gene for RNA polymerase alpha-subunit and petD
            gene 3' region
          Length = 1320

 Score =  971 bits (490), Expect = 0.0
 Identities = 569/597 (95%), Gaps = 2/597 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||   |||||||||||||||||||||||||||||||||||
Sbjct: 1103 aaaaaattgcaatggatttaaatgcagagtttattcttaagtaaatcaattgggagatgc 1044

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1043 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 984

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 924

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 923  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 864

                                                                        
Query: 241  ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
            ||            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863  ccttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 804

                                                                        
Query: 301  aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
            |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 803  aacctgtttttattttcttcgaaactagcgccctcttcctccgcgtgtagaaaaggaaga 744

                                                                        
Query: 361  aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
            ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 743  aataaatcaatcaaattacgagaagcctcataaagtgcttccttaggggttagacttcca 684

                                                                        
Query: 421  ttag-tccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaa 479
            |||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 683  ttagatccatatt-ctagaaaaagtatctcgagtttttcatttccattcccacaagaaaa 625

                                                                        
Query: 480  aatactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatc 539
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 624  aatactataattcacatttcgaacaggcatggatacagcatctataggataacttccatc 565

                                                                     
Query: 540  ttgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564  ttgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 508

---

>gb|AY607069.1| Psathyrostachys caduca voucher H6700 RNA polymerase alpha subunit
            (rpoA) gene, complete cds; chloroplast
          Length = 1357

 Score =  831 bits (419), Expect = 0.0
 Identities = 458/475 (96%)
 Strand = Plus / Minus

                                                                        
Query: 122  gatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttagac 181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 gatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttagac 961

                                                                        
Query: 182  aattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaattc 241
            ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 960  aattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaattc 901

                                                                        
Query: 242  cnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaa 301
            |            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900  cttttttgtttttctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaa 841

                                                                        
Query: 302  acctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaa 361
            |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 840  acctgtttttattttcttcgaaactagtgccctcttcctccgcgtgtaaaaaaggaagaa 781

                                                                        
Query: 362  ataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttccat 421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780  ataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttccat 721

                                                                        
Query: 422  tagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaa 481
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720  tagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaa 661

                                                                        
Query: 482  tactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatctt 541
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 660  tactataattcacatttcgaacaggcatggatacagcatctataggataacttccatctt 601

                                                                   
Query: 542  gatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 596
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600  gatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaaatc 546



 Score =  127 bits (64), Expect = 4e-26
 Identities = 70/73 (95%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aaaaaattscaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1082

                         
Query: 61   ttctctagagtgt 73
            |||||||||||||
Sbjct: 1081 ttctctagagtgt 1069

---

>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score =  829 bits (418), Expect = 0.0
 Identities = 547/593 (92%), Gaps = 1/593 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
              |||||| |||||||  |||||| |||||  || |||||| ||||||||||||||||||||
Sbjct: 138436 aaaaaattgcaatga-tttaaagcgagaacttgttcttaggtaaatcaattgggagatgc 138494

                                                                          
Query: 61     ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
              ||||||||||||||||||||  |||||| |||||||||||||||||| | ||||| ||||
Sbjct: 138495 ttctctagagtgtcccatatcagttttccatcttccatacgaaaactattaattcgcata 138554

                                                                          
Query: 121    agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 138555 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggcccttttgaga 138614

                                                                          
Query: 181    caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
              |||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 138615 caattatacgttctagaaggcaattctaattgatcaataaaaatacaattcaatggaatt 138674

                                                                          
Query: 241    ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
              ||            |||||||||||| |||||||||||||| || |||||||||||||| 
Sbjct: 138675 ccttttttgtttttctttagattagtgaatcttttttgaaaggttaaaaggggtggagtt 138734

                                                                          
Query: 301    aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
              ||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||
Sbjct: 138735 aacctgtttttattttcttcgaaactagtgccctcttcctctgtgtgtataaaaggaaga 138794

                                                                          
Query: 361    aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
              |||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 138795 aataaatcaatcaaattacgagaagcttcataaagcgcttctttaggagttaaacttcca 138854

                                                                          
Query: 421    ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
              || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138855 ttcgtccatatttctaaaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 138914

                                                                          
Query: 481    atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138915 atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 138974

                                                                   
Query: 541    tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaa 593
              ||| |||||||||||||||| || |||||||| ||||||||||||||||||||
Sbjct: 138975 tgagagttctttctgagttccgtatgatatccgcgatctctcttgatctgtaa 139027

---

>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score =  829 bits (418), Expect = 0.0
 Identities = 547/593 (92%), Gaps = 1/593 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
             |||||| |||||||  |||||| |||||  || |||||| ||||||||||||||||||||
Sbjct: 76810 aaaaaattgcaatga-tttaaagcgagaacttgttcttaggtaaatcaattgggagatgc 76868

                                                                         
Query: 61    ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
             ||||||||||||||||||||  |||||| |||||||||||||||||| | ||||| ||||
Sbjct: 76869 ttctctagagtgtcccatatcagttttccatcttccatacgaaaactattaattcgcata 76928

                                                                         
Query: 121   agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 76929 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggcccttttgaga 76988

                                                                         
Query: 181   caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
             |||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 76989 caattatacgttctagaaggcaattctaattgatcaataaaaatacaattcaatggaatt 77048

                                                                         
Query: 241   ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
             ||            |||||||||||| |||||||||||||| || |||||||||||||| 
Sbjct: 77049 ccttttttgtttttctttagattagtgaatcttttttgaaaggttaaaaggggtggagtt 77108

                                                                         
Query: 301   aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
             ||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||
Sbjct: 77109 aacctgtttttattttcttcgaaactagtgccctcttcctctgtgtgtataaaaggaaga 77168

                                                                         
Query: 361   aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
             |||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 77169 aataaatcaatcaaattacgagaagcttcataaagcgcttctttaggagttaaacttcca 77228

                                                                         
Query: 421   ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
             || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77229 ttcgtccatatttctaaaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 77288

                                                                         
Query: 481   atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77289 atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 77348

                                                                  
Query: 541   tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaa 593
             ||| |||||||||||||||| || |||||||| ||||||||||||||||||||
Sbjct: 77349 tgagagttctttctgagttccgtatgatatccgcgatctctcttgatctgtaa 77401

---

>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  821 bits (414), Expect = 0.0
 Identities = 546/593 (92%), Gaps = 1/593 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
             |||||| |||||||  |||||| |||||  || |||||| ||||||||||||||||||||
Sbjct: 76154 aaaaaattgcaatga-tttaaagcgagaacttgttcttaggtaaatcaattgggagatgc 76212

                                                                         
Query: 61    ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
             ||||||||||||||||||||  |||||| |||||||||||||||||| | ||||  ||||
Sbjct: 76213 ttctctagagtgtcccatatcagttttccatcttccatacgaaaactattaatttgcata 76272

                                                                         
Query: 121   agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 76273 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggcccttttgaga 76332

                                                                         
Query: 181   caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
             |||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 76333 caattatacgttctagaaggcaattctaattgatcaataaaaatacaattcaatggaatt 76392

                                                                         
Query: 241   ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
             ||            |||||||||||| |||||||||||||| || |||||||||||||| 
Sbjct: 76393 ccttttttgtttttctttagattagtgaatcttttttgaaaggttaaaaggggtggagtt 76452

                                                                         
Query: 301   aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
             ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 76453 aacctgtttttattttcttcgaaactagtgccctcttcctctgtgtgtagaaaaggaaga 76512

                                                                         
Query: 361   aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
             |||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 76513 aataaatcaatcaaattacgagaagcttcataaagcgcttctttaggagttaaacttcca 76572

                                                                         
Query: 421   ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
             || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76573 ttcgtccatatttctaaaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 76632

                                                                         
Query: 481   atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76633 atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 76692

                                                                  
Query: 541   tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaa 593
             ||| |||||||||||||||| || |||||| | ||||||||||||||||||||
Sbjct: 76693 tgagagttctttctgagttccgtatgatatgcgcgatctctcttgatctgtaa 76745

---

>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score =  821 bits (414), Expect = 0.0
 Identities = 546/593 (92%), Gaps = 1/593 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
             |||||| |||||||  |||||| |||||  || |||||| ||||||||||||||||||||
Sbjct: 76169 aaaaaattgcaatga-tttaaagcgagaacttgttcttaggtaaatcaattgggagatgc 76227

                                                                         
Query: 61    ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
             ||||||||||||||||||||  |||||| |||||||||||||||||| | ||||  ||||
Sbjct: 76228 ttctctagagtgtcccatatcagttttccatcttccatacgaaaactattaatttgcata 76287

                                                                         
Query: 121   agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 76288 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggcccttttgaga 76347

                                                                         
Query: 181   caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
             |||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 76348 caattatacgttctagaaggcaattctaattgatcaataaaaatacaattcaatggaatt 76407

                                                                         
Query: 241   ccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagta 300
             ||            |||||||||||| |||||||||||||| || |||||||||||||| 
Sbjct: 76408 ccttttttgtttttctttagattagtgaatcttttttgaaaggttaaaaggggtggagtt 76467

                                                                         
Query: 301   aacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaaga 360
             ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 76468 aacctgtttttattttcttcgaaactagtgccctcttcctctgtgtgtagaaaaggaaga 76527

                                                                         
Query: 361   aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
             |||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 76528 aataaatcaatcaaattacgagaagcttcataaagcgcttctttaggagttaaacttcca 76587

                                                                         
Query: 421   ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
             || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76588 ttcgtccatatttctaaaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 76647

                                                                         
Query: 481   atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76648 atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 76707

                                                                  
Query: 541   tgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaa 593
             ||| |||||||||||||||| || |||||| | ||||||||||||||||||||
Sbjct: 76708 tgagagttctttctgagttccgtatgatatgcgcgatctctcttgatctgtaa 76760

---

>gb|BT018701.1| Zea mays clone EL01N0515A02.d mRNA sequence
          Length = 1490

 Score =  799 bits (403), Expect = 0.0
 Identities = 545/594 (91%), Gaps = 2/594 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||  |||||| |||||  || |||||| ||||||||||||||||||||
Sbjct: 1446 aaaaaattgcaatga-tttaaagcgagaacttgttcttaggtaaatcaattgggagatgc 1388

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||  |||||| |||||||||||||||||| | ||||  ||||
Sbjct: 1387 ttctctagagtgtcccatatcagttttccatcttccatacgaaaactattaatttgcata 1328

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggcccttttt-ag 179
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||
Sbjct: 1327 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggcccttgtggag 1268

                                                                        
Query: 180  acaattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaat 239
            ||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 1267 acaattatacgttctagaaggcaattctaattgatcaataaaaatacaattcaatggaat 1208

                                                                        
Query: 240  tccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtggagt 299
            |||            |||||||||||| |||||||||||||| || ||||||||||||||
Sbjct: 1207 tccttttttgtttttctttagattagtgaatcttttttgaaaggttaaaaggggtggagt 1148

                                                                        
Query: 300  aaacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaag 359
             ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 1147 taacctgtttttattttcttcgaaactagtgccctcttcctctgtgtgtagaaaaggaag 1088

                                                                        
Query: 360  aaataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcc 419
            ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||
Sbjct: 1087 aaataaatcaatcaaattacgagaagcttcataaagcgcttctttaggagttaaacttcc 1028

                                                                        
Query: 420  attagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaa 479
            ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 attcgtccatatttctaaaaaaagtatctcgtgtttttcatttccattcccacaagaaaa 968

                                                                        
Query: 480  aatactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatc 539
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967  aatactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatc 908

                                                                  
Query: 540  ttgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaa 593
            |||| |||||||||||||||| || |||||| | ||||||||||||||||||||
Sbjct: 907  ttgagagttctttctgagttccgtatgatatgcgcgatctctcttgatctgtaa 854

---

>emb|X07810.1|CHZMRPOA Zea mays chloroplast rpoA gene for RNA polymerase alpha-subunit
          Length = 1627

 Score =  680 bits (343), Expect = 0.0
 Identities = 539/600 (89%), Gaps = 9/600 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||  |||||| |||||  || |||||| ||||||||||||||||||||
Sbjct: 1352 aaaaaattgcaatga-tttaaagcgagaacttgttcttaggtaaatcaattgggagatgc 1294

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||||||||  |||||| ||||||||||| |||||| | |||| | |||
Sbjct: 1293 ttctctagagtgtcccatatcagttttccatcttccataccaaaactattaattttgata 1234

                                                                        
Query: 121  agatcttcttcagtctt-actcaaaaggtccaatagtgt--atg-tatattggccctttt 176
            ||||||||||||||||| ||| | ||||||||||||||   ||| |||||||||||||||
Sbjct: 1233 agatcttcttcagtcttcact-agaaggtccaatagtgctgatggtatattggccctttt 1175

                                                                        
Query: 177  tagacaattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatgg 236
             ||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 1174 gagacaattataggttctagaaggcaattctaattgatcaataaaaatacaattcaatgg 1115

                                                                        
Query: 237  aattccnnnnnnnnnnnnctttagattagttaatcttttttgaaaagtaaaaaggggtgg 296
            ||||||            |||||||||||| |||||||||||||| || |||||||||||
Sbjct: 1114 aattccttttttgtttttctttagattagtgaatcttttttgaaaggttaaaaggggtgg 1055

                                                                        
Query: 297  agtaaacctgtttttattttcttcgaaactagtgccctcttcctcggcgtgtagaaaagg 356
            ||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 1054 agttaacctgtttttattttcttcgaaactagtgccctcttcctctgtgtgtagaaaagg 995

                                                                        
Query: 357  aagaaataaatcaatcaaattacgagaagcctcataaag--cgc-ttccttaggggttaa 413
            |||||||||||||||||||||||||||||| |||||||   ||| ||| ||||| |||||
Sbjct: 994  aagaaataaatcaatcaaattacgagaagcttcataaatgccgccttctttaggagttaa 935

                                                                        
Query: 414  acttccattagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccaca 473
              ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 934  ttttccattcgtccatatttctaaaaaaagtatctcgtgtttttcatttccattcccaca 875

                                                                        
Query: 474  agaaaaaatactataattcacatttcgaacaggcatgaatacagcatctataggataact 533
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874  agaaaaaatactataattcacatttcgaacaggcatgaatacagcatctataggataact 815

                                                                        
Query: 534  tccatcttgatagttctttctgagttctgtctgatatccacgatctctcttgatctgtaa 593
            |||||||||| |||||||||||||||| || |||||| | ||||||||||||||||||||
Sbjct: 814  tccatcttgagagttctttctgagttccgtatgatatgcgcgatctctcttgatctgtaa 755

---

>emb|Z77751.1|CDZ77751 C.delileana chloroplast rpoA gene
          Length = 1343

 Score =  644 bits (325), Expect = 0.0
 Identities = 337/341 (98%)
 Strand = Plus / Minus

                                                                       
Query: 256 tttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttattt 315
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 tttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttattt 823

                                                                       
Query: 316 tcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaaa 375
           ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 822 tcttcgaaactagcgccctcttcctccgcgtgtagaaaaggaagaaataaatcaatcaaa 763

                                                                       
Query: 376 ttacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttct 435
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 762 ttacgagaagcctcataaagtgcttccttaggggttaaacttccattagtccatatttct 703

                                                                       
Query: 436 agaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcaca 495
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 agaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcaca 643

                                                                       
Query: 496 tttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttctg 555
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tttcgaacaggcatggatacagcatctataggataacttccatcttgatagttctttctg 583

                                                    
Query: 556 agttctgtctgatatccacgatctctcttgatctgtaaatc 596
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 agttctgtctgatatccacgatctctcttgatctgtaaatc 542



 Score =  369 bits (186), Expect = 7e-99
 Identities = 224/242 (92%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 aaaaaattgcaatggatttaaaacgagagtttattcttaagtaaatcaattgggagatgc 1078

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1077 ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcaga 1018

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||||||||||||||||||||||||||||||           | ||||||| |
Sbjct: 1017 agatcttcttcagtcttactcaaaaggtccaatagtgtnnnnnnnnnnncyctttttasa 958

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 957  caattatacgttctagaagtcaattctaattgatcaataaaaatacaattcaatggaatt 898

              
Query: 241  cc 242
            ||
Sbjct: 897  cc 896

---

>gb|DQ069431.1| Typha latifolia RNA polymerase alpha chain (rpoA) gene, partial cds;
            chloroplast
          Length = 1017

 Score =  545 bits (275), Expect = e-152
 Identities = 488/563 (86%)
 Strand = Plus / Minus

                                                                        
Query: 31   ttattcttaagtaaatcaattgggagatgcttctctagagtgtcccatatatgttttcta 90
            ||||||||| |||||||||||| || || ||||| |||||||||| |||| ||||||  |
Sbjct: 1007 ttattcttaggtaaatcaattgcgaaattcttctgtagagtgtccaatatctgttttaca 948

                                                                        
Query: 91   tcttccatacgaaaactgtcaattctcataagatcttcttcagtcttactcaaaaggtcc 150
            |||||||| |||| |   |||||||||||||||||||||| |   |||||||||||||||
Sbjct: 947  tcttccatgcgaagatattcaattctcataagatcttcttgaccattactcaaaaggtcc 888

                                                                        
Query: 151  aatagtgtatgtatattggccctttttagacaattatatgttctagaagttaattctaat 210
            |||| |||||||||||||| |||||| ||||||||||| || |||||||  |||||||||
Sbjct: 887  aataatgtatgtatattggaccttttgagacaattataggtcctagaaggcaattctaat 828

                                                                        
Query: 211  tgatcaataaaaatacaattcaatggaattccnnnnnnnnnnnnctttagattagttaat 270
            || ||||||||||| |||||||||||||||||            ||||||||||||||||
Sbjct: 827  tggtcaataaaaatgcaattcaatggaattccttttttgtttttctttagattagttaat 768

                                                                        
Query: 271  cttttttgaaaagtaaaaaggggtggagtaaacctgtttttattttcttcgaaactagtg 330
            || | |||||| || |||| |||| ||||||||||||||||||||||||||||| || ||
Sbjct: 767  ctatcttgaaaggttaaaaagggtagagtaaacctgtttttattttcttcgaaattaatg 708

                                                                        
Query: 331  ccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaaattacgagaagcctca 390
             |||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 707  tcctcttcctctgcatgtagaaaaggaataaataaatcaatcaaattacgagaagcctca 648

                                                                        
Query: 391  taaagcgcttccttaggggttaaacttccattagtccatatttctagaaaaagtatctcg 450
            ||||| ||||||||||| |||||||||||||| ||||||||||||||||| ||||| || 
Sbjct: 647  taaagtgcttccttaggagttaaacttccatttgtccatatttctagaaatagtatttct 588

                                                                        
Query: 451  tgtttttcatttccattcccacaagaaaaaatactataattcacatttcgaacaggcatg 510
            ||||||||||| ||||||||| |||||  |||||||| |||| |||||||||||||||||
Sbjct: 587  tgtttttcattcccattcccataagaatgaatactatgattcgcatttcgaacaggcatg 528

                                                                        
Query: 511  aatacagcatctataggataacttccatcttgatagttctttctgagttctgtctgatat 570
             ||||||||||||||||||||||||| |||||| |||| ||| || ||||  |  |||||
Sbjct: 527  gatacagcatctataggataacttccgtcttgagagttatttgtgggttccatacgatat 468

                                   
Query: 571  ccacgatctctcttgatctgtaa 593
            || |||||||||||||| |||||
Sbjct: 467  ccgcgatctctcttgatttgtaa 445

---

>gb|DQ069432.1| Yucca schidigera RNA polymerase alpha chain (rpoA) gene, partial cds;
            chloroplast
          Length = 1011

 Score =  504 bits (254), Expect = e-139
 Identities = 449/518 (86%)
 Strand = Plus / Minus

                                                                        
Query: 31   ttattcttaagtaaatcaattgggagatgcttctctagagtgtcccatatatgttttcta 90
            ||||||||| ||||||  |||| || |||||||| |||||||||| |||| ||||||  |
Sbjct: 1001 ttattcttaggtaaattgattgcgaaatgcttctgtagagtgtccaatatctgttttaca 942

                                                                        
Query: 91   tcttccatacgaaaactgtcaattctcataagatcttcttcagtcttactcaaaaggtcc 150
            |||||  ||||||||   |||||||||||||||||||||| | | || ||||||||||||
Sbjct: 941  tcttctgtacgaaaatattcaattctcataagatcttcttgactgttgctcaaaaggtcc 882

                                                                        
Query: 151  aatagtgtatgtatattggccctttttagacaattatatgttctagaagttaattctaat 210
            |||| |||||||||||||| |||||| ||||||||||| || || |  | || |||||||
Sbjct: 881  aataatgtatgtatattggaccttttgagacaattataggtcctggggggtagttctaat 822

                                                                        
Query: 211  tgatcaataaaaatacaattcaatggaattccnnnnnnnnnnnnctttagattagttaat 270
            || |||||||||||||| ||||||||||||||            ||||||||||||||||
Sbjct: 821  tggtcaataaaaatacatttcaatggaattccttttttgtttttctttagattagttaat 762

                                                                        
Query: 271  cttttttgaaaagtaaaaaggggtggagtaaacctgtttttattttcttcgaaactagtg 330
            || |||||||| |||||||||||| |||||||||||||||||||||| ||||||  | ||
Sbjct: 761  ctattttgaaaggtaaaaaggggtagagtaaacctgtttttattttcctcgaaatgaatg 702

                                                                        
Query: 331  ccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaaattacgagaagcctca 390
             || ||||||| || ||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 701  tccccttcctccgcatgtagaaaaggaataaataaatcaatcaaattacgagaagcttca 642

                                                                        
Query: 391  taaagcgcttccttaggggttaaacttccattagtccatatttctagaaaaagtatctcg 450
            ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| || 
Sbjct: 641  taaagtgcttccttaggagttaaacttccattcgtccatatttctagaaaaagtatttct 582

                                                                        
Query: 451  tgtttttcatttccattcccacaagaaaaaatactataattcacatttcgaacaggcatg 510
            ||||||||||||||||||||| |||||  |||||||| |||| |||||||||||||||||
Sbjct: 581  tgtttttcatttccattcccataagaatgaatactatgattcgcatttcgaacaggcatg 522

                                                  
Query: 511  aatacagcatctataggataacttccatcttgatagtt 548
             ||||||||||||||||||||||||| |||||| ||||
Sbjct: 521  gatacagcatctataggataacttccgtcttgagagtt 484

---

>gb|DQ289179.1| Oryza australiensis RNA polymerase subunit (rpoA) gene, partial
           cds; chloroplast
          Length = 1271

 Score =  498 bits (251), Expect = e-137
 Identities = 317/339 (93%)
 Strand = Plus / Plus

                                                                       
Query: 255 ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
           |||||||||||||||||||||||||||  | |||||||||| ||||||||||||||||||
Sbjct: 548 ctttagattagttaatcttttttgaaagcttaaaaggggtgaagtaaacctgtttttatt 607

                                                                       
Query: 315 ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
           ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 608 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 667

                                                                       
Query: 375 attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 668 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 727

                                                                       
Query: 435 tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
           ||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 728 tagaaaaagtatctcatattttgcatttccattcccacaagaaaaaatactataattcac 787

                                                                       
Query: 495 atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
           |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 788 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 847

                                                  
Query: 555 gagttctgtctgatatccacgatctctcttgatctgtaa 593
           || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 848 gacttccgtgtgatatccgcgatctctcttgatccgtaa 886



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
           |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 294 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 353

                                                                       
Query: 61  ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
           |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 354 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 413

                                                                       
Query: 121 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
           ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 414 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 473

                                                                       
Query: 181 caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
           |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 474 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 533

            
Query: 241 c 241
           |
Sbjct: 534 c 534

---

>gb|DQ289178.1| Oryza punctata RNA polymerase subunit (rpoA) gene, partial cds;
           chloroplast
          Length = 1271

 Score =  498 bits (251), Expect = e-137
 Identities = 317/339 (93%)
 Strand = Plus / Plus

                                                                       
Query: 255 ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
           |||||||||||||||||||||||||||  | |||||||||| ||||||||||||||||||
Sbjct: 548 ctttagattagttaatcttttttgaaagcttaaaaggggtgaagtaaacctgtttttatt 607

                                                                       
Query: 315 ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
           ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 608 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 667

                                                                       
Query: 375 attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 668 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 727

                                                                       
Query: 435 tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
           ||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 728 tagaaaaagtatctcatattttgcatttccattcccacaagaaaaaatactataattcac 787

                                                                       
Query: 495 atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
           |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 788 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 847

                                                  
Query: 555 gagttctgtctgatatccacgatctctcttgatctgtaa 593
           || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 848 gacttccgtgtgatatccgcgatctctcttgatccgtaa 886



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
           |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 294 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 353

                                                                       
Query: 61  ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
           |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 354 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 413

                                                                       
Query: 121 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
           ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 414 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 473

                                                                       
Query: 181 caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
           |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 474 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 533

            
Query: 241 c 241
           |
Sbjct: 534 c 534

---

>gb|DQ289180.1| Oryza granulata RNA polymerase subunit (rpoA) gene, partial cds;
           chloroplast
          Length = 1271

 Score =  490 bits (247), Expect = e-135
 Identities = 316/339 (93%)
 Strand = Plus / Plus

                                                                       
Query: 255 ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
           |||||||||||||||||||||||||||  | |||||||||| ||||||||||||||||||
Sbjct: 548 ctttagattagttaatcttttttgaaagcttaaaaggggtgaagtaaacctgtttttatt 607

                                                                       
Query: 315 ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
           ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 608 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 667

                                                                       
Query: 375 attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
            ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 668 gttacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 727

                                                                       
Query: 435 tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
           ||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 728 tagaaaaagtatctcatattttgcatttccattcccacaagaaaaaatactataattcac 787

                                                                       
Query: 495 atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
           |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 788 atttcgaacaggcatggatacagcatctataggataacttccatcttgagcgttctttct 847

                                                  
Query: 555 gagttctgtctgatatccacgatctctcttgatctgtaa 593
           || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 848 gacttccgtgtgatatccgcgatctctcttgatccgtaa 886



 Score =  321 bits (162), Expect = 1e-84
 Identities = 221/241 (91%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
           |||||| |||||||| |||||||| | |  ||||||||| ||||||| |||||||||| |
Sbjct: 294 aaaaaattgcaatggatttaaaactataacttattcttaggtaaatccattgggagatac 353

                                                                       
Query: 61  ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
           |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||
Sbjct: 354 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcata 413

                                                                       
Query: 121 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
           ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 414 agatcctcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 473

                                                                       
Query: 181 caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
           |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 474 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 533

            
Query: 241 c 241
           |
Sbjct: 534 c 534

---

>gb|DQ289176.1| Oryza officinalis RNA polymerase subunit (rpoA) gene, partial cds;
           chloroplast
          Length = 1271

 Score =  490 bits (247), Expect = e-135
 Identities = 316/339 (93%)
 Strand = Plus / Plus

                                                                       
Query: 255 ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
           |||||||||||||||||||||||||||  | |||||||||| ||||||||||||||||||
Sbjct: 548 ctttagattagttaatcttttttgaaagcttaaaaggggtgaagtaaacctgtttttatt 607

                                                                       
Query: 315 ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
           ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 608 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 667

                                                                       
Query: 375 attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
           ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 668 attacgagaagcctcataaagggcttccttaggggttaaacttccattggtccatatttc 727

                                                                       
Query: 435 tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
           ||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 728 tagaaaaagtatctcatattttgcatttccattcccacaagaaaaaatactataattcac 787

                                                                       
Query: 495 atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
           |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 788 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 847

                                                  
Query: 555 gagttctgtctgatatccacgatctctcttgatctgtaa 593
           || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 848 gacttccgtgtgatatccgcgatctctcttgatccgtaa 886



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
           |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 294 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 353

                                                                       
Query: 61  ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
           |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 354 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 413

                                                                       
Query: 121 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
           ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 414 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 473

                                                                       
Query: 181 caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
           |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 474 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 533

            
Query: 241 c 241
           |
Sbjct: 534 c 534

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  490 bits (247), Expect = e-135
 Identities = 316/339 (93%)
 Strand = Plus / Plus

                                                                           
Query: 255     ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
               |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 5653964 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 5654023

                                                                           
Query: 315     ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
               ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 5654024 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 5654083

                                                                           
Query: 375     attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
               |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 5654084 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 5654143

                                                                           
Query: 435     tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
               ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||| 
Sbjct: 5654144 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcat 5654203

                                                                           
Query: 495     atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
               |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 5654204 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 5654263

                                                      
Query: 555     gagttctgtctgatatccacgatctctcttgatctgtaa 593
               || ||| || |||||||||||||||||||||||||||||
Sbjct: 5654264 gacttccgtgtgatatccacgatctctcttgatctgtaa 5654302



 Score =  321 bits (162), Expect = 1e-84
 Identities = 221/241 (91%)
 Strand = Plus / Plus

                                                                           
Query: 1       aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
               |||||| |||||||| | |||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 5653710 aaaaaattgcaatggatgtaaaactagaacttattcttaggtaaatccattgggagatgc 5653769

                                                                           
Query: 61      ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
               |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 5653770 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 5653829

                                                                           
Query: 121     agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
               ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5653830 agatcttcttccgtcttactcaaaaggtccaatagtgtatgtatattggcccttttgaga 5653889

                                                                           
Query: 181     caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
               |||||||| ||||||||||  | ||||||||||| ||||||||||||||||||| |||||
Sbjct: 5653890 caattatacgttctagaaggcagttctaattgattaataaaaatacaattcaatagaatt 5653949

                
Query: 241     c 241
               |
Sbjct: 5653950 c 5653950



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                     
Query: 32      tattcttaagtaaatcaattgggagatgcttctctagagtgtcccatatatgtt 85
               |||||||| ||||||  |||||||||||||||||||||||||||||||| ||||
Sbjct: 3115532 tattcttaggtaaattcattgggagatgcttctctagagtgtcccatatctgtt 3115479

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  490 bits (247), Expect = e-135
 Identities = 316/339 (93%)
 Strand = Plus / Plus

                                                                           
Query: 255     ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
               |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 5653957 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 5654016

                                                                           
Query: 315     ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
               ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 5654017 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 5654076

                                                                           
Query: 375     attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
               |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 5654077 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 5654136

                                                                           
Query: 435     tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
               ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||| 
Sbjct: 5654137 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcat 5654196

                                                                           
Query: 495     atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
               |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 5654197 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 5654256

                                                      
Query: 555     gagttctgtctgatatccacgatctctcttgatctgtaa 593
               || ||| || |||||||||||||||||||||||||||||
Sbjct: 5654257 gacttccgtgtgatatccacgatctctcttgatctgtaa 5654295



 Score =  321 bits (162), Expect = 1e-84
 Identities = 221/241 (91%)
 Strand = Plus / Plus

                                                                           
Query: 1       aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
               |||||| |||||||| | |||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 5653703 aaaaaattgcaatggatgtaaaactagaacttattcttaggtaaatccattgggagatgc 5653762

                                                                           
Query: 61      ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
               |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 5653763 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 5653822

                                                                           
Query: 121     agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
               ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5653823 agatcttcttccgtcttactcaaaaggtccaatagtgtatgtatattggcccttttgaga 5653882

                                                                           
Query: 181     caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
               |||||||| ||||||||||  | ||||||||||| ||||||||||||||||||| |||||
Sbjct: 5653883 caattatacgttctagaaggcagttctaattgattaataaaaatacaattcaatagaatt 5653942

                
Query: 241     c 241
               |
Sbjct: 5653943 c 5653943



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                     
Query: 32      tattcttaagtaaatcaattgggagatgcttctctagagtgtcccatatatgtt 85
               |||||||| ||||||  |||||||||||||||||||||||||||||||| ||||
Sbjct: 3115477 tattcttaggtaaattcattgggagatgcttctctagagtgtcccatatctgtt 3115424

---

>emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb0071I17 of library OSJNBb
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 159056

 Score =  490 bits (247), Expect = e-135
 Identities = 316/339 (93%)
 Strand = Plus / Plus

                                                                        
Query: 255  ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
            |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 8487 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 8546

                                                                        
Query: 315  ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
            ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 8547 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 8606

                                                                        
Query: 375  attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 8607 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 8666

                                                                        
Query: 435  tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
            ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||| 
Sbjct: 8667 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcat 8726

                                                                        
Query: 495  atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
            |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 8727 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 8786

                                                   
Query: 555  gagttctgtctgatatccacgatctctcttgatctgtaa 593
            || ||| || |||||||||||||||||||||||||||||
Sbjct: 8787 gacttccgtgtgatatccacgatctctcttgatctgtaa 8825



 Score =  321 bits (162), Expect = 1e-84
 Identities = 221/241 (91%)
 Strand = Plus / Plus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| | |||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 8233 aaaaaattgcaatggatgtaaaactagaacttattcttaggtaaatccattgggagatgc 8292

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 8293 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 8352

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 8353 agatcttcttccgtcttactcaaaaggtccaatagtgtatgtatattggcccttttgaga 8412

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||  | ||||||||||| ||||||||||||||||||| |||||
Sbjct: 8413 caattatacgttctagaaggcagttctaattgattaataaaaatacaattcaatagaatt 8472

             
Query: 241  c 241
            |
Sbjct: 8473 c 8473

---

>dbj|AK066307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060A03, full
            insert sequence
          Length = 2412

 Score =  484 bits (244), Expect = e-133
 Identities = 317/340 (93%), Gaps = 1/340 (0%)
 Strand = Plus / Minus

                                                                        
Query: 255  ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
            |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 2135 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 2076

                                                                        
Query: 315  ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
            ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 2075 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 2016

                                                                        
Query: 375  attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2015 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 1956

                                                                        
Query: 435  tagaaaaagtatctcgtgtttttcatttccattcccacaag-aaaaaatactataattca 493
            ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 1955 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaaatactataattca 1896

                                                                        
Query: 494  catttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttc 553
            ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 1895 catttcgaacaggcatgaatacagcatctataggataacttccatcttgagtgttctttc 1836

                                                    
Query: 554  tgagttctgtctgatatccacgatctctcttgatctgtaa 593
            ||| ||| || |||||||| ||||||||||||||| ||||
Sbjct: 1835 tgacttccgtgtgatatccgcgatctctcttgatccgtaa 1796



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 2389 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 2330

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 2329 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 2270

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 2269 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 2210

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 2209 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 2150

             
Query: 241  c 241
            |
Sbjct: 2149 c 2149

---

>ref|XM_481020.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2408

 Score =  482 bits (243), Expect = e-133
 Identities = 315/339 (92%)
 Strand = Plus / Minus

                                                                        
Query: 255  ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
            |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 2131 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 2072

                                                                        
Query: 315  ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
            ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 2071 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 2012

                                                                        
Query: 375  attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2011 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 1952

                                                                        
Query: 435  tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
            ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 1951 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 1892

                                                                        
Query: 495  atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
            |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 1891 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 1832

                                                   
Query: 555  gagttctgtctgatatccacgatctctcttgatctgtaa 593
            || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 1831 gacttccgtgtgatatccgcgatctctcttgatccgtaa 1793



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 2385 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 2326

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 2325 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 2266

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 2265 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 2206

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 2205 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 2146

             
Query: 241  c 241
            |
Sbjct: 2145 c 2145

---

>ref|XM_475049.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1341

 Score =  482 bits (243), Expect = e-133
 Identities = 315/339 (92%)
 Strand = Plus / Minus

                                                                        
Query: 255  ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
            |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 1110 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 1051

                                                                        
Query: 315  ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
            ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 1050 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 991

                                                                        
Query: 375  attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 990  attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 931

                                                                        
Query: 435  tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
            ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 930  tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 871

                                                                        
Query: 495  atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
            |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 870  atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 811

                                                   
Query: 555  gagttctgtctgatatccacgatctctcttgatctgtaa 593
            || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 810  gacttccgtgtgatatccgcgatctctcttgatccgtaa 772



 Score =  315 bits (159), Expect = 9e-83
 Identities = 198/211 (93%)
 Strand = Plus / Minus

                                                                        
Query: 31   ttattcttaagtaaatcaattgggagatgcttctctagagtgtcccatatatgttttcta 90
            ||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 1334 ttattcttaggtaaatccattgggagatgcttctctagagtgtcccatatctgttttcca 1275

                                                                        
Query: 91   tcttccatacgaaaactgtcaattctcataagatcttcttcagtcttactcaaaaggtcc 150
            |||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 1274 tcttgcatacgaaaactgtcaattctcatcagatcttcttccgtcttactcaaaaggtcc 1215

                                                                        
Query: 151  aatagtgtatgtatattggccctttttagacaattatatgttctagaagttaattctaat 210
            ||||||||||| |||||||||||||| ||||||||||| ||||||||||  | |||||||
Sbjct: 1214 aatagtgtatggatattggcccttttgagacaattatacgttctagaaggcagttctaat 1155

                                           
Query: 211  tgatcaataaaaatacaattcaatggaattc 241
            |||||||||||||||||||||||||||||||
Sbjct: 1154 tgatcaataaaaatacaattcaatggaattc 1124

---

>ref|NM_190858.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1014

 Score =  482 bits (243), Expect = e-133
 Identities = 315/339 (92%)
 Strand = Plus / Minus

                                                                       
Query: 255 ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
           |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 783 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 724

                                                                       
Query: 315 ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
           ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 723 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 664

                                                                       
Query: 375 attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 663 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 604

                                                                       
Query: 435 tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
           ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 603 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 544

                                                                       
Query: 495 atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
           |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 543 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 484

                                                  
Query: 555 gagttctgtctgatatccacgatctctcttgatctgtaa 593
           || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 483 gacttccgtgtgatatccgcgatctctcttgatccgtaa 445



 Score =  307 bits (155), Expect = 2e-80
 Identities = 197/211 (93%)
 Strand = Plus / Minus

                                                                        
Query: 31   ttattcttaagtaaatcaattgggagatgcttctctagagtgtcccatatatgttttcta 90
            ||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 1007 ttattcttaggtaaatccattgggagatgcttctctagagtgtcccatatctgttttcca 948

                                                                        
Query: 91   tcttccatacgaaaactgtcaattctcataagatcttcttcagtcttactcaaaaggtcc 150
            |||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 947  tcttgcatacgaaaactgtcaattctcatcagatcttcttccgtcttactcaaaaggtcc 888

                                                                        
Query: 151  aatagtgtatgtatattggccctttttagacaattatatgttctagaagttaattctaat 210
            ||||||||||| |||||||||||||| ||||||||||| ||||||||||  | |||||||
Sbjct: 887  aatagtgtatggatattggcccttttgagacaattatacgttctagaaggcagttctaat 828

                                           
Query: 211  tgatcaataaaaatacaattcaatggaattc 241
            |||||||||||||||||| ||||||||||||
Sbjct: 827  tgatcaataaaaatacaactcaatggaattc 797

---

>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
             complete genome
          Length = 134551

 Score =  482 bits (243), Expect = e-133
 Identities = 315/339 (92%)
 Strand = Plus / Plus

                                                                         
Query: 255   ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
             |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 74573 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 74632

                                                                         
Query: 315   ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
             ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 74633 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 74692

                                                                         
Query: 375   attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
             |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 74693 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 74752

                                                                         
Query: 435   tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
             ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 74753 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 74812

                                                                         
Query: 495   atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
             |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 74813 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 74872

                                                    
Query: 555   gagttctgtctgatatccacgatctctcttgatctgtaa 593
             || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 74873 gacttccgtgtgatatccgcgatctctcttgatccgtaa 74911



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Plus

                                                                         
Query: 1     aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
             |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 74319 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 74378

                                                                         
Query: 61    ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
             |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 74379 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 74438

                                                                         
Query: 121   agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
             ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 74439 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 74498

                                                                         
Query: 181   caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
             |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 74499 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 74558

              
Query: 241   c 241
             |
Sbjct: 74559 c 74559

---

>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
             complete genome
          Length = 134551

 Score =  482 bits (243), Expect = e-133
 Identities = 315/339 (92%)
 Strand = Plus / Plus

                                                                         
Query: 255   ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
             |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 74573 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 74632

                                                                         
Query: 315   ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
             ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 74633 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 74692

                                                                         
Query: 375   attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
             |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 74693 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 74752

                                                                         
Query: 435   tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
             ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 74753 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 74812

                                                                         
Query: 495   atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
             |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 74813 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 74872

                                                    
Query: 555   gagttctgtctgatatccacgatctctcttgatctgtaa 593
             || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 74873 gacttccgtgtgatatccgcgatctctcttgatccgtaa 74911



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Plus

                                                                         
Query: 1     aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
             |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 74319 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 74378

                                                                         
Query: 61    ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
             |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 74379 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 74438

                                                                         
Query: 121   agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
             ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 74439 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 74498

                                                                         
Query: 181   caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
             |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 74499 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 74558

              
Query: 241   c 241
             |
Sbjct: 74559 c 74559

---

>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast,
             complete genome
          Length = 134496

 Score =  482 bits (243), Expect = e-133
 Identities = 315/339 (92%)
 Strand = Plus / Plus

                                                                         
Query: 255   ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
             |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 74517 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 74576

                                                                         
Query: 315   ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
             ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 74577 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 74636

                                                                         
Query: 375   attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
             |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 74637 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 74696

                                                                         
Query: 435   tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
             ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 74697 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 74756

                                                                         
Query: 495   atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
             |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 74757 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 74816

                                                    
Query: 555   gagttctgtctgatatccacgatctctcttgatctgtaa 593
             || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 74817 gacttccgtgtgatatccgcgatctctcttgatccgtaa 74855



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Plus

                                                                         
Query: 1     aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
             |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 74263 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 74322

                                                                         
Query: 61    ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
             |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 74323 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 74382

                                                                         
Query: 121   agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
             ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 74383 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 74442

                                                                         
Query: 181   caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
             |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 74443 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 74502

              
Query: 241   c 241
             |
Sbjct: 74503 c 74503

---

>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score =  482 bits (243), Expect = e-133
 Identities = 315/339 (92%)
 Strand = Plus / Plus

                                                                         
Query: 255   ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
             |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 74561 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 74620

                                                                         
Query: 315   ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
             ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 74621 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 74680

                                                                         
Query: 375   attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
             |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 74681 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 74740

                                                                         
Query: 435   tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
             ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 74741 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 74800

                                                                         
Query: 495   atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
             |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 74801 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 74860

                                                    
Query: 555   gagttctgtctgatatccacgatctctcttgatctgtaa 593
             || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 74861 gacttccgtgtgatatccgcgatctctcttgatccgtaa 74899



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Plus

                                                                         
Query: 1     aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
             |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 74307 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 74366

                                                                         
Query: 61    ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
             |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 74367 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 74426

                                                                         
Query: 121   agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
             ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 74427 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 74486

                                                                         
Query: 181   caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
             |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 74487 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 74546

              
Query: 241   c 241
             |
Sbjct: 74547 c 74547

---

>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08,
             complete sequence
          Length = 145980

 Score =  482 bits (243), Expect = e-133
 Identities = 315/339 (92%)
 Strand = Plus / Minus

                                                                         
Query: 255   ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
             |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 76210 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 76151

                                                                         
Query: 315   ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
             ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 76150 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 76091

                                                                         
Query: 375   attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
             |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 76090 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 76031

                                                                         
Query: 435   tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
             ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 76030 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 75971

                                                                         
Query: 495   atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
             |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 75970 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 75911

                                                    
Query: 555   gagttctgtctgatatccacgatctctcttgatctgtaa 593
             || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 75910 gacttccgtgtgatatccgcgatctctcttgatccgtaa 75872



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Minus

                                                                         
Query: 1     aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
             |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 76464 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 76405

                                                                         
Query: 61    ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
             |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 76404 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 76345

                                                                         
Query: 121   agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
             ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 76344 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 76285

                                                                         
Query: 181   caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
             |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 76284 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 76225

              
Query: 241   c 241
             |
Sbjct: 76224 c 76224

---

>gb|DQ289177.1| Oryza rhizomatis RNA polymerase subunit (rpoA) gene, partial cds;
           chloroplast
          Length = 1271

 Score =  482 bits (243), Expect = e-133
 Identities = 315/339 (92%)
 Strand = Plus / Plus

                                                                       
Query: 255 ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
           |||||||||||||||||||||||||||  | |||||||||| |||||||||||||| |||
Sbjct: 548 ctttagattagttaatcttttttgaaagcttaaaaggggtgaagtaaacctgttttgatt 607

                                                                       
Query: 315 ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
           ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 608 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 667

                                                                       
Query: 375 attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
           ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 668 attacgagaagcctcataaagggcttccttaggggttaaacttccattggtccatatttc 727

                                                                       
Query: 435 tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
           ||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 728 tagaaaaagtatctcatattttgcatttccattcccacaagaaaaaatactataattcac 787

                                                                       
Query: 495 atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
           |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 788 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 847

                                                  
Query: 555 gagttctgtctgatatccacgatctctcttgatctgtaa 593
           || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 848 gacttccgtgtgatatccgcgatctctcttgatccgtaa 886



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
           |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 294 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 353

                                                                       
Query: 61  ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
           |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 354 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 413

                                                                       
Query: 121 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
           ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 414 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 473

                                                                       
Query: 181 caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
           |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 474 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 533

            
Query: 241 c 241
           |
Sbjct: 534 c 534

---

>gb|DQ289175.1| Oryza sp. IRGC 81916 RNA polymerase subunit (rpoA) gene, partial
           cds; chloroplast
          Length = 1264

 Score =  482 bits (243), Expect = e-133
 Identities = 315/339 (92%)
 Strand = Plus / Plus

                                                                       
Query: 255 ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
           |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 541 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 600

                                                                       
Query: 315 ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
           ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 601 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 660

                                                                       
Query: 375 attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 661 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 720

                                                                       
Query: 435 tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
           ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 721 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 780

                                                                       
Query: 495 atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
           |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 781 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 840

                                                  
Query: 555 gagttctgtctgatatccacgatctctcttgatctgtaa 593
           || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 841 gacttccgtgtgatatccgcgatctctcttgatccgtaa 879



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
           |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 287 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 346

                                                                       
Query: 61  ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
           |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 347 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 406

                                                                       
Query: 121 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
           ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 407 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 466

                                                                       
Query: 181 caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
           |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 467 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 526

            
Query: 241 c 241
           |
Sbjct: 527 c 527

---

>gb|DQ289173.1| Oryza nivara RNA polymerase subunit (rpoA) gene, partial cds;
           chloroplast
          Length = 1271

 Score =  482 bits (243), Expect = e-133
 Identities = 315/339 (92%)
 Strand = Plus / Plus

                                                                       
Query: 255 ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
           |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 548 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 607

                                                                       
Query: 315 ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
           ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 608 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 667

                                                                       
Query: 375 attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 668 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 727

                                                                       
Query: 435 tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
           ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 728 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 787

                                                                       
Query: 495 atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
           |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 788 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 847

                                                  
Query: 555 gagttctgtctgatatccacgatctctcttgatctgtaa 593
           || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 848 gacttccgtgtgatatccgcgatctctcttgatccgtaa 886



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
           |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 294 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 353

                                                                       
Query: 61  ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
           |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 354 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 413

                                                                       
Query: 121 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
           ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 414 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 473

                                                                       
Query: 181 caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
           |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 474 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 533

            
Query: 241 c 241
           |
Sbjct: 534 c 534

---

>gb|DQ289172.1| Oryza sativa RNA polymerase subunit (rpoA) gene, partial cds;
           chloroplast
          Length = 1271

 Score =  482 bits (243), Expect = e-133
 Identities = 315/339 (92%)
 Strand = Plus / Plus

                                                                       
Query: 255 ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
           |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 548 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 607

                                                                       
Query: 315 ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
           ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 608 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 667

                                                                       
Query: 375 attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 668 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 727

                                                                       
Query: 435 tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
           ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 728 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 787

                                                                       
Query: 495 atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
           |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 788 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 847

                                                  
Query: 555 gagttctgtctgatatccacgatctctcttgatctgtaa 593
           || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 848 gacttccgtgtgatatccgcgatctctcttgatccgtaa 886



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
           |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 294 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 353

                                                                       
Query: 61  ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
           |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 354 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 413

                                                                       
Query: 121 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
           ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 414 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 473

                                                                       
Query: 181 caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
           |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 474 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 533

            
Query: 241 c 241
           |
Sbjct: 534 c 534

---

>gb|DQ289171.1| Oryza sativa RNA polymerase subunit (rpoA) gene, partial cds;
           chloroplast
          Length = 1271

 Score =  482 bits (243), Expect = e-133
 Identities = 315/339 (92%)
 Strand = Plus / Plus

                                                                       
Query: 255 ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
           |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 548 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 607

                                                                       
Query: 315 ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
           ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 608 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 667

                                                                       
Query: 375 attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 668 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 727

                                                                       
Query: 435 tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
           ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 728 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 787

                                                                       
Query: 495 atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
           |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 788 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 847

                                                  
Query: 555 gagttctgtctgatatccacgatctctcttgatctgtaa 593
           || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 848 gacttccgtgtgatatccgcgatctctcttgatccgtaa 886



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
           |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 294 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 353

                                                                       
Query: 61  ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
           |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 354 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 413

                                                                       
Query: 121 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
           ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 414 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 473

                                                                       
Query: 181 caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
           |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 474 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 533

            
Query: 241 c 241
           |
Sbjct: 534 c 534

---

>gb|DQ289170.1| Oryza sativa RNA polymerase subunit (rpoA) gene, partial cds;
           chloroplast
          Length = 1271

 Score =  482 bits (243), Expect = e-133
 Identities = 315/339 (92%)
 Strand = Plus / Plus

                                                                       
Query: 255 ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
           |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 548 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 607

                                                                       
Query: 315 ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
           ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 608 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 667

                                                                       
Query: 375 attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 668 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 727

                                                                       
Query: 435 tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
           ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 728 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 787

                                                                       
Query: 495 atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
           |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 788 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 847

                                                  
Query: 555 gagttctgtctgatatccacgatctctcttgatctgtaa 593
           || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 848 gacttccgtgtgatatccgcgatctctcttgatccgtaa 886



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
           |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 294 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 353

                                                                       
Query: 61  ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
           |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 354 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 413

                                                                       
Query: 121 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
           ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 414 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 473

                                                                       
Query: 181 caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
           |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 474 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 533

            
Query: 241 c 241
           |
Sbjct: 534 c 534

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  482 bits (243), Expect = e-133
 Identities = 315/339 (92%)
 Strand = Plus / Minus

                                                                           
Query: 255     ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
               |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 9195137 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 9195078

                                                                           
Query: 315     ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
               ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 9195077 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 9195018

                                                                           
Query: 375     attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
               |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 9195017 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 9194958

                                                                           
Query: 435     tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
               ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 9194957 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 9194898

                                                                           
Query: 495     atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
               |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 9194897 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 9194838

                                                      
Query: 555     gagttctgtctgatatccacgatctctcttgatctgtaa 593
               || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 9194837 gacttccgtgtgatatccgcgatctctcttgatccgtaa 9194799



 Score =  482 bits (243), Expect = e-133
 Identities = 315/339 (92%)
 Strand = Plus / Minus

                                                                           
Query: 255     ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
               |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 9118184 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 9118125

                                                                           
Query: 315     ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
               ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 9118124 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 9118065

                                                                           
Query: 375     attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
               |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 9118064 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 9118005

                                                                           
Query: 435     tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
               ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 9118004 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 9117945

                                                                           
Query: 495     atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
               |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 9117944 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 9117885

                                                      
Query: 555     gagttctgtctgatatccacgatctctcttgatctgtaa 593
               || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 9117884 gacttccgtgtgatatccgcgatctctcttgatccgtaa 9117846



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Minus

                                                                           
Query: 1       aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
               |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 9195391 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 9195332

                                                                           
Query: 61      ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
               |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 9195331 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 9195272

                                                                           
Query: 121     agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
               ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 9195271 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 9195212

                                                                           
Query: 181     caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
               |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 9195211 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 9195152

                
Query: 241     c 241
               |
Sbjct: 9195151 c 9195151



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Minus

                                                                           
Query: 1       aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
               |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 9118438 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 9118379

                                                                           
Query: 61      ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
               |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 9118378 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 9118319

                                                                           
Query: 121     agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
               ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 9118318 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 9118259

                                                                           
Query: 181     caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
               |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 9118258 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 9118199

                
Query: 241     c 241
               |
Sbjct: 9118198 c 9118198

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  482 bits (243), Expect = e-133
 Identities = 315/339 (92%)
 Strand = Plus / Minus

                                                                           
Query: 255     ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
               |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 9262484 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 9262425

                                                                           
Query: 315     ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
               ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 9262424 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 9262365

                                                                           
Query: 375     attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
               |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 9262364 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 9262305

                                                                           
Query: 435     tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
               ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 9262304 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 9262245

                                                                           
Query: 495     atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
               |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 9262244 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 9262185

                                                      
Query: 555     gagttctgtctgatatccacgatctctcttgatctgtaa 593
               || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 9262184 gacttccgtgtgatatccgcgatctctcttgatccgtaa 9262146



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Minus

                                                                           
Query: 1       aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
               |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 9262738 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 9262679

                                                                           
Query: 61      ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
               |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 9262678 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 9262619

                                                                           
Query: 121     agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
               ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 9262618 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 9262559

                                                                           
Query: 181     caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
               |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 9262558 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 9262499

                
Query: 241     c 241
               |
Sbjct: 9262498 c 9262498



 Score =  264 bits (133), Expect = 3e-67
 Identities = 220/249 (88%), Gaps = 9/249 (3%)
 Strand = Plus / Plus

                                                                         
Query: 1     aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
             |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 71039 aaaaaattgcaatggatttaaaactagaacttattcttacgtaaatccattgggagatgc 71098

                                                                         
Query: 61    ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaatt------ 114
             |||||||||||||||||||||||||||| ||||| |||||||||||||||||||      
Sbjct: 71099 ttctctagagtgtcccatatatgttttccatcttgcatacgaaaactgtcaatttgtcaa 71158

                                                                         
Query: 115   --ctcataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccc 172
               ||||| ||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||
Sbjct: 71159 ttctcatcagatcttcttccgtcttactcaaaaggtcaaatagtgtatgaatattagccc 71218

                                                                         
Query: 173   tttttagacaattatatgttctagaagttaattctaattgatcaataaaaatacaattca 232
             |||| ||||||||||| ||||||||||  | |||||||||||| |||||||||||| |||
Sbjct: 71219 ttttgagacaattatacgttctagaaggcagttctaattgatcgataaaaatacaa-tca 71277

                      
Query: 233   atggaattc 241
             |||||||||
Sbjct: 71278 atggaattc 71286



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 84/98 (85%), Gaps = 1/98 (1%)
 Strand = Plus / Minus

                                                                            
Query: 31       ttattcttaagtaaatcaattgggagatgcttctctagagtgtcccatatatgttttcta 90
                ||||||||| ||||||  ||||||| ||||||||||||| ||| |||||| ||||||| |
Sbjct: 26378751 ttattcttaggtaaattcattgggacatgcttctctaga-tgttccatatctgttttcca 26378693

                                                      
Query: 91       tcttccatacgaaaactgtcaattctcataagatcttc 128
                ||||  ||| |||||||||| ||||| || ||||||||
Sbjct: 26378692 tcttgtatatgaaaactgtcgattcttattagatcttc 26378655



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/71 (88%), Gaps = 2/71 (2%)
 Strand = Plus / Plus

                                                                         
Query: 255   ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
             ||||||||||||||||||||||| |||  | ||||||||   ||||||||||||||||||
Sbjct: 71300 ctttagattagttaatcttttttaaaagcttaaaagggga--agtaaacctgtttttatt 71357

                        
Query: 315   ttcttcgaaac 325
             ||||| |||||
Sbjct: 71358 ttcttggaaac 71368

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  482 bits (243), Expect = e-133
 Identities = 315/339 (92%)
 Strand = Plus / Plus

                                                                            
Query: 255      ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
                |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 33494342 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 33494401

                                                                            
Query: 315      ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
                ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 33494402 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 33494461

                                                                            
Query: 375      attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
                |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 33494462 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 33494521

                                                                            
Query: 435      tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
                ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 33494522 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 33494581

                                                                            
Query: 495      atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
                |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 33494582 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 33494641

                                                       
Query: 555      gagttctgtctgatatccacgatctctcttgatctgtaa 593
                || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 33494642 gacttccgtgtgatatccgcgatctctcttgatccgtaa 33494680



 Score =  329 bits (166), Expect = 6e-87
 Identities = 222/241 (92%)
 Strand = Plus / Plus

                                                                            
Query: 1        aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
                |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 33494088 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 33494147

                                                                            
Query: 61       ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
                |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 33494148 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 33494207

                                                                            
Query: 121      agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
                ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 33494208 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 33494267

                                                                            
Query: 181      caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
                |||||||| ||||||||||  | ||||||||||||||||||||||||| |||||||||||
Sbjct: 33494268 caattatacgttctagaaggcagttctaattgatcaataaaaatacaactcaatggaatt 33494327

                 
Query: 241      c 241
                |
Sbjct: 33494328 c 33494328

---

>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0557A01
          Length = 147201

 Score =  482 bits (243), Expect = e-133
 Identities = 315/339 (92%)
 Strand = Plus / Plus

                                                                         
Query: 255   ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
             |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 39539 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 39598

                                                                         
Query: 315   ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
             ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 39599 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 39658

                                                                         
Query: 375   attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
             |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 39659 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 39718

                                                                         
Query: 435   tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
             ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 39719 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 39778

                                                                         
Query: 495   atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
             |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 39779 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 39838

                                                    
Query: 555   gagttctgtctgatatccacgatctctcttgatctgtaa 593
             || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 39839 gacttccgtgtgatatccgcgatctctcttgatccgtaa 39877



 Score =  329 bits (166), Expect = 6e-87
 Identities = 222/241 (92%)
 Strand = Plus / Plus

                                                                         
Query: 1     aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
             |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 39285 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 39344

                                                                         
Query: 61    ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
             |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 39345 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 39404

                                                                         
Query: 121   agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
             ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 39405 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 39464

                                                                         
Query: 181   caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
             |||||||| ||||||||||  | ||||||||||||||||||||||||| |||||||||||
Sbjct: 39465 caattatacgttctagaaggcagttctaattgatcaataaaaatacaactcaatggaatt 39524

              
Query: 241   c 241
             |
Sbjct: 39525 c 39525

---

>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0036E18
          Length = 141148

 Score =  482 bits (243), Expect = e-133
 Identities = 315/339 (92%)
 Strand = Plus / Minus

                                                                         
Query: 255   ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
             |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 73697 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 73638

                                                                         
Query: 315   ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
             ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 73637 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 73578

                                                                         
Query: 375   attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
             |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 73577 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 73518

                                                                         
Query: 435   tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
             ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 73517 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 73458

                                                                         
Query: 495   atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
             |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 73457 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 73398

                                                    
Query: 555   gagttctgtctgatatccacgatctctcttgatctgtaa 593
             || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 73397 gacttccgtgtgatatccgcgatctctcttgatccgtaa 73359



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Minus

                                                                         
Query: 1     aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
             |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 73951 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 73892

                                                                         
Query: 61    ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
             |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 73891 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 73832

                                                                         
Query: 121   agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
             ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 73831 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 73772

                                                                         
Query: 181   caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
             |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 73771 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 73712

              
Query: 241   c 241
             |
Sbjct: 73711 c 73711

---

>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score =  482 bits (243), Expect = e-133
 Identities = 315/339 (92%)
 Strand = Plus / Plus

                                                                         
Query: 255   ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
             |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 74497 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 74556

                                                                         
Query: 315   ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
             ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 74557 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 74616

                                                                         
Query: 375   attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
             |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 74617 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 74676

                                                                         
Query: 435   tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
             ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 74677 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 74736

                                                                         
Query: 495   atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
             |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 74737 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 74796

                                                    
Query: 555   gagttctgtctgatatccacgatctctcttgatctgtaa 593
             || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 74797 gacttccgtgtgatatccgcgatctctcttgatccgtaa 74835



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Plus

                                                                         
Query: 1     aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
             |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 74243 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 74302

                                                                         
Query: 61    ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
             |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 74303 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 74362

                                                                         
Query: 121   agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
             ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 74363 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 74422

                                                                         
Query: 181   caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
             |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 74423 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 74482

              
Query: 241   c 241
             |
Sbjct: 74483 c 74483

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  480 bits (242), Expect = e-132
 Identities = 311/334 (93%)
 Strand = Plus / Minus

                                                                            
Query: 255      ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
                |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 23184523 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 23184464

                                                                            
Query: 315      ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
                ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 23184463 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 23184404

                                                                            
Query: 375      attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
                |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 23184403 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 23184344

                                                                            
Query: 435      tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
                ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 23184343 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 23184284

                                                                            
Query: 495      atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
                |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 23184283 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 23184224

                                                  
Query: 555      gagttctgtctgatatccacgatctctcttgatc 588
                || ||| || |||||||| |||||||||||||||
Sbjct: 23184223 gacttccgtgtgatatccgcgatctctcttgatc 23184190



 Score =  329 bits (166), Expect = 6e-87
 Identities = 222/241 (92%)
 Strand = Plus / Minus

                                                                            
Query: 1        aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
                |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 23184777 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 23184718

                                                                            
Query: 61       ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
                |||||||||||||||||||| ||||||| ||||| ||||| |||||||||||||||||| 
Sbjct: 23184717 ttctctagagtgtcccatatctgttttccatcttgcatacaaaaactgtcaattctcatc 23184658

                                                                            
Query: 121      agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
                ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 23184657 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 23184598

                                                                            
Query: 181      caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
                |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 23184597 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 23184538

                 
Query: 241      c 241
                |
Sbjct: 23184537 c 23184537

---

>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0417D05
          Length = 165752

 Score =  480 bits (242), Expect = e-132
 Identities = 311/334 (93%)
 Strand = Plus / Minus

                                                                          
Query: 255    ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
              |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 135171 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 135112

                                                                          
Query: 315    ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
              ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 135111 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 135052

                                                                          
Query: 375    attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
              |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 135051 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 134992

                                                                          
Query: 435    tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
              ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 134991 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 134932

                                                                          
Query: 495    atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
              |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 134931 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 134872

                                                
Query: 555    gagttctgtctgatatccacgatctctcttgatc 588
              || ||| || |||||||| |||||||||||||||
Sbjct: 134871 gacttccgtgtgatatccgcgatctctcttgatc 134838



 Score =  329 bits (166), Expect = 6e-87
 Identities = 222/241 (92%)
 Strand = Plus / Minus

                                                                          
Query: 1      aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
              |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 135425 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 135366

                                                                          
Query: 61     ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
              |||||||||||||||||||| ||||||| ||||| ||||| |||||||||||||||||| 
Sbjct: 135365 ttctctagagtgtcccatatctgttttccatcttgcatacaaaaactgtcaattctcatc 135306

                                                                          
Query: 121    agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
              ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 135305 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 135246

                                                                          
Query: 181    caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
              |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 135245 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 135186

               
Query: 241    c 241
              |
Sbjct: 135185 c 135185

---

>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0642B07
          Length = 139297

 Score =  480 bits (242), Expect = e-132
 Identities = 311/334 (93%)
 Strand = Plus / Minus

                                                                         
Query: 255   ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
             |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 19285 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 19226

                                                                         
Query: 315   ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
             ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 19225 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 19166

                                                                         
Query: 375   attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
             |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 19165 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 19106

                                                                         
Query: 435   tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
             ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 19105 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 19046

                                                                         
Query: 495   atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
             |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 19045 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 18986

                                               
Query: 555   gagttctgtctgatatccacgatctctcttgatc 588
             || ||| || |||||||| |||||||||||||||
Sbjct: 18985 gacttccgtgtgatatccgcgatctctcttgatc 18952



 Score =  329 bits (166), Expect = 6e-87
 Identities = 222/241 (92%)
 Strand = Plus / Minus

                                                                         
Query: 1     aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
             |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 19539 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 19480

                                                                         
Query: 61    ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
             |||||||||||||||||||| ||||||| ||||| ||||| |||||||||||||||||| 
Sbjct: 19479 ttctctagagtgtcccatatctgttttccatcttgcatacaaaaactgtcaattctcatc 19420

                                                                         
Query: 121   agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
             ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 19419 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 19360

                                                                         
Query: 181   caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
             |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 19359 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 19300

              
Query: 241   c 241
             |
Sbjct: 19299 c 19299

---

>gb|DQ289174.1| Oryza glumipatula RNA polymerase subunit (rpoA) gene, partial cds;
           chloroplast
          Length = 1271

 Score =  474 bits (239), Expect = e-130
 Identities = 314/339 (92%)
 Strand = Plus / Plus

                                                                       
Query: 255 ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
           |||||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||
Sbjct: 548 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaacctgtttttatt 607

                                                                       
Query: 315 ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
           ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 608 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 667

                                                                       
Query: 375 attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
           |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 668 attacgagaagcctcataaagcgcttccataggggttaaacttccattggtccatatttc 727

                                                                       
Query: 435 tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
           ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 728 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 787

                                                                       
Query: 495 atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
           |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 788 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 847

                                                  
Query: 555 gagttctgtctgatatccacgatctctcttgatctgtaa 593
           || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 848 gacttccgtgtgatatccgcgatctctcttgatccgtaa 886



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
           |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 294 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 353

                                                                       
Query: 61  ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
           |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 354 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 413

                                                                       
Query: 121 agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
           ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 414 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 473

                                                                       
Query: 181 caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
           |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 474 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 533

            
Query: 241 c 241
           |
Sbjct: 534 c 534

---

>ref|NM_195997.1| Oryza sativa (japonica cultivar-group) putative RNA polymerase alpha
            subunit (OSJNAb0075K12.31), mRNA
          Length = 1341

 Score =  466 bits (235), Expect = e-128
 Identities = 313/339 (92%)
 Strand = Plus / Minus

                                                                        
Query: 255  ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
            |||||||||||||||||||||||||||  | |||||||| | |||||| |||||||||||
Sbjct: 1110 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaatctgtttttatt 1051

                                                                        
Query: 315  ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
            ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 1050 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 991

                                                                        
Query: 375  attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 990  attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 931

                                                                        
Query: 435  tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
            ||||||||||||||| | | || |||||||||||||||||| ||||||||||||||||||
Sbjct: 930  tagaaaaagtatctcatatcttgcatttccattcccacaagcaaaaatactataattcac 871

                                                                        
Query: 495  atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
            |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 870  atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 811

                                                   
Query: 555  gagttctgtctgatatccacgatctctcttgatctgtaa 593
            || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 810  gacttccgtgtgatatccgcgatctctcttgatccgtaa 772



 Score =  315 bits (159), Expect = 9e-83
 Identities = 198/211 (93%)
 Strand = Plus / Minus

                                                                        
Query: 31   ttattcttaagtaaatcaattgggagatgcttctctagagtgtcccatatatgttttcta 90
            ||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 1334 ttattcttaggtaaatccattgggagatgcttctctagagtgtcccatatctgttttcca 1275

                                                                        
Query: 91   tcttccatacgaaaactgtcaattctcataagatcttcttcagtcttactcaaaaggtcc 150
            |||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 1274 tcttgcatacgaaaactgtcaattctcatcagatcttcttccgtcttactcaaaaggtcc 1215

                                                                        
Query: 151  aatagtgtatgtatattggccctttttagacaattatatgttctagaagttaattctaat 210
            ||||||||||| |||||||||||||| ||||||||||| ||||||||||  | |||||||
Sbjct: 1214 aatagtgtatggatattggcccttttgagacaattatacgttctagaaggcagttctaat 1155

                                           
Query: 211  tgatcaataaaaatacaattcaatggaattc 241
            |||||||||||||||||||||||||||||||
Sbjct: 1154 tgatcaataaaaatacaattcaatggaattc 1124

---

>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score =  466 bits (235), Expect = e-128
 Identities = 313/339 (92%)
 Strand = Plus / Plus

                                                                         
Query: 255   ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
             |||||||||||||||||||||||||||  | |||||||| | |||||| |||||||||||
Sbjct: 72772 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaatctgtttttatt 72831

                                                                         
Query: 315   ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
             ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 72832 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 72891

                                                                         
Query: 375   attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
             |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 72892 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 72951

                                                                         
Query: 435   tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
             ||||||||||||||| | | || |||||||||||||||||| ||||||||||||||||||
Sbjct: 72952 tagaaaaagtatctcatatcttgcatttccattcccacaagcaaaaatactataattcac 73011

                                                                         
Query: 495   atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
             |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 73012 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 73071

                                                    
Query: 555   gagttctgtctgatatccacgatctctcttgatctgtaa 593
             || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 73072 gacttccgtgtgatatccgcgatctctcttgatccgtaa 73110



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Plus

                                                                         
Query: 1     aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
             |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 72518 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 72577

                                                                         
Query: 61    ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
             |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 72578 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 72637

                                                                         
Query: 121   agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
             ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 72638 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 72697

                                                                         
Query: 181   caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
             |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 72698 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 72757

              
Query: 241   c 241
             |
Sbjct: 72758 c 72758

---

>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence
          Length = 144459

 Score =  466 bits (235), Expect = e-128
 Identities = 313/339 (92%)
 Strand = Plus / Plus

                                                                        
Query: 255  ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
            |||||||||||||||||||||||||||  | |||||||| | |||||| |||||||||||
Sbjct: 6836 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaatctgtttttatt 6895

                                                                        
Query: 315  ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
            ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 6896 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 6955

                                                                        
Query: 375  attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 6956 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 7015

                                                                        
Query: 435  tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
            ||||||||||||||| | | || |||||||||||||||||| ||||||||||||||||||
Sbjct: 7016 tagaaaaagtatctcatatcttgcatttccattcccacaagcaaaaatactataattcac 7075

                                                                        
Query: 495  atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
            |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 7076 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 7135

                                                   
Query: 555  gagttctgtctgatatccacgatctctcttgatctgtaa 593
            || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 7136 gacttccgtgtgatatccgcgatctctcttgatccgtaa 7174



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 6582 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 6641

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 6642 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 6701

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 6702 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 6761

                                                                        
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
            |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 6762 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 6821

             
Query: 241  c 241
            |
Sbjct: 6822 c 6822

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  466 bits (235), Expect = e-128
 Identities = 313/339 (92%)
 Strand = Plus / Plus

                                                                            
Query: 255      ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
                |||||||||||||||||||||||||||  | |||||||| | |||||| |||||||||||
Sbjct: 10366380 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaatctgtttttatt 10366439

                                                                            
Query: 315      ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
                ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 10366440 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 10366499

                                                                            
Query: 375      attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
                |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 10366500 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 10366559

                                                                            
Query: 435      tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
                ||||||||||||||| | | || |||||||||||||||||| ||||||||||||||||||
Sbjct: 10366560 tagaaaaagtatctcatatcttgcatttccattcccacaagcaaaaatactataattcac 10366619

                                                                            
Query: 495      atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
                |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 10366620 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 10366679

                                                       
Query: 555      gagttctgtctgatatccacgatctctcttgatctgtaa 593
                || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 10366680 gacttccgtgtgatatccgcgatctctcttgatccgtaa 10366718



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Plus

                                                                            
Query: 1        aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
                |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 10366126 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 10366185

                                                                            
Query: 61       ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
                |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 10366186 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 10366245

                                                                            
Query: 121      agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
                ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 10366246 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 10366305

                                                                            
Query: 181      caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
                |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 10366306 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 10366365

                 
Query: 241      c 241
                |
Sbjct: 10366366 c 10366366

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  466 bits (235), Expect = e-128
 Identities = 313/339 (92%)
 Strand = Plus / Plus

                                                                            
Query: 255      ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
                |||||||||||||||||||||||||||  | |||||||| | |||||| |||||||||||
Sbjct: 10372419 ctttagattagttaatcttttttgaaagcttaaaaggggggaagtaaatctgtttttatt 10372478

                                                                            
Query: 315      ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
                ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 10372479 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 10372538

                                                                            
Query: 375      attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
                |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 10372539 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 10372598

                                                                            
Query: 435      tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
                ||||||||||||||| | | || |||||||||||||||||| ||||||||||||||||||
Sbjct: 10372599 tagaaaaagtatctcatatcttgcatttccattcccacaagcaaaaatactataattcac 10372658

                                                                            
Query: 495      atttcgaacaggcatgaatacagcatctataggataacttccatcttgatagttctttct 554
                |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 10372659 atttcgaacaggcatggatacagcatctataggataacttccatcttgagtgttctttct 10372718

                                                       
Query: 555      gagttctgtctgatatccacgatctctcttgatctgtaa 593
                || ||| || |||||||| ||||||||||||||| ||||
Sbjct: 10372719 gacttccgtgtgatatccgcgatctctcttgatccgtaa 10372757



 Score =  337 bits (170), Expect = 2e-89
 Identities = 223/241 (92%)
 Strand = Plus / Plus

                                                                            
Query: 1        aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
                |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 10372165 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 10372224

                                                                            
Query: 61       ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
                |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 10372225 ttctctagagtgtcccatatctgttttccatcttgcatacgaaaactgtcaattctcatc 10372284

                                                                            
Query: 121      agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
                ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 10372285 agatcttcttccgtcttactcaaaaggtccaatagtgtatggatattggcccttttgaga 10372344

                                                                            
Query: 181      caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaatt 240
                |||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||
Sbjct: 10372345 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaatt 10372404

                 
Query: 241      c 241
                |
Sbjct: 10372405 c 10372405

---

>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OSJNBa0034M22, complete sequence
          Length = 149435

 Score =  398 bits (201), Expect = e-108
 Identities = 255/273 (93%)
 Strand = Plus / Plus

                                                                         
Query: 321   gaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaaattacg 380
             ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||||||||
Sbjct: 50650 gaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaaattacg 50709

                                                                         
Query: 381   agaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttctagaaa 440
             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 50710 agaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttctagaaa 50769

                                                                         
Query: 441   aagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcacatttcg 500
             ||||||||| | |||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 50770 aagtatctcatattttgcatttccattcccacaagcaaaaatactataattcacatttcg 50829

                                                                         
Query: 501   aacaggcatgaatacagcatctataggataacttccatcttgatagttctttctgagttc 560
             |||||||||| ||||||||||||||||||||||||||||||||  ||||||||||| |||
Sbjct: 50830 aacaggcatggatacagcatctataggataacttccatcttgagtgttctttctgacttc 50889

                                              
Query: 561   tgtctgatatccacgatctctcttgatctgtaa 593
              || |||||||| ||||||||||||||| ||||
Sbjct: 50890 cgtgtgatatccgcgatctctcttgatccgtaa 50922

---

>gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome 5 PAC clone P0012A07,
              complete sequence
          Length = 136858

 Score =  398 bits (201), Expect = e-108
 Identities = 255/273 (93%)
 Strand = Plus / Plus

                                                                          
Query: 321    gaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaaattacg 380
              ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||||||||
Sbjct: 123478 gaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaaattacg 123537

                                                                          
Query: 381    agaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttctagaaa 440
              |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 123538 agaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttctagaaa 123597

                                                                          
Query: 441    aagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcacatttcg 500
              ||||||||| | |||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 123598 aagtatctcatattttgcatttccattcccacaagcaaaaatactataattcacatttcg 123657

                                                                          
Query: 501    aacaggcatgaatacagcatctataggataacttccatcttgatagttctttctgagttc 560
              |||||||||| ||||||||||||||||||||||||||||||||  ||||||||||| |||
Sbjct: 123658 aacaggcatggatacagcatctataggataacttccatcttgagtgttctttctgacttc 123717

                                               
Query: 561    tgtctgatatccacgatctctcttgatctgtaa 593
               || |||||||| ||||||||||||||| ||||
Sbjct: 123718 cgtgtgatatccgcgatctctcttgatccgtaa 123750

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  398 bits (201), Expect = e-108
 Identities = 255/273 (93%)
 Strand = Plus / Plus

                                                                            
Query: 321      gaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaaattacg 380
                ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||||||||
Sbjct: 12753191 gaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaaattacg 12753250

                                                                            
Query: 381      agaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttctagaaa 440
                |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 12753251 agaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttctagaaa 12753310

                                                                            
Query: 441      aagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcacatttcg 500
                ||||||||| | |||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 12753311 aagtatctcatattttgcatttccattcccacaagcaaaaatactataattcacatttcg 12753370

                                                                            
Query: 501      aacaggcatgaatacagcatctataggataacttccatcttgatagttctttctgagttc 560
                |||||||||| ||||||||||||||||||||||||||||||||  ||||||||||| |||
Sbjct: 12753371 aacaggcatggatacagcatctataggataacttccatcttgagtgttctttctgacttc 12753430

                                                 
Query: 561      tgtctgatatccacgatctctcttgatctgtaa 593
                 || |||||||| ||||||||||||||| ||||
Sbjct: 12753431 cgtgtgatatccgcgatctctcttgatccgtaa 12753463



 Score =  309 bits (156), Expect = 6e-81
 Identities = 218/239 (91%)
 Strand = Plus / Minus

                                                                            
Query: 1        aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
                |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 29226719 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 29226660

                                                                            
Query: 61       ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
                ||||||||||||||| |||| ||||||| ||||| |||| ||||||||||||||||||| 
Sbjct: 29226659 ttctctagagtgtccaatatctgttttccatcttgcatatgaaaactgtcaattctcatc 29226600

                                                                            
Query: 121      agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
                ||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||| |||
Sbjct: 29226599 agatcttcttccgtcttactcaaaaggtccaatagtgcatggatattggcccttttgaga 29226540

                                                                           
Query: 181      caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaat 239
                |||||||| ||||||||||  | ||||||||||||||||||||||||||||||||||||
Sbjct: 29226539 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaat 29226481



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 360      aaataaatcaatcaaattac 379
                ||||||||||||||||||||
Sbjct: 27359558 aaataaatcaatcaaattac 27359539

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  337 bits (170), Expect = 2e-89
 Identities = 227/245 (92%), Gaps = 2/245 (0%)
 Strand = Plus / Plus

                                                                           
Query: 255     ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
               |||||||||||||||||||||||||||  | ||| ||||   ||||||||||||||||||
Sbjct: 3983194 ctttagattagttaatcttttttgaaagcttaaaggggga--agtaaacctgtttttatt 3983251

                                                                           
Query: 315     ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
               ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 3983252 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 3983311

                                                                           
Query: 375     attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
               |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 3983312 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 3983371

                                                                           
Query: 435     tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
               ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 3983372 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 3983431

                    
Query: 495     atttc 499
               |||||
Sbjct: 3983432 atttc 3983436



 Score =  170 bits (86), Expect = 3e-39
 Identities = 119/130 (91%)
 Strand = Plus / Plus

                                                                           
Query: 464     cattcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatcta 523
               |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 3983436 cattcccacaagcaaaaatactataattcacatttcgaacaggcatggatacagcatcta 3983495

                                                                           
Query: 524     taggataacttccatcttgatagttctttctgagttctgtctgatatccacgatctctct 583
               ||||||||||||||||||||  ||||||||||| |||  | ||||||||  |||||||||
Sbjct: 3983496 taggataacttccatcttgagtgttctttctgacttcaatgtgatatccgtgatctctct 3983555

                         
Query: 584     tgatctgtaa 593
               ||||| ||||
Sbjct: 3983556 tgatccgtaa 3983565



 Score =  107 bits (54), Expect = 4e-20
 Identities = 72/78 (92%)
 Strand = Plus / Plus

                                                                           
Query: 164     tattggccctttttagacaattatatgttctagaagttaattctaattgatcaataaaaa 223
               |||||| |||||| ||||||||||||||||||||||  | ||||||||||||||||||||
Sbjct: 3983103 tattggaccttttgagacaattatatgttctagaaggcagttctaattgatcaataaaaa 3983162

                                 
Query: 224     tacaattcaatggaattc 241
               ||||||||| ||||||||
Sbjct: 3983163 tacaattcagtggaattc 3983180



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 86/97 (88%), Gaps = 1/97 (1%)
 Strand = Plus / Minus

                                                                            
Query: 476      aaaaaatactataattcacatttcgaacaggcatgaatacagcatctataggataacttc 535
                |||||| |||||||||||||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 19993711 aaaaaaaactataattcacatttcgaacatgcatggatacaacatctataggataacttc 19993652

                                                     
Query: 536      catcttgatagttctttctgagttctgtctgatatcc 572
                |||| |||  | ||||||||| ||| || ||||||||
Sbjct: 19993651 catcgtgagtg-tctttctgacttccgtgtgatatcc 19993616

---

>dbj|AP005590.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0574F11
          Length = 159891

 Score =  337 bits (170), Expect = 2e-89
 Identities = 227/245 (92%), Gaps = 2/245 (0%)
 Strand = Plus / Plus

                                                                          
Query: 255    ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
              |||||||||||||||||||||||||||  | ||| ||||   ||||||||||||||||||
Sbjct: 114706 ctttagattagttaatcttttttgaaagcttaaaggggga--agtaaacctgtttttatt 114763

                                                                          
Query: 315    ttcttcgaaactagtgccctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaa 374
              ||||| ||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 114764 ttcttggaaacgagtaccctcttcctccgtgtgaagaaaaggaagaaataaatcaatcaa 114823

                                                                          
Query: 375    attacgagaagcctcataaagcgcttccttaggggttaaacttccattagtccatatttc 434
              |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 114824 attacgagaagcctcataaagcgcttccttaggggttaaacttccattggtccatatttc 114883

                                                                          
Query: 435    tagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcac 494
              ||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 114884 tagaaaaagtatctcatattttgcatttccattcccacaagcaaaaatactataattcac 114943

                   
Query: 495    atttc 499
              |||||
Sbjct: 114944 atttc 114948



 Score =  170 bits (86), Expect = 3e-39
 Identities = 119/130 (91%)
 Strand = Plus / Plus

                                                                          
Query: 464    cattcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatcta 523
              |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 114948 cattcccacaagcaaaaatactataattcacatttcgaacaggcatggatacagcatcta 115007

                                                                          
Query: 524    taggataacttccatcttgatagttctttctgagttctgtctgatatccacgatctctct 583
              ||||||||||||||||||||  ||||||||||| |||  | ||||||||  |||||||||
Sbjct: 115008 taggataacttccatcttgagtgttctttctgacttcaatgtgatatccgtgatctctct 115067

                        
Query: 584    tgatctgtaa 593
              ||||| ||||
Sbjct: 115068 tgatccgtaa 115077



 Score =  107 bits (54), Expect = 4e-20
 Identities = 72/78 (92%)
 Strand = Plus / Plus

                                                                          
Query: 164    tattggccctttttagacaattatatgttctagaagttaattctaattgatcaataaaaa 223
              |||||| |||||| ||||||||||||||||||||||  | ||||||||||||||||||||
Sbjct: 114615 tattggaccttttgagacaattatatgttctagaaggcagttctaattgatcaataaaaa 114674

                                
Query: 224    tacaattcaatggaattc 241
              ||||||||| ||||||||
Sbjct: 114675 tacaattcagtggaattc 114692

---

>gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022J22,
              complete sequence
          Length = 142854

 Score =  309 bits (156), Expect = 6e-81
 Identities = 218/239 (91%)
 Strand = Plus / Minus

                                                                          
Query: 1      aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
              |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 110178 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 110119

                                                                          
Query: 61     ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
              ||||||||||||||| |||| ||||||| ||||| |||| ||||||||||||||||||| 
Sbjct: 110118 ttctctagagtgtccaatatctgttttccatcttgcatatgaaaactgtcaattctcatc 110059

                                                                          
Query: 121    agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
              ||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||| |||
Sbjct: 110058 agatcttcttccgtcttactcaaaaggtccaatagtgcatggatattggcccttttgaga 109999

                                                                         
Query: 181    caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaat 239
              |||||||| ||||||||||  | ||||||||||||||||||||||||||||||||||||
Sbjct: 109998 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaat 109940

---

>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
            complete sequence
          Length = 142196

 Score =  309 bits (156), Expect = 6e-81
 Identities = 218/239 (91%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 5400 aaaaaattgcaatggatttaaaactagaacttattcttaggtaaatccattgggagatgc 5341

                                                                        
Query: 61   ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcata 120
            ||||||||||||||| |||| ||||||| ||||| |||| ||||||||||||||||||| 
Sbjct: 5340 ttctctagagtgtccaatatctgttttccatcttgcatatgaaaactgtcaattctcatc 5281

                                                                        
Query: 121  agatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttaga 180
            ||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||| |||
Sbjct: 5280 agatcttcttccgtcttactcaaaaggtccaatagtgcatggatattggcccttttgaga 5221

                                                                       
Query: 181  caattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaat 239
            |||||||| ||||||||||  | ||||||||||||||||||||||||||||||||||||
Sbjct: 5220 caattatacgttctagaaggcagttctaattgatcaataaaaatacaattcaatggaat 5162

---

>gb|DQ069429.1| Nuphar advena RNA polymerase alpha chain (rpoA) gene, partial cds;
           chloroplast
          Length = 1008

 Score =  272 bits (137), Expect = 1e-69
 Identities = 194/213 (91%)
 Strand = Plus / Minus

                                                                       
Query: 336 ttcctcggcgtgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaag 395
           |||||| || ||||||||||||| ||||||||| ||||||||||||||||| || |||||
Sbjct: 702 ttcctccgcatgtagaaaaggaataaataaatcgatcaaattacgagaagcttcgtaaag 643

                                                                       
Query: 396 cgcttccttaggggttaaacttccattagtccatatttctagaaaaagtatctcgtgttt 455
           |||||| ||||| |||||||||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 642 cgcttctttaggagttaaacttccattcgtccatatttcgagaaaaagtatctcttgttt 583

                                                                       
Query: 456 ttcatttccattcccacaagaaaaaatactataattcacatttcgaacaggcatgaatac 515
           |||||| ||||||||| |||||  |||||||| |||| ||||||||||||||||| ||||
Sbjct: 582 ttcattcccattcccataagaatgaatactatgattcgcatttcgaacaggcatggatac 523

                                            
Query: 516 agcatctataggataacttccatcttgatagtt 548
           ||||||||||||||||||||| |||||||||||
Sbjct: 522 agcatctataggataacttccgtcttgatagtt 490



 Score =  115 bits (58), Expect = 2e-22
 Identities = 103/118 (87%)
 Strand = Plus / Minus

                                                                       
Query: 109 tcaattctcataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattg 168
           |||||||||||||||||||||| | ||||||||||||||| ||||| |||||||||||| 
Sbjct: 920 tcaattctcataagatcttcttgactcttactcaaaaggttcaataatgtatgtatatta 861

                                                                     
Query: 169 gccctttttagacaattatatgttctagaagttaattctaattgatcaataaaaatac 226
           | | |||| ||||| ||||| || |||| ||  |||||| ||||||||||||||||||
Sbjct: 860 gactttttgagacagttataagtcctaggaggcaattctgattgatcaataaaaatac 803

---

>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome
          Length = 159930

 Score =  272 bits (137), Expect = 1e-69
 Identities = 194/213 (91%)
 Strand = Plus / Plus

                                                                         
Query: 336   ttcctcggcgtgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaag 395
             |||||| || ||||||||||||| ||||||||| ||||||||||||||||| ||||||||
Sbjct: 84168 ttcctccgcatgtagaaaaggaataaataaatcgatcaaattacgagaagcttcataaag 84227

                                                                         
Query: 396   cgcttccttaggggttaaacttccattagtccatatttctagaaaaagtatctcgtgttt 455
             |||||||||||| |||||||||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 84228 cgcttccttaggagttaaacttccattcgtccatatttcaagaaaaagtatctcttgttt 84287

                                                                         
Query: 456   ttcatttccattcccacaagaaaaaatactataattcacatttcgaacaggcatgaatac 515
              ||||| ||||||||| |||||  |||||||| |||| ||||||||||||||||| ||||
Sbjct: 84288 ctcattcccattcccataagaatgaatactatgattcgcatttcgaacaggcatggatac 84347

                                              
Query: 516   agcatctataggataacttccatcttgatagtt 548
             ||||||||||||||| ||||| |||||||||||
Sbjct: 84348 agcatctataggatagcttccgtcttgatagtt 84380



 Score =  123 bits (62), Expect = 7e-25
 Identities = 104/118 (88%)
 Strand = Plus / Plus

                                                                         
Query: 109   tcaattctcataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattg 168
             |||||||||||||||||||||| | | |||||||||||||||| || |||||||||||| 
Sbjct: 83944 tcaattctcataagatcttcttgacttttactcaaaaggtccagtaatgtatgtatatta 84003

                                                                       
Query: 169   gccctttttagacaattatatgttctagaagttaattctaattgatcaataaaaatac 226
             | |||||| ||||| ||||| || |||| ||  |||||||||||||||||||||||||
Sbjct: 84004 gaccttttgagacagttataagtcctaggaggcaattctaattgatcaataaaaatac 84061

---

>dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1147B12
          Length = 127902

 Score =  264 bits (133), Expect = 3e-67
 Identities = 220/249 (88%), Gaps = 9/249 (3%)
 Strand = Plus / Plus

                                                                         
Query: 1     aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
             |||||| |||||||| |||||||| |||  ||||||||| ||||||| ||||||||||||
Sbjct: 71039 aaaaaattgcaatggatttaaaactagaacttattcttacgtaaatccattgggagatgc 71098

                                                                         
Query: 61    ttctctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaatt------ 114
             |||||||||||||||||||||||||||| ||||| |||||||||||||||||||      
Sbjct: 71099 ttctctagagtgtcccatatatgttttccatcttgcatacgaaaactgtcaatttgtcaa 71158

                                                                         
Query: 115   --ctcataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccc 172
               ||||| ||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||
Sbjct: 71159 ttctcatcagatcttcttccgtcttactcaaaaggtcaaatagtgtatgaatattagccc 71218

                                                                         
Query: 173   tttttagacaattatatgttctagaagttaattctaattgatcaataaaaatacaattca 232
             |||| ||||||||||| ||||||||||  | |||||||||||| |||||||||||| |||
Sbjct: 71219 ttttgagacaattatacgttctagaaggcagttctaattgatcgataaaaatacaa-tca 71277

                      
Query: 233   atggaattc 241
             |||||||||
Sbjct: 71278 atggaattc 71286



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/71 (88%), Gaps = 2/71 (2%)
 Strand = Plus / Plus

                                                                         
Query: 255   ctttagattagttaatcttttttgaaaagtaaaaaggggtggagtaaacctgtttttatt 314
             ||||||||||||||||||||||| |||  | ||||||||   ||||||||||||||||||
Sbjct: 71300 ctttagattagttaatcttttttaaaagcttaaaagggga--agtaaacctgtttttatt 71357

                        
Query: 315   ttcttcgaaac 325
             ||||| |||||
Sbjct: 71358 ttcttggaaac 71368

---

>gb|AY757818.1| Acorus gramineus RpoA (rpoA) gene, complete cds; and PetD (petD)
           gene, partial cds; chloroplast
          Length = 1655

 Score =  260 bits (131), Expect = 5e-66
 Identities = 236/271 (87%)
 Strand = Plus / Minus

                                                                       
Query: 278 gaaaagtaaaaaggggtggagtaaacctgtttttattttcttcgaaactagtgccctctt 337
           |||| |||||| |||||  |||||||||||||| |||||| |||||| || || ||||||
Sbjct: 760 gaaaggtaaaagggggtacagtaaacctgttttgattttcctcgaaattaatgtcctctt 701

                                                                       
Query: 338 cctcggcgtgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcg 397
           |||| || ||||||||||||| ||||||||||||||||||||| ||||| || | ||| |
Sbjct: 700 cctctgcatgtagaaaaggaataaataaatcaatcaaattacgggaagcttcgtgaagtg 641

                                                                       
Query: 398 cttccttaggggttaaacttccattagtccatatttctagaaaaagtatctcgtgttttt 457
           |||| ||||| |||||||||||||| ||||||||||| || ||||||||||| ||||| |
Sbjct: 640 cttctttaggagttaaacttccatttgtccatatttcgaggaaaagtatctcttgtttct 581

                                                                       
Query: 458 catttccattcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacag 517
            ||| ||||| ||| |||||  |||||||| |||| ||||||||||||||||| ||||||
Sbjct: 580 gattaccatttccataagaatgaatactatgattcgcatttcgaacaggcatggatacag 521

                                          
Query: 518 catctataggataacttccatcttgatagtt 548
           ||||||| |||||||||||||||||| ||||
Sbjct: 520 catctatcggataacttccatcttgagagtt 490



 Score =  170 bits (86), Expect = 3e-39
 Identities = 179/210 (85%)
 Strand = Plus / Minus

                                                                        
Query: 31   ttattcttaagtaaatcaattgggagatgcttctctagagtgtcccatatatgttttcta 90
            ||||||||| |||||||||||| || |||||||  |||||||||| |||| ||||||  |
Sbjct: 1007 ttattcttaggtaaatcaattgcgaaatgcttccgtagagtgtccaatatctgttttaca 948

                                                                        
Query: 91   tcttccatacgaaaactgtcaattctcataagatcttcttcagtcttactcaaaaggtcc 150
            ||||| || ||||||   |||||| ||||||||||||||| | | |||||||||||||||
Sbjct: 947  tcttctattcgaaaatattcaattttcataagatcttcttgactgttactcaaaaggtcc 888

                                                                        
Query: 151  aatagtgtatgtatattggccctttttagacaattatatgttctagaagttaattctaat 210
            |||| |||||||||||||| |||||| ||||||||||| || || | ||  |||||| ||
Sbjct: 887  aataatgtatgtatattggaccttttgagacaattataggtcctgggaggcaattctgat 828

                                          
Query: 211  tgatcaataaaaatacaattcaatggaatt 240
            || |||||||||||||| ||||||| ||||
Sbjct: 827  tggtcaataaaaatacatttcaatgcaatt 798

---

>gb|DQ069427.1| Acorus americanus RNA polymerase alpha chain (rpoA) gene, partial
           cds; chloroplast
          Length = 1011

 Score =  260 bits (131), Expect = 5e-66
 Identities = 236/271 (87%)
 Strand = Plus / Minus

                                                                       
Query: 278 gaaaagtaaaaaggggtggagtaaacctgtttttattttcttcgaaactagtgccctctt 337
           |||| |||||| |||||  |||||||||||||| |||||| |||||| || || ||||||
Sbjct: 760 gaaaggtaaaagggggtacagtaaacctgttttgattttcctcgaaattaatgtcctctt 701

                                                                       
Query: 338 cctcggcgtgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcg 397
           |||| || ||||||||||||| ||||||||||||||||||||| ||||| || | ||| |
Sbjct: 700 cctctgcatgtagaaaaggaataaataaatcaatcaaattacgggaagcttcgtgaagtg 641

                                                                       
Query: 398 cttccttaggggttaaacttccattagtccatatttctagaaaaagtatctcgtgttttt 457
           |||| ||||| |||||||||||||| ||||||||||| || ||||||||||| ||||| |
Sbjct: 640 cttctttaggagttaaacttccatttgtccatatttcgaggaaaagtatctcttgtttct 581

                                                                       
Query: 458 catttccattcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacag 517
            ||| ||||| ||| |||||  |||||||| |||| ||||||||||||||||| ||||||
Sbjct: 580 gattaccatttccataagaatgaatactatgattcgcatttcgaacaggcatggatacag 521

                                          
Query: 518 catctataggataacttccatcttgatagtt 548
           ||||||| |||||||||||||||||| ||||
Sbjct: 520 catctatcggataacttccatcttgagagtt 490



 Score =  178 bits (90), Expect = 1e-41
 Identities = 180/210 (85%)
 Strand = Plus / Minus

                                                                        
Query: 31   ttattcttaagtaaatcaattgggagatgcttctctagagtgtcccatatatgttttcta 90
            ||||||||| |||||||||||| || |||||||| |||||||||| |||| ||||||  |
Sbjct: 1007 ttattcttaggtaaatcaattgcgaaatgcttctgtagagtgtccaatatctgttttaca 948

                                                                        
Query: 91   tcttccatacgaaaactgtcaattctcataagatcttcttcagtcttactcaaaaggtcc 150
            ||||| || ||||||   |||||| ||||||||||||||| | | |||||||||||||||
Sbjct: 947  tcttctattcgaaaatattcaattttcataagatcttcttgactgttactcaaaaggtcc 888

                                                                        
Query: 151  aatagtgtatgtatattggccctttttagacaattatatgttctagaagttaattctaat 210
            |||| |||||||||||||| |||||| ||||||||||| || || | ||  |||||| ||
Sbjct: 887  aataatgtatgtatattggaccttttgagacaattataggtcctgggaggcaattctgat 828

                                          
Query: 211  tgatcaataaaaatacaattcaatggaatt 240
            || |||||||||||||| ||||||| ||||
Sbjct: 827  tggtcaataaaaatacatttcaatgcaatt 798

---

>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score =  260 bits (131), Expect = 5e-66
 Identities = 236/271 (87%)
 Strand = Plus / Plus

                                                                         
Query: 278   gaaaagtaaaaaggggtggagtaaacctgtttttattttcttcgaaactagtgccctctt 337
             |||| |||||| |||||  |||||||||||||| |||||| |||||| || || ||||||
Sbjct: 77910 gaaaggtaaaagggggtacagtaaacctgttttgattttcctcgaaattaatgtcctctt 77969

                                                                         
Query: 338   cctcggcgtgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcg 397
             |||| || ||||||||||||| ||||||||||||||||||||| ||||| || | ||| |
Sbjct: 77970 cctctgcatgtagaaaaggaataaataaatcaatcaaattacgggaagcttcgtgaagtg 78029

                                                                         
Query: 398   cttccttaggggttaaacttccattagtccatatttctagaaaaagtatctcgtgttttt 457
             |||| ||||| |||||||||||||| ||||||||||| || ||||||||||| ||||| |
Sbjct: 78030 cttctttaggagttaaacttccatttgtccatatttcgaggaaaagtatctcttgtttct 78089

                                                                         
Query: 458   catttccattcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacag 517
              ||| ||||| ||| |||||  |||||||| |||| ||||||||||||||||| ||||||
Sbjct: 78090 gattaccatttccataagaatgaatactatgattcgcatttcgaacaggcatggatacag 78149

                                            
Query: 518   catctataggataacttccatcttgatagtt 548
             ||||||| |||||||||||||||||| ||||
Sbjct: 78150 catctatcggataacttccatcttgagagtt 78180



 Score =  178 bits (90), Expect = 1e-41
 Identities = 180/210 (85%)
 Strand = Plus / Plus

                                                                         
Query: 31    ttattcttaagtaaatcaattgggagatgcttctctagagtgtcccatatatgttttcta 90
             ||||||||| |||||||||||| || |||||||| |||||||||| |||| ||||||  |
Sbjct: 77663 ttattcttaggtaaatcaattgcgaaatgcttctgtagagtgtccaatatctgttttaca 77722

                                                                         
Query: 91    tcttccatacgaaaactgtcaattctcataagatcttcttcagtcttactcaaaaggtcc 150
             ||||| || ||||||   |||||| ||||||||||||||| | | |||||||||||||||
Sbjct: 77723 tcttctattcgaaaatattcaattttcataagatcttcttgactgttactcaaaaggtcc 77782

                                                                         
Query: 151   aatagtgtatgtatattggccctttttagacaattatatgttctagaagttaattctaat 210
             |||| |||||||||||||| |||||| ||||||||||| || || | ||  |||||| ||
Sbjct: 77783 aataatgtatgtatattggaccttttgagacaattataggtcctgggaggcaattctgat 77842

                                           
Query: 211   tgatcaataaaaatacaattcaatggaatt 240
             || |||||||||||||| ||||||| ||||
Sbjct: 77843 tggtcaataaaaatacatttcaatgcaatt 77872

---

>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome
          Length = 153337

 Score =  250 bits (126), Expect = 5e-63
 Identities = 186/206 (90%)
 Strand = Plus / Plus

                                                                         
Query: 343   gcgtgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcc 402
             |||||||||||||||| ||||||||||||||||||||||||||| || | ||| ||||| 
Sbjct: 79494 gcgtgtagaaaaggaataaataaatcaatcaaattacgagaagcttcgtgaagtgcttct 79553

                                                                         
Query: 403   ttaggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcattt 462
             ||||| |||||||||||||| ||||||||||| |||||||||||||| ||||| ||||| 
Sbjct: 79554 ttaggagttaaacttccatttgtccatatttcaagaaaaagtatctcttgtttctcattc 79613

                                                                         
Query: 463   ccattcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatct 522
             ||| ||||| |||||  |||||||| |||| ||||||||||||||||| |||| ||||||
Sbjct: 79614 ccactcccataagaatgaatactatgattcgcatttcgaacaggcatggatacggcatct 79673

                                       
Query: 523   ataggataacttccatcttgatagtt 548
             ||||||||||||||||||||||||||
Sbjct: 79674 ataggataacttccatcttgatagtt 79699



 Score =  170 bits (86), Expect = 3e-39
 Identities = 179/210 (85%)
 Strand = Plus / Plus

                                                                         
Query: 31    ttattcttaagtaaatcaattgggagatgcttctctagagtgtcccatatatgttttcta 90
             ||||||||| |||||||||||  || |||||||| |||| ||||| |||| |||||| ||
Sbjct: 79176 ttattcttaggtaaatcaattccgaaatgcttctgtagaatgtccaatatttgttttata 79235

                                                                         
Query: 91    tcttccatacgaaaactgtcaattctcataagatcttcttcagtcttactcaaaaggtcc 150
             ||||| || ||||||   |||||||||||||||||||||| | | ||| |||||||||||
Sbjct: 79236 tcttctatgcgaaaatgttcaattctcataagatcttcttgactgttattcaaaaggtcc 79295

                                                                         
Query: 151   aatagtgtatgtatattggccctttttagacaattatatgttctagaagttaattctaat 210
             |||| |||||||||||||| |||||| ||||||||||| || ||||  |  |||||| ||
Sbjct: 79296 aataatgtatgtatattggaccttttcagacaattataggtcctagtgggcaattctgat 79355

                                           
Query: 211   tgatcaataaaaatacaattcaatggaatt 240
             || |||||||||||||| ||||||| ||||
Sbjct: 79356 tggtcaataaaaatacatttcaatgcaatt 79385

---

>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome
          Length = 160301

 Score =  244 bits (123), Expect = 3e-61
 Identities = 186/207 (89%)
 Strand = Plus / Plus

                                                                         
Query: 346   tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
             ||||||||||||| |||||||||||||||||| |||||||| |||| ||| ||||| || 
Sbjct: 82636 tgtagaaaaggaataaataaatcaatcaaattgcgagaagcttcatgaagtgcttctttc 82695

                                                                         
Query: 406   ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
             || |||||||||||||| |||||||||||||||||||||||||| |||||||||||  ||
Sbjct: 82696 ggagttaaacttccatttgtccatatttctagaaaaagtatctcctgtttttcattatca 82755

                                                                         
Query: 466   ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
             |||||| || ||  |||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 82756 ttcccataacaatgaatactatgattcgcatttcgaacaggcatgaatacagcatctata 82815

                                        
Query: 526   ggataacttccatcttgatagttcttt 552
             ||||||||||| || ||| ||||||||
Sbjct: 82816 ggataacttccgtcgtgaaagttcttt 82842



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 105/127 (82%)
 Strand = Plus / Plus

                                                                         
Query: 109   tcaattctcataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattg 168
             |||||| ||||||| ||||||  | | ||| ||||||||||||||| |||||||||||||
Sbjct: 82399 tcaattttcataaggtcttctcgactgttattcaaaaggtccaataatgtatgtatattg 82458

                                                                         
Query: 169   gccctttttagacaattatatgttctagaagttaattctaattgatcaataaaaatacaa 228
             | | |||| |||||||||||  | || | ||  |||||| |||| |||||||||||| | 
Sbjct: 82459 gactttttgagacaattatagatcctgggaggcaattctgattggtcaataaaaatatat 82518

                    
Query: 229   ttcaatg 235
             |||||||
Sbjct: 82519 ttcaatg 82525

---

>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome
          Length = 160286

 Score =  244 bits (123), Expect = 3e-61
 Identities = 183/203 (90%)
 Strand = Plus / Plus

                                                                         
Query: 346   tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
             ||||||||||||| |||||||||||| ||||| || || || |||| ||| ||||| |||
Sbjct: 83011 tgtagaaaaggaataaataaatcaattaaattccgggaggcttcatgaagtgcttcttta 83070

                                                                         
Query: 406   ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
             || ||||||||||| || ||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 83071 ggagttaaacttccgtttgtccatatttcgagaaaaagtatctcttgtttttcatttcca 83130

                                                                         
Query: 466   ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
             |||||| |||||  |||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 83131 ttcccataagaatgaatactatgattcgcatttcgaacaggcatgaatacagcatctata 83190

                                    
Query: 526   ggataacttccatcttgatagtt 548
             |||||||||||||||||| ||||
Sbjct: 83191 ggataacttccatcttgaaagtt 83213



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 131/161 (81%)
 Strand = Plus / Plus

                                                                         
Query: 64    tctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcataaga 123
             |||||| ||||| |||| ||||||  |||||| || ||||||   || ||| ||||||| 
Sbjct: 82729 tctagactgtccaatatctgttttacatcttctatgcgaaaatattccattttcataagg 82788

                                                                         
Query: 124   tcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttagacaa 183
             ||||||| | ||||| |||||||||| |||| |||||||||||||  |||||| || |||
Sbjct: 82789 tcttcttgactcttattcaaaaggtcaaataatgtatgtatattgtaccttttgaggcaa 82848

                                                      
Query: 184   ttatatgttctagaagttaattctaattgatcaataaaaat 224
             ||||| || || | ||  ||||| ||||| |||||||||||
Sbjct: 82849 ttataggtcctgggaggcaattcgaattggtcaataaaaat 82889

---

>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome
          Length = 148964

 Score =  238 bits (120), Expect = 2e-59
 Identities = 186/208 (89%)
 Strand = Plus / Plus

                                                                         
Query: 332   cctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcat 391
             |||||||||| || |||||||||||||  |||||||||||||||||||||||||| ||||
Sbjct: 80010 cctcttcctctgcatgtagaaaaggaatcaataaatcaatcaaattacgagaagcttcat 80069

                                                                         
Query: 392   aaagcgcttccttaggggttaaacttccattagtccatatttctagaaaaagtatctcgt 451
             |||| ||||| ||||| |||||||||||||| ||||||||||||| ||| |||||||| |
Sbjct: 80070 aaagtgcttctttaggagttaaacttccattcgtccatatttctataaagagtatctctt 80129

                                                                         
Query: 452   gtttttcatttccattcccacaagaaaaaatactataattcacatttcgaacaggcatga 511
             |||||||||| ||||||||| |||||  |||||||| |||| ||||||||||||||||  
Sbjct: 80130 gtttttcattcccattcccataagaatgaatactatgattcgcatttcgaacaggcatag 80189

                                         
Query: 512   atacagcatctataggataacttccatc 539
             |||||  |||||||||||||||||||||
Sbjct: 80190 atacaatatctataggataacttccatc 80217



 Score =  117 bits (59), Expect = 4e-23
 Identities = 110/127 (86%)
 Strand = Plus / Plus

                                                                         
Query: 116   tcataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggcccttt 175
             ||||||||||||||| | | | ||||||||||||||||| ||||||||||||||  ||||
Sbjct: 79794 tcataagatcttcttgactgtgactcaaaaggtccaataatgtatgtatattggatcttt 79853

                                                                         
Query: 176   ttagacaattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatg 235
             | ||||||||||| || || ||||  |||||| |||| ||||||||||||||  ||||||
Sbjct: 79854 tgagacaattataggtcctggaagacaattctgattggtcaataaaaatacatgtcaatg 79913

                    
Query: 236   gaattcc 242
             |||||||
Sbjct: 79914 gaattcc 79920

---

>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome
          Length = 160928

 Score =  236 bits (119), Expect = 7e-59
 Identities = 182/203 (89%)
 Strand = Plus / Plus

                                                                         
Query: 346   tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
             ||||||||||||| ||||||||||||||||||||| || || |||| ||| ||||| |||
Sbjct: 83073 tgtagaaaaggaataaataaatcaatcaaattacgggaggcttcatgaagtgcttcttta 83132

                                                                         
Query: 406   ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
             || |||||||| ||||| ||||||||||| |||||||||||||| ||| ||||||| |||
Sbjct: 83133 ggagttaaactcccatttgtccatatttcgagaaaaagtatctcttgtctttcattccca 83192

                                                                         
Query: 466   ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
             |||||| |||||  |||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 83193 ttcccataagaatgaatactatgattcgcatttcgaacaggcatgaatacagcatctata 83252

                                    
Query: 526   ggataacttccatcttgatagtt 548
             ||||||||||| |||||| ||||
Sbjct: 83253 ggataacttccgtcttgaaagtt 83275



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 164/204 (80%)
 Strand = Plus / Plus

                                                                         
Query: 31    ttattcttaagtaaatcaattgggagatgcttctctagagtgtcccatatatgttttcta 90
             ||||||||  || ||||||||| || ||| || |||||| || || |||  ||||||  |
Sbjct: 82758 ttattcttcggttaatcaattgtgaaatgtttttctagaatgcccaataactgttttaca 82817

                                                                         
Query: 91    tcttccatacgaaaactgtcaattctcataagatcttcttcagtcttactcaaaaggtcc 150
             ||||| || ||||||   |||||| |||||||||| | || | ||||| |||||||||| 
Sbjct: 82818 tcttctatgcgaaaatcttcaattttcataagatccttttgactcttattcaaaaggtct 82877

                                                                         
Query: 151   aatagtgtatgtatattggccctttttagacaattatatgttctagaagttaattctaat 210
             |||| |||||||||||||| |||||| || ||||||||  | || | ||  |||||||||
Sbjct: 82878 aataatgtatgtatattggaccttttgaggcaattatagatcctgggaggcaattctaat 82937

                                     
Query: 211   tgatcaataaaaatacaattcaat 234
             || |||||||||||| | ||||||
Sbjct: 82938 tggtcaataaaaatatatttcaat 82961

---

>emb|AJ506040.1|SCO506040 Zea mays transgenic line CBH-351, insertion 1
          Length = 239

 Score =  230 bits (116), Expect = 4e-57
 Identities = 162/178 (91%)
 Strand = Plus / Minus

                                                                       
Query: 65  ctagagtgtcccatatatgttttctatcttccatacgaaaactgtcaattctcataagat 124
           ||||||||||||||||  |||||| |||||||||||| ||||| | |||   ||||||||
Sbjct: 239 ctagagtgtcccatatcagttttccatcttccatacggaaactattaatctgcataagat 180

                                                                       
Query: 125 cttcttcagtcttactcaaaaggtccaatagtgtatgtatattggccctttttagacaat 184
           |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 179 cttcttcagtcttactcaaaaggtccaatagtgtatgtntattggcccttttgagacaat 120

                                                                     
Query: 185 tatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaattcc 242
           || | ||||||||||  |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 119 tanacgttctagaaggcaattctaattgatcaataaaaatacaatacaatggaattcc 62

---

>emb|AJ243345.1|SAL243345 Sinapis alba chloroplast putative RNA polymerase alpha subunit
           (PEP)
          Length = 1050

 Score =  222 bits (112), Expect = 1e-54
 Identities = 175/196 (89%)
 Strand = Plus / Minus

                                                                       
Query: 346 tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
           ||||||||||||| |||||||| ||||||||| || || || |||||||| ||||| |||
Sbjct: 743 tgtagaaaaggaataaataaattaatcaaattccgggaggcttcataaagtgcttcttta 684

                                                                       
Query: 406 ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
           || |||||||||||||| ||||||||||||| |||||| ||||| ||||||||||| |||
Sbjct: 683 ggagttaaacttccatttgtccatatttctataaaaagaatctcttgtttttcattccca 624

                                                                       
Query: 466 ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
           |||||| |||||  |||||||| |||| ||||| ||||||||||||||||||||||||||
Sbjct: 623 ttcccataagaatgaatactatgattcgcattttgaacaggcatgaatacagcatctata 564

                           
Query: 526 ggataacttccatctt 541
           |||||||||| |||||
Sbjct: 563 ggataacttcgatctt 548



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 91/108 (84%)
 Strand = Plus / Minus

                                                                       
Query: 118 ataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggcccttttt 177
           ||||| ||||||| | | ||| ||||||| ||||||| |||||||||||||| | |||| 
Sbjct: 971 ataaggtcttcttgactgttattcaaaagatccaataatgtatgtatattggactttttg 912

                                                           
Query: 178 agacaattatatgttctagaagttaattctaattgatcaataaaaata 225
           |||||||||||  |||| | ||  ||||||||||| ||||||||||||
Sbjct: 911 agacaattatagattctgggaggcaattctaattggtcaataaaaata 864

---

>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome
          Length = 152218

 Score =  220 bits (111), Expect = 4e-54
 Identities = 189/215 (87%)
 Strand = Plus / Plus

                                                                         
Query: 334   tcttcctcggcgtgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataa 393
             ||||| || ||||||| ||| |||| |||||||||||||||||| || || || ||||||
Sbjct: 76882 tcttcttctgcgtgtaaaaagggaataaataaatcaatcaaattccgggaggcttcataa 76941

                                                                         
Query: 394   agcgcttccttaggggttaaacttccattagtccatatttctagaaaaagtatctcgtgt 453
             |||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||| |||
Sbjct: 76942 agcgcttccttaggagttaaacttccatttgtccatatttcgagaaagagtatctcttgt 77001

                                                                         
Query: 454   ttttcatttccattcccacaagaaaaaatactataattcacatttcgaacaggcatgaat 513
             |||||||| |||||| || |||||  |||||||| ||| ||||||||||||||||| |||
Sbjct: 77002 ttttcattcccattcacataagaatgaatactatgatttacatttcgaacaggcataaat 77061

                                                
Query: 514   acagcatctataggataacttccatcttgatagtt 548
                ||||||||||||||||||||||||||| ||||
Sbjct: 77062 gtggcatctataggataacttccatcttgaaagtt 77096



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Plus

                                                                         
Query: 109   tcaattctcataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattg 168
             |||||| ||| ||| ||||||| | | ||| ||||||| || |||| |||||| ||||||
Sbjct: 76651 tcaattttcagaaggtcttcttgactgttattcaaaagttctaataatgtatgaatattg 76710

                                                                     
Query: 169   gccctttttagacaattatatgttctagaagttaattctaattgatcaataaaaat 224
             |  ||||| |||||||||||  | || | ||  ||||||||||| |||||||||||
Sbjct: 76711 gatcttttgagacaattatagatcctgggaggcaattctaattggtcaataaaaat 76766

---

>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence
          Length = 153482

 Score =  218 bits (110), Expect = 2e-53
 Identities = 170/190 (89%)
 Strand = Plus / Plus

                                                                         
Query: 346   tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
             ||||||||||||| |||||||| ||||||||| || || || |||| ||| ||||| |||
Sbjct: 77281 tgtagaaaaggaataaataaattaatcaaattccgggaggcttcatgaagtgcttcttta 77340

                                                                         
Query: 406   ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
             || |||||||||||||| |||||||||||||||||||| ||||| ||||||||||| |||
Sbjct: 77341 ggagttaaacttccatttgtccatatttctagaaaaagaatctcttgtttttcattccca 77400

                                                                         
Query: 466   ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
             |||||| |||||  |||||||| |||| ||||| ||||||||||||||||||||||||||
Sbjct: 77401 ttcccataagaatgaatactatgattcgcattttgaacaggcatgaatacagcatctata 77460

                       
Query: 526   ggataacttc 535
             ||||||||||
Sbjct: 77461 ggataacttc 77470



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 91/108 (84%)
 Strand = Plus / Plus

                                                                         
Query: 118   ataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggcccttttt 177
             ||||| ||||||| | | ||| ||||||| ||||||| |||||||||||||| | |||| 
Sbjct: 77053 ataaggtcttcttgactgttattcaaaagatccaataatgtatgtatattggactttttg 77112

                                                             
Query: 178   agacaattatatgttctagaagttaattctaattgatcaataaaaata 225
             |||||||||||  |||| | ||  ||||||||||| ||||||||||||
Sbjct: 77113 agacaattatagattctgggaggcaattctaattggtcaataaaaata 77160

---

>emb|X15645.1|CHPSRPOA Pea chloroplast rpl36 (partial), rps11, rpoA, and petD (partial)
            genes for ribosomal proteins L36 and S11, RNA polymerase
            alpha subunit, and cytochrome bf complex subunit IV
          Length = 2096

 Score =  210 bits (106), Expect = 4e-51
 Identities = 175/198 (88%)
 Strand = Plus / Minus

                                                                        
Query: 346  tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
            |||| |||||||| |||||||||||||||||| || || || |||||||| |||||||||
Sbjct: 1539 tgtaaaaaaggaataaataaatcaatcaaattccgggaggcttcataaagtgcttcctta 1480

                                                                        
Query: 406  ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
            || |||||||||||||| ||||||||||| ||||| |||||||| ||||||| |||||||
Sbjct: 1479 ggagttaaacttccatttgtccatatttccagaaatagtatctcttgtttttgatttcca 1420

                                                                        
Query: 466  ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
            ||| || |||||   ||||||| |||  |||||| |||||||||||||||||||||||||
Sbjct: 1419 ttcacataagaatggatactatgatttgcatttctaacaggcatgaatacagcatctata 1360

                              
Query: 526  ggataacttccatcttga 543
            | ||||||||||||||||
Sbjct: 1359 gtataacttccatcttga 1342



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                        
Query: 109  tcaattctcataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattg 168
            |||||| ||||||| ||||||| | ||||| ||||||| ||||||| |||||||||||||
Sbjct: 1788 tcaattttcataaggtcttcttgactcttattcaaaagttccaatactgtatgtatattg 1729

                                
Query: 169  gccctttttagacaattata 188
            | | |||| |||||||||||
Sbjct: 1728 gactttttaagacaattata 1709

---

>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete
             sequence
          Length = 163935

 Score =  206 bits (104), Expect = 6e-50
 Identities = 176/200 (88%)
 Strand = Plus / Plus

                                                                         
Query: 349   agaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttccttaggg 408
             ||||| ||||||||||||||||| ||||| || || || || | ||| ||||| ||||| 
Sbjct: 83199 agaaagggaagaaataaatcaattaaattccgggaggcttcgtgaagtgcttctttagga 83258

                                                                         
Query: 409   gttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttccattc 468
             |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||  ||||
Sbjct: 83259 gttaaacttccatttgtccatatttcgagaaaaagtatctcttgtttttcattttgattc 83318

                                                                         
Query: 469   ccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctatagga 528
             ||| |||||  |||||||| |||| |||||||||||||||| ||||||||||||||||||
Sbjct: 83319 ccataagaatgaatactatgattcgcatttcgaacaggcataaatacagcatctatagga 83378

                                 
Query: 529   taacttccatcttgatagtt 548
             |||||||| |||||| ||||
Sbjct: 83379 taacttccgtcttgaaagtt 83398



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 96/120 (80%)
 Strand = Plus / Plus

                                                                         
Query: 116   tcataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggcccttt 175
             ||||||| ||||||| | ||||| ||||||||||| ||| |||||| || |||| || ||
Sbjct: 82966 tcataaggtcttcttgactcttattcaaaaggtccgataatgtatggatcttggaccctt 83025

                                                                         
Query: 176   ttagacaattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatg 235
             | ||  |||||||  | || |  |  ||||||||||| |||||||||||| | |||||||
Sbjct: 83026 tgagggaattatagatcctggggggcaattctaattggtcaataaaaatagatttcaatg 83085



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 257   ttagattagttaatcttttttgaaaagtaaaaagggg 293
             |||| |||| |||| |||| |||||||||||||||||
Sbjct: 83107 ttagcttagctaattttttatgaaaagtaaaaagggg 83143

---

>gb|DQ069430.1| Ranunculus macranthus RNA polymerase alpha chain (rpoA) gene,
           partial cds; chloroplast
          Length = 1017

 Score =  204 bits (103), Expect = 2e-49
 Identities = 169/191 (88%)
 Strand = Plus / Minus

                                                                       
Query: 346 tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
           ||||||||||||| |||||||||||| ||||| || || || || ||||| ||||| |||
Sbjct: 692 tgtagaaaaggaataaataaatcaattaaattgcgcgaggcttcgtaaagtgcttcttta 633

                                                                       
Query: 406 ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
           || |||||||||||||| ||||||||||||||||||||||| || || |||||||| |||
Sbjct: 632 ggagttaaacttccattcgtccatatttctagaaaaagtatttcctggttttcattccca 573

                                                                       
Query: 466 ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
           || ||| |||||  |||||||| |||  ||||||||||||||||||||||||||||||||
Sbjct: 572 ttaccataagaatgaatactatgatttgcatttcgaacaggcatgaatacagcatctata 513

                      
Query: 526 ggataacttcc 536
           |||||||||||
Sbjct: 512 ggataacttcc 502



 Score =  111 bits (56), Expect = 3e-21
 Identities = 137/164 (83%)
 Strand = Plus / Minus

                                                                       
Query: 71  tgtcccatatatgttttctatcttccatacgaaaactgtcaattctcataagatcttctt 130
           ||||| |||| ||||||  |||||| || ||||||   || ||| |||||||||||||||
Sbjct: 970 tgtccaatatctgttttacatcttctatgcgaaaatgctctattttcataagatcttctt 911

                                                                       
Query: 131 cagtcttactcaaaaggtccaatagtgtatgtatattggccctttttagacaattatatg 190
            | ||||| |||| ||||| |||| |||||||||||| |||||||| || |||||||| |
Sbjct: 910 gactcttattcaagaggtctaataatgtatgtatattagcccttttaaggcaattatagg 851

                                                       
Query: 191 ttctagaagttaattctaattgatcaataaaaatacaattcaat 234
           | || ||||  |||||| ||||||||||||||||||| ||||||
Sbjct: 850 tcctggaaggcaattctgattgatcaataaaaatacatttcaat 807

---

>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA
          Length = 155943

 Score =  204 bits (103), Expect = 2e-49
 Identities = 178/203 (87%)
 Strand = Plus / Plus

                                                                         
Query: 346   tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
             |||| ||| |||| |||||||||||| ||||| || || || |||| ||| ||||| || 
Sbjct: 80780 tgtaaaaagggaataaataaatcaattaaatttcgggatgcttcatgaagtgcttctttc 80839

                                                                         
Query: 406   ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
             || ||||||||||| || ||||||||||| |||||||||||||| ||||||||||| |||
Sbjct: 80840 ggagttaaacttccgtttgtccatatttcgagaaaaagtatctcttgtttttcattccca 80899

                                                                         
Query: 466   ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
             |||||| |||||  |||||||| |||| | ||||||||||||||||||||||||||||||
Sbjct: 80900 ttcccataagaatgaatactatgattcgcgtttcgaacaggcatgaatacagcatctata 80959

                                    
Query: 526   ggataacttccatcttgatagtt 548
             |||||||||||||||||| ||||
Sbjct: 80960 ggataacttccatcttgaaagtt 80982



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 95/116 (81%)
 Strand = Plus / Plus

                                                                         
Query: 109   tcaattctcataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattg 168
             |||||| |||||||||||||||   | ||| ||||||||||||| | ||||| |||||||
Sbjct: 80543 tcaattttcataagatcttcttggctgttattcaaaaggtccaacaatgtatatatattg 80602

                                                                     
Query: 169   gccctttttagacaattatatgttctagaagttaattctaattgatcaataaaaat 224
             | | |||| || ||||||||  | || ||||  |||||| |||| |||||||||||
Sbjct: 80603 gacattttgaggcaattatagatcctggaaggcaattctgattggtcaataaaaat 80658

---

>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan)
          Length = 156687

 Score =  204 bits (103), Expect = 2e-49
 Identities = 178/203 (87%)
 Strand = Plus / Plus

                                                                         
Query: 346   tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
             |||| ||| |||| |||||||||||| ||||| || || || |||| ||| ||||| || 
Sbjct: 81010 tgtaaaaagggaataaataaatcaattaaatttcgggatgcttcatgaagtgcttctttc 81069

                                                                         
Query: 406   ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
             || ||||||||||| || ||||||||||| |||||||||||||| ||||||||||| |||
Sbjct: 81070 ggagttaaacttccgtttgtccatatttcaagaaaaagtatctcttgtttttcattccca 81129

                                                                         
Query: 466   ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
             |||||| |||||  |||||||| |||| | ||||||||||||||||||||||||||||||
Sbjct: 81130 ttcccataagaatgaatactatgattcgcgtttcgaacaggcatgaatacagcatctata 81189

                                    
Query: 526   ggataacttccatcttgatagtt 548
             |||||||||||||||||| ||||
Sbjct: 81190 ggataacttccatcttgaaagtt 81212



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 121/148 (81%)
 Strand = Plus / Plus

                                                                         
Query: 77    atatatgttttctatcttccatacgaaaactgtcaattctcataagatcttcttcagtct 136
             |||| |||||| |||||||  ||||||||   |||||| |||||||||||||||   | |
Sbjct: 80741 atatctgttttatatcttcgctacgaaaatgttcaattttcataagatcttcttggctgt 80800

                                                                         
Query: 137   tactcaaaaggtccaatagtgtatgtatattggccctttttagacaattatatgttctag 196
             || ||||||||||||||| ||||| |||||||| | |||| || ||||||||  | || |
Sbjct: 80801 tattcaaaaggtccaataatgtatatatattggacattttgaggcaattatagatcctgg 80860

                                         
Query: 197   aagttaattctaattgatcaataaaaat 224
             |||  |||||| |||| |||||||||||
Sbjct: 80861 aaggcaattctgattggtcaataaaaat 80888

---

>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome
          Length = 155298

 Score =  204 bits (103), Expect = 2e-49
 Identities = 178/203 (87%)
 Strand = Plus / Plus

                                                                         
Query: 346   tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
             |||| ||| |||| |||||||||||| ||||| || || || |||| ||| ||||| || 
Sbjct: 80014 tgtaaaaagggaataaataaatcaattaaatttcgggatgcgtcatgaagtgcttctttc 80073

                                                                         
Query: 406   ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
             || |||||||||||||| ||||||||||| | |||||||||||| ||||||||||| |||
Sbjct: 80074 ggagttaaacttccatttgtccatatttcgataaaaagtatctcttgtttttcattccca 80133

                                                                         
Query: 466   ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
             |||||| |||||  |||||||| |||| | ||||||||||||||||||||||||||||||
Sbjct: 80134 ttcccataagaatgaatactatgattcgcgtttcgaacaggcatgaatacagcatctata 80193

                                    
Query: 526   ggataacttccatcttgatagtt 548
             |||||||||||||||||| ||||
Sbjct: 80194 ggataacttccatcttgaaagtt 80216



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 121/148 (81%)
 Strand = Plus / Plus

                                                                         
Query: 77    atatatgttttctatcttccatacgaaaactgtcaattctcataagatcttcttcagtct 136
             |||| |||||| |||||||  ||||||||   |||||| |||||||||||||||   | |
Sbjct: 79745 atatctgttttatatcttcgctacgaaaatgttcaattttcataagatcttcttggctgt 79804

                                                                         
Query: 137   tactcaaaaggtccaatagtgtatgtatattggccctttttagacaattatatgttctag 196
             || ||||||||||||||| ||||| |||||||| | |||| || ||||||||  | || |
Sbjct: 79805 tattcaaaaggtccaataatgtatatatattggacattttgaggcaattatagatcctgg 79864

                                         
Query: 197   aagttaattctaattgatcaataaaaat 224
             |||  |||||| |||| |||||||||||
Sbjct: 79865 aagacaattctgattggtcaataaaaat 79892

---

>gb|AY005806.1| Transformation vector pJYS54, plastid targeting region
          Length = 4304

 Score =  204 bits (103), Expect = 2e-49
 Identities = 178/203 (87%)
 Strand = Plus / Plus

                                                                        
Query: 346  tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
            |||| ||| |||| |||||||||||| ||||| || || || |||| ||| ||||| || 
Sbjct: 2959 tgtaaaaagggaataaataaatcaattaaatttcgggatgcttcatgaagtgcttctttc 3018

                                                                        
Query: 406  ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
            || ||||||||||| || ||||||||||| |||||||||||||| ||||||||||| |||
Sbjct: 3019 ggagttaaacttccgtttgtccatatttcgagaaaaagtatctcttgtttttcattccca 3078

                                                                        
Query: 466  ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
            |||||| |||||  |||||||| |||| | ||||||||||||||||||||||||||||||
Sbjct: 3079 ttcccataagaatgaatactatgattcgcgtttcgaacaggcatgaatacagcatctata 3138

                                   
Query: 526  ggataacttccatcttgatagtt 548
            |||||||||||||||||| ||||
Sbjct: 3139 ggataacttccatcttgaaagtt 3161



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 95/116 (81%)
 Strand = Plus / Plus

                                                                        
Query: 109  tcaattctcataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattg 168
            |||||| |||||||||||||||   | ||| ||||||||||||| | ||||| |||||||
Sbjct: 2722 tcaattttcataagatcttcttggctgttattcaaaaggtccaacaatgtatatatattg 2781

                                                                    
Query: 169  gccctttttagacaattatatgttctagaagttaattctaattgatcaataaaaat 224
            | | |||| || ||||||||  | || ||||  |||||| |||| |||||||||||
Sbjct: 2782 gacattttgaggcaattatagatcctggaaggcaattctgattggtcaataaaaat 2837

---

>gb|AY582139.1| Panax ginseng chloroplast, complete genome
          Length = 156318

 Score =  204 bits (103), Expect = 2e-49
 Identities = 178/203 (87%)
 Strand = Plus / Plus

                                                                         
Query: 346   tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
             |||| ||| |||| |||||||||||||||||| || || || | || ||| ||||| |||
Sbjct: 80197 tgtaaaaagggaataaataaatcaatcaaattccgggaggcttgatgaagtgcttcttta 80256

                                                                         
Query: 406   ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
             || |||||||||||||| ||||||||||| ||||| |||||||| ||||| ||||| |||
Sbjct: 80257 ggagttaaacttccatttgtccatatttcaagaaagagtatctcttgtttctcattccca 80316

                                                                         
Query: 466   ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
             |||||| |||||  |||||||| |||| | ||||||||||||||||||||||||||||||
Sbjct: 80317 ttcccataagaatgaatactatgattcgcgtttcgaacaggcatgaatacagcatctata 80376

                                    
Query: 526   ggataacttccatcttgatagtt 548
             |||||||||||||||||| ||||
Sbjct: 80377 ggataacttccatcttgaaagtt 80399



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 120/148 (81%)
 Strand = Plus / Plus

                                                                         
Query: 41    gtaaatcaattgggagatgcttctctagagtgtcccatatatgttttctatcttccatac 100
             |||||||||||| || |||||| |||||| || || ||||   ||||  |||||| || |
Sbjct: 79892 gtaaatcaattgcgaaatgcttttctagaatgcccaatatcgcttttacatcttctatgc 79951

                                                                         
Query: 101   gaaaactgtcaattctcataagatcttcttcagtcttactcaaaaggtccaatagtgtat 160
             |||||   |||||| ||||||| ||||||| | | ||| ||||||||||||||| |||||
Sbjct: 79952 gaaaatgttcaattttcataaggtcttcttgactgttattcaaaaggtccaataatgtat 80011

                                         
Query: 161   gtatattggccctttttagacaattata 188
              |||||||| |||| | || ||||||||
Sbjct: 80012 atatattggaccttataaggcaattata 80039

---

>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence
          Length = 155941

 Score =  204 bits (103), Expect = 2e-49
 Identities = 178/203 (87%)
 Strand = Plus / Plus

                                                                         
Query: 346   tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
             |||| ||| |||| |||||||||||| ||||| || || || |||| ||| ||||| || 
Sbjct: 80778 tgtaaaaagggaataaataaatcaattaaatttcgggatgcttcatgaagtgcttctttc 80837

                                                                         
Query: 406   ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
             || ||||||||||| || ||||||||||| |||||||||||||| ||||||||||| |||
Sbjct: 80838 ggagttaaacttccgtttgtccatatttcgagaaaaagtatctcttgtttttcattccca 80897

                                                                         
Query: 466   ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
             |||||| |||||  |||||||| |||| | ||||||||||||||||||||||||||||||
Sbjct: 80898 ttcccataagaatgaatactatgattcgcgtttcgaacaggcatgaatacagcatctata 80957

                                    
Query: 526   ggataacttccatcttgatagtt 548
             |||||||||||||||||| ||||
Sbjct: 80958 ggataacttccatcttgaaagtt 80980



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 95/116 (81%)
 Strand = Plus / Plus

                                                                         
Query: 109   tcaattctcataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattg 168
             |||||| |||||||||||||||   | ||| ||||||||||||| | ||||| |||||||
Sbjct: 80541 tcaattttcataagatcttcttggctgttattcaaaaggtccaacaatgtatatatattg 80600

                                                                     
Query: 169   gccctttttagacaattatatgttctagaagttaattctaattgatcaataaaaat 224
             | | |||| || ||||||||  | || ||||  |||||| |||| |||||||||||
Sbjct: 80601 gacattttgaggcaattatagatcctggaaggcaattctgattggtcaataaaaat 80656

---

>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence
          Length = 155745

 Score =  204 bits (103), Expect = 2e-49
 Identities = 178/203 (87%)
 Strand = Plus / Plus

                                                                         
Query: 346   tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
             |||| ||| |||| |||||||||||| ||||| || || || |||| ||| ||||| || 
Sbjct: 80532 tgtaaaaagggaataaataaatcaattaaatttcgggatgcttcatgaagtgcttctttc 80591

                                                                         
Query: 406   ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
             || ||||||||||| || ||||||||||| |||||||||||||| ||||||||||| |||
Sbjct: 80592 ggagttaaacttccgtttgtccatatttcgagaaaaagtatctcttgtttttcattccca 80651

                                                                         
Query: 466   ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
             |||||| |||||  |||||||| |||| | ||||||||||||||||||||||||||||||
Sbjct: 80652 ttcccataagaatgaatactatgattcgcgtttcgaacaggcatgaatacagcatctata 80711

                                    
Query: 526   ggataacttccatcttgatagtt 548
             |||||||||||||||||| ||||
Sbjct: 80712 ggataacttccatcttgaaagtt 80734



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 95/116 (81%)
 Strand = Plus / Plus

                                                                         
Query: 109   tcaattctcataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattg 168
             |||||| |||||||||||||||   | ||| ||||||||||||| | ||||| |||||||
Sbjct: 80295 tcaattttcataagatcttcttggctgttattcaaaaggtccaacaatgtatatatattg 80354

                                                                     
Query: 169   gccctttttagacaattatatgttctagaagttaattctaattgatcaataaaaat 224
             | | |||| || ||||||||  | || ||||  |||||| |||| |||||||||||
Sbjct: 80355 gacattttgaggcaattatagatcctggaaggcaattctgattggtcaataaaaat 80410

---

>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome
          Length = 155312

 Score =  204 bits (103), Expect = 2e-49
 Identities = 178/203 (87%)
 Strand = Plus / Plus

                                                                         
Query: 346   tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
             |||| ||| |||| |||||||||||| ||||| || || || |||| ||| ||||| || 
Sbjct: 80026 tgtaaaaagggaataaataaatcaattaaatttcgggatgcgtcatgaagtgcttctttc 80085

                                                                         
Query: 406   ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
             || |||||||||||||| ||||||||||| | |||||||||||| ||||||||||| |||
Sbjct: 80086 ggagttaaacttccatttgtccatatttcgataaaaagtatctcttgtttttcattccca 80145

                                                                         
Query: 466   ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
             |||||| |||||  |||||||| |||| | ||||||||||||||||||||||||||||||
Sbjct: 80146 ttcccataagaatgaatactatgattcgcgtttcgaacaggcatgaatacagcatctata 80205

                                    
Query: 526   ggataacttccatcttgatagtt 548
             |||||||||||||||||| ||||
Sbjct: 80206 ggataacttccatcttgaaagtt 80228



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 121/148 (81%)
 Strand = Plus / Plus

                                                                         
Query: 77    atatatgttttctatcttccatacgaaaactgtcaattctcataagatcttcttcagtct 136
             |||| |||||| |||||||  ||||||||   |||||| |||||||||||||||   | |
Sbjct: 79757 atatctgttttatatcttcgctacgaaaatgttcaattttcataagatcttcttggctgt 79816

                                                                         
Query: 137   tactcaaaaggtccaatagtgtatgtatattggccctttttagacaattatatgttctag 196
             || ||||||||||||||| ||||| |||||||| | |||| || ||||||||  | || |
Sbjct: 79817 tattcaaaaggtccaataatgtatatatattggacattttgaggcaattatagatcctgg 79876

                                         
Query: 197   aagttaattctaattgatcaataaaaat 224
             |||  |||||| |||| |||||||||||
Sbjct: 79877 aagacaattctgattggtcaataaaaat 79904

---

>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence
          Length = 162686

 Score =  202 bits (102), Expect = 9e-49
 Identities = 180/206 (87%)
 Strand = Plus / Plus

                                                                         
Query: 337   tcctcggcgtgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagc 396
             ||||| || ||||||||||||| ||||||||| ||||||||||| ||||| || ||||| 
Sbjct: 84871 tcctccgcatgtagaaaaggaataaataaatcgatcaaattacgggaagcttcgtaaagt 84930

                                                                         
Query: 397   gcttccttaggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttt 456
             || || ||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||
Sbjct: 84931 gcctctttaggagttaaacttccatttgtccatatctctagaaaaagtatctcttgtttt 84990

                                                                         
Query: 457   tcatttccattcccacaagaaaaaatactataattcacatttcgaacaggcatgaataca 516
             |||||  |||| ||| || |   ||||||||||||| ||||||||||||||||  |||||
Sbjct: 84991 tcattctcatttccataacattgaatactataattcgcatttcgaacaggcatagataca 85050

                                       
Query: 517   gcatctataggataacttccatcttg 542
             |||||||||||||||||| |||||||
Sbjct: 85051 gcatctataggataacttgcatcttg 85076



 Score =  109 bits (55), Expect = 1e-20
 Identities = 106/123 (86%)
 Strand = Plus / Plus

                                                                         
Query: 119   taagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggcccttttta 178
             |||||||||||| | ||||||||||||||||||||| |||||| ||||||| |||||| |
Sbjct: 84647 taagatcttcttgactcttactcaaaaggtccaataatgtatggatattggaccttttga 84706

                                                                         
Query: 179   gacaattatatgttctagaagttaattctaattgatcaataaaaatacaattcaatggaa 238
             | || ||||| || || | || |||||||||||| |||||||||||||  ||||||| ||
Sbjct: 84707 ggcagttataggtcctgggagataattctaattggtcaataaaaatacgtttcaatgcaa 84766

                
Query: 239   ttc 241
             |||
Sbjct: 84767 ttc 84769

---

>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome
          Length = 150725

 Score =  196 bits (99), Expect = 6e-47
 Identities = 177/203 (87%)
 Strand = Plus / Plus

                                                                         
Query: 346   tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
             |||||||||||||  ||||||||||| ||||| ||||| || |||||||| ||||| || 
Sbjct: 76770 tgtagaaaaggaattaataaatcaattaaattccgagaggcttcataaagtgcttctttc 76829

                                                                         
Query: 406   ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
             || |||||||| ||||| ||||||||||| |||||||||||||| ||||||||||| |||
Sbjct: 76830 ggagttaaactaccatttgtccatatttcgagaaaaagtatctcttgtttttcattccca 76889

                                                                         
Query: 466   ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
             || ||| |||||  |||||||| |||||| || |||||||||||||||| ||||||||||
Sbjct: 76890 tttccataagaatgaatactatgattcacgttccgaacaggcatgaatagagcatctata 76949

                                    
Query: 526   ggataacttccatcttgatagtt 548
             ||| ||||||| |||||| ||||
Sbjct: 76950 ggaaaacttccgtcttgaaagtt 76972



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 88/107 (82%)
 Strand = Plus / Plus

                                                                         
Query: 118   ataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggcccttttt 177
             ||||||||||||| | | ||| ||||||||||||||| ||| ||||||||||   |||||
Sbjct: 76545 ataagatcttcttgactgttattcaaaaggtccaataatgtgtgtatattggattttttt 76604

                                                            
Query: 178   agacaattatatgttctagaagttaattctaattgatcaataaaaat 224
             || ||||| ||  | ||||  |  ||||||||||| |||||||||||
Sbjct: 76605 aggcaattgtagatcctaggtggcaattctaattggtcaataaaaat 76651

---

>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome
          Length = 155460

 Score =  196 bits (99), Expect = 6e-47
 Identities = 177/203 (87%)
 Strand = Plus / Plus

                                                                         
Query: 346   tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
             |||| ||| |||| |||||||||||| ||||| || || || |||| ||| ||||| || 
Sbjct: 80168 tgtaaaaagggaataaataaatcaattaaatttcgggatgcgtcatgaagtgcttctttc 80227

                                                                         
Query: 406   ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
             || ||||||||||| || ||||||||||| | |||||||||||| ||||||||||| |||
Sbjct: 80228 ggagttaaacttccgtttgtccatatttcgataaaaagtatctcttgtttttcattccca 80287

                                                                         
Query: 466   ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
             |||||| |||||  |||||||| |||| | ||||||||||||||||||||||||||||||
Sbjct: 80288 ttcccataagaatgaatactatgattcgcgtttcgaacaggcatgaatacagcatctata 80347

                                    
Query: 526   ggataacttccatcttgatagtt 548
             |||||||||||||||||| ||||
Sbjct: 80348 ggataacttccatcttgaaagtt 80370



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 126/154 (81%)
 Strand = Plus / Plus

                                                                         
Query: 71    tgtcccatatatgttttctatcttccatacgaaaactgtcaattctcataagatcttctt 130
             ||||| |||| |||||| |||||||  ||||||||   |||||| |||||||||||||||
Sbjct: 79893 tgtccaatatctgttttatatcttcgctacgaaaatgttcaattttcataagatcttctt 79952

                                                                         
Query: 131   cagtcttactcaaaaggtccaatagtgtatgtatattggccctttttagacaattatatg 190
                | ||| ||||||||||||||| ||||| |||||||| | |||| || ||||||||  
Sbjct: 79953 ggctgttattcaaaaggtccaataatgtatatatattggacattttgaggcaattataga 80012

                                               
Query: 191   ttctagaagttaattctaattgatcaataaaaat 224
             | || ||||  |||||| |||| |||||||||||
Sbjct: 80013 tcctggaagacaattctgattggtcaataaaaat 80046

---

>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome
          Length = 155461

 Score =  196 bits (99), Expect = 6e-47
 Identities = 177/203 (87%)
 Strand = Plus / Plus

                                                                         
Query: 346   tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
             |||| ||| |||| |||||||||||| ||||| || || || |||| ||| ||||| || 
Sbjct: 80165 tgtaaaaagggaataaataaatcaattaaatttcgggatgcgtcatgaagtgcttctttc 80224

                                                                         
Query: 406   ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
             || ||||||||||| || ||||||||||| | |||||||||||| ||||||||||| |||
Sbjct: 80225 ggagttaaacttccgtttgtccatatttcgataaaaagtatctcttgtttttcattccca 80284

                                                                         
Query: 466   ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
             |||||| |||||  |||||||| |||| | ||||||||||||||||||||||||||||||
Sbjct: 80285 ttcccataagaatgaatactatgattcgcgtttcgaacaggcatgaatacagcatctata 80344

                                    
Query: 526   ggataacttccatcttgatagtt 548
             |||||||||||||||||| ||||
Sbjct: 80345 ggataacttccatcttgaaagtt 80367



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 126/154 (81%)
 Strand = Plus / Plus

                                                                         
Query: 71    tgtcccatatatgttttctatcttccatacgaaaactgtcaattctcataagatcttctt 130
             ||||| |||| |||||| |||||||  ||||||||   |||||| |||||||||||||||
Sbjct: 79890 tgtccaatatctgttttatatcttcgctacgaaaatgttcaattttcataagatcttctt 79949

                                                                         
Query: 131   cagtcttactcaaaaggtccaatagtgtatgtatattggccctttttagacaattatatg 190
                | ||| ||||||||||||||| ||||| |||||||| | |||| || ||||||||  
Sbjct: 79950 ggctgttattcaaaaggtccaataatgtatatatattggacattttgaggcaattataga 80009

                                               
Query: 191   ttctagaagttaattctaattgatcaataaaaat 224
             | || ||||  |||||| |||| |||||||||||
Sbjct: 80010 tcctggaagacaattctgattggtcaataaaaat 80043

---

>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome
          Length = 155371

 Score =  196 bits (99), Expect = 6e-47
 Identities = 177/203 (87%)
 Strand = Plus / Plus

                                                                         
Query: 346   tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
             |||| ||| |||| |||||||||||| ||||| || || || |||| ||| ||||| || 
Sbjct: 80065 tgtaaaaagggaataaataaatcaattaaatttcgggatgcgtcatgaagtgcttctttc 80124

                                                                         
Query: 406   ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
             || |||||||||||||| ||||||||||| | ||| |||||||| ||||||||||| |||
Sbjct: 80125 ggagttaaacttccatttgtccatatttcgataaacagtatctcttgtttttcattccca 80184

                                                                         
Query: 466   ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
             |||||| |||||  |||||||| |||| | ||||||||||||||||||||||||||||||
Sbjct: 80185 ttcccataagaatgaatactatgattcgcgtttcgaacaggcatgaatacagcatctata 80244

                                    
Query: 526   ggataacttccatcttgatagtt 548
             |||||||||||||||||| ||||
Sbjct: 80245 ggataacttccatcttgaaagtt 80267



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 121/148 (81%)
 Strand = Plus / Plus

                                                                         
Query: 77    atatatgttttctatcttccatacgaaaactgtcaattctcataagatcttcttcagtct 136
             |||| |||||| |||||||  ||||||||   |||||| |||||||||||||||   | |
Sbjct: 79796 atatctgttttatatcttcgctacgaaaatgttcaattttcataagatcttcttggctgt 79855

                                                                         
Query: 137   tactcaaaaggtccaatagtgtatgtatattggccctttttagacaattatatgttctag 196
             || ||||||||||||||| ||||| |||||||| | |||| || ||||||||  | || |
Sbjct: 79856 tattcaaaaggtccaataatgtatatatattggacattttgaggcaattatagatcctgg 79915

                                         
Query: 197   aagttaattctaattgatcaataaaaat 224
             |||  |||||| |||| |||||||||||
Sbjct: 79916 aagacaattctgattggtcaataaaaat 79943

---

>emb|AJ970307.1| Cucumis sativus chloroplast complete genome
          Length = 155293

 Score =  194 bits (98), Expect = 2e-46
 Identities = 173/198 (87%)
 Strand = Plus / Plus

                                                                         
Query: 346   tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
             |||| |||||||| |||||||||||||||||| ||||| || |||| ||| ||||| |||
Sbjct: 80499 tgtaaaaaaggaataaataaatcaatcaaattccgagaggcttcatgaagtgcttcttta 80558

                                                                         
Query: 406   ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
             || |||||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||
Sbjct: 80559 ggagttaaacttccattggtccatatttcgagaaaaagtatctcttgtttttcattccca 80618

                                                                         
Query: 466   ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
             ||  || |||||   ||||||| ||| |||||||||||||||||||||| |||||| |||
Sbjct: 80619 tttacataagaatgtatactatgattaacatttcgaacaggcatgaatatagcatccata 80678

                               
Query: 526   ggataacttccatcttga 543
             ||||||||| | ||||||
Sbjct: 80679 ggataacttgcgtcttga 80696



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                         
Query: 140   tcaaaaggtccaatagtgtatgtatattggccctttttagacaattatatgttctagaag 199
             |||||||||| |||| |||||||||||||  |||||| || ||||||||  | |||| ||
Sbjct: 80287 tcaaaaggtcaaataatgtatgtatattgcaccttttgaggcaattatagatcctaggag 80346

                                       
Query: 200   ttaattctaattgatcaataaaaata 225
               |||||| |||| ||||||||||||
Sbjct: 80347 gcaattctgattggtcaataaaaata 80372

---

>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome
          Length = 155527

 Score =  194 bits (98), Expect = 2e-46
 Identities = 173/198 (87%)
 Strand = Plus / Plus

                                                                         
Query: 346   tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
             |||| |||||||| |||||||||||||||||| ||||| || |||| ||| ||||| |||
Sbjct: 80726 tgtaaaaaaggaataaataaatcaatcaaattccgagaggcttcatgaagtgcttcttta 80785

                                                                         
Query: 406   ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
             || |||||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||
Sbjct: 80786 ggagttaaacttccattggtccatatttcgagaaaaagtatctcttgtttttcattccca 80845

                                                                         
Query: 466   ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
             ||  || |||||   ||||||| ||| |||||||||||||||||||||| |||||| |||
Sbjct: 80846 tttacataagaatgtatactatgattaacatttcgaacaggcatgaatatagcatccata 80905

                               
Query: 526   ggataacttccatcttga 543
             ||||||||| | ||||||
Sbjct: 80906 ggataacttgcgtcttga 80923



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                         
Query: 140   tcaaaaggtccaatagtgtatgtatattggccctttttagacaattatatgttctagaag 199
             |||||||||| |||| |||||||||||||  |||||| || ||||||||  | |||| ||
Sbjct: 80514 tcaaaaggtcaaataatgtatgtatattgcaccttttgaggcaattatagatcctaggag 80573

                                       
Query: 200   ttaattctaattgatcaataaaaata 225
               |||||| |||| ||||||||||||
Sbjct: 80574 gcaattctgattggtcaataaaaata 80599

---

>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome
          Length = 150519

 Score =  194 bits (98), Expect = 2e-46
 Identities = 173/198 (87%)
 Strand = Plus / Plus

                                                                         
Query: 346   tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
             |||| |||||||| |||||||||||||||||| || || || ||||||||||||||||||
Sbjct: 75929 tgtaaaaaaggaataaataaatcaatcaaatttcgggaggcttcataaagcgcttcctta 75988

                                                                         
Query: 406   ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
             || |||| ||||||||| ||||||||||| ||||| || ||||| ||||||||||| |||
Sbjct: 75989 ggagttagacttccatttgtccatatttcgagaaagaggatctcttgtttttcattacca 76048

                                                                         
Query: 466   ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
             ||| |  |||||  |||||||| |||  ||||||||||||||||||||| ||||||||||
Sbjct: 76049 ttcacgtaagaatgaatactatgatttgcatttcgaacaggcatgaatatagcatctata 76108

                               
Query: 526   ggataacttccatcttga 543
               ||||||||||||||||
Sbjct: 76109 ttataacttccatcttga 76126



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                         
Query: 109   tcaattctcataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattg 168
             |||||| ||||||| ||||| | | ||||| ||||||| |||||||  ||||||||||||
Sbjct: 75686 tcaattttcataaggtcttccttactcttagtcaaaagttccaataaggtatgtatattg 75745

                                 
Query: 169   gccctttttagacaattata 188
             | | |||| |||||||||||
Sbjct: 75746 gactttttgagacaattata 75765

---

>emb|X03496.1|CHSOINFA Spinach plastid genes infA, rps 11 and rpoA for initiation factor
            IF-1, ribosomal protein S11 and RNA polymerase alpha
            subunit
          Length = 2500

 Score =  188 bits (95), Expect = 1e-44
 Identities = 176/203 (86%)
 Strand = Plus / Minus

                                                                        
Query: 346  tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
            ||||| |||||||  ||||||||||| ||||| ||||| || |||||||| ||||| || 
Sbjct: 2070 tgtaggaaaggaattaataaatcaattaaattccgagaggcttcataaagtgcttctttc 2011

                                                                        
Query: 406  ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
            || |||||||| ||||| ||||||||||| |||||||||||||| ||||||||||| |||
Sbjct: 2010 ggagttaaactaccatttgtccatatttcgagaaaaagtatctcttgtttttcattccca 1951

                                                                        
Query: 466  ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
            || ||| |||||  |||||||| |||||| || |||||||||||||||| ||||||||||
Sbjct: 1950 tttccataagaatgaatactatgattcacgttccgaacaggcatgaatagagcatctata 1891

                                   
Query: 526  ggataacttccatcttgatagtt 548
            ||| ||||||| |||||| ||||
Sbjct: 1890 ggaaaacttccgtcttgaaagtt 1868



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                        
Query: 118  ataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggcccttttt 177
            ||||||||||||| | | ||| ||||||||||||||| ||| ||||||||||   |||||
Sbjct: 2295 ataagatcttcttgactgttattcaaaaggtccaataatgtgtgtatattggattttttt 2236

                                                           
Query: 178  agacaattatatgttctagaagttaattctaattgatcaataaaaat 224
            || ||||| ||  | ||||  |  ||||||||||| |||||||||||
Sbjct: 2235 aggcaattgtagatcctaggtggcaattctaattggtcaataaaaat 2189

---

>gb|AF030983.1|AF030983 Lathraea clandestina ribosomal protein S11 (rps11) gene, partial
           cds; rpoA pseudogene, complete sequence; and cytochrome
           B6-F complex subunit 4 (petD) gene, partial cds,
           chloroplast genes for chloroplast products
          Length = 1210

 Score =  186 bits (94), Expect = 6e-44
 Identities = 172/198 (86%)
 Strand = Plus / Minus

                                                                       
Query: 346 tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
           |||| ||| |||| |||||||||||||||||| || || || |||| ||| ||||| || 
Sbjct: 818 tgtaaaaagggaataaataaatcaatcaaattccgggaggcttcatgaagtgcttctttc 759

                                                                       
Query: 406 ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
           || |||||||| || || ||||||||||| ||||| |||||||| ||||||||||| |||
Sbjct: 758 ggagttaaactcccgtttgtccatatttcgagaaacagtatctcttgtttttcattccca 699

                                                                       
Query: 466 ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
           |||||| | |||  |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 698 ttcccataggaatgaatactatgattcacatttcgaacaggcatgaatacagcatctata 639

                             
Query: 526 ggataacttccatcttga 543
           |||||||| || ||||||
Sbjct: 638 ggataactcccctcttga 621



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 109  tcaattctcataagatcttcttcagtcttactcaaaaggtccaat 153
            |||||| ||||||||||||||| | | ||| ||||||||||||||
Sbjct: 1063 tcaattttcataagatcttcttgactgttattcaaaaggtccaat 1019

---

>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence
          Length = 124033

 Score =  186 bits (94), Expect = 6e-44
 Identities = 172/198 (86%)
 Strand = Plus / Minus

                                                                         
Query: 346   tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
             |||| |||||||| |||||||||||||||||| || || || |||||||| ||||| |||
Sbjct: 48192 tgtaaaaaaggaataaataaatcaatcaaattccgggaggcttcataaagtgcttcttta 48133

                                                                         
Query: 406   ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
             || |||||||||||||| ||||||||||| ||||| |||||||| ||||| ||||| |||
Sbjct: 48132 ggagttaaacttccatttgtccatatttcgagaaagagtatctcttgtttctcattacca 48073

                                                                         
Query: 466   ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
             ||| || |||||  |||||||| |||  |||||| ||||||||| ||||| |||||||||
Sbjct: 48072 ttcacataagaatgaatactatgatttgcatttctaacaggcataaatactgcatctata 48013

                               
Query: 526   ggataacttccatcttga 543
             | ||||||||||||||||
Sbjct: 48012 gtataacttccatcttga 47995



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 98/116 (84%)
 Strand = Plus / Minus

                                                                         
Query: 109   tcaattctcataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattg 168
             |||||| ||||||| ||||||| | ||||| ||||||| ||||||| |||||||||||||
Sbjct: 48435 tcaattttcataaggtcttcttgactcttattcaaaagttccaataatgtatgtatattg 48376

                                                                     
Query: 169   gccctttttagacaattatatgttctagaagttaattctaattgatcaataaaaat 224
             | | |||| |||||||||||  | || | ||  ||||||||||| |||||||||||
Sbjct: 48375 gactttttaagacaattatagatcctgggagacaattctaattggtcaataaaaat 48320

---

>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence,
             strain:Columbia
          Length = 154478

 Score =  186 bits (94), Expect = 6e-44
 Identities = 166/190 (87%)
 Strand = Plus / Plus

                                                                         
Query: 346   tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
             ||||||||||||| |||||||| ||||||||| || || || | || ||| ||||| |||
Sbjct: 78199 tgtagaaaaggaataaataaattaatcaaattccgggaggcttgatgaagtgcttcttta 78258

                                                                         
Query: 406   ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
             || |||||||||||||| |||||||||||||||||||| ||||| ||||||||||| |||
Sbjct: 78259 ggagttaaacttccatttgtccatatttctagaaaaagaatctcttgtttttcattccca 78318

                                                                         
Query: 466   ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
             |||||| |||||  |||||||| |||  |||||  ||||||||||||||||||||| |||
Sbjct: 78319 ttcccataagaatgaatactatgattggcattttcaacaggcatgaatacagcatcgata 78378

                       
Query: 526   ggataacttc 535
             ||||||||||
Sbjct: 78379 ggataacttc 78388



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 97/117 (82%)
 Strand = Plus / Plus

                                                                         
Query: 109   tcaattctcataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattg 168
             |||||| | ||||| ||||||| | | ||| ||||||||||||||| |||||||||||||
Sbjct: 77956 tcaattttgataaggtcttcttgactgttattcaaaaggtccaataatgtatgtatattg 78015

                                                                      
Query: 169   gccctttttagacaattatatgttctagaagttaattctaattgatcaataaaaata 225
             |   |||| |||||||| ||  |||| | ||  ||||||||||| ||||||||||||
Sbjct: 78016 gattttttgagacaattgtagattctgggaggcaattctaattggtcaataaaaata 78072

---

>gb|AF536226.1| Vigna angularis chloroplast S10A operon, partial sequence
          Length = 6285

 Score =  174 bits (88), Expect = 2e-40
 Identities = 184/216 (85%)
 Strand = Plus / Minus

                                                                        
Query: 333  ctcttcctcggcgtgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcata 392
            |||||| || ||||||| ||| ||||  |||||||||||||||||  | || || |||||
Sbjct: 5729 ctcttcttctgcgtgtaaaaagggaatgaataaatcaatcaaattttgggaggcttcata 5670

                                                                        
Query: 393  aagcgcttccttaggggttaaacttccattagtccatatttctagaaaaagtatctcgtg 452
            ||| ||||||||||| ||||||||||| || |||||||| || ||||||||||| || ||
Sbjct: 5669 aagggcttccttaggagttaaacttccgtttgtccatatctcgagaaaaagtatttcttg 5610

                                                                        
Query: 453  tttttcatttccattcccacaagaaaaaatactataattcacatttcgaacaggcatgaa 512
            ||||||||| |||||  || |||||  |||||||||||| ||||||||||||||||||||
Sbjct: 5609 tttttcattcccattgacataagaatgaatactataatttacatttcgaacaggcatgaa 5550

                                                
Query: 513  tacagcatctataggataacttccatcttgatagtt 548
            |  ||||||||||  ||||||||| |||||| ||||
Sbjct: 5549 tctagcatctatatcataacttccgtcttgaaagtt 5514



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 80/96 (83%)
 Strand = Plus / Minus

                                                                        
Query: 140  tcaaaaggtccaatagtgtatgtatattggccctttttagacaattatatgttctagaag 199
            ||||||| || |||| |||||| |||||||  ||||| |||||||||||  | || | ||
Sbjct: 5928 tcaaaagttctaataatgtatgaatattggatcttttgagacaattatagatcctgggag 5869

                                                
Query: 200  ttaattctaattgatcaataaaaatacaattcaatg 235
             |||||||||||| |||||||||||| | |||||||
Sbjct: 5868 gtaattctaattggtcaataaaaatagatttcaatg 5833

---

>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome
          Length = 152772

 Score =  151 bits (76), Expect = 3e-33
 Identities = 156/183 (85%), Gaps = 6/183 (3%)
 Strand = Plus / Plus

                                                                         
Query: 361   aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
             ||||||||||||||||| || || || |||||||| ||||| ||||| ||||||||||||
Sbjct: 78173 aataaatcaatcaaattccgggaggcttcataaagtgcttctttaggagttaaacttcca 78232

                                                                         
Query: 421   ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
             || ||||||||||| ||||| |||||||| |  ||  ||||| |||      |||||  |
Sbjct: 78233 tttgtccatatttcgagaaatagtatctctttgttaccattttcat------aagaatga 78286

                                                                         
Query: 481   atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
             ||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 78287 atactatgattcgcatttcgaacaggcatgaatacaggatctataggataacttccatct 78346

                
Query: 541   tga 543
             |||
Sbjct: 78347 tga 78349



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 90/109 (82%)
 Strand = Plus / Plus

                                                                         
Query: 116   tcataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggcccttt 175
             ||||||||||||||| | | ||| ||||||||||||| | ||||| |||||||| |||||
Sbjct: 77928 tcataagatcttcttgactgttattcaaaaggtccaacaatgtatatatattggaccttt 77987

                                                              
Query: 176   ttagacaattatatgttctagaagttaattctaattgatcaataaaaat 224
             | || ||||||||  | || | ||  |||||| |||| |||||||||||
Sbjct: 77988 tgaggcaattatagatcctgggaggcaattctgattggtcaataaaaat 78036

---

>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome
          Length = 152765

 Score =  151 bits (76), Expect = 3e-33
 Identities = 156/183 (85%), Gaps = 6/183 (3%)
 Strand = Plus / Plus

                                                                         
Query: 361   aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
             ||||||||||||||||| || || || |||||||| ||||| ||||| ||||||||||||
Sbjct: 78171 aataaatcaatcaaattccgggaggcttcataaagtgcttctttaggagttaaacttcca 78230

                                                                         
Query: 421   ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
             || ||||||||||| ||||| |||||||| |  ||  ||||| |||      |||||  |
Sbjct: 78231 tttgtccatatttcgagaaatagtatctctttgttaccattttcat------aagaatga 78284

                                                                         
Query: 481   atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
             ||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 78285 atactatgattcgcatttcgaacaggcatgaatacaggatctataggataacttccatct 78344

                
Query: 541   tga 543
             |||
Sbjct: 78345 tga 78347



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 90/109 (82%)
 Strand = Plus / Plus

                                                                         
Query: 116   tcataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggcccttt 175
             ||||||||||||||| | | ||| ||||||||||||| | ||||| |||||||| |||||
Sbjct: 77926 tcataagatcttcttgactgttattcaaaaggtccaacaatgtatatatattggaccttt 77985

                                                              
Query: 176   ttagacaattatatgttctagaagttaattctaattgatcaataaaaat 224
             | || ||||||||  | || | ||  |||||| |||| |||||||||||
Sbjct: 77986 tgaggcaattatagatcctgggaggcaattctgattggtcaataaaaat 78034

---

>gb|AY818944.1| Plantago rugelii RNA polymerase alpha subunit (rpoA) gene, partial
           cds; chloroplast
          Length = 924

 Score =  149 bits (75), Expect = 1e-32
 Identities = 167/198 (84%), Gaps = 6/198 (3%)
 Strand = Plus / Minus

                                                                       
Query: 346 tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
           |||| ||| |||| |||||||||||||||||| ||||| || |||| ||| ||||| || 
Sbjct: 641 tgtaaaaagggaataaataaatcaatcaaattccgagaggcttcatgaagtgcttctttt 582

                                                                       
Query: 406 ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
           || |||||||| ||||| ||||| ||||| ||||| ||||| || ||||||||||| |||
Sbjct: 581 ggagttaaactcccatttgtccagatttcgagaaagagtatttcttgtttttcattccca 522

                                                                       
Query: 466 ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
           |      | |||  |||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 521 t------aggaatgaatactatgattcacatttcgaacaggcatgaagacagcatctata 468

                             
Query: 526 ggataacttccatcttga 543
           |||||||||| |||||||
Sbjct: 467 ggataacttctatcttga 450



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 88/109 (80%)
 Strand = Plus / Minus

                                                                       
Query: 116 tcataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggcccttt 175
           ||||||||||||||| | ||||| |||| | ||| |||| ||||| ||| |||| | |||
Sbjct: 871 tcataagatcttcttgactcttagtcaagaagtcaaataatgtatatatgttggactttt 812

                                                            
Query: 176 ttagacaattatatgttctagaagttaattctaattgatcaataaaaat 224
           | || ||||||||   ||| | || |||||| ||||| |||||||||||
Sbjct: 811 tgaggcaattataaactctgggagataattcaaattggtcaataaaaat 763

---

>gb|AY936353.1| Cuscuta japonica Rps11 (rps11) gene, partial cds; RpoA (rpoA) gene,
           complete cds; and PetD (petD) gene, partial cds;
           chloroplast
          Length = 1359

 Score =  145 bits (73), Expect = 2e-31
 Identities = 165/196 (84%), Gaps = 6/196 (3%)
 Strand = Plus / Minus

                                                                       
Query: 346 tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
           |||| ||| |||| |||||||||||||||||| || || || |||| ||| ||||| || 
Sbjct: 765 tgtaaaaagggaataaataaatcaatcaaatttcgggaggcttcatgaagtgcttctttc 706

                                                                       
Query: 406 ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
           || ||||||||||| || ||||||||||| |||||||||||||| ||||| |      ||
Sbjct: 705 ggagttaaacttccgtttgtccatatttcgagaaaaagtatctcttgtttct------ca 652

                                                                       
Query: 466 ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
           |||||| | |||  |||||||| |||| ||||| |||| |||||||||||||||||||||
Sbjct: 651 ttcccatacgaatgaatactatgattcgcattttgaaccggcatgaatacagcatctata 592

                           
Query: 526 ggataacttccatctt 541
           ||||||||||||||||
Sbjct: 591 ggataacttccatctt 576

---

>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome
          Length = 151104

 Score =  135 bits (68), Expect = 2e-28
 Identities = 154/183 (84%), Gaps = 6/183 (3%)
 Strand = Plus / Plus

                                                                         
Query: 361   aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
             ||||||||||||||||| || || || || | ||| ||||| ||||| ||||||||||||
Sbjct: 77600 aataaatcaatcaaattccgggaggcttcgtgaagtgcttctttaggagttaaacttcca 77659

                                                                         
Query: 421   ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
             || ||||||||||| ||||| |||||||| |  ||  ||||| |||      |||||  |
Sbjct: 77660 tttgtccatatttcgagaaatagtatctctttgttaccattttcat------aagaatga 77713

                                                                         
Query: 481   atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
             ||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 77714 atactatgattcgcatttcgaacaggcatgaatacaggatctataggataacttccatct 77773

                
Query: 541   tga 543
             |||
Sbjct: 77774 tga 77776



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 91/109 (83%)
 Strand = Plus / Plus

                                                                         
Query: 116   tcataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattggcccttt 175
             ||||||||||||||| | | ||| ||||||||||||||| ||||| ||| |||| |||||
Sbjct: 77355 tcataagatcttcttgactgttattcaaaaggtccaataatgtatatatgttggaccttt 77414

                                                              
Query: 176   ttagacaattatatgttctagaagttaattctaattgatcaataaaaat 224
             | || ||||||||  |||| | ||  |||||| |||| |||||||||||
Sbjct: 77415 tgaggcaattatagattctgggaggcaattctgattggtcaataaaaat 77463

---

>emb|AM040152.1| Chrysanthemum x morifolium chloroplast rpoA gene for DNA-directed
           RNA polymerase alpha chain
          Length = 1008

 Score =  135 bits (68), Expect = 2e-28
 Identities = 154/183 (84%), Gaps = 6/183 (3%)
 Strand = Plus / Minus

                                                                       
Query: 361 aataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcca 420
           ||||||||||||||||| || || || || | ||| ||||| ||||| ||||||||||||
Sbjct: 671 aataaatcaatcaaattccgggaggcttcgtgaagtgcttctttaggagttaaacttcca 612

                                                                       
Query: 421 ttagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaaa 480
           || ||||||||||| ||||| |||||||| |  ||  ||||| |||      |||||  |
Sbjct: 611 tttgtccatatttcgagaaatagtatctctttgttaccattttcat------aagaatga 558

                                                                       
Query: 481 atactataattcacatttcgaacaggcatgaatacagcatctataggataacttccatct 540
           ||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 557 atactatgattcgcatttcgaacaggcatgaatacaggatctataggataacttccatct 498

              
Query: 541 tga 543
           |||
Sbjct: 497 tga 495



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 69/85 (81%)
 Strand = Plus / Minus

                                                                       
Query: 140 tcaaaaggtccaatagtgtatgtatattggccctttttagacaattatatgttctagaag 199
           ||||||||||||| || |||| ||||||||  ||||| || ||||||||  | || | ||
Sbjct: 892 tcaaaaggtccaacagcgtatatatattggatcttttgaggcaattatagatcctgggag 833

                                    
Query: 200 ttaattctaattgatcaataaaaat 224
             |||||| |||| |||||||||||
Sbjct: 832 gcaattctgattggtcaataaaaat 808

---

>emb|AJ439611.1|CRE439611 Cuscuta reflexa plastid petD gene (partial), rpoA gene and rps11 gene
            (partial)
          Length = 2205

 Score =  121 bits (61), Expect = 3e-24
 Identities = 162/196 (82%), Gaps = 6/196 (3%)
 Strand = Plus / Plus

                                                                        
Query: 346  tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
            |||| ||| |||| |||||||||||||||||| || || || || | ||| ||||| || 
Sbjct: 1393 tgtaaaaagggaataaataaatcaatcaaatttcgggaggcttcgtgaagtgcttctttc 1452

                                                                        
Query: 406  ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
            || ||||||||||| || ||||||||||| ||||||||||| || ||||| ||||| |||
Sbjct: 1453 ggagttaaacttccgtttgtccatatttcgagaaaaagtatttcttgtttctcattccca 1512

                                                                        
Query: 466  ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
            | |      |||  |||||||| |||| |||||||||| ||||||| || ||||||||||
Sbjct: 1513 tac------gaattaatactatgattcgcatttcgaaccggcatgagtaaagcatctata 1566

                            
Query: 526  ggataacttccatctt 541
            ||||||||||||||||
Sbjct: 1567 ggataacttccatctt 1582

---

>emb|X07106.1|CHSOPSBO Spinach plastid psbB operon with genes for 10 kD phosphoprotein
            associated with photosystem II (psbH), apocytochrome b6
            and subunit 4 (petD) of cytochrome b6f complex
          Length = 4336

 Score =  119 bits (60), Expect = 1e-23
 Identities = 122/140 (87%), Gaps = 2/140 (1%)
 Strand = Plus / Plus

                                                                        
Query: 409  gttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttccattc 468
            |||||||| ||||| ||||||||| | |||||| ||||||| ||||||||||| ||||| 
Sbjct: 3856 gttaaactaccatttgtccatatt-cgagaaaa-gtatctcttgtttttcattcccattt 3913

                                                                        
Query: 469  ccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctatagga 528
            ||| |||||  |||||||| |||||| || |||||||||||||||| |||||||||||||
Sbjct: 3914 ccataagaatgaatactatgattcacgttccgaacaggcatgaatagagcatctatagga 3973

                                
Query: 529  taacttccatcttgatagtt 548
             ||||||| |||||| ||||
Sbjct: 3974 aaacttccgtcttgaaagtt 3993

---

>gb|AY886744.1| Oedipodium griffithianum ribosomal protein S11 (rps11) gene,
           partial cds; RNA polymerase alpha subunit (rpoA) gene,
           complete cds; and cytochrome b/f complex subunit IV
           (petD) gene, partial cds; chloroplast
          Length = 1323

 Score =  113 bits (57), Expect = 7e-22
 Identities = 147/177 (83%)
 Strand = Plus / Minus

                                                                       
Query: 352 aaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggtt 411
           ||||||| |||||||||||| | | | ||||||||||||||||| ||||| |||||||| 
Sbjct: 784 aaaggaataaataaatcaattagactgcgagaagcctcataaagtgcttctttaggggta 725

                                                                       
Query: 412 aaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttccattccca 471
           | ||||||||||||||||||||| | ||||||||| || ||| ||| |||| | |   ||
Sbjct: 724 atacttccattagtccatatttcaataaaaagtatttcttgtgttttattttcgtgttca 665

                                                                    
Query: 472 caagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctatagga 528
            |||||  || |||||||||  |||||||||  ||||| |||| |||||||||||||
Sbjct: 664 aaagaatgaacactataatttgcatttcgaattggcataaatatagcatctatagga 608



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 178 agacaattatatgttctagaagttaattctaattgatcaataaa 221
           ||||||||||| | |||||  | |||||||| ||||||||||||
Sbjct: 958 agacaattataagctctagccggtaattctagttgatcaataaa 915

---

>emb|X54751.1|CHTAPSGB Triticum aestivum chloroplast psbH, petB, petD, rpoA genes
          Length = 3240

 Score =  111 bits (56), Expect = 3e-21
 Identities = 70/75 (93%)
 Strand = Plus / Plus

                                                                        
Query: 1    aaaaaantgcaatggctttaaaacgagagtttattcttaagtaaatcaattgggagatgc 60
            |||||| |||||||| ||||||   |||||||||||||||||||||||||||||||||||
Sbjct: 3166 aaaaaattgcaatggatttaaatgcagagtttattcttaagtaaatcaattgggagatgc 3225

                           
Query: 61   ttctctagagtgtcc 75
            |||||||||||||||
Sbjct: 3226 ttctctagagtgtcc 3240

---

>gb|AY886747.1| Polytrichum pallidisetum ribosomal protein S11 (rps11) gene,
           partial cds; RNA polymerase alpha subunit (rpoA) gene,
           complete cds; and cytochrome b/f complex subunit IV
           (petD) gene, partial cds; chloroplast
          Length = 1299

 Score =  109 bits (55), Expect = 1e-20
 Identities = 151/183 (82%)
 Strand = Plus / Minus

                                                                       
Query: 346 tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
           |||| |||||||| |||||||||||| ||| |||| |||||||||||||| ||||| |||
Sbjct: 780 tgtaaaaaaggaataaataaatcaattaaactacgcgaagcctcataaagtgcttcttta 721

                                                                       
Query: 406 ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
           ||||| | ||||||||||||||| ||||| | ||||||||| || ||| ||| |||   |
Sbjct: 720 ggggtaatacttccattagtccaaatttcaataaaaagtatttcttgtattttattatta 661

                                                                       
Query: 466 ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
           ||  || | |||  || |||||||||  |||||||||  ||||| |||| ||||||||||
Sbjct: 660 ttttcaaaggaatgaacactataattagcatttcgaattggcataaatatagcatctata 601

              
Query: 526 gga 528
           |||
Sbjct: 600 gga 598



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 178 agacaattatatgttctagaagttaattctaattgatcaataaaaata 225
           ||||||||||| | ||||| || |||||| ||||||||||||||||||
Sbjct: 942 agacaattataagctctagcaggtaattccaattgatcaataaaaata 895

---

>gb|AY936359.1| Cuscuta europaea Rps11 (rps11) gene, partial cds; RpoA (rpoA) gene,
           complete cds; and PetD (petD) gene, partial cds;
           chloroplast
          Length = 1378

 Score =  105 bits (53), Expect = 2e-19
 Identities = 127/152 (83%), Gaps = 6/152 (3%)
 Strand = Plus / Minus

                                                                       
Query: 388 tcataaagcgcttccttaggggttaaacttccattagtccatatttctagaaaaagtatc 447
           |||| ||| ||||| || || |||||||||||||| ||||||||||| | ||||||||||
Sbjct: 730 tcatgaagtgcttctttkggtgttaaacttccatttgtccatatttccaaaaaaagtatc 671

                                                                       
Query: 448 tcgtgtttttcatttccattcccacaagaaaaaatactataattcacatttcgaacaggc 507
           || |||||||      |||||||| |||||  |||||||| |||  ||||| |||| |||
Sbjct: 670 tcttgttttt------cattcccataagaatgaatactatgatttgcattttgaaccggc 617

                                           
Query: 508 atgaatacagcatctataggataacttccatc 539
           ||||| | ||||||||||||||||||||||||
Sbjct: 616 atgaagagagcatctataggataacttccatc 585

---

>gb|AY886746.1| Dendroligotrichum dendroides ribosomal protein S11 (rps11) gene,
           partial cds; RNA polymerase alpha subunit (rpoA) gene,
           complete cds; and cytochrome b/f complex subunit IV
           (petD) gene, partial cds; chloroplast
          Length = 1247

 Score =  105 bits (53), Expect = 2e-19
 Identities = 89/101 (88%)
 Strand = Plus / Minus

                                                                       
Query: 346 tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
           |||| |||||||| |||||||||||| ||| ||||||||||||||||||| ||||| |||
Sbjct: 741 tgtaaaaaaggaataaataaatcaattaaactacgagaagcctcataaagggcttcttta 682

                                                    
Query: 406 ggggttaaacttccattagtccatatttctagaaaaagtat 446
           || || | ||||||||||||||| ||||| | |||||||||
Sbjct: 681 ggcgtaatacttccattagtccagatttcaataaaaagtat 641



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                           
Query: 178 agacaattatatgttctagaagttaattctaattgatcaataaaaata 225
           ||||||||||| |  |||| || |||||| |||||||| |||||||||
Sbjct: 909 agacaattataagccctagcaggtaattccaattgatcgataaaaata 862

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  103 bits (52), Expect = 7e-19
 Identities = 67/72 (93%)
 Strand = Plus / Minus

                                                                            
Query: 170      ccctttttagacaattatatgttctagaagttaattctaattgatcaataaaaatacaat 229
                ||||||| ||||||||||| ||||||||||  | ||||||||||||||||||||||||||
Sbjct: 19434761 cccttttgagacaattatacgttctagaaggcagttctaattgatcaataaaaatacaat 19434702

                            
Query: 230      tcaatggaattc 241
                ||||||||||||
Sbjct: 19434701 tcaatggaattc 19434690



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 208      aattgatcaataaaaatacaattcaa 233
                ||||||||| ||||||||||||||||
Sbjct: 21353187 aattgatcattaaaaatacaattcaa 21353212

---

>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0476H10
          Length = 151703

 Score =  103 bits (52), Expect = 7e-19
 Identities = 67/72 (93%)
 Strand = Plus / Minus

                                                                         
Query: 170   ccctttttagacaattatatgttctagaagttaattctaattgatcaataaaaatacaat 229
             ||||||| ||||||||||| ||||||||||  | ||||||||||||||||||||||||||
Sbjct: 52288 cccttttgagacaattatacgttctagaaggcagttctaattgatcaataaaaatacaat 52229

                         
Query: 230   tcaatggaattc 241
             ||||||||||||
Sbjct: 52228 tcaatggaattc 52217

---

>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0475F05
          Length = 147522

 Score =  103 bits (52), Expect = 7e-19
 Identities = 67/72 (93%)
 Strand = Plus / Minus

                                                                          
Query: 170    ccctttttagacaattatatgttctagaagttaattctaattgatcaataaaaatacaat 229
              ||||||| ||||||||||| ||||||||||  | ||||||||||||||||||||||||||
Sbjct: 120252 cccttttgagacaattatacgttctagaaggcagttctaattgatcaataaaaatacaat 120193

                          
Query: 230    tcaatggaattc 241
              ||||||||||||
Sbjct: 120192 tcaatggaattc 120181

---

>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC
            transporter, exons 1-22
          Length = 15112

 Score =  103 bits (52), Expect = 7e-19
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                        
Query: 170  ccctttttagacaattatatgttctagaagttaattctaattgatcaataaaaatacaat 229
            ||||||| ||||||||||| ||||||||||  | ||||||||||||||||||||||||||
Sbjct: 5370 cccttttgagacaattatacgttctagaaggcagttctaattgatcaataaaaatacaat 5429

                        
Query: 230  tcaatggaattc 241
            ||||||||||||
Sbjct: 5430 tcaatggaattc 5441

---

>gb|AY911400.1| Polytrichadelphus purpureus RNA polymerase alpha subunit (rpoA)
           gene, partial cds; rpoA-petD intergenic spacer, complete
           sequence; and cytochrome b/f complex subunit IV (petD)
           gene, partial cds; chloroplast
          Length = 692

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                       
Query: 346 tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
           |||| |||||||| |||||||||| | | | ||||||||||||||||||| ||||| |||
Sbjct: 167 tgtaaaaaaggaataaataaatcanttagactacgagaagcctcataaagtgcttcttta 108

                                                    
Query: 406 ggggttaaacttccattagtccatatttctagaaaaagtat 446
           || || | ||||||||||||||||||||| | |||||||||
Sbjct: 107 ggcgtaatacttccattagtccatatttcaataaaaagtat 67



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 178 agacaattatatgttctagaagttaattctaattgatcaataaaaata 225
           ||||||||||| | ||||| || |||||| |||||||| |||||||||
Sbjct: 335 agacaattataagctctagcagataattccaattgatcgataaaaata 288

---

>dbj|AP006175.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
           PAC clone:P0669G04
          Length = 74610

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 86/97 (88%), Gaps = 1/97 (1%)
 Strand = Plus / Minus

                                                                       
Query: 476 aaaaaatactataattcacatttcgaacaggcatgaatacagcatctataggataacttc 535
           |||||| |||||||||||||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 842 aaaaaaaactataattcacatttcgaacatgcatggatacaacatctataggataacttc 783

                                                
Query: 536 catcttgatagttctttctgagttctgtctgatatcc 572
           |||| |||  | ||||||||| ||| || ||||||||
Sbjct: 782 catcgtgagtg-tctttctgacttccgtgtgatatcc 747

---

>dbj|AP006855.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
             fosmid clone:OSJNOa178M01
          Length = 34955

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 86/97 (88%), Gaps = 1/97 (1%)
 Strand = Plus / Minus

                                                                         
Query: 476   aaaaaatactataattcacatttcgaacaggcatgaatacagcatctataggataacttc 535
             |||||| |||||||||||||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 13734 aaaaaaaactataattcacatttcgaacatgcatggatacaacatctataggataacttc 13675

                                                  
Query: 536   catcttgatagttctttctgagttctgtctgatatcc 572
             |||| |||  | ||||||||| ||| || ||||||||
Sbjct: 13674 catcgtgagtg-tctttctgacttccgtgtgatatcc 13639

---

>dbj|AP006755.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
           PAC clone:P0342F04, complete sequence
          Length = 2167

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 86/97 (88%), Gaps = 1/97 (1%)
 Strand = Plus / Minus

                                                                       
Query: 476 aaaaaatactataattcacatttcgaacaggcatgaatacagcatctataggataacttc 535
           |||||| |||||||||||||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 866 aaaaaaaactataattcacatttcgaacatgcatggatacaacatctataggataacttc 807

                                                
Query: 536 catcttgatagttctttctgagttctgtctgatatcc 572
           |||| |||  | ||||||||| ||| || ||||||||
Sbjct: 806 catcgtgagtg-tctttctgacttccgtgtgatatcc 771

---

>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA
          Length = 121024

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                         
Query: 352   aaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggtt 411
             ||||||| |||||||||||| ||||| |||||||| |||||||| ||||| || || || 
Sbjct: 74139 aaaggaataaataaatcaattaaatttcgagaagcttcataaagagcttcttttggagtc 74198

                                                
Query: 412   aaacttccattagtccatatttctagaaaaagtat 446
             |||||||||| |||||| ||||| |||||||||||
Sbjct: 74199 aaacttccatcagtccagatttcaagaaaaagtat 74233



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                              
Query: 173   tttttagacaattatatgttctagaagttaattctaattgatcaataaa 221
             |||| ||||||||||||| ||| | || |||||||| ||||||||||||
Sbjct: 73957 ttttaagacaattatatgctctggcaggtaattctagttgatcaataaa 74005

---

>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome
          Length = 116866

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 141/173 (81%)
 Strand = Plus / Plus

                                                                         
Query: 355   ggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaa 414
             |||| |||||| || |||||||| |||||||| || ||||| || ||| |||| ||||| 
Sbjct: 56323 ggaataaataagtcgatcaaatttcgagaagcttcgtaaagtgcctccctaggagttaac 56382

                                                                         
Query: 415   cttccattagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaa 474
             |  ||||| ||||||||||| || ||||| |  || ||| ||||||||||  ||||| | 
Sbjct: 56383 cccccattcgtccatatttccaggaaaaggacttcttgtatttcatttccgctcccatag 56442

                                                                  
Query: 475   gaaaaaatactataattcacatttcgaacaggcatgaatacagcatctatagg 527
             |||  ||||||||||||| |||  ||||||||||| || ||||||||||||||
Sbjct: 56443 gaatgaatactataattcgcatcgcgaacaggcataaaaacagcatctatagg 56495

---

>ref|XM_476012.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 360

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 56/60 (93%)
 Strand = Plus / Minus

                                                                       
Query: 140 tcaaaaggtccaatagtgtatgtatattggccctttttagacaattatatgttctagaag 199
           |||||||||||||||||| ||| |||||||||||||| ||||||||||| ||||||||||
Sbjct: 360 tcaaaaggtccaatagtgcatggatattggcccttttgagacaattatacgttctagaag 301

---

>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence
          Length = 119707

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 154/191 (80%)
 Strand = Plus / Plus

                                                                         
Query: 355   ggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaa 414
             |||| |||||| || |||||||| |||||||| || ||||| || ||| |||| ||||| 
Sbjct: 58203 ggaataaataagtcgatcaaatttcgagaagcttcgtaaagtgcctccctaggagttaac 58262

                                                                         
Query: 415   cttccattagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaa 474
             |  ||||| ||||||||||| || ||||| |  ||  || ||||||||||  ||||| | 
Sbjct: 58263 cccccattcgtccatatttccaggaaaaggacttctcgtatttcatttccgctcccatag 58322

                                                                         
Query: 475   gaaaaaatactataattcacatttcgaacaggcatgaatacagcatctataggataactt 534
             |||  ||||||||||||| |||  ||||||||||| || ||||||||||||||| || ||
Sbjct: 58323 gaatgaatactataattcgcatcgcgaacaggcataaaaacagcatctataggaaaaatt 58382

                        
Query: 535   ccatcttgata 545
             || || |||||
Sbjct: 58383 ccgtcctgata 58393



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 145   aggtccaatagtgtatgtatattggc 170
             |||||||||| |||||||||||||||
Sbjct: 57993 aggtccaataatgtatgtatattggc 58018

---

>gb|AY886743.1| Buxbaumia aphylla ribosomal protein S11 (rps11) gene, partial cds;
           RNA polymerase alpha subunit (rpoA) gene, complete cds;
           and cytochrome b/f complex subunit IV (petD) gene,
           partial cds; chloroplast
          Length = 1277

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 135/166 (81%)
 Strand = Plus / Minus

                                                                       
Query: 360 aaataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaacttcc 419
           |||||||||||| ||| |||||||||| |||||||| || || ||||| || | ||||||
Sbjct: 747 aaataaatcaattaaactacgagaagcttcataaagtgcgtctttaggtgtaatacttcc 688

                                                                       
Query: 420 attagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaagaaaa 479
           ||||||||||||||| | |||||| || || ||| ||| |||| | ||  |  |||||  
Sbjct: 687 attagtccatatttcaataaaaagcatttcttgtgttttattttcgttttcgaaagaatg 628

                                                         
Query: 480 aatactataattcacatttcgaacaggcatgaatacagcatctata 525
           || |||||||||  |||||||||  ||||| |||| ||||||||||
Sbjct: 627 aacactataatttgcatttcgaatcggcataaatatagcatctata 582

---

>gb|AY884000.1| Takakia lepidozioides ribosomal protein S11 (rps11) gene, partial
           cds; rps11-rpoA intergenic spacer, complete sequence;
           RNA polymerase alpha subunit (rpoA) gene, complete cds;
           rpoA-petD intergenic spacer, complete sequence; and
           cytochrome b/f complex subunit IV (petD) gene, partial
           cds; chloroplast
          Length = 1784

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 156/195 (80%)
 Strand = Plus / Minus

                                                                       
Query: 346 tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
           |||| ||||||||  |||||||  || ||| | |||||||| |||||||| ||||| || 
Sbjct: 740 tgtaaaaaaggaatgaataaatttattaaacttcgagaagcytcataaagtgcttctttg 681

                                                                       
Query: 406 ggggttaaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttcca 465
           || || | ||||||||||||||||||||| ||||||||||| || ||| | || ||||| 
Sbjct: 680 ggagtcacacttccattagtccatatttcaagaaaaagtatttcttgtgtctcgtttccg 621

                                                                       
Query: 466 ttcccacaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatctata 525
           ||  |  |||||  || |||||||||| | ||||||| |||||| || || ||||||  |
Sbjct: 620 ttttcgaaagaatgaacactataattcgcgtttcgaataggcataaacacggcatctgca 561

                          
Query: 526 ggataacttccatct 540
           ||| || ||||||||
Sbjct: 560 ggagaatttccatct 546

---

>gb|DQ069428.1| Ginkgo biloba RNA polymerase alpha chain (rpoA) gene, partial cds;
           chloroplast
          Length = 1011

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 139/172 (80%)
 Strand = Plus / Minus

                                                                       
Query: 351 aaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggt 410
           ||||||||  ||||| ||||||||||| || ||||| || ||||| |||||   ||| | 
Sbjct: 687 aaaaggaatgaataagtcaatcaaatttcgggaagcttcgtaaagtgcttctccaggagc 628

                                                                       
Query: 411 taaacttccattagtccatatttctagaaaaagtatctcgtgtttttcatttccattccc 470
           |||||||||||| |||||||||||   ||||||||| || ||  | ||||| || |||||
Sbjct: 627 taaacttccattcgtccatatttcggaaaaaagtatttcttgcatctcattcccgttccc 568

                                                               
Query: 471 acaagaaaaaatactataattcacatttcgaacaggcatgaatacagcatct 522
           | | |||  ||||||||||||  | ||||||||||||||  |||||||||||
Sbjct: 567 ataggaatgaatactataatttgcgtttcgaacaggcatagatacagcatct 516



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 140 tcaaaaggtccaatagtgtatgtatattggccctttt 176
           |||| |||||| ||| ||||||||||||| |||||||
Sbjct: 898 tcaagaggtccgataatgtatgtatattgaccctttt 862

---

>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1789_C07
          Length = 138944

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 84/98 (85%), Gaps = 1/98 (1%)
 Strand = Plus / Minus

                                                                         
Query: 31    ttattcttaagtaaatcaattgggagatgcttctctagagtgtcccatatatgttttcta 90
             ||||||||| ||||||  ||||||| ||||||||||||| ||| |||||| ||||||| |
Sbjct: 28303 ttattcttaggtaaattcattgggacatgcttctctaga-tgttccatatctgttttcca 28245

                                                   
Query: 91    tcttccatacgaaaactgtcaattctcataagatcttc 128
             ||||  ||| |||||||||| ||||| || ||||||||
Sbjct: 28244 tcttgtatatgaaaactgtcgattcttattagatcttc 28207

---

>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1770_H02
          Length = 170648

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 84/98 (85%), Gaps = 1/98 (1%)
 Strand = Plus / Minus

                                                                          
Query: 31     ttattcttaagtaaatcaattgggagatgcttctctagagtgtcccatatatgttttcta 90
              ||||||||| ||||||  ||||||| ||||||||||||| ||| |||||| ||||||| |
Sbjct: 108332 ttattcttaggtaaattcattgggacatgcttctctaga-tgttccatatctgttttcca 108274

                                                    
Query: 91     tcttccatacgaaaactgtcaattctcataagatcttc 128
              ||||  ||| |||||||||| ||||| || ||||||||
Sbjct: 108273 tcttgtatatgaaaactgtcgattcttattagatcttc 108236

---

>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 159711

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                   
Query: 32    tattcttaagtaaatcaattgggagatgcttctctagagtgtcccatatatgtt 85
             |||||||| ||||||  |||||||||||||||||||||||||||||||| ||||
Sbjct: 39311 tattcttaggtaaattcattgggagatgcttctctagagtgtcccatatctgtt 39364

---

>dbj|AB193121.1| Takakia lepidozioides rps11, rpoA, petD genes for ribosomal protein
           S11, DNA-dependent RNA polymerase alpha subunit,
           cytochrome b/f complex subunit IV, partial and complete
           cds
          Length = 1836

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                       
Query: 346 tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
           |||| ||||||||  |||||||  || ||| | |||||||| |||||||| ||||| || 
Sbjct: 764 tgtaaaaaaggaatgaataaatttattaaacttcgagaagcttcataaagtgcttctttg 705

                                                    
Query: 406 ggggttaaacttccattagtccatatttctagaaaaagtat 446
           || || | ||||||||||||||||||||| |||||||||||
Sbjct: 704 ggagtcacacttccattagtccatatttcaagaaaaagtat 664

---

>gb|AC139344.17| Medicago truncatula clone mth2-34b22, complete sequence
          Length = 129728

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 83/99 (83%)
 Strand = Plus / Plus

                                                                          
Query: 443    gtatctcgtgtttttcatttccattcccacaagaaaaaatactataattcacatttcgaa 502
              ||||||| ||||| ||||| |||||| || |||||  |||||||| |||  |||||| ||
Sbjct: 125596 gtatctcttgtttctcattaccattcacataagaatgaatactatgatttgcatttctaa 125655

                                                     
Query: 503    caggcatgaatacagcatctataggataacttccatctt 541
              | |||||  |||| |||||||||| ||||||||||||||
Sbjct: 125656 ccggcatagatactgcatctatagtataacttccatctt 125694

---

>emb|AJ001024.1|CLPAPETBD Picea abies chloroplast DNA petB and petD genes
          Length = 4707

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 152/191 (79%)
 Strand = Plus / Plus

                                                                        
Query: 355  ggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaa 414
            |||| |||||| || |||||| | |||||||| ||  |||| || ||| |||| ||||| 
Sbjct: 2489 ggaataaataactcgatcaaaattcgagaagcttcggaaagtgcctccctaggagttaac 2548

                                                                        
Query: 415  cttccattagtccatatttctagaaaaagtatctcgtgtttttcatttccattcccacaa 474
            |  ||||| ||||||||||| || ||||| |  ||  || ||||||||||  ||||| | 
Sbjct: 2549 cccccattcgtccatatttccaggaaaaggacttctcgtatttcatttccgctcccatag 2608

                                                                        
Query: 475  gaaaaaatactataattcacatttcgaacaggcatgaatacagcatctataggataactt 534
            |||  ||||||||||||| |||  ||||||||||| || ||||||||||||||| || ||
Sbjct: 2609 gaatgaatactataattcgcatcgcgaacaggcataaaaacagcatctataggaaaaatt 2668

                       
Query: 535  ccatcttgata 545
            || || |||||
Sbjct: 2669 ccgtcctgata 2679

---

>gb|AY885232.1| Sphagnum fimbriatum ribosomal protein S11 (rps11) gene, partial
           cds; rps11-rpoA intergenic spacer, complete sequence;
           RNA polymerase alpha subunit (rpoA) gene, complete cds;
           rpoA-petD intergenic spacer, complete sequence; and
           cytochrome b/f complex subunit IV (petD) gene, partial
           cds; chloroplast
          Length = 1743

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                       
Query: 346 tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
           ||||| ||||||| ||||| |||||| | | | ||||||||||||||||| || || || 
Sbjct: 794 tgtaggaaaggaataaatagatcaattagacttcgagaagcctcataaagtgcctctttg 735

                                                    
Query: 406 ggggttaaacttccattagtccatatttctagaaaaagtat 446
           || || | ||||||||| ||||||||||| | |||||||||
Sbjct: 734 ggagtaacacttccattggtccatatttcaataaaaagtat 694

---

>dbj|AB098237.1| Nicotiana tomentosiformis rpoA gene for RNA polymerase alpha
           subunit, partial cds
          Length = 233

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 95/116 (81%)
 Strand = Plus / Minus

                                                                       
Query: 109 tcaattctcataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattg 168
           |||||| |||||||||||||||   | ||| ||||||||||||| | ||||| |||||||
Sbjct: 194 tcaattttcataagatcttcttggctgttattcaaaaggtccaacaatgtatatatattg 135

                                                                   
Query: 169 gccctttttagacaattatatgttctagaagttaattctaattgatcaataaaaat 224
           | | |||| || ||||||||  | || ||||  |||||| |||| |||||||||||
Sbjct: 134 gacattttgaggcaattatagatcctggaaggcaattctgattggtcaataaaaat 79

---

>dbj|AB098216.1| Nicotiana sylvestris rpoA gene for RNA polymerase alpha subunit,
           partial cds
          Length = 239

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 95/116 (81%)
 Strand = Plus / Minus

                                                                       
Query: 109 tcaattctcataagatcttcttcagtcttactcaaaaggtccaatagtgtatgtatattg 168
           |||||| |||||||||||||||   | ||| ||||||||||||| | ||||| |||||||
Sbjct: 200 tcaattttcataagatcttcttggctgttattcaaaaggtccaacaatgtatatatattg 141

                                                                   
Query: 169 gccctttttagacaattatatgttctagaagttaattctaattgatcaataaaaat 224
           | | |||| || ||||||||  | || ||||  |||||| |||| |||||||||||
Sbjct: 140 gacattttgaggcaattatagatcctggaaggcaattctgattggtcaataaaaat 85

---

>gb|AY886745.1| Andreaea rupestris ribosomal protein S11 (rps11) and RNA polymerase
           alpha subunit (rpoA) genes, partial cds; chloroplast
          Length = 673

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 480 aatactataattcacatttcgaacaggcatgaatacagcatcta 523
           ||||||||||||| ||||||||| |||||| |||||||||||||
Sbjct: 645 aatactataattcgcatttcgaataggcataaatacagcatcta 602

---

>dbj|AB087466.1| Anthoceros formosae chloroplast rpoA mRNA for RNA polymerase alpha
           subunit, complete cds
          Length = 1118

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 86/104 (82%)
 Strand = Plus / Plus

                                                                       
Query: 355 ggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttccttaggggttaaa 414
           |||| |||||||| ||| ||| |  ||||||| |||  ||| ||||| |||||||| | |
Sbjct: 413 ggaataaataaattaattaaactttgagaagcttcacgaagtgcttctttaggggtgaga 472

                                                       
Query: 415 cttccattagtccatatttctagaaaaagtatctcgtgtttttc 458
           |||||||||||||||| ||| | ||||||||| || ||||||||
Sbjct: 473 cttccattagtccatacttcaataaaaagtatttcttgtttttc 516



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 173 tttttagacaattatatgttctagaagttaattctaattgatcaataaa 221
           |||| |||| |||||||| ||| | || |||||||| ||||||||||||
Sbjct: 234 ttttgagaccattatatgctctcgcaggtaattctagttgatcaataaa 282

---

>emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 83
          Length = 197859

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                 
Query: 501    aacaggcatgaatacagcatctataggataacttc 535
              ||||||||||||||||||||| |||||||||||||
Sbjct: 185680 aacaggcatgaatacagcatcgataggataacttc 185646

---

>emb|AL031135.1|ATF8D20 Arabidopsis thaliana DNA chromosome 4, BAC clone F8D20 (ESSAII project)
          Length = 94315

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                
Query: 501   aacaggcatgaatacagcatctataggataacttc 535
             ||||||||||||||||||||| |||||||||||||
Sbjct: 64920 aacaggcatgaatacagcatcgataggataacttc 64886

---

>dbj|AB193122.1| Sphagnum girgensohnii rps11, rpoA, petD genes for ribosomal protein
           S11, DNA-dependent RNA polymerase alpha subunit,
           cytochrome b/f complex subunit IV, partial and complete
           cds
          Length = 1754

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                       
Query: 346 tgtagaaaaggaagaaataaatcaatcaaattacgagaagcctcataaagcgcttcctta 405
           ||||| ||||||| ||| | |||||| | | | ||||||||||||||||| || || || 
Sbjct: 769 tgtaggaaaggaataaacagatcaattagacttcgagaagcctcataaagtgcctctttg 710

                                                    
Query: 406 ggggttaaacttccattagtccatatttctagaaaaagtat 446
           || || | ||||||||| ||||||||||| | |||||||||
Sbjct: 709 ggagtaacacttccattggtccatatttcaataaaaagtat 669

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                                
Query: 202      aattctaattgatcaataaaaatacaattcaa 233
                |||||||||| |||||||||||||||||||||
Sbjct: 24560814 aattctaatttatcaataaaaatacaattcaa 24560783


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9,086,844
Number of Sequences: 3902068
Number of extensions: 9086844
Number of successful extensions: 202198
Number of sequences better than 10.0: 360
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 199776
Number of HSP's gapped (non-prelim): 2402
length of query: 596
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 573
effective length of database: 17,143,297,704
effective search space: 9823109584392
effective search space used: 9823109584392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---