ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd25m22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470318.1| Oryza sativa (japonica cultivar-group), mRNA 163 9e-37
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 163 9e-37
3gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genom... 163 9e-37
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 163 9e-37
5dbj|AK066209.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 9e-37
6ref|XM_477242.1| Oryza sativa (japonica cultivar-group), mRNA 119 1e-23
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
8dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
9dbj|AK102293.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 1e-23
10gb|CP000107.1| Ehrlichia canis str. Jake, complete genome 46 0.14
11gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome 42 2.2
12gb|L21975.1|PUMPRHPA Petroselinum crispum homeodomain protein (P... 42 2.2
13gb|AE010374.1| Methanopyrus kandleri AV19 section 73 of 157 of t... 40 8.8
14gb|AY706749.1| Thalassiosira pseudonana silaffin precursor (Sil1... 40 8.8
15gb|AC009842.9| Drosophila melanogaster clone BACR04C12, complete... 40 8.8
16gb|AC124492.4| Mus musculus BAC clone RP23-454I23 from chromosom... 40 8.8
17emb|AL606808.4| Human DNA sequence from clone RP11-101F8 on chro... 40 8.8
18gb|AC163012.4| Mus musculus chromosome 8, clone RP23-22A17, comp... 40 8.8
19gb|AC107300.6| Homo sapiens 3 BAC RP11-516H5 (Roswell Park Cance... 40 8.8
20gb|AC008099.5| Drosophila melanogaster, chromosome 2L, region 25... 40 8.8
21emb|AL845281.5| Mouse DNA sequence from clone RP23-476B1 on chro... 40 8.8
22gb|AC153657.4| Mus musculus BAC clone RP23-324B3 from chromosome... 40 8.8
23gb|AC145419.3| Dasypus novemcinctus clone VMRC5-468K1, complete ... 40 8.8
24gb|AE003576.5| Drosophila melanogaster chromosome 2L, section 15... 40 8.8
25gb|AC120547.8| Mus musculus chromosome 8, clone RP23-243L19, com... 40 8.8
26emb|BX294443.5| Mouse DNA sequence from clone RP23-303J9 on chro... 40 8.8
27gb|AE015925.1| Chlamydophila caviae GPIC, complete genome 40 8.8
28dbj|AP006402.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 8.8 
>ref|XM_470318.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2278

 Score =  163 bits (82), Expect = 9e-37
 Identities = 148/170 (87%)
 Strand = Plus / Minus

                                                                        
Query: 476  agtttccagtgatcctgatggccatcgagacattgtgcatgctcacatcagctatataca 535
            ||||||| |||||||||||||||||||| ||||||| |||||||||||||| ||| ||||
Sbjct: 1576 agtttccggtgatcctgatggccatcgaaacattgtccatgctcacatcagatatgtaca 1517

                                                                        
Query: 536  cattccttacatatcctccgcgtcctggagcagtcttgattctgatcccatgcaacgagt 595
            | ||| | ||||| ||||| || |||||||| ||||||||||||||||| ||||  ||||
Sbjct: 1516 cgttcttcacataccctccacgccctggagcggtcttgattctgatcccgtgcattgagt 1457

                                                              
Query: 596  tcacaatgcggaggccttctgcccgaacttcagatatgccacctgacatc 645
            | || |||||||| || || ||||| ||||| ||||||||||||||||||
Sbjct: 1456 tgacgatgcggagaccctcagcccggacttcggatatgccacctgacatc 1407



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 152/186 (81%)
 Strand = Plus / Minus

                                                                        
Query: 270  aagaactgccaccgttgtagcagattggtgtctcttcacaatctgttttgagttgctcgc 329
            ||||||| ||||| |  ||||| |||||||||| | ||||||||||| |||||||||| |
Sbjct: 1870 aagaacttccaccatcatagcaaattggtgtctgtccacaatctgttctgagttgctcac 1811

                                                                        
Query: 330  acgactctggggtcacggagttggaatacccttggatacgtgagcaattccatggatatc 389
            | ||||||||| |||| ||||| ||||| |||| |||| | || |||||||| ||||   
Sbjct: 1810 atgactctgggatcacagagtttgaataaccttcgataagcgaacaattccagggatgca 1751

                                                                        
Query: 390  tggatcgtacgctgagagagacattggagatgcatatgctactgaagttgtcgccctcaa 449
            | ||  |||| ||||| || |||||||| | ||| ||||| ||||||||||| |||||||
Sbjct: 1750 tagactgtacactgagggaaacattggacaggcaaatgctgctgaagttgtccccctcaa 1691

                  
Query: 450  tacctt 455
            | ||||
Sbjct: 1690 ttcctt 1685
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  163 bits (82), Expect = 9e-37
 Identities = 148/170 (87%)
 Strand = Plus / Minus

                                                                            
Query: 476      agtttccagtgatcctgatggccatcgagacattgtgcatgctcacatcagctatataca 535
                ||||||| |||||||||||||||||||| ||||||| |||||||||||||| ||| ||||
Sbjct: 34737039 agtttccggtgatcctgatggccatcgaaacattgtccatgctcacatcagatatgtaca 34736980

                                                                            
Query: 536      cattccttacatatcctccgcgtcctggagcagtcttgattctgatcccatgcaacgagt 595
                | ||| | ||||| ||||| || |||||||| ||||||||||||||||| ||||  ||||
Sbjct: 34736979 cgttcttcacataccctccacgccctggagcggtcttgattctgatcccgtgcattgagt 34736920

                                                                  
Query: 596      tcacaatgcggaggccttctgcccgaacttcagatatgccacctgacatc 645
                | || |||||||| || || ||||| ||||| ||||||||||||||||||
Sbjct: 34736919 tgacgatgcggagaccctcagcccggacttcggatatgccacctgacatc 34736870



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 152/186 (81%)
 Strand = Plus / Minus

                                                                            
Query: 270      aagaactgccaccgttgtagcagattggtgtctcttcacaatctgttttgagttgctcgc 329
                ||||||| ||||| |  ||||| |||||||||| | ||||||||||| |||||||||| |
Sbjct: 34737333 aagaacttccaccatcatagcaaattggtgtctgtccacaatctgttctgagttgctcac 34737274

                                                                            
Query: 330      acgactctggggtcacggagttggaatacccttggatacgtgagcaattccatggatatc 389
                | ||||||||| |||| ||||| ||||| |||| |||| | || |||||||| ||||   
Sbjct: 34737273 atgactctgggatcacagagtttgaataaccttcgataagcgaacaattccagggatgca 34737214

                                                                            
Query: 390      tggatcgtacgctgagagagacattggagatgcatatgctactgaagttgtcgccctcaa 449
                | ||  |||| ||||| || |||||||| | ||| ||||| ||||||||||| |||||||
Sbjct: 34737213 tagactgtacactgagggaaacattggacaggcaaatgctgctgaagttgtccccctcaa 34737154

                      
Query: 450      tacctt 455
                | ||||
Sbjct: 34737153 ttcctt 34737148
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>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete
              sequence
          Length = 164352

 Score =  163 bits (82), Expect = 9e-37
 Identities = 148/170 (87%)
 Strand = Plus / Plus

                                                                          
Query: 476    agtttccagtgatcctgatggccatcgagacattgtgcatgctcacatcagctatataca 535
              ||||||| |||||||||||||||||||| ||||||| |||||||||||||| ||| ||||
Sbjct: 125611 agtttccggtgatcctgatggccatcgaaacattgtccatgctcacatcagatatgtaca 125670

                                                                          
Query: 536    cattccttacatatcctccgcgtcctggagcagtcttgattctgatcccatgcaacgagt 595
              | ||| | ||||| ||||| || |||||||| ||||||||||||||||| ||||  ||||
Sbjct: 125671 cgttcttcacataccctccacgccctggagcggtcttgattctgatcccgtgcattgagt 125730

                                                                
Query: 596    tcacaatgcggaggccttctgcccgaacttcagatatgccacctgacatc 645
              | || |||||||| || || ||||| ||||| ||||||||||||||||||
Sbjct: 125731 tgacgatgcggagaccctcagcccggacttcggatatgccacctgacatc 125780



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 152/186 (81%)
 Strand = Plus / Plus

                                                                          
Query: 270    aagaactgccaccgttgtagcagattggtgtctcttcacaatctgttttgagttgctcgc 329
              ||||||| ||||| |  ||||| |||||||||| | ||||||||||| |||||||||| |
Sbjct: 125317 aagaacttccaccatcatagcaaattggtgtctgtccacaatctgttctgagttgctcac 125376

                                                                          
Query: 330    acgactctggggtcacggagttggaatacccttggatacgtgagcaattccatggatatc 389
              | ||||||||| |||| ||||| ||||| |||| |||| | || |||||||| ||||   
Sbjct: 125377 atgactctgggatcacagagtttgaataaccttcgataagcgaacaattccagggatgca 125436

                                                                          
Query: 390    tggatcgtacgctgagagagacattggagatgcatatgctactgaagttgtcgccctcaa 449
              | ||  |||| ||||| || |||||||| | ||| ||||| ||||||||||| |||||||
Sbjct: 125437 tagactgtacactgagggaaacattggacaggcaaatgctgctgaagttgtccccctcaa 125496

                    
Query: 450    tacctt 455
              | ||||
Sbjct: 125497 ttcctt 125502
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  163 bits (82), Expect = 9e-37
 Identities = 148/170 (87%)
 Strand = Plus / Minus

                                                                            
Query: 476      agtttccagtgatcctgatggccatcgagacattgtgcatgctcacatcagctatataca 535
                ||||||| |||||||||||||||||||| ||||||| |||||||||||||| ||| ||||
Sbjct: 34827111 agtttccggtgatcctgatggccatcgaaacattgtccatgctcacatcagatatgtaca 34827052

                                                                            
Query: 536      cattccttacatatcctccgcgtcctggagcagtcttgattctgatcccatgcaacgagt 595
                | ||| | ||||| ||||| || |||||||| ||||||||||||||||| ||||  ||||
Sbjct: 34827051 cgttcttcacataccctccacgccctggagcggtcttgattctgatcccgtgcattgagt 34826992

                                                                  
Query: 596      tcacaatgcggaggccttctgcccgaacttcagatatgccacctgacatc 645
                | || |||||||| || || ||||| ||||| ||||||||||||||||||
Sbjct: 34826991 tgacgatgcggagaccctcagcccggacttcggatatgccacctgacatc 34826942



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 152/186 (81%)
 Strand = Plus / Minus

                                                                            
Query: 270      aagaactgccaccgttgtagcagattggtgtctcttcacaatctgttttgagttgctcgc 329
                ||||||| ||||| |  ||||| |||||||||| | ||||||||||| |||||||||| |
Sbjct: 34827405 aagaacttccaccatcatagcaaattggtgtctgtccacaatctgttctgagttgctcac 34827346

                                                                            
Query: 330      acgactctggggtcacggagttggaatacccttggatacgtgagcaattccatggatatc 389
                | ||||||||| |||| ||||| ||||| |||| |||| | || |||||||| ||||   
Sbjct: 34827345 atgactctgggatcacagagtttgaataaccttcgataagcgaacaattccagggatgca 34827286

                                                                            
Query: 390      tggatcgtacgctgagagagacattggagatgcatatgctactgaagttgtcgccctcaa 449
                | ||  |||| ||||| || |||||||| | ||| ||||| ||||||||||| |||||||
Sbjct: 34827285 tagactgtacactgagggaaacattggacaggcaaatgctgctgaagttgtccccctcaa 34827226

                      
Query: 450      tacctt 455
                | ||||
Sbjct: 34827225 ttcctt 34827220
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>dbj|AK066209.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058D09, full
            insert sequence
          Length = 2279

 Score =  163 bits (82), Expect = 9e-37
 Identities = 148/170 (87%)
 Strand = Plus / Minus

                                                                        
Query: 476  agtttccagtgatcctgatggccatcgagacattgtgcatgctcacatcagctatataca 535
            ||||||| |||||||||||||||||||| ||||||| |||||||||||||| ||| ||||
Sbjct: 1577 agtttccggtgatcctgatggccatcgaaacattgtccatgctcacatcagatatgtaca 1518

                                                                        
Query: 536  cattccttacatatcctccgcgtcctggagcagtcttgattctgatcccatgcaacgagt 595
            | ||| | ||||| ||||| || |||||||| ||||||||||||||||| ||||  ||||
Sbjct: 1517 cgttcttcacataccctccacgccctggagcggtcttgattctgatcccgtgcattgagt 1458

                                                              
Query: 596  tcacaatgcggaggccttctgcccgaacttcagatatgccacctgacatc 645
            | || |||||||| || || ||||| ||||| ||||||||||||||||||
Sbjct: 1457 tgacgatgcggagaccctcagcccggacttcggatatgccacctgacatc 1408



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 152/186 (81%)
 Strand = Plus / Minus

                                                                        
Query: 270  aagaactgccaccgttgtagcagattggtgtctcttcacaatctgttttgagttgctcgc 329
            ||||||| ||||| |  ||||| |||||||||| | ||||||||||| |||||||||| |
Sbjct: 1871 aagaacttccaccatcatagcaaattggtgtctgtccacaatctgttctgagttgctcac 1812

                                                                        
Query: 330  acgactctggggtcacggagttggaatacccttggatacgtgagcaattccatggatatc 389
            | ||||||||| |||| ||||| ||||| |||| |||| | || |||||||| ||||   
Sbjct: 1811 atgactctgggatcacagagtttgaataaccttcgataagcgaacaattccagggatgca 1752

                                                                        
Query: 390  tggatcgtacgctgagagagacattggagatgcatatgctactgaagttgtcgccctcaa 449
            | ||  |||| ||||| || |||||||| | ||| ||||| ||||||||||| |||||||
Sbjct: 1751 tagactgtacactgagggaaacattggacaggcaaatgctgctgaagttgtccccctcaa 1692

                  
Query: 450  tacctt 455
            | ||||
Sbjct: 1691 ttcctt 1686
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>ref|XM_477242.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1797

 Score =  119 bits (60), Expect = 1e-23
 Identities = 150/180 (83%)
 Strand = Plus / Minus

                                                                        
Query: 466  tgttcgccgtagtttccagtgatcctgatggccatcgagacattgtgcatgctcacatca 525
            ||||| || ||||||||||||||||||||||| || |||||||||| |||||||||||||
Sbjct: 1219 tgttccccatagtttccagtgatcctgatggctattgagacattgtccatgctcacatca 1160

                                                                        
Query: 526  gctatatacacattccttacatatcctccgcgtcctggagcagtcttgattctgatccca 585
            ||||| || |  ||  | ||||| || ||||| ||||| ||||||||||||||||| |||
Sbjct: 1159 gctatgtatatgtttttcacatacccaccgcgccctggggcagtcttgattctgattcca 1100

                                                                        
Query: 586  tgcaacgagttcacaatgcggaggccttctgcccgaacttcagatatgccacctgacatc 645
            |||| |||||| |  |  || ||||| || || ||||| || ||||| ||||||||||||
Sbjct: 1099 tgcaccgagttgatgaaacgaaggccctcagctcgaacgtctgatataccacctgacatc 1040
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  119 bits (60), Expect = 1e-23
 Identities = 150/180 (83%)
 Strand = Plus / Plus

                                                                           
Query: 466     tgttcgccgtagtttccagtgatcctgatggccatcgagacattgtgcatgctcacatca 525
               ||||| || ||||||||||||||||||||||| || |||||||||| |||||||||||||
Sbjct: 8111710 tgttccccatagtttccagtgatcctgatggctattgagacattgtccatgctcacatca 8111769

                                                                           
Query: 526     gctatatacacattccttacatatcctccgcgtcctggagcagtcttgattctgatccca 585
               ||||| || |  ||  | ||||| || ||||| ||||| ||||||||||||||||| |||
Sbjct: 8111770 gctatgtatatgtttttcacatacccaccgcgccctggggcagtcttgattctgattcca 8111829

                                                                           
Query: 586     tgcaacgagttcacaatgcggaggccttctgcccgaacttcagatatgccacctgacatc 645
               |||| |||||| |  |  || ||||| || || ||||| || ||||| ||||||||||||
Sbjct: 8111830 tgcaccgagttgatgaaacgaaggccctcagctcgaacgtctgatataccacctgacatc 8111889
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>dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1058_C08
          Length = 117923

 Score =  119 bits (60), Expect = 1e-23
 Identities = 150/180 (83%)
 Strand = Plus / Plus

                                                                         
Query: 466   tgttcgccgtagtttccagtgatcctgatggccatcgagacattgtgcatgctcacatca 525
             ||||| || ||||||||||||||||||||||| || |||||||||| |||||||||||||
Sbjct: 45482 tgttccccatagtttccagtgatcctgatggctattgagacattgtccatgctcacatca 45541

                                                                         
Query: 526   gctatatacacattccttacatatcctccgcgtcctggagcagtcttgattctgatccca 585
             ||||| || |  ||  | ||||| || ||||| ||||| ||||||||||||||||| |||
Sbjct: 45542 gctatgtatatgtttttcacatacccaccgcgccctggggcagtcttgattctgattcca 45601

                                                                         
Query: 586   tgcaacgagttcacaatgcggaggccttctgcccgaacttcagatatgccacctgacatc 645
             |||| |||||| |  |  || ||||| || || ||||| || ||||| ||||||||||||
Sbjct: 45602 tgcaccgagttgatgaaacgaaggccctcagctcgaacgtctgatataccacctgacatc 45661
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>dbj|AK102293.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089L01, full
            insert sequence
          Length = 1798

 Score =  119 bits (60), Expect = 1e-23
 Identities = 150/180 (83%)
 Strand = Plus / Minus

                                                                        
Query: 466  tgttcgccgtagtttccagtgatcctgatggccatcgagacattgtgcatgctcacatca 525
            ||||| || ||||||||||||||||||||||| || |||||||||| |||||||||||||
Sbjct: 1220 tgttccccatagtttccagtgatcctgatggctattgagacattgtccatgctcacatca 1161

                                                                        
Query: 526  gctatatacacattccttacatatcctccgcgtcctggagcagtcttgattctgatccca 585
            ||||| || |  ||  | ||||| || ||||| ||||| ||||||||||||||||| |||
Sbjct: 1160 gctatgtatatgtttttcacatacccaccgcgccctggggcagtcttgattctgattcca 1101

                                                                        
Query: 586  tgcaacgagttcacaatgcggaggccttctgcccgaacttcagatatgccacctgacatc 645
            |||| |||||| |  |  || ||||| || || ||||| || ||||| ||||||||||||
Sbjct: 1100 tgcaccgagttgatgaaacgaaggccctcagctcgaacgtctgatataccacctgacatc 1041
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>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome
          Length = 1315030

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 193    gaacatatgcagtaaagaattta 215
              |||||||||||||||||||||||
Sbjct: 925651 gaacatatgcagtaaagaattta 925673
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>gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome
          Length = 1176248

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 193    gaacatatgcagtaaagaatt 213
              |||||||||||||||||||||
Sbjct: 341365 gaacatatgcagtaaagaatt 341345
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>gb|L21975.1|PUMPRHPA Petroselinum crispum homeodomain protein (PRHP) mRNA, complete cds
          Length = 4104

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 571 ttgattctgatcccatgcaac 591
           |||||||||||||||||||||
Sbjct: 406 ttgattctgatcccatgcaac 426
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>gb|AE010374.1| Methanopyrus kandleri AV19 section 73 of 157 of the complete genome
          Length = 14488

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   atcctccgcgtcctggagca 567
             ||||||||||||||||||||
Sbjct: 10929 atcctccgcgtcctggagca 10948
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>gb|AY706749.1| Thalassiosira pseudonana silaffin precursor (Sil1) mRNA, complete cds
          Length = 1506

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 606  gaggccttctgcccgaactt 625
            ||||||||||||||||||||
Sbjct: 1363 gaggccttctgcccgaactt 1344
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>gb|AC009842.9| Drosophila melanogaster clone BACR04C12, complete sequence
          Length = 163183

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 86    aaaactgatgcaaaaatgagatgt 109
             |||||||| |||||||||||||||
Sbjct: 48402 aaaactgaagcaaaaatgagatgt 48425
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>gb|AC124492.4| Mus musculus BAC clone RP23-454I23 from chromosome 12, complete
            sequence
          Length = 176782

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 79   tctaagcaaaactgatgcaa 98
            ||||||||||||||||||||
Sbjct: 5714 tctaagcaaaactgatgcaa 5695
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>emb|AL606808.4| Human DNA sequence from clone RP11-101F8 on chromosome 13 Contains
            part of a novel gene, complete sequence
          Length = 45785

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 68   ggaaactgcaatctaagcaa 87
            ||||||||||||||||||||
Sbjct: 6722 ggaaactgcaatctaagcaa 6741
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>gb|AC163012.4| Mus musculus chromosome 8, clone RP23-22A17, complete sequence
          Length = 211779

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 560   ctggagcagtcttgattctg 579
             ||||||||||||||||||||
Sbjct: 49835 ctggagcagtcttgattctg 49816
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>gb|AC107300.6| Homo sapiens 3 BAC RP11-516H5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 161699

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     ggaaactgcaatctaagcaa 87
              ||||||||||||||||||||
Sbjct: 157463 ggaaactgcaatctaagcaa 157482
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>gb|AC008099.5| Drosophila melanogaster, chromosome 2L, region 25A-25A, BAC clone
              BACR37J18, complete sequence
          Length = 199916

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 86     aaaactgatgcaaaaatgagatgt 109
              |||||||| |||||||||||||||
Sbjct: 170424 aaaactgaagcaaaaatgagatgt 170447
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>emb|AL845281.5| Mouse DNA sequence from clone RP23-476B1 on chromosome 2, complete
              sequence
          Length = 195228

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 218    aatatgttgccactaggctt 237
              ||||||||||||||||||||
Sbjct: 176948 aatatgttgccactaggctt 176929
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>gb|AC153657.4| Mus musculus BAC clone RP23-324B3 from chromosome 12, complete sequence
          Length = 208058

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     tctaagcaaaactgatgcaa 98
              ||||||||||||||||||||
Sbjct: 120970 tctaagcaaaactgatgcaa 120989
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>gb|AC145419.3| Dasypus novemcinctus clone VMRC5-468K1, complete sequence
          Length = 151116

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 419   atgcatatgctactgaagtt 438
             ||||||||||||||||||||
Sbjct: 67786 atgcatatgctactgaagtt 67767
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>gb|AE003576.5| Drosophila melanogaster chromosome 2L, section 15 of 83 of the complete
              sequence
          Length = 289893

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 86     aaaactgatgcaaaaatgagatgt 109
              |||||||| |||||||||||||||
Sbjct: 273471 aaaactgaagcaaaaatgagatgt 273448
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>gb|AC120547.8| Mus musculus chromosome 8, clone RP23-243L19, complete sequence
          Length = 170147

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 560   ctggagcagtcttgattctg 579
             ||||||||||||||||||||
Sbjct: 56710 ctggagcagtcttgattctg 56729
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>emb|BX294443.5| Mouse DNA sequence from clone RP23-303J9 on chromosome X, complete
              sequence
          Length = 136741

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 530    tatacacattccttacatat 549
              ||||||||||||||||||||
Sbjct: 128490 tatacacattccttacatat 128509
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>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome
          Length = 1173390

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 258    aacggaaggctaaagaactgccac 281
              ||||||||||| ||||||||||||
Sbjct: 280780 aacggaaggctcaagaactgccac 280757
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>dbj|AP006402.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT34J23, TM0284,
             complete sequence
          Length = 92675

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 206   aaagaatttagtaatatgtt 225
             ||||||||||||||||||||
Sbjct: 89937 aaagaatttagtaatatgtt 89918


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,559,314
Number of Sequences: 3902068
Number of extensions: 4559314
Number of successful extensions: 91763
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91599
Number of HSP's gapped (non-prelim): 151
length of query: 645
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 622
effective length of database: 17,143,297,704
effective search space: 10663131171888
effective search space used: 10663131171888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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