ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26b19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CLTR2_MOUSE (Q920A1) Cysteinyl leukotriene receptor 2 (CysLTR2) 32 1.4
2TEGU_EBV (P03186) Large tegument protein 30 8.8

>CLTR2_MOUSE (Q920A1) Cysteinyl leukotriene receptor 2 (CysLTR2)|
          Length = 309

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 26/85 (30%), Positives = 39/85 (45%)
 Frame = +3

Query: 15  SPCKXXNEIVVQHMRVN*CSYPLLFIFITDTYYSMNEINCHHTNNQMGPHNKHSISALNK 194
           SP K  + +++ H+ V    + L F+ +T  Y  +  I       + GP   H   AL  
Sbjct: 175 SPQKFKSLLIMNHIAVA-VGFLLPFLTLTVCYLLIIRILLKAEIPESGPRAAHR-KALTT 232

Query: 195 C*ATMISSLLCSAPDHHLLPIYLVT 269
               MI+ LLC  P H L  ++LVT
Sbjct: 233 IVIAMITFLLCFLPYHALRTLHLVT 257



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>TEGU_EBV (P03186) Large tegument protein|
          Length = 3149

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 22/79 (27%), Positives = 35/79 (44%)
 Frame = +3

Query: 228 SAPDHHLLPIYLVTRVQSPVPQCHLQRPPAAPLEGRXXXXXXXXXXXXQPERTAASSLNP 407
           ++P  H  P+  +    +P P+  LQ P   PL                P  TAA++  P
Sbjct: 476 ASPTPHPAPVSTIAPSVTPSPRLPLQIP--IPLPQAAPSNPKIPLTTPSPSPTAAAA--P 531

Query: 408 QKTILSPASQRERLPRSAS 464
             T LSP   +++ P+SA+
Sbjct: 532 TTTTLSPPPTQQQPPQSAA 550


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,427,019
Number of Sequences: 219361
Number of extensions: 1286657
Number of successful extensions: 3272
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3270
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6655306086
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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