ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26b19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC116664.1| Papio hamadryas, clone RP41-57E23, complete sequence 44 0.59
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.59
3dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.59
4gb|AC132852.12| Mus musculus chromosome 9, clone RP24-298N7, com... 42 2.3
5gb|AC165425.2| Mus musculus BAC clone RP23-252G18 from chromosom... 42 2.3
6gb|AF254982.4| Homo sapiens chromosome 21 clone CTD-2503J9 map p... 42 2.3
7ref|XM_505999.1| Yarrowia lipolytica CLIB122, YALI0F28633g predi... 42 2.3
8emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete ... 42 2.3
9emb|AL663001.3|OSJN00197 Oryza sativa genomic DNA, chromosome 4,... 42 2.3
10gb|AC147539.1| Pan troglodytes clone rp43-131i22, complete sequence 42 2.3
11gb|AC007666.12| Homo sapiens chromosome 22 clone p273a17 map 22q... 42 2.3
12gb|AC000052.16| Homo sapiens Chromosome 22q11.2 BAC Clone 77h2 I... 42 2.3
13gb|AC004019.20| Homo sapiens Chromosome 22q11.2 BAC Clone 357f7 ... 42 2.3
14dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
15dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
16dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 2.3
17gb|AY961509.1| Lysiphlebus testaceipes putative mitochondrial ri... 42 2.3
18dbj|AP005636.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
19dbj|AP005784.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
20dbj|AK101300.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.3
21dbj|AK061283.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.3
22emb|AL606994.3|OSJN00114 Oryza sativa genomic DNA, chromosome 4,... 42 2.3
23emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 42 2.3
24gb|AC154042.1| Drosophila melanogaster clone BACR46E23, complete... 40 9.3
25gb|AC159412.1| Trypanosoma brucei chromosome 7 clone RPCI93-21H1... 40 9.3
26gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence 40 9.3
27gb|AC159702.1| Trypanosoma brucei chromosome 7 clone RPCI93-30D1... 40 9.3
28gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome 40 9.3
29gb|AC115013.18| Mus musculus chromosome 10, clone RP24-193P19, c... 40 9.3
30gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 9.3
31gb|AY659387.1| Synthetic construct Peudomonas aeruginosa clone F... 40 9.3
32gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 9.3
33gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 9.3
34gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, c... 40 9.3
35gb|AE017286.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 9.3
36gb|AC147788.1| Latimeria menadoensis clone VMRC4-19C10, complete... 40 9.3
37ref|XM_842706.1| Leishmania major strain Friedlin hypothetical p... 40 9.3
38ref|XM_534076.2| PREDICTED: Canis familiaris similar to pleckstr... 40 9.3
39ref|XM_818698.1| Trypanosoma brucei TREU927 clone RPCI93-21H15 h... 40 9.3
40ref|XM_748826.1| Aspergillus fumigatus Af293 vacuolar protein so... 40 9.3
41gb|AC129227.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.3
42emb|AL022018.1|DMC8D8 Drosophila melanogaster cosmid clone 8D8 40 9.3
43gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 9.3
44gb|AC104141.8| Drosophila melanogaster X BAC RP98-9H15 (Roswell ... 40 9.3
45gb|AC023691.3| Drosophila melanogaster X BAC RP98-12H1 (Roswell ... 40 9.3
46gb|AC104288.4| Drosophila melanogaster X BAC RP98-30G24 (Roswell... 40 9.3
47emb|BX649530.13| Zebrafish DNA sequence from clone DKEYP-33B5 in... 40 9.3
48dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
49dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
50gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 9.3
51gb|AC078863.15|AC078863 Mus musculus BAC RP23-406N7 (Roswell Pa... 40 9.3
52gb|AE004686.1| Pseudomonas aeruginosa PAO1, section 247 of 529 o... 40 9.3
53gb|AE004483.1| Pseudomonas aeruginosa PAO1, section 44 of 529 of... 40 9.3
54gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 9.3
55dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
56gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 ... 40 9.3
57gb|AE003420.2| Drosophila melanogaster chromosome X, section 4 o... 40 9.3
58dbj|AB093554.1| Streptomyces laurentii plasmid pSLS DNA, complet... 40 9.3
59gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 9.3
60gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.3
61emb|AL929186.7| Mouse DNA sequence from clone RP23-399K8 on chro... 40 9.3
62gb|DQ267625.1| Zea mays glycine rich protein 3 (Grp3) mRNA, Grp3... 40 9.3 
>gb|AC116664.1| Papio hamadryas, clone RP41-57E23, complete sequence
          Length = 175388

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 214    cctctctgctctgctccgctcc 235
              ||||||||||||||||||||||
Sbjct: 150458 cctctctgctctgctccgctcc 150479
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 211     tctcctctctgctctgctccgc 232
               ||||||||||||||||||||||
Sbjct: 6508735 tctcctctctgctctgctccgc 6508714
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>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0690H04
          Length = 137319

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 211   tctcctctctgctctgctccgc 232
             ||||||||||||||||||||||
Sbjct: 25111 tctcctctctgctctgctccgc 25090
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>gb|AC132852.12| Mus musculus chromosome 9, clone RP24-298N7, complete sequence
          Length = 183786

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 409   agaagaccatcctttctccag 429
             |||||||||||||||||||||
Sbjct: 27441 agaagaccatcctttctccag 27421
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>gb|AC165425.2| Mus musculus BAC clone RP23-252G18 from chromosome 9, complete sequence
          Length = 217329

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 409    agaagaccatcctttctccag 429
              |||||||||||||||||||||
Sbjct: 169983 agaagaccatcctttctccag 169963
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>gb|AF254982.4| Homo sapiens chromosome 21 clone CTD-2503J9 map p11-q21.1, complete
             sequence
          Length = 211345

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 212   ctcctctctgctctgctccgctcca 236
             ||||||||||||||||||| |||||
Sbjct: 81283 ctcctctctgctctgctccactcca 81259
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>ref|XM_505999.1| Yarrowia lipolytica CLIB122, YALI0F28633g predicted mRNA
          Length = 2139

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 399 ctgaacccacagaagaccatc 419
           |||||||||||||||||||||
Sbjct: 323 ctgaacccacagaagaccatc 303
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>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29
          Length = 295150

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 484    ggccctggccgacgccgactt 504
              |||||||||||||||||||||
Sbjct: 114093 ggccctggccgacgccgactt 114113
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>emb|AL663001.3|OSJN00197 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022P19,
            complete sequence
          Length = 135836

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 215  ctctctgctctgctccgctcc 235
            |||||||||||||||||||||
Sbjct: 2523 ctctctgctctgctccgctcc 2503
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>gb|AC147539.1| Pan troglodytes clone rp43-131i22, complete sequence
          Length = 175485

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 217    ctctgctctgctccgctccag 237
              |||||||||||||||||||||
Sbjct: 158557 ctctgctctgctccgctccag 158537
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>gb|AC007666.12| Homo sapiens chromosome 22 clone p273a17 map 22q11.2, complete sequence
          Length = 139388

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 217   ctctgctctgctccgctccag 237
             |||||||||||||||||||||
Sbjct: 41113 ctctgctctgctccgctccag 41093
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>gb|AC000052.16| Homo sapiens Chromosome 22q11.2 BAC Clone 77h2 In CES Region, complete
              sequence
          Length = 190363

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 217    ctctgctctgctccgctccag 237
              |||||||||||||||||||||
Sbjct: 121895 ctctgctctgctccgctccag 121875
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>gb|AC004019.20| Homo sapiens Chromosome 22q11.2 BAC Clone 357f7 In CES Region, complete
              sequence
          Length = 260409

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 217    ctctgctctgctccgctccag 237
              |||||||||||||||||||||
Sbjct: 194038 ctctgctctgctccgctccag 194018
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 215     ctctctgctctgctccgctcc 235
               |||||||||||||||||||||
Sbjct: 7275153 ctctctgctctgctccgctcc 7275133
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 211      tctcctctctgctctgctccgctcc 235
                |||||||||||||| ||||||||||
Sbjct: 14871612 tctcctctctgctccgctccgctcc 14871588
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 358     cggcggcggcgtcccagccgg 378
               |||||||||||||||||||||
Sbjct: 6635911 cggcggcggcgtcccagccgg 6635931
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>gb|AY961509.1| Lysiphlebus testaceipes putative mitochondrial ribosomal protein
           L36 (RpL36) mRNA, complete cds; nuclear gene for
           mitochondrial product
          Length = 393

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 107 ttattattcaatgaatgaaat 127
           |||||||||||||||||||||
Sbjct: 98  ttattattcaatgaatgaaat 78
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>dbj|AP005636.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0707C02
          Length = 163609

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 211    tctcctctctgctctgctccgctcc 235
              |||||||||||||| ||||||||||
Sbjct: 157001 tctcctctctgctccgctccgctcc 156977
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>dbj|AP005784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0014G10
          Length = 164147

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 211   tctcctctctgctctgctccgctcc 235
             |||||||||||||| ||||||||||
Sbjct: 79951 tctcctctctgctccgctccgctcc 79927
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>dbj|AK101300.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033J17, full
           insert sequence
          Length = 1087

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 211 tctcctctctgctctgctccgctcc 235
           |||||||||||||| ||||||||||
Sbjct: 23  tctcctctctgctccgctccgctcc 47
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>dbj|AK061283.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-G01, full
           insert sequence
          Length = 1082

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 211 tctcctctctgctctgctccgctcc 235
           |||||||||||||| ||||||||||
Sbjct: 30  tctcctctctgctccgctccgctcc 54
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>emb|AL606994.3|OSJN00114 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035O13,
              complete sequence
          Length = 143298

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 215    ctctctgctctgctccgctcc 235
              |||||||||||||||||||||
Sbjct: 138890 ctctctgctctgctccgctcc 138870
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 399     ctgaacccacagaagaccatc 419
               |||||||||||||||||||||
Sbjct: 3635506 ctgaacccacagaagaccatc 3635486
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>gb|AC154042.1| Drosophila melanogaster clone BACR46E23, complete sequence
          Length = 181148

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 134    ccatcacacaaataatcaaa 153
              ||||||||||||||||||||
Sbjct: 128060 ccatcacacaaataatcaaa 128079
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>gb|AC159412.1| Trypanosoma brucei chromosome 7 clone RPCI93-21H15, complete sequence
          Length = 159636

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 329  gggccggagtgcctcctcggtgccggcaccgg 360
            ||||| ||||||||||| |||||| |||||||
Sbjct: 4238 gggccagagtgcctccttggtgcctgcaccgg 4269
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>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence
          Length = 2205233

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 329     gggccggagtgcctcctcggtgccggcaccgg 360
               ||||| ||||||||||| |||||| |||||||
Sbjct: 2102360 gggccagagtgcctccttggtgcctgcaccgg 2102329
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>gb|AC159702.1| Trypanosoma brucei chromosome 7 clone RPCI93-30D13, complete sequence
          Length = 171752

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 329    gggccggagtgcctcctcggtgccggcaccgg 360
              ||||| ||||||||||| |||||| |||||||
Sbjct: 102874 gggccagagtgcctccttggtgcctgcaccgg 102905
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>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 337    gtgcctcctcggtgccggca 356
              ||||||||||||||||||||
Sbjct: 661384 gtgcctcctcggtgccggca 661365
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>gb|AC115013.18| Mus musculus chromosome 10, clone RP24-193P19, complete sequence
          Length = 183402

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   ttattattcaatgaatgaaa 126
             ||||||||||||||||||||
Sbjct: 76562 ttattattcaatgaatgaaa 76581
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    ccggcaccggcggcggcgtc 370
              ||||||||||||||||||||
Sbjct: 358782 ccggcaccggcggcggcgtc 358763
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>gb|AY659387.1| Synthetic construct Peudomonas aeruginosa clone FLH116067.01F
           PA2575 gene, partial cds
          Length = 603

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 346 cggtgccggcaccggcggcg 365
           ||||||||||||||||||||
Sbjct: 286 cggtgccggcaccggcggcg 267
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 299     ccttcaacggccgcctgccg 318
               ||||||||||||||||||||
Sbjct: 1655172 ccttcaacggccgcctgccg 1655191
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 350    gccggcaccggcggcggcgt 369
              ||||||||||||||||||||
Sbjct: 459173 gccggcaccggcggcggcgt 459154
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>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence
          Length = 1212674

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 428    agcgtctcaacgtgagcggctccc 451
              |||| |||||||||||||||||||
Sbjct: 567762 agcgcctcaacgtgagcggctccc 567785
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>gb|AE017286.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough plasmid pDV,
              complete sequence
          Length = 202301

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 638    tctccgccgtcaccgtctcc 657
              ||||||||||||||||||||
Sbjct: 163199 tctccgccgtcaccgtctcc 163180
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>gb|AC147788.1| Latimeria menadoensis clone VMRC4-19C10, complete sequence
          Length = 168364

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 217    ctctgctctgctccgctcca 236
              ||||||||||||||||||||
Sbjct: 167837 ctctgctctgctccgctcca 167818
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>ref|XM_842706.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0776)
            partial mRNA
          Length = 2763

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 428  agcgtctcaacgtgagcggctccc 451
            |||| |||||||||||||||||||
Sbjct: 2468 agcgcctcaacgtgagcggctccc 2491
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>ref|XM_534076.2| PREDICTED: Canis familiaris similar to pleckstrin homology domain
           containing, family A member 2 (LOC476874), mRNA
          Length = 3714

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 217 ctctgctctgctccgctcca 236
           ||||||||||||||||||||
Sbjct: 403 ctctgctctgctccgctcca 384
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>ref|XM_818698.1| Trypanosoma brucei TREU927 clone RPCI93-21H15 hypothetical protein
           (Tb927.7.7280) partial mRNA
          Length = 1842

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 329 gggccggagtgcctcctcggtgccggcaccgg 360
           ||||| ||||||||||| |||||| |||||||
Sbjct: 529 gggccagagtgcctccttggtgcctgcaccgg 560
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>ref|XM_748826.1| Aspergillus fumigatus Af293 vacuolar protein sorting-associated
           protein vps17 (Afu5g07150) partial mRNA
          Length = 1839

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 340 cctcctcggtgccggcaccggcgg 363
           |||||||||| |||||||||||||
Sbjct: 676 cctcctcggtcccggcaccggcgg 653
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>gb|AC129227.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0099J16, complete sequence
          Length = 133198

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 350   gccggcaccggcggcggcgtccca 373
             |||||| |||||||||||||||||
Sbjct: 98894 gccggcgccggcggcggcgtccca 98917
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>emb|AL022018.1|DMC8D8 Drosophila melanogaster cosmid clone 8D8
          Length = 38397

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   tctctgctctgctccgctcc 235
             ||||||||||||||||||||
Sbjct: 19571 tctctgctctgctccgctcc 19590
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 345     tcggtgccggcaccggcggc 364
               ||||||||||||||||||||
Sbjct: 3378027 tcggtgccggcaccggcggc 3378046
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>gb|AC104141.8| Drosophila melanogaster X BAC RP98-9H15 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 181360

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   tctctgctctgctccgctcc 235
             ||||||||||||||||||||
Sbjct: 15962 tctctgctctgctccgctcc 15981
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>gb|AC023691.3| Drosophila melanogaster X BAC RP98-12H1 (Roswell Park Cancer
           Institute Drosophila BAC Library) complete sequence
          Length = 179892

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 134 ccatcacacaaataatcaaa 153
           ||||||||||||||||||||
Sbjct: 322 ccatcacacaaataatcaaa 341
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>gb|AC104288.4| Drosophila melanogaster X BAC RP98-30G24 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 164252

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   tctctgctctgctccgctcc 235
             ||||||||||||||||||||
Sbjct: 75477 tctctgctctgctccgctcc 75496
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>emb|BX649530.13| Zebrafish DNA sequence from clone DKEYP-33B5 in linkage group 17,
              complete sequence
          Length = 150656

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    catcacacaaataatcaaat 154
              ||||||||||||||||||||
Sbjct: 109864 catcacacaaataatcaaat 109883
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 350      gccggcaccggcggcggcgtccca 373
                |||||| |||||||||||||||||
Sbjct: 25906072 gccggcgccggcggcggcgtccca 25906049
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 628      cctcgcgtcatctccgccgtcaccgtct 655
                ||||||| || |||||||||||||||||
Sbjct: 13077109 cctcgcgccacctccgccgtcaccgtct 13077082
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 349    tgccggcaccggcggcggcg 368
              ||||||||||||||||||||
Sbjct: 996186 tgccggcaccggcggcggcg 996205
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>gb|AC078863.15|AC078863 Mus musculus  BAC RP23-406N7 (Roswell Park Cancer Institute Mouse BAC
              Library) complete sequence
          Length = 188008

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    cacaacaaacattctatttc 181
              ||||||||||||||||||||
Sbjct: 105161 cacaacaaacattctatttc 105142
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>gb|AE004686.1| Pseudomonas aeruginosa PAO1, section 247 of 529 of the complete
           genome
          Length = 10905

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 346 cggtgccggcaccggcggcg 365
           ||||||||||||||||||||
Sbjct: 490 cggtgccggcaccggcggcg 471
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>gb|AE004483.1| Pseudomonas aeruginosa PAO1, section 44 of 529 of the complete genome
          Length = 10202

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 485  gccctggccgacgccgacttggtg 508
            |||||||||||||||||| |||||
Sbjct: 7681 gccctggccgacgccgacgtggtg 7704
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 351     ccggcaccggcggcggcgtc 370
               ||||||||||||||||||||
Sbjct: 2393493 ccggcaccggcggcggcgtc 2393474
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>dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0476C12
          Length = 157570

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 628   cctcgcgtcatctccgccgtcaccgtct 655
             ||||||| || |||||||||||||||||
Sbjct: 53686 cctcgcgccacctccgccgtcaccgtct 53659
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>gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 of 74 of the complete
              sequence
          Length = 308317

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 134    ccatcacacaaataatcaaa 153
              ||||||||||||||||||||
Sbjct: 127763 ccatcacacaaataatcaaa 127782
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>gb|AE003420.2| Drosophila melanogaster chromosome X, section 4 of 74 of the complete
              sequence
          Length = 308311

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 216    tctctgctctgctccgctcc 235
              ||||||||||||||||||||
Sbjct: 186797 tctctgctctgctccgctcc 186816
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>dbj|AB093554.1| Streptomyces laurentii plasmid pSLS DNA, complete sequence
          Length = 15397

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 660  tcttcggcgccgtgctcttc 679
            ||||||||||||||||||||
Sbjct: 4567 tcttcggcgccgtgctcttc 4586
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 659    ctcttcggcgccgtgctctt 678
              ||||||||||||||||||||
Sbjct: 786855 ctcttcggcgccgtgctctt 786874
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 350      gccggcaccggcggcggcgtccca 373
                |||||| |||||||||||||||||
Sbjct: 26224770 gccggcgccggcggcggcgtccca 26224747
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>emb|AL929186.7| Mouse DNA sequence from clone RP23-399K8 on chromosome 2, complete
              sequence
          Length = 198573

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    cacaacaaacattctatttc 181
              ||||||||||||||||||||
Sbjct: 102088 cacaacaaacattctatttc 102107
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>gb|DQ267625.1| Zea mays glycine rich protein 3 (Grp3) mRNA, Grp3-UH301 allele,
           complete cds
          Length = 1151

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 345 tcggtgccggcaccggcggcggcg 368
           ||||||||||||| ||||||||||
Sbjct: 708 tcggtgccggcactggcggcggcg 731


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,675,023
Number of Sequences: 3902068
Number of extensions: 5675023
Number of successful extensions: 109254
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108161
Number of HSP's gapped (non-prelim): 1088
length of query: 679
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 656
effective length of database: 17,143,297,704
effective search space: 11246003293824
effective search space used: 11246003293824
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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