ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd25m16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476018.1| Oryza sativa (japonica cultivar-group), predic... 432 e-118
2dbj|AK071333.1| Oryza sativa (japonica cultivar-group) cDNA clon... 432 e-118
3gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome... 127 5e-26
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
5emb|AL606970.12| Human DNA sequence from clone RP11-503C24 on ch... 42 2.1
6emb|BX544884.8| Zebrafish DNA sequence from clone DKEY-227M3 in ... 42 2.1
7dbj|AP003559.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.1
8dbj|AP003108.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.1
9gb|CP000081.1| Leishmania major chromosome 35, complete sequence 40 8.5
10ref|XM_589215.2| PREDICTED: Bos taurus similar to zinc finger pr... 40 8.5
11gb|AC147907.2| Xenopus tropicalis clone CH216-74C22, complete se... 40 8.5
12gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118... 40 8.5
13gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 8.5
14dbj|AB254371.1| Eukaryotic synthetic construct gene for pre-pro ... 40 8.5
15gb|AY122255.1| Drosophila melanogaster SD07027 full insert cDNA 40 8.5
16ref|NM_169228.1| Drosophila melanogaster CG31258-RA (CG31258), mRNA 40 8.5
17ref|NM_164365.1| Drosophila melanogaster CG4822-RC, transcript v... 40 8.5
18ref|NM_164364.2| Drosophila melanogaster CG4822-RB, transcript v... 40 8.5
19ref|NM_164363.1| Drosophila melanogaster CG4822-RA, transcript v... 40 8.5
20ref|NM_134649.4| Drosophila melanogaster CG4822-RD, transcript v... 40 8.5
21ref|NM_001038775.1| Drosophila melanogaster CG4822-RH, transcrip... 40 8.5
22ref|NM_001038774.1| Drosophila melanogaster CG4822-RG, transcrip... 40 8.5
23ref|NM_001038773.1| Drosophila melanogaster CG4822-RF, transcrip... 40 8.5
24ref|NM_001038772.1| Drosophila melanogaster CG4822-RE, transcrip... 40 8.5
25gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 2734... 40 8.5
26gb|AC007571.6| Drosophila melanogaster, chromosome 3R, region 85... 40 8.5
27gb|AC012646.6|AC012646 Drosophila melanogaster, chromosome 3R, r... 40 8.5
28gb|AC008318.7|AC008318 Drosophila melanogaster, chromosome 2L, r... 40 8.5
29dbj|AB011268.1| Hordeum vulgare hvnas5-2 mRNA for nicotianamine ... 40 8.5
30gb|BT003581.1| Drosophila melanogaster LD17329 full insert cDNA 40 8.5
31dbj|AB177531.1| Synthetic construct CLm gene for secreted lucife... 40 8.5
32dbj|AB005237.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.5
33gb|AE003679.2| Drosophila melanogaster chromosome 3R, section 17... 40 8.5
34gb|AE003590.3| Drosophila melanogaster chromosome 2L, section 1 ... 40 8.5
35gb|AC164567.5| Mus musculus BAC clone RP23-64B8 from chromosome ... 40 8.5
36emb|AM113472.1| Micromonospora sp. ML1 thiocoraline gene cluster 40 8.5
37dbj|AB011267.1| Hordeum vulgare hvnas5-1 mRNA for nicotianamine ... 40 8.5 
>ref|XM_476018.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1161

 Score =  432 bits (218), Expect = e-118
 Identities = 427/497 (85%)
 Strand = Plus / Minus

                                                                        
Query: 124  ggagtcgaccaacgcccagctccagccggtgcgcgcttcccagactgccgcatctcctgc 183
            ||||| ||||| |||||||||||||| | || ||||||||| || |||||||||||||| 
Sbjct: 1145 ggagttgaccatcgcccagctccagctgctgggcgcttccccgattgccgcatctcctgt 1086

                                                                        
Query: 184  gccttcgccagctgcgaggtcaggtccttttgcttgaacgagccgtccagagagtgcagg 243
            || || |||| ||||| |||||| |||||| | ||||| || || |||| |||||||| |
Sbjct: 1085 gctttggccaactgcgcggtcagatcctttggtttgaaggaaccatccaaagagtgcaag 1026

                                                                        
Query: 244  attgtgtcggcgagtccgtagtcgatggcctcctgtgcacggaagtaccttgggcctctc 303
            ||||| || || || || || |||||||||||||| ||||||||||||||||| ||| | 
Sbjct: 1025 attgtatctgcaagcccataatcgatggcctcctgcgcacggaagtaccttggacctttg 966

                                                                        
Query: 304  aggaattctgcgagctcttccttaggtttaccgactcccttggacacgagctccaggtag 363
            || || ||||||||||||||||| ||||| || ||||| || ||||  || || ||||||
Sbjct: 965  agaaactctgcgagctcttcctttggttttccaactccttttgacaacagttcaaggtag 906

                                                                        
Query: 364  tagtctgtgtttgtctccagctcttttgccttaatccacatatcaatggcagccccacca 423
            || || ||||| || || | ||||||||||||||||||||| ||||| ||||| ||||||
Sbjct: 905  taatccgtgttcgtgtctaactcttttgccttaatccacatgtcaatagcagctccacca 846

                                                                        
Query: 424  gatttgtggaccttgggcaggtgcagtttagttatcgaatttggtagcactcctctttta 483
            |||||||||||||| ||||||| ||||||||| || ||||||||||||||||||||||||
Sbjct: 845  gatttgtggaccttaggcaggtacagtttagtgattgaatttggtagcactcctctttta 786

                                                                        
Query: 484  cccttcatccccagggaaagaagcattgcagcctgaccatacgccatgctaagattgatg 543
            ||||| |  || ||||| ||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 785  cccttgacgccaagggacagaagcattgcagcctgaccatatgccatgctaagattgatt 726

                                                                        
Query: 544  gngtaaaccttagctttgcttcgattaatgaaatcagcaattgcataggcatcagtttca 603
            | ||| ||||| | |||||||||||| || ||||||||||||||| | ||||||||||||
Sbjct: 725  gtgtagaccttggatttgcttcgattgataaaatcagcaattgcaaatgcatcagtttca 666

                             
Query: 604  gatgcgaccagctcatt 620
            ||||| |||||||||||
Sbjct: 665  gatgcaaccagctcatt 649
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>dbj|AK071333.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091K09, full
            insert sequence
          Length = 1518

 Score =  432 bits (218), Expect = e-118
 Identities = 427/497 (85%)
 Strand = Plus / Minus

                                                                        
Query: 124  ggagtcgaccaacgcccagctccagccggtgcgcgcttcccagactgccgcatctcctgc 183
            ||||| ||||| |||||||||||||| | || ||||||||| || |||||||||||||| 
Sbjct: 1196 ggagttgaccatcgcccagctccagctgctgggcgcttccccgattgccgcatctcctgt 1137

                                                                        
Query: 184  gccttcgccagctgcgaggtcaggtccttttgcttgaacgagccgtccagagagtgcagg 243
            || || |||| ||||| |||||| |||||| | ||||| || || |||| |||||||| |
Sbjct: 1136 gctttggccaactgcgcggtcagatcctttggtttgaaggaaccatccaaagagtgcaag 1077

                                                                        
Query: 244  attgtgtcggcgagtccgtagtcgatggcctcctgtgcacggaagtaccttgggcctctc 303
            ||||| || || || || || |||||||||||||| ||||||||||||||||| ||| | 
Sbjct: 1076 attgtatctgcaagcccataatcgatggcctcctgcgcacggaagtaccttggacctttg 1017

                                                                        
Query: 304  aggaattctgcgagctcttccttaggtttaccgactcccttggacacgagctccaggtag 363
            || || ||||||||||||||||| ||||| || ||||| || ||||  || || ||||||
Sbjct: 1016 agaaactctgcgagctcttcctttggttttccaactccttttgacaacagttcaaggtag 957

                                                                        
Query: 364  tagtctgtgtttgtctccagctcttttgccttaatccacatatcaatggcagccccacca 423
            || || ||||| || || | ||||||||||||||||||||| ||||| ||||| ||||||
Sbjct: 956  taatccgtgttcgtgtctaactcttttgccttaatccacatgtcaatagcagctccacca 897

                                                                        
Query: 424  gatttgtggaccttgggcaggtgcagtttagttatcgaatttggtagcactcctctttta 483
            |||||||||||||| ||||||| ||||||||| || ||||||||||||||||||||||||
Sbjct: 896  gatttgtggaccttaggcaggtacagtttagtgattgaatttggtagcactcctctttta 837

                                                                        
Query: 484  cccttcatccccagggaaagaagcattgcagcctgaccatacgccatgctaagattgatg 543
            ||||| |  || ||||| ||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 836  cccttgacgccaagggacagaagcattgcagcctgaccatatgccatgctaagattgatt 777

                                                                        
Query: 544  gngtaaaccttagctttgcttcgattaatgaaatcagcaattgcataggcatcagtttca 603
            | ||| ||||| | |||||||||||| || ||||||||||||||| | ||||||||||||
Sbjct: 776  gtgtagaccttggatttgcttcgattgataaaatcagcaattgcaaatgcatcagtttca 717

                             
Query: 604  gatgcgaccagctcatt 620
            ||||| |||||||||||
Sbjct: 716  gatgcaaccagctcatt 700
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>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
             complete sequence
          Length = 142196

 Score =  127 bits (64), Expect = 5e-26
 Identities = 96/107 (89%)
 Strand = Plus / Plus

                                                                         
Query: 460   gaatttggtagcactcctcttttacccttcatccccagggaaagaagcattgcagcctga 519
             ||||||||||||||||||||||||||||| |  || ||||| ||||||||||||||||||
Sbjct: 55222 gaatttggtagcactcctcttttacccttgacgccaagggacagaagcattgcagcctga 55281

                                                            
Query: 520   ccatacgccatgctaagattgatggngtaaaccttagctttgcttcg 566
             ||||| ||||||||||||||||| | ||| ||||| | |||||||||
Sbjct: 55282 ccatatgccatgctaagattgattgtgtagaccttggatttgcttcg 55328



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 137/166 (82%)
 Strand = Plus / Plus

                                                                         
Query: 229   tccagagagtgcaggattgtgtcggcgagtccgtagtcgatggcctcctgtgcacggaag 288
             |||| |||||||| |||||| || || || || || |||||||||||||| |||||||||
Sbjct: 54777 tccaaagagtgcaagattgtatctgcaagcccataatcgatggcctcctgcgcacggaag 54836

                                                                         
Query: 289   taccttgggcctctcaggaattctgcgagctcttccttaggtttaccgactcccttggac 348
             |||||||| ||| | || || ||||||||||||||||| ||||| || ||||| || |||
Sbjct: 54837 taccttggacctttgagaaactctgcgagctcttcctttggttttccaactccttttgac 54896

                                                           
Query: 349   acgagctccaggtagtagtctgtgtttgtctccagctcttttgcct 394
             |  || || |||||||| || ||||| || || | |||||||||||
Sbjct: 54897 aacagttcaaggtagtaatccgtgttcgtgtctaactcttttgcct 54942



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 58/63 (92%)
 Strand = Plus / Plus

                                                                         
Query: 392   ccttaatccacatatcaatggcagccccaccagatttgtggaccttgggcaggtgcagtt 451
             ||||||||||||| ||||| ||||| |||||||||||||||||||| ||||||| |||||
Sbjct: 55048 ccttaatccacatgtcaatagcagctccaccagatttgtggaccttaggcaggtacagtt 55107

                
Query: 452   tag 454
             |||
Sbjct: 55108 tag 55110



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/88 (85%)
 Strand = Plus / Plus

                                                                         
Query: 124   ggagtcgaccaacgcccagctccagccggtgcgcgcttcccagactgccgcatctcctgc 183
             ||||| ||||| |||||||||||||| | || ||||||||| || |||||||||||||| 
Sbjct: 54589 ggagttgaccatcgcccagctccagctgctgggcgcttccccgattgccgcatctcctgt 54648

                                         
Query: 184   gccttcgccagctgcgaggtcaggtcct 211
             || || |||| ||||| |||||| ||||
Sbjct: 54649 gctttggccaactgcgcggtcagatcct 54676



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                            
Query: 574   aaatcagcaattgcataggcatcagtttcagatgcgaccagctcatt 620
             ||||||||||||||| | ||||||||||||||||| |||||||||||
Sbjct: 55961 aaatcagcaattgcaaatgcatcagtttcagatgcaaccagctcatt 56007
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  127 bits (64), Expect = 5e-26
 Identities = 96/107 (89%)
 Strand = Plus / Plus

                                                                            
Query: 460      gaatttggtagcactcctcttttacccttcatccccagggaaagaagcattgcagcctga 519
                ||||||||||||||||||||||||||||| |  || ||||| ||||||||||||||||||
Sbjct: 29276565 gaatttggtagcactcctcttttacccttgacgccaagggacagaagcattgcagcctga 29276624

                                                               
Query: 520      ccatacgccatgctaagattgatggngtaaaccttagctttgcttcg 566
                ||||| ||||||||||||||||| | ||| ||||| | |||||||||
Sbjct: 29276625 ccatatgccatgctaagattgattgtgtagaccttggatttgcttcg 29276671



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 137/166 (82%)
 Strand = Plus / Plus

                                                                            
Query: 229      tccagagagtgcaggattgtgtcggcgagtccgtagtcgatggcctcctgtgcacggaag 288
                |||| |||||||| |||||| || || || || || |||||||||||||| |||||||||
Sbjct: 29276120 tccaaagagtgcaagattgtatctgcaagcccataatcgatggcctcctgcgcacggaag 29276179

                                                                            
Query: 289      taccttgggcctctcaggaattctgcgagctcttccttaggtttaccgactcccttggac 348
                |||||||| ||| | || || ||||||||||||||||| ||||| || ||||| || |||
Sbjct: 29276180 taccttggacctttgagaaactctgcgagctcttcctttggttttccaactccttttgac 29276239

                                                              
Query: 349      acgagctccaggtagtagtctgtgtttgtctccagctcttttgcct 394
                |  || || |||||||| || ||||| || || | |||||||||||
Sbjct: 29276240 aacagttcaaggtagtaatccgtgttcgtgtctaactcttttgcct 29276285



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 58/63 (92%)
 Strand = Plus / Plus

                                                                            
Query: 392      ccttaatccacatatcaatggcagccccaccagatttgtggaccttgggcaggtgcagtt 451
                ||||||||||||| ||||| ||||| |||||||||||||||||||| ||||||| |||||
Sbjct: 29276391 ccttaatccacatgtcaatagcagctccaccagatttgtggaccttaggcaggtacagtt 29276450

                   
Query: 452      tag 454
                |||
Sbjct: 29276451 tag 29276453



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/88 (85%)
 Strand = Plus / Plus

                                                                            
Query: 124      ggagtcgaccaacgcccagctccagccggtgcgcgcttcccagactgccgcatctcctgc 183
                ||||| ||||| |||||||||||||| | || ||||||||| || |||||||||||||| 
Sbjct: 29275932 ggagttgaccatcgcccagctccagctgctgggcgcttccccgattgccgcatctcctgt 29275991

                                            
Query: 184      gccttcgccagctgcgaggtcaggtcct 211
                || || |||| ||||| |||||| ||||
Sbjct: 29275992 gctttggccaactgcgcggtcagatcct 29276019



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                               
Query: 574      aaatcagcaattgcataggcatcagtttcagatgcgaccagctcatt 620
                ||||||||||||||| | ||||||||||||||||| |||||||||||
Sbjct: 29277304 aaatcagcaattgcaaatgcatcagtttcagatgcaaccagctcatt 29277350
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>emb|AL606970.12| Human DNA sequence from clone RP11-503C24 on chromosome 6 Contains the
             3' end of a novel gene, up to five novel genes, (inclusing
             FLJ31232 and pp13671), a meningioma expressed antigen 6
             (coiled-coil proline-rich) (MGEA6) pseudogene and three
             CpG islands, complete sequence
          Length = 161863

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 567   attaatgaaatcagcaattgc 587
             |||||||||||||||||||||
Sbjct: 73118 attaatgaaatcagcaattgc 73098
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>emb|BX544884.8| Zebrafish DNA sequence from clone DKEY-227M3 in linkage group 8, complete
              sequence
          Length = 160755

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 22     aacatacagctgctgcacact 42
              |||||||||||||||||||||
Sbjct: 119557 aacatacagctgctgcacact 119577
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>dbj|AP003559.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-794G24, complete
             sequence
          Length = 181439

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 287   agtaccttgggcctctcagga 307
             |||||||||||||||||||||
Sbjct: 79413 agtaccttgggcctctcagga 79433
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>dbj|AP003108.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-286N22, complete
              sequence
          Length = 209572

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 287    agtaccttgggcctctcagga 307
              |||||||||||||||||||||
Sbjct: 157752 agtaccttgggcctctcagga 157772
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>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 497     gggaaagaagcattgcagcc 516
               ||||||||||||||||||||
Sbjct: 1210331 gggaaagaagcattgcagcc 1210350
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>ref|XM_589215.2| PREDICTED: Bos taurus similar to zinc finger protein 648
           (LOC539756), mRNA
          Length = 1695

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 276 ctgtgcacggaagtaccttg 295
           ||||||||||||||||||||
Sbjct: 543 ctgtgcacggaagtaccttg 524
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>gb|AC147907.2| Xenopus tropicalis clone CH216-74C22, complete sequence
          Length = 184109

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 433  accttgggcaggtgcagttt 452
            ||||||||||||||||||||
Sbjct: 5183 accttgggcaggtgcagttt 5164
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>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 578    cagcaattgcataggcatca 597
              ||||||||||||||||||||
Sbjct: 205867 cagcaattgcataggcatca 205848
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 139     ccagctccagccggtgcgcg 158
               ||||||||||||||||||||
Sbjct: 1466721 ccagctccagccggtgcgcg 1466702
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>dbj|AB254371.1| Eukaryotic synthetic construct gene for pre-pro luciferase with
            histidine-tag, complete cds
          Length = 1911

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 174  catctcctgcgccttcgccagctg 197
            ||||||||||||||||||| ||||
Sbjct: 1059 catctcctgcgccttcgcccgctg 1082
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>gb|AY122255.1| Drosophila melanogaster SD07027 full insert cDNA
          Length = 4256

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 244  attgtgtcggcgagtccgtagtcg 267
            |||||||||||| |||||||||||
Sbjct: 3742 attgtgtcggcgcgtccgtagtcg 3719
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>ref|NM_169228.1| Drosophila melanogaster CG31258-RA (CG31258), mRNA
          Length = 4329

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 409  atggcagccccaccagattt 428
            ||||||||||||||||||||
Sbjct: 2194 atggcagccccaccagattt 2213
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>ref|NM_164365.1| Drosophila melanogaster CG4822-RC, transcript variant C (CG4822),
            mRNA
          Length = 2853

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 244  attgtgtcggcgagtccgtagtcg 267
            |||||||||||| |||||||||||
Sbjct: 2357 attgtgtcggcgcgtccgtagtcg 2334
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>ref|NM_164364.2| Drosophila melanogaster CG4822-RB, transcript variant B (CG4822),
            mRNA
          Length = 4228

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 244  attgtgtcggcgagtccgtagtcg 267
            |||||||||||| |||||||||||
Sbjct: 3732 attgtgtcggcgcgtccgtagtcg 3709
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>ref|NM_164363.1| Drosophila melanogaster CG4822-RA, transcript variant A (CG4822),
            mRNA
          Length = 2453

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 244  attgtgtcggcgagtccgtagtcg 267
            |||||||||||| |||||||||||
Sbjct: 1957 attgtgtcggcgcgtccgtagtcg 1934
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>ref|NM_134649.4| Drosophila melanogaster CG4822-RD, transcript variant D (CG4822),
            mRNA
          Length = 2656

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 244  attgtgtcggcgagtccgtagtcg 267
            |||||||||||| |||||||||||
Sbjct: 2160 attgtgtcggcgcgtccgtagtcg 2137
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>ref|NM_001038775.1| Drosophila melanogaster CG4822-RH, transcript variant H (CG4822),
            mRNA
          Length = 2711

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 244  attgtgtcggcgagtccgtagtcg 267
            |||||||||||| |||||||||||
Sbjct: 2215 attgtgtcggcgcgtccgtagtcg 2192
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>ref|NM_001038774.1| Drosophila melanogaster CG4822-RG, transcript variant G (CG4822),
            mRNA
          Length = 2708

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 244  attgtgtcggcgagtccgtagtcg 267
            |||||||||||| |||||||||||
Sbjct: 2212 attgtgtcggcgcgtccgtagtcg 2189
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>ref|NM_001038773.1| Drosophila melanogaster CG4822-RF, transcript variant F (CG4822),
            mRNA
          Length = 2996

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 244  attgtgtcggcgagtccgtagtcg 267
            |||||||||||| |||||||||||
Sbjct: 2500 attgtgtcggcgcgtccgtagtcg 2477
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>ref|NM_001038772.1| Drosophila melanogaster CG4822-RE, transcript variant E (CG4822),
            mRNA
          Length = 2751

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 244  attgtgtcggcgagtccgtagtcg 267
            |||||||||||| |||||||||||
Sbjct: 2255 attgtgtcggcgcgtccgtagtcg 2232
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>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome
          Length = 1010023

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 567    attaatgaaatcagcaattg 586
              ||||||||||||||||||||
Sbjct: 144533 attaatgaaatcagcaattg 144514
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>gb|AC007571.6| Drosophila melanogaster, chromosome 3R, region 85A1-85A10, BAC clone
              BACR48A14, complete sequence
          Length = 188337

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 409    atggcagccccaccagattt 428
              ||||||||||||||||||||
Sbjct: 104844 atggcagccccaccagattt 104825
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>gb|AC012646.6|AC012646 Drosophila melanogaster, chromosome 3R, region 85A-85B, BAC clone
             BACR03F16, complete sequence
          Length = 204681

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 409   atggcagccccaccagattt 428
             ||||||||||||||||||||
Sbjct: 21061 atggcagccccaccagattt 21042
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>gb|AC008318.7|AC008318 Drosophila melanogaster, chromosome 2L, region 21A-21A, BAC clone
              BACR09J20, complete sequence
          Length = 166626

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 244    attgtgtcggcgagtccgtagtcg 267
              |||||||||||| |||||||||||
Sbjct: 108217 attgtgtcggcgcgtccgtagtcg 108240
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>dbj|AB011268.1| Hordeum vulgare hvnas5-2 mRNA for nicotianamine Synthase 5-2,
           complete cds
          Length = 1021

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 168 ctgccgcatctcctgcgcct 187
           ||||||||||||||||||||
Sbjct: 200 ctgccgcatctcctgcgcct 181
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>gb|BT003581.1| Drosophila melanogaster LD17329 full insert cDNA
          Length = 2968

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 409  atggcagccccaccagattt 428
            ||||||||||||||||||||
Sbjct: 2230 atggcagccccaccagattt 2249
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>dbj|AB177531.1| Synthetic construct CLm gene for secreted luciferase, complete cds
          Length = 1662

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 174 catctcctgcgccttcgccagctg 197
           ||||||||||||||||||| ||||
Sbjct: 846 catctcctgcgccttcgcccgctg 869
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>dbj|AB005237.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJJ3
          Length = 87835

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 547   taaaccttagctttgcttcg 566
             ||||||||||||||||||||
Sbjct: 10864 taaaccttagctttgcttcg 10883
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>gb|AE003679.2| Drosophila melanogaster chromosome 3R, section 17 of 118 of the complete
              sequence
          Length = 216994

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 409    atggcagccccaccagattt 428
              ||||||||||||||||||||
Sbjct: 122686 atggcagccccaccagattt 122705
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>gb|AE003590.3| Drosophila melanogaster chromosome 2L, section 1 of 83 of the complete
              sequence
          Length = 305900

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 244    attgtgtcggcgagtccgtagtcg 267
              |||||||||||| |||||||||||
Sbjct: 117575 attgtgtcggcgcgtccgtagtcg 117598
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>gb|AC164567.5| Mus musculus BAC clone RP23-64B8 from chromosome 10, complete sequence
          Length = 262262

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 434    ccttgggcaggtgcagttta 453
              ||||||||||||||||||||
Sbjct: 146401 ccttgggcaggtgcagttta 146420
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>emb|AM113472.1| Micromonospora sp. ML1 thiocoraline gene cluster
          Length = 64650

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   ccggtgcgcgcttcccagac 168
             ||||||||||||||||||||
Sbjct: 14476 ccggtgcgcgcttcccagac 14495
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>dbj|AB011267.1| Hordeum vulgare hvnas5-1 mRNA for nicotianamine synthase 5-1,
           complete cds
          Length = 1106

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 168 ctgccgcatctcctgcgcct 187
           ||||||||||||||||||||
Sbjct: 329 ctgccgcatctcctgcgcct 310


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,441,644
Number of Sequences: 3902068
Number of extensions: 4441644
Number of successful extensions: 73183
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73061
Number of HSP's gapped (non-prelim): 122
length of query: 622
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 599
effective length of database: 17,143,297,704
effective search space: 10268835324696
effective search space used: 10268835324696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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