ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd26b15 |
|---|---|
| Clone Library Name | barley_pub |
>SYP51_ARATH (Q9SA23) Syntaxin-51 (AtSYP51)| Length = 232 Score = 158 bits (400), Expect = 1e-38 Identities = 80/111 (72%), Positives = 92/111 (82%) Frame = -2 Query: 608 ANRKDLLGQSKKAADDMSRVAGLDNQGIVGLQRQVMREQDEGLERLEETVLSTKHIALAV 429 ANR LLG K D MSRV G+DNQGIVG QRQVMREQDEGLE+LE TV+STKHIALAV Sbjct: 104 ANRDSLLGPDIKPDDSMSRVTGMDNQGIVGYQRQVMREQDEGLEQLEGTVMSTKHIALAV 163 Query: 428 NEELTLHTRLIDDLEDHVDVTNSRLQRVQKRLAILNKRAKGGCSCMCLMLS 276 +EEL L TRLIDDL+ HVDVT+SRL+RVQK LA++NK + GCSCM ++LS Sbjct: 164 SEELDLQTRLIDDLDYHVDVTDSRLRRVQKSLAVMNKNMRSGCSCMSMLLS 214
>SYP52_ARATH (Q94KK7) Syntaxin-52 (AtSYP52)| Length = 233 Score = 155 bits (392), Expect = 9e-38 Identities = 81/129 (62%), Positives = 96/129 (74%) Frame = -2 Query: 608 ANRKDLLGQSKKAADDMSRVAGLDNQGIVGLQRQVMREQDEGLERLEETVLSTKHIALAV 429 ANR L G K D ++RV+G+DNQGIV QRQVMREQDEGLE+LEETV+STKHIALAV Sbjct: 105 ANRDSLFGTDLKPDDAINRVSGMDNQGIVVFQRQVMREQDEGLEKLEETVMSTKHIALAV 164 Query: 428 NEELTLHTRLIDDLEDHVDVTNSRLQRVQKRLAILNKRAKGGCSCMCLMLSXXXXXXXXX 249 NEELTL TRLIDDL+ VD+T+SRL+RVQK LA++NK K GCSCM ++LS Sbjct: 165 NEELTLQTRLIDDLDYDVDITDSRLRRVQKSLALMNKSMKSGCSCMSMLLSVLGIVGLAL 224 Query: 248 XXXXXIKYL 222 +KYL Sbjct: 225 VIWLLVKYL 233
>SYP61_ARATH (Q946Y7) Syntaxin-61 (AtSYP61) (Osmotic stress-sensitive mutant 1)| Length = 245 Score = 56.2 bits (134), Expect = 7e-08 Identities = 32/103 (31%), Positives = 58/103 (56%), Gaps = 6/103 (5%) Frame = -2 Query: 569 ADDMSRVAGLDNQGIV----GLQRQVMREQDEGLERLEETVLSTKHIALAVNEELTLHTR 402 A + G D+ G V Q ++++QDE L+ L ++V + L +++EL R Sbjct: 130 ASRYDQYGGRDDDGFVQSESDRQMLLIKQQDEELDELSKSVQRIGGVGLTIHDELVAQER 189 Query: 401 LIDDLEDHVDVTNSRLQRVQKRLAILNKR--AKGGCSCMCLML 279 +ID+L+ +D T +RL+ VQK++ ++ K+ AKG +C +L Sbjct: 190 IIDELDTEMDSTKNRLEFVQKKVGMVMKKAGAKGQMMMICFLL 232
>VAM7_YEAST (P32912) Vacuolar morphogenesis protein VAM7| Length = 316 Score = 52.0 bits (123), Expect = 1e-06 Identities = 32/98 (32%), Positives = 48/98 (48%) Frame = -2 Query: 605 NRKDLLGQSKKAADDMSRVAGLDNQGIVGLQRQVMREQDEGLERLEETVLSTKHIALAVN 426 +R LLG + + V G N + Q Q++R+Q++ L L + + + +AL +N Sbjct: 219 DRGRLLGVATSDNSSTTEVQGRTNNDLQQGQMQMVRDQEQELVALHRIIQAQRGLALEMN 278 Query: 425 EELTLHTRLIDDLEDHVDVTNSRLQRVQKRLAILNKRA 312 EEL L+ LED VD T RLQ K+ N A Sbjct: 279 EELQTQNELLTALEDDVDNTGRRLQIANKKARHFNNSA 316
>TLG1_SCHPO (Q9HGN3) t-SNARE affecting a late Golgi compartment protein 1| (Syntaxin tlg1) Length = 225 Score = 45.8 bits (107), Expect = 1e-04 Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 3/82 (3%) Frame = -2 Query: 515 QRQVMREQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQRVQKR 336 Q Q+ ++QD L+ + +T+ + + A + EEL L+D L++ ++ TNS+L+R KR Sbjct: 132 QEQLYQQQDVMLDGVYDTIGNIRGQAALMGEELGQQADLLDTLDNSIETTNSKLRRGMKR 191 Query: 335 L---AILNKRAKGGCSCMCLML 279 L I + +K GC L++ Sbjct: 192 LKDFTIASADSKSGCCITVLII 213
>STX5_CAEEL (P83528) Putative syntaxin C15C7.1| Length = 122 Score = 45.1 bits (105), Expect = 2e-04 Identities = 28/108 (25%), Positives = 56/108 (51%) Frame = -2 Query: 602 RKDLLGQSKKAADDMSRVAGLDNQGIVGLQRQVMREQDEGLERLEETVLSTKHIALAVNE 423 R L + + + +DM A NQ I+ Q Q+++EQD+ LE + +V + + ++ + + Sbjct: 5 RYSKLNEEEISLEDMPSSA---NQ-ILTRQEQIIQEQDDELELVGNSVRTLRGMSSMIGD 60 Query: 422 ELTLHTRLIDDLEDHVDVTNSRLQRVQKRLAILNKRAKGGCSCMCLML 279 EL + ++DDL ++ + +RL K++A L C +M+ Sbjct: 61 ELDQQSTMLDDLGQEMEYSETRLDTAMKKMAKLTHLEDESSQCKMIMV 108
>STX8_RAT (Q9Z2Q7) Syntaxin-8| Length = 236 Score = 44.7 bits (104), Expect = 2e-04 Identities = 24/96 (25%), Positives = 51/96 (53%) Frame = -2 Query: 566 DDMSRVAGLDNQGIVGLQRQVMREQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDL 387 ++ GL I Q+++++EQD GL+ L + K + + EL +IDDL Sbjct: 127 EEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDL 186 Query: 386 EDHVDVTNSRLQRVQKRLAILNKRAKGGCSCMCLML 279 + V+ T+ +L+ +R+ ++++++ SC +M+ Sbjct: 187 ANLVENTDEKLRTEARRVTLVDRKS---ASCGMIMV 219
>STX8_MOUSE (O88983) Syntaxin-8 (Syntaxin-like protein 3I35)| Length = 236 Score = 44.7 bits (104), Expect = 2e-04 Identities = 23/96 (23%), Positives = 50/96 (52%) Frame = -2 Query: 566 DDMSRVAGLDNQGIVGLQRQVMREQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDL 387 ++ GL I Q+++++EQD GL+ L + K + + EL +IDDL Sbjct: 127 EEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDL 186 Query: 386 EDHVDVTNSRLQRVQKRLAILNKRAKGGCSCMCLML 279 + V+ T+ +L+ +R+ ++++++ M ++L Sbjct: 187 ANLVENTDEKLRTEARRVTLVDRKSTSCGMIMVILL 222
>STX8_HUMAN (Q9UNK0) Syntaxin-8| Length = 236 Score = 43.9 bits (102), Expect = 4e-04 Identities = 24/96 (25%), Positives = 51/96 (53%) Frame = -2 Query: 566 DDMSRVAGLDNQGIVGLQRQVMREQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDL 387 ++ GL I Q+++++EQD GL+ L + K + + EL +IDDL Sbjct: 127 EEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDL 186 Query: 386 EDHVDVTNSRLQRVQKRLAILNKRAKGGCSCMCLML 279 + V+ T+ +L+ +R+ ++++++ SC +M+ Sbjct: 187 ANLVENTDEKLRNETRRVNMVDRKS---ASCGMIMV 219
>FSV1_SCHPO (O14222) Syntaxin-like protein fsv1| Length = 247 Score = 43.9 bits (102), Expect = 4e-04 Identities = 22/80 (27%), Positives = 43/80 (53%) Frame = -2 Query: 518 LQRQVMREQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQRVQK 339 + +Q++ EQ+E L +E +V K + A+N EL+ L+D++ + D R + Sbjct: 157 MHQQMLNEQEESLGGIEASVQRQKRMGYAMNTELSEQNVLLDNMNNDADRIERRFDHAKN 216 Query: 338 RLAILNKRAKGGCSCMCLML 279 RL ++++AK C ++L Sbjct: 217 RLNKVSRKAKQYPRCFIILL 236
>STX6_CHICK (Q5ZL19) Syntaxin-6| Length = 254 Score = 41.6 bits (96), Expect = 0.002 Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 12/104 (11%) Frame = -2 Query: 605 NRKDLLGQSKKAA--------DDMSRVAGLDNQGIV----GLQRQVMREQDEGLERLEET 462 NR+ LLG+S + + R L N + Q+ ++ +QDE LE + + Sbjct: 119 NRQALLGESSSQSWSSGPDKYSRLDRELQLANSHFIEEQQAQQQLIVEQQDEQLELVSGS 178 Query: 461 VLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQRVQKRLA 330 + K+++ + EL ++DD +D T+SRL V K+LA Sbjct: 179 IGVLKNMSQRIGGELEEQAVMLDDFSHELDSTHSRLDNVMKKLA 222
>STX10_HUMAN (O60499) Syntaxin-10 (Syn10)| Length = 249 Score = 39.3 bits (90), Expect = 0.009 Identities = 21/62 (33%), Positives = 35/62 (56%) Frame = -2 Query: 515 QRQVMREQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQRVQKR 336 Q+ +M EQD+ LE + ++ KH++ V EEL ++D +D T SR+ V ++ Sbjct: 156 QQLIMDEQDQQLEMVSGSIQVLKHMSGRVGEELDEQGIMLDAFAQEMDHTQSRMDGVLRK 215 Query: 335 LA 330 LA Sbjct: 216 LA 217
>SYP72_ARATH (Q94KK6) Syntaxin-72 (AtSYP72)| Length = 267 Score = 38.9 bits (89), Expect = 0.012 Identities = 20/56 (35%), Positives = 34/56 (60%) Frame = -2 Query: 500 REQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQRVQKRL 333 ++QDEGL+ + E + + K++A +NEEL L++++E VD S L+ RL Sbjct: 177 KKQDEGLDIISEGLDALKNLARDMNEELDKQVPLMEEMETKVDGATSDLKNTNVRL 232
>STX6_RAT (Q63635) Syntaxin-6| Length = 255 Score = 38.9 bits (89), Expect = 0.012 Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 13/105 (12%) Frame = -2 Query: 605 NRKDLLGQSKKAADD---------MSRVAGLDNQGIV----GLQRQVMREQDEGLERLEE 465 NR+ LLG S D + R L N + Q+ ++ +QDE LE + Sbjct: 119 NRQALLGDSSSQNWDAGVTDRYGRLDRELQLANSHFIEEQQAQQQLIVEQQDEQLELVSG 178 Query: 464 TVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQRVQKRLA 330 ++ K+++ + EL ++DD ++ T SRL V K+LA Sbjct: 179 SIGVLKNMSQRIGGELEEQAVMLDDFSHELESTQSRLDNVMKKLA 223
>STX6_MOUSE (Q9JKK1) Syntaxin-6| Length = 255 Score = 38.5 bits (88), Expect = 0.015 Identities = 19/62 (30%), Positives = 35/62 (56%) Frame = -2 Query: 515 QRQVMREQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQRVQKR 336 Q+ ++ +QDE LE + ++ K+++ + EL ++DD ++ T SRL V K+ Sbjct: 162 QQLIVEQQDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLDDFSHELESTQSRLDNVMKK 221 Query: 335 LA 330 LA Sbjct: 222 LA 223
>SNP30_ARATH (Q9LMG8) Putative SNAP25 homologous protein SNAP30 (AtSNAP30)| (Synaptosomal-associated protein SNAP25-like 3) Length = 263 Score = 37.0 bits (84), Expect = 0.045 Identities = 19/58 (32%), Positives = 31/58 (53%) Frame = -2 Query: 509 QVMREQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQRVQKR 336 Q +QD+GL L + + K +A+ + E+ + +D L D VD NSR+Q +R Sbjct: 199 QEKAKQDDGLSDLSDILGDLKSMAVDMGSEIDKQNKALDHLGDDVDELNSRVQGANQR 256
>SYP71_ARATH (Q9SF29) Syntaxin-71 (AtSYP71)| Length = 266 Score = 36.2 bits (82), Expect = 0.077 Identities = 18/55 (32%), Positives = 33/55 (60%) Frame = -2 Query: 497 EQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQRVQKRL 333 +Q++GL+ + E + + K++A +NEEL L+D+++ VD S L+ RL Sbjct: 177 KQEQGLDMISEGLDALKNMASDMNEELDRQVPLMDEIDTKVDRATSDLKNTNVRL 231
>BET12_ARATH (Q94CG2) Bet1-like SNARE 1-2 (AtBET12) (Bet1/Sft1-like SNARE 14b)| (AtBS14b) Length = 130 Score = 36.2 bits (82), Expect = 0.077 Identities = 18/69 (26%), Positives = 34/69 (49%) Frame = -2 Query: 500 REQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQRVQKRLAILN 321 R+ DE LE L++ V K + ++EE+ H RL+D + + +D + R ++ Sbjct: 37 RDNDEALENLQDRVSFLKRVTGDIHEEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVF 96 Query: 320 KRAKGGCSC 294 ++ SC Sbjct: 97 EKKSNRKSC 105
>SYP22_ARATH (P93654) Syntaxin-22 (AtSYP22) (AtVAM3)| Length = 268 Score = 35.8 bits (81), Expect = 0.10 Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 4/92 (4%) Frame = -2 Query: 542 LDNQGIVGLQRQVMREQDEGLERLEETVLST----KHIALAVNEELTLHTRLIDDLEDHV 375 LDN+ + V+ E+++G++ + + + K +A+ VN++ + IDD+ H+ Sbjct: 167 LDNE--IAFNEAVIEEREQGIQEIHQQIGEVNEIFKDLAVLVNDQGVM----IDDIGTHI 220 Query: 374 DVTNSRLQRVQKRLAILNKRAKGGCSCMCLML 279 D + + + + +L K K S CL+L Sbjct: 221 DNSRAATSQGKSQLVQAAKTQKSNSSLTCLLL 252
>TLG1_YEAST (Q03322) T-SNARE affecting a late Golgi compartment protein 1| (Syntaxin TLG1) Length = 224 Score = 35.4 bits (80), Expect = 0.13 Identities = 20/79 (25%), Positives = 45/79 (56%) Frame = -2 Query: 515 QRQVMREQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQRVQKR 336 Q Q++REQD L+ + +T+ + A + +EL +L+D++++ +D ++L R +++ Sbjct: 131 QEQMLREQDVHLDGIHKTMQNLHIQAQTMGDELENQGQLLDNMDEGMDGVVNKLARGRRQ 190 Query: 335 LAILNKRAKGGCSCMCLML 279 L + ++ K C+ L Sbjct: 191 LEWVYEKNKEKYDDCCIGL 209
>DPO4_CLOPE (Q8XK37) DNA polymerase IV (EC 2.7.7.7) (Pol IV)| Length = 359 Score = 35.4 bits (80), Expect = 0.13 Identities = 25/97 (25%), Positives = 52/97 (53%) Frame = -2 Query: 599 KDLLGQSKKAADDMSRVAGLDNQGIVGLQRQVMREQDEGLERLEETVLSTKHIALAVNEE 420 +DLLG S+K + GI+G + +++ E G++ + ++ I ++ +E Sbjct: 204 EDLLGFSEK-----------ELIGILGDRGKILYEFARGIDNRQ---VNPYRIRKSIGKE 249 Query: 419 LTLHTRLIDDLEDHVDVTNSRLQRVQKRLAILNKRAK 309 +TL I+D+E+ +++ +RV + L +LNK+ K Sbjct: 250 ITLRED-IEDIEEMIEILEKISERVSESLCLLNKKGK 285
>SNP33_ARATH (Q9S7P9) SNAP25 homologous protein SNAP33 (AtSNAP33)| (Synaptosomal-associated protein SNAP25-like 1) (SNAP-25-like protein 1) (Snap25a) Length = 300 Score = 35.0 bits (79), Expect = 0.17 Identities = 17/54 (31%), Positives = 31/54 (57%) Frame = -2 Query: 497 EQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQRVQKR 336 +QD+GL L + + K++A+ + E+ + +D L D VD N R+Q+ +R Sbjct: 240 KQDDGLSDLSDILGELKNMAVDMGSEIEKQNKGLDHLHDDVDELNFRVQQSNQR 293
>SYP21_ARATH (Q39233) Syntaxin-21 (AtSYP21) (PEP12 homolog) (AtPEP12) (aPEP12)| Length = 279 Score = 34.7 bits (78), Expect = 0.22 Identities = 25/116 (21%), Positives = 59/116 (50%), Gaps = 6/116 (5%) Frame = -2 Query: 608 ANRKDLLGQSKKAADDMSRVAGLDNQGIVGLQRQVMREQDEGLERLEETVLST----KHI 441 + ++ LL QS++ V LDN+ + ++ E+++G+ +E+ + K + Sbjct: 161 SQQQALLLQSRR-----QEVVFLDNE--ITFNEAIIEEREQGIREIEDQIRDVNGMFKDL 213 Query: 440 ALAVNEELTLHTRLIDDLEDHVDVTNSRLQR--VQKRLAILNKRAKGGCSCMCLML 279 AL VN + ++DD+ ++D +++ + VQ R A +R+ +C+ +++ Sbjct: 214 ALMVNHQ----GNIVDDISSNLDNSHAATTQATVQLRKAAKTQRSNSSLTCLLILI 265
>SEC9_CANGA (Q6FY22) Protein transport protein SEC9| Length = 694 Score = 33.5 bits (75), Expect = 0.50 Identities = 18/56 (32%), Positives = 30/56 (53%) Frame = -2 Query: 497 EQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQRVQKRLA 330 E D L+++++ K +ALA EEL R I D+E++ D + ++ RLA Sbjct: 636 EIDRNLDKIQQISGRLKKLALATGEELDSQQRRIRDIEENTDEMDIKIHMNTTRLA 691
>BET11_ARATH (Q9M2J9) Bet1-like SNARE 1-1 (AtBET11) (Bet1/Sft1-like SNARE 14a)| (AtBS14a) Length = 122 Score = 33.1 bits (74), Expect = 0.65 Identities = 15/54 (27%), Positives = 29/54 (53%) Frame = -2 Query: 497 EQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQRVQKR 336 E + LE L++ V+ K ++ +NEE+ H R++D + + +D + L R Sbjct: 37 ENERALEGLQDRVILLKRLSGDINEEVDTHNRMLDRMGNDMDSSRGFLSGTMDR 90
>SNP29_ARATH (Q9SD96) SNAP25 homologous protein SNAP29 (AtSNAP29)| (Synaptosomal-associated protein SNAP25-like 2) Length = 251 Score = 32.3 bits (72), Expect = 1.1 Identities = 17/73 (23%), Positives = 37/73 (50%) Frame = -2 Query: 533 QGIVGLQRQVMREQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRL 354 + + Q+ + +QDE L L + K++A+ + + T +D L+D+ D N R+ Sbjct: 179 EAVDAYQKTQIAKQDEALTDLSALLGELKNMAVDMGTAIERQTNELDHLQDNADELNYRV 238 Query: 353 QRVQKRLAILNKR 315 ++ +R L ++ Sbjct: 239 KQSNQRARYLLRK 251
>CCD39_MOUSE (Q9D5Y1) Coiled-coil domain-containing protein 39| Length = 937 Score = 32.3 bits (72), Expect = 1.1 Identities = 25/94 (26%), Positives = 40/94 (42%) Frame = -2 Query: 590 LGQSKKAADDMSRVAGLDNQGIVGLQRQVMREQDEGLERLEETVLSTKHIALAVNEELTL 411 L + K+ AD+ R QRQ+ RE E ++ +E T H+A E+LT Sbjct: 729 LEEQKRTADERYRCK----------QRQI-RELQEDIQSMENTFEVIGHLANNAKEKLTE 777 Query: 410 HTRLIDDLEDHVDVTNSRLQRVQKRLAILNKRAK 309 L L + +LQR+ K+ L + + Sbjct: 778 KQTLAFQLRKETEEQKPKLQRITKQCGRLRREIR 811
>PAWR_RAT (Q62627) PRKC apoptosis WT1 regulator protein (Prostate apoptosis| response-4 protein) (Par-4) (Transcriptional repressor Par-4-like protein PAWR) Length = 332 Score = 32.0 bits (71), Expect = 1.4 Identities = 21/65 (32%), Positives = 36/65 (55%) Frame = -2 Query: 527 IVGLQRQVMREQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQR 348 I L+++V+RE+ E L RL + + + + EE+ L R +DD+ED N +L++ Sbjct: 264 IEDLEKEVLRERQENL-RLTRLMQDKEEMIGKLKEEIDLLNRDLDDMEDE----NEQLKQ 318 Query: 347 VQKRL 333 K L Sbjct: 319 ENKTL 323
>RB6I2_HUMAN (Q8IUD2) RAB6-interacting protein 2 (ERC protein 1)| Length = 1116 Score = 32.0 bits (71), Expect = 1.4 Identities = 19/66 (28%), Positives = 37/66 (56%) Frame = -2 Query: 515 QRQVMREQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQRVQKR 336 Q+Q + +DE +++L E +L +K ++ EE TR + + E HV S L++ +K Sbjct: 298 QKQTLNARDESIKKLLE-MLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQKEKE 356 Query: 335 LAILNK 318 ++L + Sbjct: 357 NSMLRE 362
>CING_HUMAN (Q9P2M7) Cingulin| Length = 1197 Score = 31.6 bits (70), Expect = 1.9 Identities = 22/64 (34%), Positives = 34/64 (53%) Frame = -2 Query: 524 VGLQRQVMREQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQRV 345 VGL+RQ + E+ E RL+E + K A N+EL RL+D ED +++ + Sbjct: 384 VGLERQ-LEEKTEECSRLQELLERRKGEAQQSNKELQNMKRLLDQGEDLRHGLETQVMEL 442 Query: 344 QKRL 333 Q +L Sbjct: 443 QNKL 446
>PAWR_HUMAN (Q96IZ0) PRKC apoptosis WT1 regulator protein (Prostate apoptosis| response-4 protein) (Par-4) Length = 340 Score = 31.2 bits (69), Expect = 2.5 Identities = 21/65 (32%), Positives = 36/65 (55%) Frame = -2 Query: 527 IVGLQRQVMREQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQR 348 I L+++V+RE+ E L RL + + + + EE+ L R +DD+ED N +L++ Sbjct: 272 IEDLEKEVVRERQENL-RLVRLMQDKEEMIGKLKEEIDLLNRDLDDIEDE----NEQLKQ 326 Query: 347 VQKRL 333 K L Sbjct: 327 ENKTL 331
>MFP1_TOBAC (Q9M7J4) MAR binding filament-like protein 1-1| Length = 722 Score = 31.2 bits (69), Expect = 2.5 Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 10/99 (10%) Frame = -2 Query: 596 DLLGQSKKAADDMSR----VAGLDNQGIVGLQRQVMREQD------EGLERLEETVLSTK 447 D+ ++++AAD++ + V L+ + + L+ Q+ RE++ E LER E++ Sbjct: 535 DVYKKAERAADELKQEKNIVVTLEKE-LTFLEAQITREKESRKNLEEELERATESLDEMN 593 Query: 446 HIALAVNEELTLHTRLIDDLEDHVDVTNSRLQRVQKRLA 330 A A+ +EL L I LED +V + QK+++ Sbjct: 594 RNAFALAKELELANSHISSLEDEREVLQKSVSE-QKQIS 631
>APSB_EMENI (O60039) Anucleate primary sterigmata protein B| Length = 1051 Score = 31.2 bits (69), Expect = 2.5 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 7/73 (9%) Frame = -2 Query: 503 MREQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQRV------- 345 MR EG+ RLEE + AV +EL ++ LE + NS++QR+ Sbjct: 441 MRSASEGIIRLEEDAQNNLQRYKAVQQELEQCNEEMESLEKSLYEANSKVQRLTVQIESS 500 Query: 344 QKRLAILNKRAKG 306 Q +A L + G Sbjct: 501 QNEIAFLREEQDG 513
>PAWR_MOUSE (Q925B0) PRKC apoptosis WT1 regulator protein (Prostate apoptosis| response-4 protein) (Par-4) (Fragment) Length = 197 Score = 31.2 bits (69), Expect = 2.5 Identities = 21/65 (32%), Positives = 36/65 (55%) Frame = -2 Query: 527 IVGLQRQVMREQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQR 348 I L+++V+RE+ E L RL + + + + EE+ L R +DD+ED N +L++ Sbjct: 129 IEDLEKEVVRERQENL-RLVRLMQDKEEMIGKLKEEIDLLNRDLDDMEDE----NEQLKQ 183 Query: 347 VQKRL 333 K L Sbjct: 184 ENKTL 188
>TPM_TRISP (Q95VA8) Tropomyosin| Length = 284 Score = 30.8 bits (68), Expect = 3.2 Identities = 16/62 (25%), Positives = 30/62 (48%) Frame = -2 Query: 500 REQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQRVQKRLAILN 321 R+Q E +E+LEE + T+ + V EL + ++ ++Q + +A LN Sbjct: 30 RQQQERVEKLEEELRDTQKKMMQVENELDKAQEELTGANAQLEEKEKKVQEAEAEVAALN 89 Query: 320 KR 315 +R Sbjct: 90 RR 91
>TPM_TRIPS (Q8WR63) Tropomyosin| Length = 284 Score = 30.8 bits (68), Expect = 3.2 Identities = 16/62 (25%), Positives = 30/62 (48%) Frame = -2 Query: 500 REQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQRVQKRLAILN 321 R+Q E +E+LEE + T+ + V EL + ++ ++Q + +A LN Sbjct: 30 RQQQERVEKLEEELRDTQKKMMQVENELDKAQEELTGANAQLEEKEKKVQEAEAEVAALN 89 Query: 320 KR 315 +R Sbjct: 90 RR 91
>RB6I2_MOUSE (Q99MI1) RAB6-interacting protein 2 (ERC protein 1) (ERC1)| (CAZ-associated structural protein 2) (CAST2) Length = 1120 Score = 30.8 bits (68), Expect = 3.2 Identities = 19/66 (28%), Positives = 36/66 (54%) Frame = -2 Query: 515 QRQVMREQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQRVQKR 336 Q+Q + +DE +++L E +L +K ++ EE TR + + E HV S L++ +K Sbjct: 298 QKQTLNARDESIKKLLE-MLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQKEKE 356 Query: 335 LAILNK 318 +L + Sbjct: 357 NNMLRE 362
>RB6I2_RAT (Q811U3) RAB6-interacting protein 2 (ERC protein 1) (ERC1)| (CAZ-associated structural protein 2) (CAST2) Length = 948 Score = 30.8 bits (68), Expect = 3.2 Identities = 19/66 (28%), Positives = 36/66 (54%) Frame = -2 Query: 515 QRQVMREQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQRVQKR 336 Q+Q + +DE +++L E +L +K ++ EE TR + + E HV S L++ +K Sbjct: 298 QKQTLNARDESIKKLLE-MLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQKEKE 356 Query: 335 LAILNK 318 +L + Sbjct: 357 NNMLRE 362
>YPBR_BACSU (P54159) Hypothetical protein ypbR| Length = 1193 Score = 30.4 bits (67), Expect = 4.2 Identities = 18/78 (23%), Positives = 36/78 (46%) Frame = -2 Query: 566 DDMSRVAGLDNQGIVGLQRQVMREQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDL 387 +++SR+ + L Q +R L+ E + + A + E+L +HT L+ L Sbjct: 252 EELSRIEQQSKSNMQALTEQKVRNL---LKEHTEMLKKDETGAPSFAEQLNIHTGLVQSL 308 Query: 386 EDHVDVTNSRLQRVQKRL 333 D +D ++ +KR+ Sbjct: 309 RDQLDEAEKQMTEAEKRM 326
>ATK1_ARATH (Q07970) Kinesin-1 (Kinesin-like protein A)| Length = 793 Score = 30.0 bits (66), Expect = 5.5 Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 11/108 (10%) Frame = -2 Query: 599 KDLLGQSKKAADD--------MSRVAGLDNQGIVGLQRQVMREQDEGL---ERLEETVLS 453 +D L S+ DD +S V L N+ +QV ++D + ++L E + Sbjct: 275 QDQLSSSRVLQDDAIKQKDSLLSEVTNLRNE-----LQQVRDDRDRQVVQSQKLSEEIRK 329 Query: 452 TKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQRVQKRLAILNKRAK 309 + ++EL + T LE+ + RL ++++LAI N+R K Sbjct: 330 YQENVGKSSQELDILTAKSGSLEETCSLQKERLNMLEQQLAIANERQK 377
>NOP14_YEAST (Q99207) Nucleolar complex protein 14 (U3 small nucleolar| RNA-associated protein 2) (U3 snoRNA-associated protein 2) Length = 810 Score = 30.0 bits (66), Expect = 5.5 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 5/90 (5%) Frame = -2 Query: 539 DNQGIVGLQRQVMREQDEGLERLEETVLSTKHIALAVNEELTLHTRLID-----DLEDHV 375 DN GI + E D+G + +L K+I+++ H L+D DL+DH Sbjct: 345 DNDGIADSDDDIKFE-DQGRDEGFSQILKKKNISISCPRT---HDALLDQVKKLDLDDHP 400 Query: 374 DVTNSRLQRVQKRLAILNKRAKGGCSCMCL 285 + + ++ Q +LA NK G + + L Sbjct: 401 KIVKNIIKAYQPKLAEGNKEKLGKFTAVLL 430
>HR38_DROME (P49869) Probable nuclear hormone receptor HR38 (dHR38)| Length = 1073 Score = 30.0 bits (66), Expect = 5.5 Identities = 27/91 (29%), Positives = 35/91 (38%), Gaps = 26/91 (28%) Frame = -1 Query: 360 PSSACAKAACNSEQARQRWLLMHVPNALC--------CRHSAAR------GY-------- 247 P+SA + A QA + L+ P+ LC C+H R G+ Sbjct: 719 PNSAASSPASADLQAGR---LLQAPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKG 775 Query: 246 ----CLASHQVPVKKRPRNRCSMQRLFDALL 166 CLA PV KR RNRC R L+ Sbjct: 776 SKYVCLADKNCPVDKRRRNRCQFCRFQKCLV 806
>GRAU_DROME (Q9U405) Transcription factor grauzone| Length = 570 Score = 30.0 bits (66), Expect = 5.5 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 9/55 (16%) Frame = -1 Query: 348 CAKAACNSEQARQRWLLMHVPNALC------CRHSAARGYCLASHQ---VPVKKR 211 C K NS R WL+ HVP+ C C +R L H+ VPV +R Sbjct: 301 CGKVFANSSVLRAHWLVHHVPDEECDFQCEDCGKRFSRRNLLELHKGSHVPVNER 355
>UPP_THET2 (Q72J35) Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP| pyrophosphorylase) (UPRTase) Length = 208 Score = 29.6 bits (65), Expect = 7.2 Identities = 16/57 (28%), Positives = 28/57 (49%) Frame = -2 Query: 542 LDNQGIVGLQRQVMREQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVD 372 L +G G++ + EGLER+ + T+ + A++E L H ++ L D D Sbjct: 146 LKERGATGVKLMAILAAPEGLERIAKDHPDTEVVVAAIDERLNDHGYIVPGLGDAGD 202
>NR4A1_MOUSE (P12813) Orphan nuclear receptor NR4A1 (Orphan nuclear receptor| HMR) (Nuclear hormone receptor NUR/77) (N10 nuclear protein) Length = 601 Score = 29.3 bits (64), Expect = 9.4 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -1 Query: 261 AARGYCLASHQVPVKKRPRNRCSMQR 184 +A+ CLA+ PV KR RNRC R Sbjct: 301 SAKYICLANKDCPVDKRRRNRCQFCR 326
>NR4A1_RAT (P22829) Orphan nuclear receptor NR4A1 (Orphan nuclear receptor| HMR) (Nerve growth factor-induced protein I-B) (NGFI-B) (NUR77) Length = 597 Score = 29.3 bits (64), Expect = 9.4 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -1 Query: 261 AARGYCLASHQVPVKKRPRNRCSMQR 184 +A+ CLA+ PV KR RNRC R Sbjct: 297 SAKYICLANKDCPVDKRRRNRCQFCR 322
>KCNN4_HUMAN (O15554) Intermediate conductance calcium-activated potassium| channel protein 4 (SK4) (KCa4) (IK1) (IKCa1) (Putative Gardos channel) Length = 427 Score = 29.3 bits (64), Expect = 9.4 Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = -1 Query: 183 LFDALLKCAVSLKIYTMVCVAVLFTVLE-RLYQHVQGMRLWHL 58 L+ L+KC +S+ + ++C+ V F E +L+ G+R W + Sbjct: 56 LYLFLVKCTISISTFLLLCLIVAFHAKEVQLFMTDNGLRDWRV 98
>NR4A2_XENLA (Q04913) Orphan nuclear receptor NR4A2 (Orphan nuclear receptor| NURR1) (Nerve growth factor-induced protein I-B homolog) Length = 577 Score = 29.3 bits (64), Expect = 9.4 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -1 Query: 258 ARGYCLASHQVPVKKRPRNRCSMQRLFDALL 166 A+ CLA+ PV KR RNRC R L+ Sbjct: 278 AKYICLANKDCPVDKRRRNRCQFCRFQKCLV 308
>HOOK1_HUMAN (Q9UJC3) Hook homolog 1 (h-hook1) (hHK1)| Length = 728 Score = 29.3 bits (64), Expect = 9.4 Identities = 18/68 (26%), Positives = 34/68 (50%) Frame = -2 Query: 518 LQRQVMREQDEGLERLEETVLSTKHIALAVNEELTLHTRLIDDLEDHVDVTNSRLQRVQK 339 LQ Q + + E +L++ + + V+EEL LI+DL+ + N +Q++ + Sbjct: 531 LQEQGSKSEGESSSKLKQKLEAHMEKLTEVHEELQKKQELIEDLQPDI---NQNVQKINE 587 Query: 338 RLAILNKR 315 A L K+ Sbjct: 588 LEAALQKK 595 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,734,568 Number of Sequences: 219361 Number of extensions: 1768173 Number of successful extensions: 4905 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 4745 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4903 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5424720305 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
