ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd25m10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
2dbj|AK069200.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
3dbj|AK062564.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 54 5e-04
5emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa... 54 5e-04
6dbj|AK067367.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
7gb|CP000282.1| Saccharophagus degradans 2-40, complete genome 44 0.52
8gb|AC161217.7| Mus musculus chromosome 8, clone RP23-80D9, compl... 42 2.1
9gb|AC124170.3| Mus musculus BAC clone RP23-155H5 from 8, complet... 42 2.1
10gb|AY702650.1| Tomato yellow leaf curl Sardinia virus strain Mur... 40 8.1
11gb|AC135079.9| Mus musculus chromosome 15, clone RP24-439P7, com... 40 8.1
12gb|AC186553.1| Pan troglodytes chromosome 6 clone CH251-664D19, ... 40 8.1
13gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 8.1
14gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.1
15gb|AC183547.2| Pan troglodytes BAC clone CH251-213F19 from chrom... 40 8.1
16ref|XM_389542.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 8.1
17gb|AC122835.3| Mus musculus BAC clone RP23-187I18 from 3, comple... 40 8.1
18emb|AL450324.10| Human DNA sequence from clone RP11-307F22 on ch... 40 8.1
19emb|BX548069.7| Zebrafish DNA sequence from clone CH211-238G23 i... 40 8.1
20gb|AC183106.3| Pan troglodytes BAC clone CH251-522A15 from chrom... 40 8.1
21gb|AC182636.3| Pan troglodytes BAC clone CH251-519F5 from chromo... 40 8.1
22gb|AC093158.2| Homo sapiens chromosome 1 clone RP11-439H8, compl... 40 8.1
23dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
24gb|AY211267.1| Chlamydomonas reinhardtii zeaxanthin epoxidase pr... 40 8.1
25dbj|AB158770.1| Amphidinium carterae plastid psbC mRNA for photo... 40 8.1
26gb|AY193715.1| Tomato yellow leaf curl virus strain Almeria inte... 40 8.1
27gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 geno... 40 8.1
28gb|AC104038.9| Homo sapiens chromosome 11, clone RP11-746C23, co... 40 8.1
29dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome 40 8.1
30emb|Z97200.1|HS79C4 Human DNA sequence from clone RP1-79C4 on ch... 40 8.1
31dbj|AK065699.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
32emb|BX119975.7| Zebrafish DNA sequence from clone CH211-200A16 i... 40 8.1
33emb|AL163051.5|CNS01RIA Human chromosome 14 DNA sequence BAC R-8... 40 8.1
34emb|AL137786.3|CNS01DWO Human chromosome 14 DNA sequence BAC R-4... 40 8.1
35emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 40 8.1
36emb|AL669938.9| Mouse DNA sequence from clone RP23-264N2 on chro... 40 8.1 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                            
Query: 33       ttcctaattaggtagagttgcttgaagagcctttcgcagacaggacgtgactgatcaaat 92
                |||||| ||||||||||||||| ||| ||||||| |||||||| |  || || || ||||
Sbjct: 21697551 ttcctagttaggtagagttgctcgaaaagccttttgcagacagaatatggctcatgaaat 21697492

                       
Query: 93       tactaca 99
                |||||||
Sbjct: 21697491 tactaca 21697485



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 98/121 (80%), Gaps = 4/121 (3%)
 Strand = Plus / Minus

                                                                            
Query: 119      taagatctggtcgacaaaaattactgctgacctgtggttatgcttgcttctgcagctcca 178
                ||||||||||| ||| ||| |||||||||||||||||   ||||||||||   |||||| 
Sbjct: 21697473 taagatctggttgacgaaa-ttactgctgacctgtggccgtgcttgcttc---agctcct 21697418

                                                                            
Query: 179      gtagcagaaacctctgtggttttctcatccggggctgctacttcctcagttaccacagca 238
                | | ||| ||| ||||  |||||||||   | |||||||||||| |||| |||| |||||
Sbjct: 21697417 gcaacagcaacatctgcagttttctcacttgaggctgctacttcttcaggtaccgcagca 21697358

                 
Query: 239      g 239
                |
Sbjct: 21697357 g 21697357



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 237      cagactcactacttgcagttgcaggaacctc 267
                |||||||||||||||||||| | ||||||||
Sbjct: 21697344 cagactcactacttgcagttactggaacctc 21697314



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                    
Query: 544      ctcaacgagcttgtcgtcaactgtgctttcaaccccagaagttgaaactgaa 595
                ||||||||| ||||| ||||||||||| ||| |  ||||||||  |||||||
Sbjct: 21696983 ctcaacgagtttgtcatcaactgtgctatcatcttcagaagtttcaactgaa 21696932
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>dbj|AK069200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009A08, full
            insert sequence
          Length = 2554

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                        
Query: 33   ttcctaattaggtagagttgcttgaagagcctttcgcagacaggacgtgactgatcaaat 92
            |||||| ||||||||||||||| ||| ||||||| |||||||| |  || || || ||||
Sbjct: 2418 ttcctagttaggtagagttgctcgaaaagccttttgcagacagaatatggctcatgaaat 2359

                   
Query: 93   tactaca 99
            |||||||
Sbjct: 2358 tactaca 2352



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 98/121 (80%), Gaps = 4/121 (3%)
 Strand = Plus / Minus

                                                                        
Query: 119  taagatctggtcgacaaaaattactgctgacctgtggttatgcttgcttctgcagctcca 178
            ||||||||||| ||| ||| |||||||||||||||||   ||||||||||   |||||| 
Sbjct: 2340 taagatctggttgacgaaa-ttactgctgacctgtggccgtgcttgcttc---agctcct 2285

                                                                        
Query: 179  gtagcagaaacctctgtggttttctcatccggggctgctacttcctcagttaccacagca 238
            | | ||| ||| ||||  |||||||||   | |||||||||||| |||| |||| |||||
Sbjct: 2284 gcaacagcaacatctgcagttttctcacttgaggctgctacttcttcaggtaccgcagca 2225

             
Query: 239  g 239
            |
Sbjct: 2224 g 2224



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 237  cagactcactacttgcagttgcaggaacctc 267
            |||||||||||||||||||| | ||||||||
Sbjct: 2211 cagactcactacttgcagttactggaacctc 2181



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 544  ctcaacgagcttgtcgtcaactgtgctttcaaccccagaagttgaaactgaa 595
            ||||||||| ||||| ||||||||||| ||| |  ||||||||  |||||||
Sbjct: 1850 ctcaacgagtttgtcatcaactgtgctatcatcttcagaagtttcaactgaa 1799
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>dbj|AK062564.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-F04, full
            insert sequence
          Length = 1800

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                        
Query: 33   ttcctaattaggtagagttgcttgaagagcctttcgcagacaggacgtgactgatcaaat 92
            |||||| ||||||||||||||| ||| ||||||| |||||||| |  || || || ||||
Sbjct: 1646 ttcctagttaggtagagttgctcgaaaagccttttgcagacagaatatggctcatgaaat 1587

                   
Query: 93   tactaca 99
            |||||||
Sbjct: 1586 tactaca 1580



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 98/121 (80%), Gaps = 4/121 (3%)
 Strand = Plus / Minus

                                                                        
Query: 119  taagatctggtcgacaaaaattactgctgacctgtggttatgcttgcttctgcagctcca 178
            ||||||||||| ||| ||| |||||||||||||||||   ||||||||||   |||||| 
Sbjct: 1568 taagatctggttgacgaaa-ttactgctgacctgtggccgtgcttgcttc---agctcct 1513

                                                                        
Query: 179  gtagcagaaacctctgtggttttctcatccggggctgctacttcctcagttaccacagca 238
            | | ||| ||| ||||  |||||||||   | |||||||||||| |||| |||| |||||
Sbjct: 1512 gcaacagcaacatctgcagttttctcacttgaggctgctacttcttcaggtaccgcagca 1453

             
Query: 239  g 239
            |
Sbjct: 1452 g 1452



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 237  cagactcactacttgcagttgcaggaacctc 267
            |||||||||||||||||||| | ||||||||
Sbjct: 1439 cagactcactacttgcagttactggaacctc 1409



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 544  ctcaacgagcttgtcgtcaactgtgctttcaaccccagaagttgaaactgaa 595
            ||||||||| ||||| ||||||||||| ||| |  ||||||||  |||||||
Sbjct: 1078 ctcaacgagtttgtcatcaactgtgctatcatcttcagaagtttcaactgaa 1027
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                            
Query: 33       ttcctaattaggtagagttgcttgaagagcctttcgcagacaggacgtgactgatcaaat 92
                |||||| ||||||||||||||| ||| ||||||| |||||||| |  || || || ||||
Sbjct: 21625896 ttcctagttaggtagagttgctcgaaaagccttttgcagacagaatatggctcatgaaat 21625837

                       
Query: 93       tactaca 99
                |||||||
Sbjct: 21625836 tactaca 21625830



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 98/121 (80%), Gaps = 4/121 (3%)
 Strand = Plus / Minus

                                                                            
Query: 119      taagatctggtcgacaaaaattactgctgacctgtggttatgcttgcttctgcagctcca 178
                ||||||||||| ||| ||| |||||||||||||||||   ||||||||||   |||||| 
Sbjct: 21625818 taagatctggttgacgaaa-ttactgctgacctgtggccgtgcttgcttc---agctcct 21625763

                                                                            
Query: 179      gtagcagaaacctctgtggttttctcatccggggctgctacttcctcagttaccacagca 238
                | | ||| ||| ||||  |||||||||   | |||||||||||| |||| |||| |||||
Sbjct: 21625762 gcaacagcaacatctgcagttttctcacttgaggctgctacttcttcaggtaccgcagca 21625703

                 
Query: 239      g 239
                |
Sbjct: 21625702 g 21625702



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 237      cagactcactacttgcagttgcaggaacctc 267
                |||||||||||||||||||| | ||||||||
Sbjct: 21625689 cagactcactacttgcagttactggaacctc 21625659



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                    
Query: 544      ctcaacgagcttgtcgtcaactgtgctttcaaccccagaagttgaaactgaa 595
                ||||||||| ||||| ||||||||||| ||| |  ||||||||  |||||||
Sbjct: 21625328 ctcaacgagtttgtcatcaactgtgctatcatcttcagaagtttcaactgaa 21625277
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>emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa0024C08 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 186030

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                         
Query: 33     ttcctaattaggtagagttgcttgaagagcctttcgcagacag 75
              |||||| ||||||||||||||| ||| ||||||| ||||||||
Sbjct: 115000 ttcctagttaggtagagttgctcgaaaagccttttgcagacag 115042



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 237    cagactcactacttgcagttgcaggaacctc 267
              |||||||||||||||||||| | ||||||||
Sbjct: 115207 cagactcactacttgcagttactggaacctc 115237



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 98/121 (80%), Gaps = 4/121 (3%)
 Strand = Plus / Plus

                                                                          
Query: 119    taagatctggtcgacaaaaattactgctgacctgtggttatgcttgcttctgcagctcca 178
              ||||||||||| ||| ||| |||||||||||||||||   ||||||||||   |||||| 
Sbjct: 115078 taagatctggttgacgaaa-ttactgctgacctgtggccgtgcttgcttc---agctcct 115133

                                                                          
Query: 179    gtagcagaaacctctgtggttttctcatccggggctgctacttcctcagttaccacagca 238
              | | ||| ||| ||||  |||||||||   | |||||||||||| |||| |||| |||||
Sbjct: 115134 gcaacagcaacatctgcagttttctcacttgaggctgctacttcttcaggtaccgcagca 115193

               
Query: 239    g 239
              |
Sbjct: 115194 g 115194



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                  
Query: 544    ctcaacgagcttgtcgtcaactgtgctttcaaccccagaagttgaaactgaa 595
              ||||||||| ||||| ||||||||||| ||| |  ||||||||  |||||||
Sbjct: 115568 ctcaacgagtttgtcatcaactgtgctatcatcttcagaagtttcaactgaa 115619
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>dbj|AK067367.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106B18, full
            insert sequence
          Length = 3861

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 237  cagactcactacttgcagttgcaggaacctc 267
            |||||||||||||||||||| | ||||||||
Sbjct: 2204 cagactcactacttgcagttactggaacctc 2174



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 544  ctcaacgagcttgtcgtcaactgtgctttcaaccccagaagttgaaactgaa 595
            ||||||||| ||||| ||||||||||| ||| |  ||||||||  |||||||
Sbjct: 1843 ctcaacgagtttgtcatcaactgtgctatcatcttcagaagtttcaactgaa 1792
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>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 367     ttcaacttcaatagcagaaactgtag 392
               ||||||||||||| ||||||||||||
Sbjct: 1921955 ttcaacttcaataccagaaactgtag 1921980
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>gb|AC161217.7| Mus musculus chromosome 8, clone RP23-80D9, complete sequence
          Length = 234127

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 282   ctggctcctcagccttatcaa 302
             |||||||||||||||||||||
Sbjct: 77408 ctggctcctcagccttatcaa 77428
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>gb|AC124170.3| Mus musculus BAC clone RP23-155H5 from 8, complete sequence
          Length = 235023

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 282   ctggctcctcagccttatcaa 302
             |||||||||||||||||||||
Sbjct: 90448 ctggctcctcagccttatcaa 90428
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>gb|AY702650.1| Tomato yellow leaf curl Sardinia virus strain Murcia from Morocco,
           complete genome
          Length = 2777

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 126 tggtcgacaaaaattactgc 145
           ||||||||||||||||||||
Sbjct: 60  tggtcgacaaaaattactgc 41
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>gb|AC135079.9| Mus musculus chromosome 15, clone RP24-439P7, complete sequence
          Length = 155778

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   gcttgcttctgcagctccag 179
             ||||||||||||||||||||
Sbjct: 96847 gcttgcttctgcagctccag 96828
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>gb|AC186553.1| Pan troglodytes chromosome 6 clone CH251-664D19, complete sequence
          Length = 214787

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 10     acatgcaatctatcctaatactct 33
              |||||||| |||||||||||||||
Sbjct: 214086 acatgcaacctatcctaatactct 214109
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 481     aacggcaccagtgacagctt 500
               ||||||||||||||||||||
Sbjct: 3841867 aacggcaccagtgacagctt 3841848
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 100      tatcagggccttttgcagat 119
                ||||||||||||||||||||
Sbjct: 28745820 tatcagggccttttgcagat 28745839
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>gb|AC183547.2| Pan troglodytes BAC clone CH251-213F19 from chromosome 6, complete
             sequence
          Length = 190731

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 10    acatgcaatctatcctaatactct 33
             |||||||| |||||||||||||||
Sbjct: 81874 acatgcaacctatcctaatactct 81851
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>ref|XM_389542.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09366.1)
            partial mRNA
          Length = 1386

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 264  cctccggcactgattcttctggctcctc 291
            |||||||| ||| |||||||||||||||
Sbjct: 1199 cctccggctctggttcttctggctcctc 1226
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>gb|AC122835.3| Mus musculus BAC clone RP23-187I18 from 3, complete sequence
          Length = 218449

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 579   cagaagttgaaactgaagtc 598
             ||||||||||||||||||||
Sbjct: 51621 cagaagttgaaactgaagtc 51640
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>emb|AL450324.10| Human DNA sequence from clone RP11-307F22 on chromosome 6, complete
              sequence
          Length = 101846

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 10     acatgcaatctatcctaatactct 33
              |||||||| |||||||||||||||
Sbjct: 100127 acatgcaacctatcctaatactct 100104
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>emb|BX548069.7| Zebrafish DNA sequence from clone CH211-238G23 in linkage group 18,
             complete sequence
          Length = 142514

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 485   gcaccagtgacagcttctgt 504
             ||||||||||||||||||||
Sbjct: 96919 gcaccagtgacagcttctgt 96938
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>gb|AC183106.3| Pan troglodytes BAC clone CH251-522A15 from chromosome 6, complete
             sequence
          Length = 173865

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 10    acatgcaatctatcctaatactct 33
             |||||||| |||||||||||||||
Sbjct: 42186 acatgcaacctatcctaatactct 42163
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>gb|AC182636.3| Pan troglodytes BAC clone CH251-519F5 from chromosome 6, complete
              sequence
          Length = 197430

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 10     acatgcaatctatcctaatactct 33
              |||||||| |||||||||||||||
Sbjct: 114469 acatgcaacctatcctaatactct 114446
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>gb|AC093158.2| Homo sapiens chromosome 1 clone RP11-439H8, complete sequence
          Length = 179582

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 514    atcctctttgctttcaactt 533
              ||||||||||||||||||||
Sbjct: 107994 atcctctttgctttcaactt 107975
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 100      tatcagggccttttgcagat 119
                ||||||||||||||||||||
Sbjct: 28837144 tatcagggccttttgcagat 28837163
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>gb|AY211267.1| Chlamydomonas reinhardtii zeaxanthin epoxidase precursor (ZEP1) gene,
            complete cds; nuclear gene for chloroplast product
          Length = 6369

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 494  acagcttctgttgaagagct 513
            ||||||||||||||||||||
Sbjct: 1003 acagcttctgttgaagagct 1022
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>dbj|AB158770.1| Amphidinium carterae plastid psbC mRNA for photosystem II CP43
           protein, partial cds
          Length = 1066

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 358 ctctttgctttcaacttcaa 377
           ||||||||||||||||||||
Sbjct: 326 ctctttgctttcaacttcaa 345
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>gb|AY193715.1| Tomato yellow leaf curl virus strain Almeria intergenic region
          Length = 317

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 126 tggtcgacaaaaattactgc 145
           ||||||||||||||||||||
Sbjct: 240 tggtcgacaaaaattactgc 221
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>gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 genomic sequence, complete
             sequence
          Length = 147344

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 100   tatcagggccttttgcagat 119
             ||||||||||||||||||||
Sbjct: 52801 tatcagggccttttgcagat 52820
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>gb|AC104038.9| Homo sapiens chromosome 11, clone RP11-746C23, complete sequence
          Length = 187648

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   atcaagaggagtgatttcct 317
             ||||||||||||||||||||
Sbjct: 58785 atcaagaggagtgatttcct 58804
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>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
          Length = 3573470

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 482     acggcaccagtgacagcttc 501
               ||||||||||||||||||||
Sbjct: 1588446 acggcaccagtgacagcttc 1588465
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>emb|Z97200.1|HS79C4 Human DNA sequence from clone RP1-79C4 on chromosome 1q24, complete
             sequence
          Length = 158549

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   cagctccagtagcagaaacc 190
             ||||||||||||||||||||
Sbjct: 65416 cagctccagtagcagaaacc 65435
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>dbj|AK065699.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037H04, full
            insert sequence
          Length = 2068

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 544  ctcaacgagcttgtcgtcaactgtgctttcaaccccagaagttgaaactgaa 595
            ||||||||| ||||| ||||||||||| ||| |  ||||||||  |||||||
Sbjct: 1850 ctcaacgagtttgtcatcaactgtgctatcatcttcagaagtttcaactgaa 1799
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>emb|BX119975.7| Zebrafish DNA sequence from clone CH211-200A16 in linkage group 8,
             complete sequence
          Length = 154904

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 494   acagcttctgttgaagagct 513
             ||||||||||||||||||||
Sbjct: 44508 acagcttctgttgaagagct 44489
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>emb|AL163051.5|CNS01RIA Human chromosome 14 DNA sequence BAC R-872J21 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 188020

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 274    tgattcttctggctcctcagcctt 297
              |||||||||| |||||||||||||
Sbjct: 186091 tgattcttctagctcctcagcctt 186114
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>emb|AL137786.3|CNS01DWO Human chromosome 14 DNA sequence BAC R-433J8 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 197689

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 274    tgattcttctggctcctcagcctt 297
              |||||||||| |||||||||||||
Sbjct: 172466 tgattcttctagctcctcagcctt 172443
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 434     tcctcctctttgctttcaacttca 457
               |||||||||||||| |||||||||
Sbjct: 1800872 tcctcctctttgctctcaacttca 1800895
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>emb|AL669938.9| Mouse DNA sequence from clone RP23-264N2 on chromosome 4, complete
             sequence
          Length = 199071

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   tcttctggctcctcagcctt 297
             ||||||||||||||||||||
Sbjct: 59208 tcttctggctcctcagcctt 59189


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,479,350
Number of Sequences: 3902068
Number of extensions: 5479350
Number of successful extensions: 106301
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105994
Number of HSP's gapped (non-prelim): 307
length of query: 598
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 575
effective length of database: 17,143,297,704
effective search space: 9857396179800
effective search space used: 9857396179800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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