Clone Name | rbasd26b04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | IPO9_HUMAN (Q96P70) Importin-9 (Imp9) (Ran-binding protein 9) (R... | 29 | 3.9 | 2 | IPO9_MOUSE (Q91YE6) Importin-9 (Importin 9a) (Imp9a) (Importin 9... | 28 | 6.7 | 3 | RL4_MYCPU (Q98PY2) 50S ribosomal protein L4 | 28 | 8.7 |
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>IPO9_HUMAN (Q96P70) Importin-9 (Imp9) (Ran-binding protein 9) (RanbP9)| Length = 1040 Score = 28.9 bits (63), Expect = 3.9 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -3 Query: 184 VNQPINELCILC*VNPPFTRSFNLKFC 104 +N + LCI+C V+P FT S K C Sbjct: 579 LNLVMETLCIVCTVDPEFTASMESKIC 605
>IPO9_MOUSE (Q91YE6) Importin-9 (Importin 9a) (Imp9a) (Importin 9b) (Imp9b)| (Ran-binding protein 9) (RanBP9) Length = 1040 Score = 28.1 bits (61), Expect = 6.7 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -3 Query: 184 VNQPINELCILC*VNPPFTRSFNLKFC 104 +N + LCI+C V+P FT S K C Sbjct: 579 LNLVMETLCIVCTVDPEFTASVENKIC 605
>RL4_MYCPU (Q98PY2) 50S ribosomal protein L4| Length = 292 Score = 27.7 bits (60), Expect = 8.7 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +2 Query: 50 DCMLYGSGRRXTAQHKIGAKLEVKGTGK 133 DC+L R HK+ + EV GTGK Sbjct: 120 DCILSERASRRQGTHKVKNRAEVSGTGK 147 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,249,275 Number of Sequences: 219361 Number of extensions: 358433 Number of successful extensions: 663 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 658 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 663 length of database: 80,573,946 effective HSP length: 39 effective length of database: 72,018,867 effective search space used: 1728452808 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)