>RF1_ORYSA (Q76C99) Rf1 protein, mitochondrial precursor (PPR protein)|
           (Fertility restorer) (Restorer for CMS)
          Length = 791

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = -2

Query: 135 MYEEXLXKGWKPNVFTYNALIRGYXVSGSPENAFXAYGRMIXLG 4
           ++E  +  G KPNV TYN LI GY ++G  + A      M+ +G
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541



 Score = 29.3 bits (64), Expect = 2.9
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -2

Query: 111 GWKPNVFTYNALIRGYXVSGSPENAFXAYGRM 16
           G  P+  TYN+++ GY  SG P+ A     +M
Sbjct: 261 GVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM 292



 Score = 28.1 bits (61), Expect = 6.5
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -2

Query: 111 GWKPNVFTYNALIRGYXVSGSPENAFXAYGRMIXLG 4
           G KPN  TY+ LI GY      E+A   +  M   G
Sbjct: 541 GLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576



 Score = 28.1 bits (61), Expect = 6.5
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -2

Query: 135 MYEEXLXKGWKPNVFTYNALIRGYXVSGS 49
           +++    +G KP + TY  L++GY   G+
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGA 351

>ISPE_AQUAE (O67060) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC|
           2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase)
          Length = 268

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = +2

Query: 35  NAFSGLPETLYPRIRALY--VKTLGFQPFXSXSSYILPXXGG 154
           N    +   LYP I  +Y  V+ LGF+PF S S   +   GG
Sbjct: 206 NVLGDIARELYPEINEVYRFVEYLGFKPFVSGSGSTVYFFGG 247

>ZFNL2_ARATH (Q9SQU4) Zinc finger CCCH type domain-containing protein ZFN-like 2|
          Length = 437

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 28  GXKCVFRAARDXVPPDKGVVCENIGLP 108
           G  C +    D VPP  G+V  +IGLP
Sbjct: 300 GSSCRYHHPVDAVPPKTGIVLSSIGLP 326

>CBX2_HUMAN (Q14781) Chromobox protein homolog 2|
          Length = 532

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 16/45 (35%), Positives = 18/45 (40%)
 Frame = -3

Query: 152 PPXQAKCMKXCWXKAGSPMFSHTTPLSGGTXSLAALKTHLXPTVG 18
           P   AK +K      G+P      PLS     LAALK H     G
Sbjct: 179 PVSLAKVLKTARKDLGAPASKLPPPLSAPVAGLAALKAHAKEACG 223

>ZFNL1_ARATH (Q84W91) Zinc finger CCCH type domain-containing protein ZFN-like 1|
          Length = 468

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = +1

Query: 28  GXKCVFRAARDXVPPDKGVVCENIGLP 108
           G  C F   RD VPP    V   IGLP
Sbjct: 307 GTSCKFHHPRDRVPPRANCVLSPIGLP 333


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,260,628
Number of Sequences: 219361
Number of extensions: 360238
Number of successful extensions: 739
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 80,573,946
effective HSP length: 44
effective length of database: 70,922,062
effective search space used: 1702129488
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)