ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26a20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ATCY_SCHPO (O14022) Probable cation-transporting ATPase C29A4.19... 28 7.1

>ATCY_SCHPO (O14022) Probable cation-transporting ATPase C29A4.19c (EC 3.6.3.-)|
          Length = 1096

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 91  PHNFHTAAKFLGKSSTPSNPYYLSL 17
           PH  H   KFL   STPS P  +S+
Sbjct: 338 PHLIHAGTKFLKIDSTPSTPCLISV 362


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,179,494
Number of Sequences: 219361
Number of extensions: 217496
Number of successful extensions: 943
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 80,573,946
effective HSP length: 18
effective length of database: 76,625,448
effective search space used: 1839010752
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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