Clone Name | rbasd25l20 |
---|---|
Clone Library Name | barley_pub |
>Y1132_METJA (Q58532) Hypothetical UPF0058 protein MJ1132| Length = 118 Score = 30.4 bits (67), Expect = 2.9 Identities = 15/46 (32%), Positives = 22/46 (47%) Frame = +1 Query: 244 HCHRLLPYQNSSSLLSAGCILMTQQNNHQDVDSGSALRLKTNKMGH 381 H HRL Q ++ LL + C+ NN +V A +L+ N H Sbjct: 48 HIHRLKSEQKAAILLLSACVASYLANNMDNVPKNLAKKLEENAFKH 93
>SUHW3_HUMAN (Q8ND82) Suppressor of hairy wing homolog 3| Length = 737 Score = 30.0 bits (66), Expect = 3.8 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 7/70 (10%) Frame = -2 Query: 414 QGKDPAAGVCLMSHLVRLQSK-------CAPRINVLVVILLGHQNTSCRKQRGTVLIRQK 256 +G P A V + + L LQSK CAP + L V QNT+ R R + R K Sbjct: 502 EGLPPGAKVTIRASLGPLQSKLPTAPFGCAPGTSFLQVTPPTSQNTTARNPRKSNASRSK 561 Query: 255 TMTVPTVVQT 226 T + T Sbjct: 562 TSKLHATTST 571
>Z585B_PONPY (Q5RB30) Zinc finger protein 585B| Length = 769 Score = 30.0 bits (66), Expect = 3.8 Identities = 17/72 (23%), Positives = 31/72 (43%) Frame = +1 Query: 169 RTVFTITLVRRQVSWMLSRCLYHCGHCHRLLPYQNSSSLLSAGCILMTQQNNHQDVDSGS 348 ++VF ++ + R LY C C + PY + S+ + T + +H+ D G Sbjct: 193 KSVFQVSSLFRHQRIHTGEKLYQCSECGKGFPYNSDLSIHEK---IHTGERHHECTDCGK 249 Query: 349 ALRLKTNKMGHQ 384 A ++ HQ Sbjct: 250 AFTQRSTLKMHQ 261
>ATP4A_CANFA (P50996) Potassium-transporting ATPase alpha chain 1 (EC 3.6.3.10)| (Proton pump) (Gastric H+/K+ ATPase alpha subunit) Length = 1033 Score = 29.3 bits (64), Expect = 6.5 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 1/79 (1%) Frame = -2 Query: 390 VCLMSHLVRLQSKCAPRINVLVVILLGHQNTSCRKQRGTVLIRQKTMTVPTVVQTPREHP 211 VCL RL SK N+ V LG ++ C + GT + Q +MTV + H Sbjct: 351 VCLSLTAKRLASKNCVVKNLEAVETLGSKSVICSDKTGT--LTQNSMTVSNLWFDNHIHT 408 Query: 210 RD-LPPHKGDREDCTAEQW 157 D G + D ++E W Sbjct: 409 ADTTEDQSGQKFDQSSETW 427
>M4K3_HUMAN (Q8IVH8) Mitogen-activated protein kinase kinase kinase kinase 3| (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 3) (MEK kinase kinase 3) (MEKKK 3) (Germinal center kinase-related protein kinase) (GLK) Length = 894 Score = 29.3 bits (64), Expect = 6.5 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 10/41 (24%) Frame = -1 Query: 328 GGYFVGSSKYILQKAERNCF----------DKAEDDDSAHS 236 GGYF+G++K +L+ E D+ +DD+S HS Sbjct: 385 GGYFLGANKSLLKSVEEELHQRGHVAHLEDDEGDDDESKHS 425
>Z585B_HUMAN (Q52M93) Zinc finger protein 585B (zinc finger protein 41-like| protein) Length = 769 Score = 28.9 bits (63), Expect = 8.5 Identities = 15/52 (28%), Positives = 23/52 (44%) Frame = +1 Query: 229 LYHCGHCHRLLPYQNSSSLLSAGCILMTQQNNHQDVDSGSALRLKTNKMGHQ 384 LY C C + PY + S+ + T + +H+ D G A K+ HQ Sbjct: 213 LYECSECGKGFPYNSDLSIHEK---IHTGERHHECTDCGKAFTQKSTLKIHQ 261 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,537,833 Number of Sequences: 219361 Number of extensions: 1417976 Number of successful extensions: 3920 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3782 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3919 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3754426130 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)