ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd25l17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190643.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 597 Score = 196 bits (99), Expect = 4e-47 Identities = 177/203 (87%) Strand = Plus / Minus Query: 136 atatcttgctcataggtgacctgagcaaccaggccattgaaaattagacccagagcagca 195 ||||| ||||| ||| ||||||||||||||| ||| |||| |||||||||||||| ||| Sbjct: 554 atatcctgctcgtagatgacctgagcaaccaaaccaatgaatattagacccagagctgca 495 Query: 196 accttcctccattccacctctggtgttgcaaagacggcatttgcgattgtaagaccgagt 255 ||||||||||| |||||||| |||||||| |||||||||||||| |||||||| |||||| Sbjct: 494 accttcctccactccacctcaggtgttgcgaagacggcatttgcaattgtaagcccgagt 435 Query: 256 atcgccatgagtgcaaggtaaatattcatccgagtttttgaccccgcactctcctctgca 315 || |||||||| |||||||||| ||||||| ||||||||| || ||||| || | |||| Sbjct: 434 attgccatgagcccaaggtaaatgttcatcctagtttttgatcctgcactttcttttgca 375 Query: 316 atctctctgaccttctgtgcttc 338 || ||| ||||||| |||||||| Sbjct: 374 atatctttgaccttttgtgcttc 352 Score = 56.0 bits (28), Expect = 1e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 385 accttgccaaggcttttgaagaacatgccttcgnttttctcct 427 ||||| |||||||||||||||||||| ||||| ||||||||| Sbjct: 302 accttcccaaggcttttgaagaacataccttcatttttctcct 260
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 196 bits (99), Expect = 4e-47 Identities = 177/203 (87%) Strand = Plus / Plus Query: 136 atatcttgctcataggtgacctgagcaaccaggccattgaaaattagacccagagcagca 195 ||||| ||||| ||| ||||||||||||||| ||| |||| |||||||||||||| ||| Sbjct: 36729541 atatcctgctcgtagatgacctgagcaaccaaaccaatgaatattagacccagagctgca 36729600 Query: 196 accttcctccattccacctctggtgttgcaaagacggcatttgcgattgtaagaccgagt 255 ||||||||||| |||||||| |||||||| |||||||||||||| |||||||| |||||| Sbjct: 36729601 accttcctccactccacctcaggtgttgcgaagacggcatttgcaattgtaagcccgagt 36729660 Query: 256 atcgccatgagtgcaaggtaaatattcatccgagtttttgaccccgcactctcctctgca 315 || |||||||| |||||||||| ||||||| ||||||||| || ||||| || | |||| Sbjct: 36729661 attgccatgagcccaaggtaaatgttcatcctagtttttgatcctgcactttcttttgca 36729720 Query: 316 atctctctgaccttctgtgcttc 338 || ||| ||||||| |||||||| Sbjct: 36729721 atatctttgaccttttgtgcttc 36729743 Score = 56.0 bits (28), Expect = 1e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 385 accttgccaaggcttttgaagaacatgccttcgnttttctcct 427 ||||| |||||||||||||||||||| ||||| ||||||||| Sbjct: 36729793 accttcccaaggcttttgaagaacataccttcatttttctcct 36729835
>dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0529E05 Length = 134982 Score = 196 bits (99), Expect = 4e-47 Identities = 177/203 (87%) Strand = Plus / Plus Query: 136 atatcttgctcataggtgacctgagcaaccaggccattgaaaattagacccagagcagca 195 ||||| ||||| ||| ||||||||||||||| ||| |||| |||||||||||||| ||| Sbjct: 55856 atatcctgctcgtagatgacctgagcaaccaaaccaatgaatattagacccagagctgca 55915 Query: 196 accttcctccattccacctctggtgttgcaaagacggcatttgcgattgtaagaccgagt 255 ||||||||||| |||||||| |||||||| |||||||||||||| |||||||| |||||| Sbjct: 55916 accttcctccactccacctcaggtgttgcgaagacggcatttgcaattgtaagcccgagt 55975 Query: 256 atcgccatgagtgcaaggtaaatattcatccgagtttttgaccccgcactctcctctgca 315 || |||||||| |||||||||| ||||||| ||||||||| || ||||| || | |||| Sbjct: 55976 attgccatgagcccaaggtaaatgttcatcctagtttttgatcctgcactttcttttgca 56035 Query: 316 atctctctgaccttctgtgcttc 338 || ||| ||||||| |||||||| Sbjct: 56036 atatctttgaccttttgtgcttc 56058 Score = 56.0 bits (28), Expect = 1e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 385 accttgccaaggcttttgaagaacatgccttcgnttttctcct 427 ||||| |||||||||||||||||||| ||||| ||||||||| Sbjct: 56108 accttcccaaggcttttgaagaacataccttcatttttctcct 56150
>dbj|AK101805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066K09, full insert sequence Length = 3051 Score = 196 bits (99), Expect = 4e-47 Identities = 177/203 (87%) Strand = Plus / Plus Query: 136 atatcttgctcataggtgacctgagcaaccaggccattgaaaattagacccagagcagca 195 ||||| ||||| ||| ||||||||||||||| ||| |||| |||||||||||||| ||| Sbjct: 2050 atatcctgctcgtagatgacctgagcaaccaaaccaatgaatattagacccagagctgca 2109 Query: 196 accttcctccattccacctctggtgttgcaaagacggcatttgcgattgtaagaccgagt 255 ||||||||||| |||||||| |||||||| |||||||||||||| |||||||| |||||| Sbjct: 2110 accttcctccactccacctcaggtgttgcgaagacggcatttgcaattgtaagcccgagt 2169 Query: 256 atcgccatgagtgcaaggtaaatattcatccgagtttttgaccccgcactctcctctgca 315 || |||||||| |||||||||| ||||||| ||||||||| || ||||| || | |||| Sbjct: 2170 attgccatgagcccaaggtaaatgttcatcctagtttttgatcctgcactttcttttgca 2229 Query: 316 atctctctgaccttctgtgcttc 338 || ||| ||||||| |||||||| Sbjct: 2230 atatctttgaccttttgtgcttc 2252 Score = 56.0 bits (28), Expect = 1e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 385 accttgccaaggcttttgaagaacatgccttcgnttttctcct 427 ||||| |||||||||||||||||||| ||||| ||||||||| Sbjct: 2302 accttcccaaggcttttgaagaacataccttcatttttctcct 2344
>dbj|AK099561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034J20, full insert sequence Length = 1002 Score = 196 bits (99), Expect = 4e-47 Identities = 177/203 (87%) Strand = Plus / Minus Query: 136 atatcttgctcataggtgacctgagcaaccaggccattgaaaattagacccagagcagca 195 ||||| ||||| ||| ||||||||||||||| ||| |||| |||||||||||||| ||| Sbjct: 847 atatcctgctcgtagatgacctgagcaaccaaaccaatgaatattagacccagagctgca 788 Query: 196 accttcctccattccacctctggtgttgcaaagacggcatttgcgattgtaagaccgagt 255 ||||||||||| |||||||| |||||||| |||||||||||||| |||||||| |||||| Sbjct: 787 accttcctccactccacctcaggtgttgcgaagacggcatttgcaattgtaagcccgagt 728 Query: 256 atcgccatgagtgcaaggtaaatattcatccgagtttttgaccccgcactctcctctgca 315 || |||||||| |||||||||| ||||||| ||||||||| || ||||| || | |||| Sbjct: 727 attgccatgagcccaaggtaaatgttcatcctagtttttgatcctgcactttcttttgca 668 Query: 316 atctctctgaccttctgtgcttc 338 || ||| ||||||| |||||||| Sbjct: 667 atatctttgaccttttgtgcttc 645 Score = 56.0 bits (28), Expect = 1e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 385 accttgccaaggcttttgaagaacatgccttcgnttttctcct 427 ||||| |||||||||||||||||||| ||||| ||||||||| Sbjct: 595 accttcccaaggcttttgaagaacataccttcatttttctcct 553
>dbj|AK105423.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-C01, full insert sequence Length = 3098 Score = 149 bits (75), Expect = 9e-33 Identities = 117/131 (89%) Strand = Plus / Plus Query: 136 atatcttgctcataggtgacctgagcaaccaggccattgaaaattagacccagagcagca 195 ||||| ||||| ||| ||||||||||||||| ||| |||| |||||||||||||| ||| Sbjct: 2181 atatcctgctcgtagatgacctgagcaaccaaaccaatgaatattagacccagagctgca 2240 Query: 196 accttcctccattccacctctggtgttgcaaagacggcatttgcgattgtaagaccgagt 255 ||||||||||| |||||||| |||||||| |||||||||||||| |||||||| |||||| Sbjct: 2241 accttcctccactccacctcaggtgttgcgaagacggcatttgcaattgtaagcccgagt 2300 Query: 256 atcgccatgag 266 || |||||||| Sbjct: 2301 attgccatgag 2311 Score = 56.0 bits (28), Expect = 1e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 385 accttgccaaggcttttgaagaacatgccttcgnttttctcct 427 ||||| |||||||||||||||||||| ||||| ||||||||| Sbjct: 2323 accttcccaaggcttttgaagaacataccttcatttttctcct 2365
>gb|AY112109.1| Zea mays CL26172_1 mRNA sequence Length = 768 Score = 91.7 bits (46), Expect = 2e-15 Identities = 107/129 (82%) Strand = Plus / Plus Query: 219 tgttgcaaagacggcatttgcgattgtaagaccgagtatcgccatgagtgcaaggtaaat 278 ||||||||||| |||||| || ||||||| ||||||||| |||| || | |||||||| Sbjct: 77 tgttgcaaagatggcattcgcaattgtaatcccgagtatccccatcagccccaggtaaat 136 Query: 279 attcatccgagtttttgaccccgcactctcctctgcaatctctctgaccttctgtgcttc 338 ||||| |||| || || ||||||||||||||||||||| |||||||||||||||| Sbjct: 137 gttcatacgagnnnnngatcctgcactctcctctgcaatctctttgaccttctgtgcttc 196 Query: 339 gatcttggc 347 | |||||| Sbjct: 197 caccttggc 205 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 143 gctcataggtgacctgagcaaccaggccattgaaaattagacccagagcagca 195 |||| ||| |||||||||||||||| ||| ||||||| ||||||||||||||| Sbjct: 1 gctcgtagatgacctgagcaaccagaccaatgaaaatcagacccagagcagca 53 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 381 tttgaccttgccaaggcttttgaagaac 408 |||||||||||||||||||||||||||| Sbjct: 236 tttgaccttgccaaggcttttgaagaac 263
>emb|CR318644.8| Zebrafish DNA sequence from clone DKEYP-11H3 in linkage group 23, complete sequence Length = 92984 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 316 atctctctgaccttctgtgcttc 338 ||||||||||||||||||||||| Sbjct: 26234 atctctctgaccttctgtgcttc 26256
>gb|AC099062.2| Homo sapiens chromosome 1 clone RP5-1043L3, complete sequence Length = 101840 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 tctttcattcatctctttttt 109 ||||||||||||||||||||| Sbjct: 57048 tctttcattcatctctttttt 57068
>emb|AL020993.1|HS5O6 Human DNA sequence from clone RP1-5O6 on chromosome 22q12, complete sequence Length = 106008 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 ctctcctctgcaatctctctg 324 ||||||||||||||||||||| Sbjct: 34488 ctctcctctgcaatctctctg 34508
>dbj|AB159656.1| Thorea riekei chloroplast rbcL gene for ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, complete cds Length = 1467 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 cagctctttcattcatctctt 105 ||||||||||||||||||||| Sbjct: 775 cagctctttcattcatctctt 755
>ref|XM_226468.3| PREDICTED: Rattus norvegicus hydrocephalus-inducing protein (LOC292017), mRNA Length = 17592 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 304 ctctcctctgcaatctctctgacct 328 |||||||||||||||||| |||||| Sbjct: 12701 ctctcctctgcaatctctatgacct 12677
>ref|XM_425338.1| PREDICTED: Gallus gallus similar to cis-Golgi matrix protein GM130 (LOC427766), mRNA Length = 3324 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ctgagcaaccaggccattga 175 |||||||||||||||||||| Sbjct: 714 ctgagcaaccaggccattga 695
>emb|Z94054.1|HS125H23 Human DNA sequence from clone RP1-125H23 on chromosome 1q24 Contains the 5' end of the C1orf9 gene for chromosome 1 open reading frame 9 and two CpG islands, complete sequence Length = 52616 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 23204 agctctttctttcatctctttttt 23181
>emb|AL445467.6| Human DNA sequence from clone RP11-311M14 on chromosome X Contains the 5' end of the CTPS2 gene for CTP synthase II, the CALB3 gene for calbindin 3 (vitamin D-dependent calcium binding protein), the SYAP1 gene for synapse associated protein 1 SAP47 homolog (Drosophila) and two CpG islands, complete sequence Length = 166336 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ctttcattcatctctttttt 109 |||||||||||||||||||| Sbjct: 133041 ctttcattcatctctttttt 133022
>emb|BX510945.13| Zebrafish DNA sequence from clone CH211-59D17 in linkage group 21, complete sequence Length = 202152 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 91 tttcattcatctcttttttcattcttgt 118 |||||||| | ||||||||||||||||| Sbjct: 62725 tttcattcttttcttttttcattcttgt 62698
>emb|CR318652.16| Zebrafish DNA sequence from clone CH211-128O18 in linkage group 11, complete sequence Length = 179522 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 tctttcattcatctcttttt 108 |||||||||||||||||||| Sbjct: 60920 tctttcattcatctcttttt 60939
>gb|AC117416.8| Homo sapiens 3 BAC RP11-26P16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 129306 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 tctttcattcatctcttttt 108 |||||||||||||||||||| Sbjct: 40076 tctttcattcatctcttttt 40095
>gb|AC112507.7| Homo sapiens 3 BAC RP11-321C3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 184696 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 tttgaccttgccaaggcttt 400 |||||||||||||||||||| Sbjct: 155159 tttgaccttgccaaggcttt 155140
>gb|AC019215.4|AC019215 Homo sapiens BAC clone RP11-480M18 from 8, complete sequence Length = 192579 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 atctcttttttcattcttgt 118 |||||||||||||||||||| Sbjct: 48412 atctcttttttcattcttgt 48431
>emb|CR353496.1| Gallus gallus finished cDNA, clone ChEST249o6 Length = 910 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ctgagcaaccaggccattga 175 |||||||||||||||||||| Sbjct: 282 ctgagcaaccaggccattga 263
>gb|AF310683.1|AF310683 Pan troglodytes membrane protein CH1 gene, partial cds Length = 9623 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4662 agctctttctttcatctctttttt 4639
>gb|AF310681.1|AF310681 Pongo pygmaeus membrane protein CH1 gene, partial cds Length = 9654 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4670 agctctttctttcatctctttttt 4647
>gb|AF310325.1|AF310325 Homo sapiens isolate Yakut 290 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310324.1|AF310324 Homo sapiens isolate Yakut 263 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310323.1|AF310323 Homo sapiens isolate Yakut 257 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310322.1|AF310322 Homo sapiens isolate Swede S4 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310321.1|AF310321 Homo sapiens isolate Swede S20 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310320.1|AF310320 Homo sapiens isolate Swede 2 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310319.1|AF310319 Homo sapiens isolate Swede S17 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310318.1|AF310318 Homo sapiens isolate Swede S15 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310317.1|AF310317 Homo sapiens isolate Swede S1 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310316.1|AF310316 Homo sapiens isolate South Africa F1 SA1 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310315.1|AF310315 Homo sapiens isolate South Africa F5 Meje membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310314.1|AF310314 Homo sapiens isolate South Africa F4 Bemo membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310313.1|AF310313 Homo sapiens isolate South Africa F3 Jomok membrane protein CH1 gene, partial cds Length = 9626 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310312.1|AF310312 Homo sapiens isolate South Africa F2 Bh252 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310311.1|AF310311 Homo sapiens isolate Nigeria 9 membrane protein CH1 gene, partial cds Length = 9626 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310310.1|AF310310 Homo sapiens isolate Nigeria 8 membrane protein CH1 gene, partial cds Length = 9626 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310309.1|AF310309 Homo sapiens isolate Nigeria 4 membrane protein CH1 gene, partial cds Length = 9626 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310308.1|AF310308 Homo sapiens isolate Nigeria 15 membrane protein CH1 gene, partial cds Length = 9626 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310307.1|AF310307 Homo sapiens isolate Nigeria 11 membrane protein CH1 gene, partial cds Length = 9626 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310306.1|AF310306 Homo sapiens isolate South African F6 !Kung membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310305.1|AF310305 Homo sapiens isolate Kenya 5 membrane protein CH1 gene, partial cds Length = 9626 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310304.1|AF310304 Homo sapiens isolate Kenya 24 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310303.1|AF310303 Homo sapiens isolate Kenya 21 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310302.1|AF310302 Homo sapiens isolate Kenya 20 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310301.1|AF310301 Homo sapiens isolate Kenya 18 membrane protein CH1 gene, partial cds Length = 9626 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310300.1|AF310300 Homo sapiens isolate Japanese J18 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310299.1|AF310299 Homo sapiens isolate Japanese J17 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310298.1|AF310298 Homo sapiens isolate Japanese J16 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310297.1|AF310297 Homo sapiens isolate Indian 42 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310296.1|AF310296 Homo sapiens isolate Indian 39 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310295.1|AF310295 Homo sapiens isolate Indian 36 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310294.1|AF310294 Homo sapiens isolate Indian 34 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310293.1|AF310293 Homo sapiens isolate Indian 32 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310292.1|AF310292 Homo sapiens isolate Indian 31 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310291.1|AF310291 Homo sapiens isolate Hungarian Hun 789 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310290.1|AF310290 Homo sapiens isolate Hungarian Hun 788 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310289.1|AF310289 Homo sapiens isolate Hungarian Hun 786 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310288.1|AF310288 Homo sapiens isolate Hungarian Hun 779 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310287.1|AF310287 Homo sapiens isolate Hungarian Hun 775 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310286.1|AF310286 Homo sapiens isolate Finn F27 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310285.1|AF310285 Homo sapiens isolate Finn F23 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310284.1|AF310284 Homo sapiens isolate French Fr66-1 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310283.1|AF310283 Homo sapiens isolate Biaki Pygmy 10473 membrane protein CH1 gene, partial cds Length = 9621 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310282.1|AF310282 Homo sapiens isolate Biaki Pygmy 10472 membrane protein CH1 gene, partial cds Length = 9619 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310281.1|AF310281 Homo sapiens isolate French Fr23-1 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310280.1|AF310280 Homo sapiens isolate Mbuti Pygmy 10495 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310279.1|AF310279 Homo sapiens isolate Mbuti Pygmy 10496 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4656 agctctttctttcatctctttttt 4633
>gb|AF310278.1|AF310278 Homo sapiens isolate French Fr21-1 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310277.1|AF310277 Homo sapiens isolate French Fr2-1 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310276.1|AF310276 Homo sapiens isolate French Fr12-1 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310275.1|AF310275 Homo sapiens isolate Chinese CN24 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310274.1|AF310274 Homo sapiens isolate Chinese Chn28 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310273.1|AF310273 Homo sapiens isolate Chinese CN22 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310272.1|AF310272 Homo sapiens isolate Chinese CN111 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310271.1|AF310271 Homo sapiens isolate Chinese 1057393 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310270.1|AF310270 Homo sapiens isolate Chinese 1058406 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310269.1|AF310269 Homo sapiens isolate Italian berg43 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310268.1|AF310268 Homo sapiens isolate Italian berg41 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310267.1|AF310267 Homo sapiens isolate Italian berg40 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310266.1|AF310266 Homo sapiens isolate Chinese 1058642 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>gb|AF310265.1|AF310265 Homo sapiens isolate Chinese 1057959 membrane protein CH1 gene, partial cds Length = 9622 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 agctctttcattcatctctttttt 109 ||||||||| |||||||||||||| Sbjct: 4660 agctctttctttcatctctttttt 4637
>dbj|AB162342.1| Oncorhynchus mykiss genes, MHC class I a region, complete and partial cds Length = 103035 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 gaccttgccaaggcttttga 403 |||||||||||||||||||| Sbjct: 28890 gaccttgccaaggcttttga 28871
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 gatcttggccttcaccttga 358 |||||||||||||||||||| Sbjct: 6367496 gatcttggccttcaccttga 6367477
>dbj|AK098498.1| Homo sapiens cDNA FLJ25632 fis, clone STM03991 Length = 3425 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 315 aatctctctgaccttctgtgcttc 338 ||||||||||||||||||| |||| Sbjct: 2850 aatctctctgaccttctgtccttc 2827
>emb|BX927408.6| Zebrafish DNA sequence from clone DKEY-30I4 in linkage group 18, complete sequence Length = 90451 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tctttcattcatctcttttt 108 |||||||||||||||||||| Sbjct: 19074 tctttcattcatctcttttt 19055
>gb|AC104098.5| Mus musculus BAC clone RP24-372H3 from 5, complete sequence Length = 180886 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cttcctccattccacctctg 217 |||||||||||||||||||| Sbjct: 36316 cttcctccattccacctctg 36297
>gb|AF020407.1|AF020407 Dictyostelium discoideum WimA (wimA) gene, partial cds Length = 2396 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 attccacctctggtgttgcaaaga 229 |||||| ||||||||||||||||| Sbjct: 2070 attccatctctggtgttgcaaaga 2047
>dbj|AP005326.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-147K23, complete sequence Length = 65302 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 315 aatctctctgaccttctgtgcttc 338 ||||||||||||||||||| |||| Sbjct: 42655 aatctctctgaccttctgtccttc 42678
>dbj|AP001496.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-835E18, complete sequence Length = 179358 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 315 aatctctctgaccttctgtgcttc 338 ||||||||||||||||||| |||| Sbjct: 145150 aatctctctgaccttctgtccttc 145173 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,580,231 Number of Sequences: 3902068 Number of extensions: 4580231 Number of successful extensions: 98829 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98684 Number of HSP's gapped (non-prelim): 144 length of query: 437 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 415 effective length of database: 17,147,199,772 effective search space: 7116087905380 effective search space used: 7116087905380 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
