ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26a07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ224325.1|HVH224325 Hordeum vulgare cv. Haisa mRNA for cp33... 783 0.0
2ref|XM_476683.1| Oryza sativa (japonica cultivar-group), mRNA 76 1e-10
3ref|XM_507351.1| PREDICTED Oryza sativa (japonica cultivar-group... 76 1e-10
4ref|XM_506168.2| PREDICTED Oryza sativa (japonica cultivar-group... 76 1e-10
5dbj|AK104773.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
6dbj|AK099188.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
7dbj|AK067376.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
8dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
9dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
10emb|AJ272011.1|NPL272011 Nicotiana plumbaginifolia mRNA for olig... 44 0.44
11gb|AC164428.4| Mus musculus BAC clone RP24-150D18 from chromosom... 42 1.7
12gb|AC121861.3| Mus musculus BAC clone RP24-108P23 from chromosom... 42 1.7
13ref|XM_779770.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 1.7
14emb|AL670708.9| Mouse DNA sequence from clone RP23-125A21 on chr... 42 1.7
15ref|XM_511930.1| PREDICTED: Pan troglodytes LOC455180 (LOC455180... 40 6.8
16ref|NM_003110.4| Homo sapiens Sp2 transcription factor (SP2), mRNA 40 6.8
17gb|BC033814.2| Homo sapiens Sp2 transcription factor, mRNA (cDNA... 40 6.8
18gb|BC016680.2| Homo sapiens Sp2 transcription factor, mRNA (cDNA... 40 6.8
19ref|XM_382202.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 6.8
20gb|AC113025.9| Mus musculus chromosome 6, clone RP23-196D12, com... 40 6.8
21gb|AC107742.10| Mus musculus chromosome 15, clone RP23-331D7, co... 40 6.8
22gb|AC011291.8| Homo sapiens BAC clone RP11-67G7 from 2, complete... 40 6.8
23gb|AC018521.8| Homo sapiens chromosome 17, clone RP11-6N17, comp... 40 6.8
24gb|AF221986.1|AF221986 Calliactis parasitica peptidylglycine alp... 40 6.8
25ref|NM_001015654.1| Bos taurus Sp2 transcription factor (SP2), mRNA 40 6.8
26gb|AY893027.1| Synthetic construct Homo sapiens clone FLH119731.... 40 6.8
27gb|AY890560.1| Synthetic construct Homo sapiens clone FLH119735.... 40 6.8
28dbj|D28588.1|HUMKG1D Homo sapiens KIAA0048 mRNA, partial cds 40 6.8
29gb|BC005914.1| Homo sapiens Sp2 transcription factor, mRNA (cDNA... 40 6.8
30gb|BT020830.1| Bos taurus Sp2 transcription factor (SP2), mRNA, ... 40 6.8
31gb|AC006120.1|AC006120 Homo sapiens chromosome 17, clone hRPK.34... 40 6.8
32gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster... 40 6.8
33gb|M97190.1|HUMSP2A Human Sp2 protein mRNA, complete cds 40 6.8 
>emb|AJ224325.1|HVH224325 Hordeum vulgare cv. Haisa mRNA for cp33Hv protein
          Length = 1311

 Score =  783 bits (395), Expect = 0.0
 Identities = 466/494 (94%), Gaps = 3/494 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttttgtgaaccggtgccccagtcttacaactgaatcatantactacctgtctattagttt 60
            ||||||||||||||||||||  ||||||||||||||||    ||||||||||||||||||
Sbjct: 1144 ttttgtgaaccggtgccccaagcttacaactgaatcatct--ctacctgtctattagttt 1087

                                                                        
Query: 61   ttactaatagctggcagttgcctgtaagttgctcttttccatctcgcctccaaattgtcc 120
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1086 ttactaatagctggcagttgcctgtaagttgctcttttccatttcgcctccaaattgtcc 1027

                                                                        
Query: 121  tgaagtactagtgttattgtcgacctgtggctcagcctcagatccacgtgaggctgnnnn 180
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct: 1026 tgaagtaatagtgttattgtcgacctgtggctcagcctcagatccacgtgaggctgtttt 967

                                                                        
Query: 181  nnncttgctgtgactgngctgtgctaggagttgatccagctggagggttctgtgctgcca 240
               ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966  tt-cttgctgtgactgcgctgtgctaggagttgatccagctggagggttctgtgctgcca 908

                                                                        
Query: 241  gactaagtcggagtggcctcccatccagttccactccgtccatggcctgcaaggcagcct 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907  gactaagtcggagtggcctcccatccagttccactccgtccatggcctgcaaggcagcct 848

                                                                        
Query: 301  ttgcatcttgtatggtgtggaagganacaaanccaaaccccctcgaacgaccggtgtcac 360
            ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 847  ttgcatcttgtatggtgtggaaggagacaaagccaaaccccctcgaacgaccggtgtcac 788

                                                                        
Query: 361  gctcgaagattaccctggcaccaaccaagccaggctgcccttcaaatgccgncttgagtg 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 787  gctcgaagattaccctggcaccaaccaagccaggctgcccttcaaatgccgtcttgagtg 728

                                                                        
Query: 421  cgtcagcccgcacaccccaacccangttgccggcgtaaaccttgnatgtnccatnnnnaa 480
            |||||||||||||||||||||||| ||||||||||||||||||| |||| ||||    ||
Sbjct: 727  cgtcagcccgcacaccccaacccaggttgccggcgtaaaccttgtatgtcccatcgtcaa 668

                          
Query: 481  caacacncaancta 494
            |||||| ||| |||
Sbjct: 667  caacacgcaagcta 654
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>ref|XM_476683.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1299

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 209/267 (78%), Gaps = 3/267 (1%)
 Strand = Plus / Minus

                                                                       
Query: 188 ctgtgactgngctgtgctaggagttgatccagctggagggttctgtgctgccagactaag 247
           |||||||||  ||||||||||||   | |||||||  ||||||||| | |||| ||| ||
Sbjct: 971 ctgtgactgcactgtgctaggag---aaccagctgttgggttctgttccgccatactgag 915

                                                                       
Query: 248 tcggagtggcctcccatccagttccactccgtccatggcctgcaaggcagcctttgcatc 307
            |  |||||||| || |||||||||||||| ||||  |||| ||| ||||||| ||||||
Sbjct: 914 cctcagtggccttccttccagttccactccatccaatgcctccaatgcagcctgtgcatc 855

                                                                       
Query: 308 ttgtatggtgtggaagganacaaanccaaaccccctcgaacgaccggtgtcacgctcgaa 367
            | |   ||   |||||| || || || || ||||| || ||||||| ||| ||||||||
Sbjct: 854 ctctgcagtcctgaaggagacgaatccgaaacccctggaccgaccggagtcgcgctcgaa 795

                                                                       
Query: 368 gattaccctggcaccaaccaagccaggctgcccttcaaatgccgncttgagtgcgtcagc 427
           ||| ||||| ||| ||| |||||| |||||||| || || |||| | | || || || ||
Sbjct: 794 gatgaccctagcatcaagcaagccgggctgcccctcgaacgccgccctcagagcatcggc 735

                                      
Query: 428 ccgcacaccccaacccangttgccggc 454
            ||||||||||| |||| ||| |||||
Sbjct: 734 acgcacaccccaccccaggttcccggc 708
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>ref|XM_507351.1| PREDICTED Oryza sativa (japonica cultivar-group), P0455F03.24 mRNA
          Length = 1327

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 209/267 (78%), Gaps = 3/267 (1%)
 Strand = Plus / Minus

                                                                       
Query: 188 ctgtgactgngctgtgctaggagttgatccagctggagggttctgtgctgccagactaag 247
           |||||||||  ||||||||||||   | |||||||  ||||||||| | |||| ||| ||
Sbjct: 969 ctgtgactgcactgtgctaggag---aaccagctgttgggttctgttccgccatactgag 913

                                                                       
Query: 248 tcggagtggcctcccatccagttccactccgtccatggcctgcaaggcagcctttgcatc 307
            |  |||||||| || |||||||||||||| ||||  |||| ||| ||||||| ||||||
Sbjct: 912 cctcagtggccttccttccagttccactccatccaatgcctccaatgcagcctgtgcatc 853

                                                                       
Query: 308 ttgtatggtgtggaagganacaaanccaaaccccctcgaacgaccggtgtcacgctcgaa 367
            | |   ||   |||||| || || || || ||||| || ||||||| ||| ||||||||
Sbjct: 852 ctctgcagtcctgaaggagacgaatccgaaacccctggaccgaccggagtcgcgctcgaa 793

                                                                       
Query: 368 gattaccctggcaccaaccaagccaggctgcccttcaaatgccgncttgagtgcgtcagc 427
           ||| ||||| ||| ||| |||||| |||||||| || || |||| | | || || || ||
Sbjct: 792 gatgaccctagcatcaagcaagccgggctgcccctcgaacgccgccctcagagcatcggc 733

                                      
Query: 428 ccgcacaccccaacccangttgccggc 454
            ||||||||||| |||| ||| |||||
Sbjct: 732 acgcacaccccaccccaggttcccggc 706
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>ref|XM_506168.2| PREDICTED Oryza sativa (japonica cultivar-group), P0455F03.24 mRNA
          Length = 1390

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 209/267 (78%), Gaps = 3/267 (1%)
 Strand = Plus / Minus

                                                                       
Query: 188 ctgtgactgngctgtgctaggagttgatccagctggagggttctgtgctgccagactaag 247
           |||||||||  ||||||||||||   | |||||||  ||||||||| | |||| ||| ||
Sbjct: 986 ctgtgactgcactgtgctaggag---aaccagctgttgggttctgttccgccatactgag 930

                                                                       
Query: 248 tcggagtggcctcccatccagttccactccgtccatggcctgcaaggcagcctttgcatc 307
            |  |||||||| || |||||||||||||| ||||  |||| ||| ||||||| ||||||
Sbjct: 929 cctcagtggccttccttccagttccactccatccaatgcctccaatgcagcctgtgcatc 870

                                                                       
Query: 308 ttgtatggtgtggaagganacaaanccaaaccccctcgaacgaccggtgtcacgctcgaa 367
            | |   ||   |||||| || || || || ||||| || ||||||| ||| ||||||||
Sbjct: 869 ctctgcagtcctgaaggagacgaatccgaaacccctggaccgaccggagtcgcgctcgaa 810

                                                                       
Query: 368 gattaccctggcaccaaccaagccaggctgcccttcaaatgccgncttgagtgcgtcagc 427
           ||| ||||| ||| ||| |||||| |||||||| || || |||| | | || || || ||
Sbjct: 809 gatgaccctagcatcaagcaagccgggctgcccctcgaacgccgccctcagagcatcggc 750

                                      
Query: 428 ccgcacaccccaacccangttgccggc 454
            ||||||||||| |||| ||| |||||
Sbjct: 749 acgcacaccccaccccaggttcccggc 723
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>dbj|AK104773.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-B02, full
           insert sequence
          Length = 1327

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 209/267 (78%), Gaps = 3/267 (1%)
 Strand = Plus / Minus

                                                                       
Query: 188 ctgtgactgngctgtgctaggagttgatccagctggagggttctgtgctgccagactaag 247
           |||||||||  ||||||||||||   | |||||||  ||||||||| | |||| ||| ||
Sbjct: 969 ctgtgactgcactgtgctaggag---aaccagctgttgggttctgttccgccatactgag 913

                                                                       
Query: 248 tcggagtggcctcccatccagttccactccgtccatggcctgcaaggcagcctttgcatc 307
            |  |||||||| || |||||||||||||| ||||  |||| ||| ||||||| ||||||
Sbjct: 912 cctcagtggccttccttccagttccactccatccaatgcctccaatgcagcctgtgcatc 853

                                                                       
Query: 308 ttgtatggtgtggaagganacaaanccaaaccccctcgaacgaccggtgtcacgctcgaa 367
            | |   ||   |||||| || || || || ||||| || ||||||| ||| ||||||||
Sbjct: 852 ctctgcagtcctgaaggagacgaatccgaaacccctggaccgaccggagtcgcgctcgaa 793

                                                                       
Query: 368 gattaccctggcaccaaccaagccaggctgcccttcaaatgccgncttgagtgcgtcagc 427
           ||| ||||| ||| ||| |||||| |||||||| || || |||| | | || || || ||
Sbjct: 792 gatgaccctagcatcaagcaagccgggctgcccctcgaacgccgccctcagagcatcggc 733

                                      
Query: 428 ccgcacaccccaacccangttgccggc 454
            ||||||||||| |||| ||| |||||
Sbjct: 732 acgcacaccccaccccaggttcccggc 706
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>dbj|AK099188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110K07, full
           insert sequence
          Length = 1299

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 209/267 (78%), Gaps = 3/267 (1%)
 Strand = Plus / Minus

                                                                       
Query: 188 ctgtgactgngctgtgctaggagttgatccagctggagggttctgtgctgccagactaag 247
           |||||||||  ||||||||||||   | |||||||  ||||||||| | |||| ||| ||
Sbjct: 971 ctgtgactgcactgtgctaggag---aaccagctgttgggttctgttccgccatactgag 915

                                                                       
Query: 248 tcggagtggcctcccatccagttccactccgtccatggcctgcaaggcagcctttgcatc 307
            |  |||||||| || |||||||||||||| ||||  |||| ||| ||||||| ||||||
Sbjct: 914 cctcagtggccttccttccagttccactccatccaatgcctccaatgcagcctgtgcatc 855

                                                                       
Query: 308 ttgtatggtgtggaagganacaaanccaaaccccctcgaacgaccggtgtcacgctcgaa 367
            | |   ||   |||||| || || || || ||||| || ||||||| ||| ||||||||
Sbjct: 854 ctctgcagtcctgaaggagacgaatccgaaacccctggaccgaccggagtcgcgctcgaa 795

                                                                       
Query: 368 gattaccctggcaccaaccaagccaggctgcccttcaaatgccgncttgagtgcgtcagc 427
           ||| ||||| ||| ||| |||||| |||||||| || || |||| | | || || || ||
Sbjct: 794 gatgaccctagcatcaagcaagccgggctgcccctcgaacgccgccctcagagcatcggc 735

                                      
Query: 428 ccgcacaccccaacccangttgccggc 454
            ||||||||||| |||| ||| |||||
Sbjct: 734 acgcacaccccaccccaggttcccggc 708
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>dbj|AK067376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106F16, full
           insert sequence
          Length = 1389

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 209/267 (78%), Gaps = 3/267 (1%)
 Strand = Plus / Minus

                                                                       
Query: 188 ctgtgactgngctgtgctaggagttgatccagctggagggttctgtgctgccagactaag 247
           |||||||||  ||||||||||||   | |||||||  ||||||||| | |||| ||| ||
Sbjct: 985 ctgtgactgcactgtgctaggag---aaccagctgttgggttctgttccgccatactgag 929

                                                                       
Query: 248 tcggagtggcctcccatccagttccactccgtccatggcctgcaaggcagcctttgcatc 307
            |  |||||||| || |||||||||||||| ||||  |||| ||| ||||||| ||||||
Sbjct: 928 cctcagtggccttccttccagttccactccatccaatgcctccaatgcagcctgtgcatc 869

                                                                       
Query: 308 ttgtatggtgtggaagganacaaanccaaaccccctcgaacgaccggtgtcacgctcgaa 367
            | |   ||   |||||| || || || || ||||| || ||||||| ||| ||||||||
Sbjct: 868 ctctgcagtcctgaaggagacgaatccgaaacccctggaccgaccggagtcgcgctcgaa 809

                                                                       
Query: 368 gattaccctggcaccaaccaagccaggctgcccttcaaatgccgncttgagtgcgtcagc 427
           ||| ||||| ||| ||| |||||| |||||||| || || |||| | | || || || ||
Sbjct: 808 gatgaccctagcatcaagcaagccgggctgcccctcgaacgccgccctcagagcatcggc 749

                                      
Query: 428 ccgcacaccccaacccangttgccggc 454
            ||||||||||| |||| ||| |||||
Sbjct: 748 acgcacaccccaccccaggttcccggc 722
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 108/135 (80%)
 Strand = Plus / Plus

                                                                           
Query: 320     gaagganacaaanccaaaccccctcgaacgaccggtgtcacgctcgaagattaccctggc 379
               |||||| || || || || ||||| || ||||||| ||| ||||||||||| ||||| ||
Sbjct: 3155676 gaaggagacgaatccgaaacccctggaccgaccggagtcgcgctcgaagatgaccctagc 3155735

                                                                           
Query: 380     accaaccaagccaggctgcccttcaaatgccgncttgagtgcgtcagcccgcacacccca 439
               | ||| |||||| |||||||| || || |||| | | || || || || |||||||||||
Sbjct: 3155736 atcaagcaagccgggctgcccctcgaacgccgccctcagagcatcggcacgcacacccca 3155795

                              
Query: 440     acccangttgccggc 454
                |||| ||| |||||
Sbjct: 3155796 ccccaggttcccggc 3155810
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>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0455F03
          Length = 158201

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 108/135 (80%)
 Strand = Plus / Plus

                                                                         
Query: 320   gaagganacaaanccaaaccccctcgaacgaccggtgtcacgctcgaagattaccctggc 379
             |||||| || || || || ||||| || ||||||| ||| ||||||||||| ||||| ||
Sbjct: 70666 gaaggagacgaatccgaaacccctggaccgaccggagtcgcgctcgaagatgaccctagc 70725

                                                                         
Query: 380   accaaccaagccaggctgcccttcaaatgccgncttgagtgcgtcagcccgcacacccca 439
             | ||| |||||| |||||||| || || |||| | | || || || || |||||||||||
Sbjct: 70726 atcaagcaagccgggctgcccctcgaacgccgccctcagagcatcggcacgcacacccca 70785

                            
Query: 440   acccangttgccggc 454
              |||| ||| |||||
Sbjct: 70786 ccccaggttcccggc 70800
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>emb|AJ272011.1|NPL272011 Nicotiana plumbaginifolia mRNA for oligouridylate binding protein
           (ubp1 gene)
          Length = 1668

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 319 ggaagganacaaanccaaaccccctcga 346
           ||||||| ||||| ||||||||||||||
Sbjct: 725 ggaaggagacaaatccaaaccccctcga 698
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>gb|AC164428.4| Mus musculus BAC clone RP24-150D18 from chromosome 1, complete sequence
          Length = 170692

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 257   cctcccatccagttccactcc 277
             |||||||||||||||||||||
Sbjct: 40260 cctcccatccagttccactcc 40240
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>gb|AC121861.3| Mus musculus BAC clone RP24-108P23 from chromosome 1, complete sequence
          Length = 185558

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 257   cctcccatccagttccactcc 277
             |||||||||||||||||||||
Sbjct: 67347 cctcccatccagttccactcc 67367
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>ref|XM_779770.1| PREDICTED: Strongylocentrotus purpuratus similar to Nuclear
           receptor ROR-alpha (Nuclear receptor RZR-alpha)
           (LOC579666), partial mRNA
          Length = 3311

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 261 ccatccagttccactccgtcc 281
           |||||||||||||||||||||
Sbjct: 221 ccatccagttccactccgtcc 241
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>emb|AL670708.9| Mouse DNA sequence from clone RP23-125A21 on chromosome 4, complete
              sequence
          Length = 207097

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 257    cctcccatccagttccactcc 277
              |||||||||||||||||||||
Sbjct: 127580 cctcccatccagttccactcc 127600
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>ref|XM_511930.1| PREDICTED: Pan troglodytes LOC455180 (LOC455180), mRNA
          Length = 2712

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 ccctggcaccaaccaagcca 392
           ||||||||||||||||||||
Sbjct: 153 ccctggcaccaaccaagcca 172
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>ref|NM_003110.4| Homo sapiens Sp2 transcription factor (SP2), mRNA
          Length = 3031

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 ccctggcaccaaccaagcca 392
           ||||||||||||||||||||
Sbjct: 491 ccctggcaccaaccaagcca 510
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>gb|BC033814.2| Homo sapiens Sp2 transcription factor, mRNA (cDNA clone MGC:45308
           IMAGE:5208525), complete cds
          Length = 3031

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 ccctggcaccaaccaagcca 392
           ||||||||||||||||||||
Sbjct: 491 ccctggcaccaaccaagcca 510
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>gb|BC016680.2| Homo sapiens Sp2 transcription factor, mRNA (cDNA clone MGC:21349
           IMAGE:4338754), complete cds
          Length = 2876

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 ccctggcaccaaccaagcca 392
           ||||||||||||||||||||
Sbjct: 507 ccctggcaccaaccaagcca 526
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>ref|XM_382202.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02026.1)
           partial mRNA
          Length = 5715

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 213 gatccagctggagggttctg 232
           ||||||||||||||||||||
Sbjct: 896 gatccagctggagggttctg 877
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>gb|AC113025.9| Mus musculus chromosome 6, clone RP23-196D12, complete sequence
          Length = 223925

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 252    agtggcctcccatccagttc 271
              ||||||||||||||||||||
Sbjct: 176800 agtggcctcccatccagttc 176819
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>gb|AC107742.10| Mus musculus chromosome 15, clone RP23-331D7, complete sequence
          Length = 223952

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     tgctcttttccatctcgcct 109
              ||||||||||||||||||||
Sbjct: 124320 tgctcttttccatctcgcct 124339
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>gb|AC011291.8| Homo sapiens BAC clone RP11-67G7 from 2, complete sequence
          Length = 150214

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 58     tttttactaatagctggcag 77
              ||||||||||||||||||||
Sbjct: 147330 tttttactaatagctggcag 147311
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>gb|AC018521.8| Homo sapiens chromosome 17, clone RP11-6N17, complete sequence
          Length = 143494

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 373   ccctggcaccaaccaagcca 392
             ||||||||||||||||||||
Sbjct: 80670 ccctggcaccaaccaagcca 80651
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>gb|AF221986.1|AF221986 Calliactis parasitica peptidylglycine alpha-amidating monooxygenase
            gene, complete cds
          Length = 23859

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 184  cttgctgtgactgngctgtgcta 206
            ||||||||||||| |||||||||
Sbjct: 9722 cttgctgtgactgtgctgtgcta 9700
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>ref|NM_001015654.1| Bos taurus Sp2 transcription factor (SP2), mRNA
          Length = 2592

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 ccctggcaccaaccaagcca 392
           ||||||||||||||||||||
Sbjct: 561 ccctggcaccaaccaagcca 580
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>gb|AY893027.1| Synthetic construct Homo sapiens clone FLH119731.01L Sp2
           transcription factor (SP2) mRNA, partial cds
          Length = 1821

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 ccctggcaccaaccaagcca 392
           ||||||||||||||||||||
Sbjct: 456 ccctggcaccaaccaagcca 475
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>gb|AY890560.1| Synthetic construct Homo sapiens clone FLH119735.01X Sp2
           transcription factor (SP2) mRNA, complete cds
          Length = 1821

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 ccctggcaccaaccaagcca 392
           ||||||||||||||||||||
Sbjct: 456 ccctggcaccaaccaagcca 475
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>dbj|D28588.1|HUMKG1D Homo sapiens KIAA0048 mRNA, partial cds
          Length = 3288

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 ccctggcaccaaccaagcca 392
           ||||||||||||||||||||
Sbjct: 790 ccctggcaccaaccaagcca 809
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>gb|BC005914.1| Homo sapiens Sp2 transcription factor, mRNA (cDNA clone
           IMAGE:4095335), complete cds
          Length = 1848

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 ccctggcaccaaccaagcca 392
           ||||||||||||||||||||
Sbjct: 517 ccctggcaccaaccaagcca 536
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>gb|BT020830.1| Bos taurus Sp2 transcription factor (SP2), mRNA, complete cds
          Length = 2592

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 ccctggcaccaaccaagcca 392
           ||||||||||||||||||||
Sbjct: 561 ccctggcaccaaccaagcca 580
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>gb|AC006120.1|AC006120 Homo sapiens chromosome 17, clone hRPK.346_K_10, complete sequence
          Length = 168753

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tagctggcagttgcctgtaa 87
             ||||||||||||||||||||
Sbjct: 16640 tagctggcagttgcctgtaa 16621
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>gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster, complete genome
          Length = 1267782

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     ttactaatagctggcagttg 80
              ||||||||||||||||||||
Sbjct: 246694 ttactaatagctggcagttg 246713
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>gb|M97190.1|HUMSP2A Human Sp2 protein mRNA, complete cds
          Length = 2063

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 ccctggcaccaaccaagcca 392
           ||||||||||||||||||||
Sbjct: 489 ccctggcaccaaccaagcca 508


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,697,583
Number of Sequences: 3902068
Number of extensions: 2697583
Number of successful extensions: 46752
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46689
Number of HSP's gapped (non-prelim): 56
length of query: 504
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 482
effective length of database: 17,147,199,772
effective search space: 8264950290104
effective search space used: 8264950290104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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