>XYNB_PRUPE (P83344) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152)|
           (Fragment)
          Length = 461

 Score = 76.3 bits (186), Expect = 8e-14
 Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 1/164 (0%)
 Frame = -3

Query: 671 SYRFYQGNXVYKFGYGFSYSKFSRQLAVSGTGNKAPRTNLLAGLTATPSADGGAXYAVEE 492
           +YRFY G  V+ FG G SY+ F+  LA   T    P T+L A      +A+         
Sbjct: 297 TYRFYIGPVVFPFGLGLSYTTFAHNLAHGPTLVSVPLTSLKA------TANSTMLSKTVR 350

Query: 491 IGADGCEQLK-FPAVVEVQNHGPLDGKHSVLMFLRWPNATGGRPVSQLIGFRTQHLKAGE 315
           +    C  L      V+V+N G +DG H++L+F   P+        QL+GF   H+  G 
Sbjct: 351 VSHPDCNALSPLDVHVDVKNTGSMDGTHTLLVFTSPPDGKWASS-KQLMGFHKIHIATGS 409

Query: 314 KASLTFDVRPCEHFSRAREDGKKVIDAGSHFLKVGKDEHEISFE 183
           +  +   V  C+H S     G + I  G H L++G   H +S +
Sbjct: 410 EKRVRIAVHVCKHLSVVDRFGIRRIPLGEHKLQIGDLSHHVSLQ 453

>BGLX_ECOLI (P33363) Periplasmic beta-glucosidase precursor (EC 3.2.1.21)|
            (Gentiobiase) (Cellobiase) (Beta-D-glucoside
            glucohydrolase)
          Length = 765

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 47/157 (29%), Positives = 67/157 (42%), Gaps = 6/157 (3%)
 Frame = -3

Query: 644  VYKFGYGFSYSKFSRQLAVSGTGNKAPRTNLLAGLTATPSADGGAXYAVEEIGADGCEQL 465
            +Y FGYG SY+ F+    VS     AP          T   DG                 
Sbjct: 639  LYPFGYGLSYTTFT----VSDVKLSAP----------TMKRDG----------------- 667

Query: 464  KFPAVVEVQNHGPLDGKHSVLMFLRWPNATGGRPVSQLIGFRTQHLKAGEKASLTF--DV 291
            K  A V+V N G  +G   V M+L+   A+  RPV QL GF    LK GE  +++F  D+
Sbjct: 668  KVTASVQVTNTGKREGATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQTVSFPIDI 727

Query: 290  RPCEHFSRA----REDGKKVIDAGSHFLKVGKDEHEI 192
               + +++      E GK  +  G+   +V K E E+
Sbjct: 728  EALKFWNQQMKYDAEPGKFNVFIGTDSARVKKGEFEL 764

>BGLX_SALTY (Q56078) Periplasmic beta-glucosidase precursor (EC 3.2.1.21)|
           (Gentiobiase) (Cellobiase) (Beta-D-glucoside
           glucohydrolase) (T-cell inhibitor)
          Length = 765

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 37/118 (31%), Positives = 51/118 (43%)
 Frame = -3

Query: 644 VYKFGYGFSYSKFSRQLAVSGTGNKAPRTNLLAGLTATPSADGGAXYAVEEIGADGCEQL 465
           +Y FGYG SY+ F+    VS     +P          T   DG                 
Sbjct: 639 LYPFGYGLSYTTFT----VSDVTLSSP----------TMQRDG----------------- 667

Query: 464 KFPAVVEVQNHGPLDGKHSVLMFLRWPNATGGRPVSQLIGFRTQHLKAGEKASLTFDV 291
           K  A VEV N G  +G   + M+L+   A+  RPV QL GF    LK GE+ +++F +
Sbjct: 668 KVTASVEVTNTGKREGATVIQMYLQDVTASMSRPVKQLKGFEKITLKPGERKTVSFPI 725

>BGLS_KLUMA (P07337) Beta-glucosidase precursor (EC 3.2.1.21) (Gentiobiase)|
            (Cellobiase) (Beta-D-glucoside glucohydrolase)
          Length = 845

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 40/164 (24%), Positives = 65/164 (39%), Gaps = 5/164 (3%)
 Frame = -3

Query: 668  YRFY---QGNXVYKFGYGFSYSKFSRQLAVSGTGNKAPRTNLLAGLTATPSADGGAXYAV 498
            YR+Y   Q    + FGYG SY+ F   ++                            + V
Sbjct: 700  YRYYEKLQRKVAFPFGYGLSYTTFELDIS---------------------------DFKV 732

Query: 497  EEIGADGCEQLKFPAVVEVQNHGP-LDGKHSVLMFLRWPNATGGRPVSQLIGFRTQHLKA 321
             +         K    V+V+N G    G   V ++    N+   RPV +L GF   HL+ 
Sbjct: 733  TDD--------KIDISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELKGFEKVHLEP 784

Query: 320  GEKASLTFDVRPCEHFSRARED-GKKVIDAGSHFLKVGKDEHEI 192
            GEK ++  ++   +  S   E+ GK  ++AG + + VG    +I
Sbjct: 785  GEKKTVNIELELKDAISYFNEELGKWHVEAGEYLVSVGTSSDDI 828

>BGLB_CLOTM (P14002) Thermostable beta-glucosidase B (EC 3.2.1.21)|
           (Gentiobiase) (Cellobiase) (Beta-D-glucoside
           glucohydrolase)
          Length = 754

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 41/188 (21%), Positives = 79/188 (42%), Gaps = 7/188 (3%)
 Frame = -3

Query: 668 YRFYQGNXV---YKFGYGFSYSKFSRQLAVSGTGNKAPRTNLLAGLTATPSADGGAXYAV 498
           YR+Y    +   + FG+G SY+KF  + +      K    N +  ++             
Sbjct: 529 YRYYDTKGIEPLFPFGHGLSYTKF--EYSDISVDKKDVSDNSIINVS------------- 573

Query: 497 EEIGADGCEQLKFPAVVEVQNHGPLDGKHSVLMFLRWPNATGGRPVSQLIGFRTQHLKAG 318
                           V+V+N G + GK  V ++++   ++  RP  +L GF    L  G
Sbjct: 574 ----------------VKVKNVGKMAGKEIVQLYVKDVKSSVRRPEKELKGFEKVFLNPG 617

Query: 317 EKASLTF--DVRPCEHFSRAREDGKKVIDAGSHFLKVGKDEHEISFEA*TR--SSILVLA 150
           E+ ++TF  D R   +++   +D    +++G   + +G+   +I  +   R  S++ +  
Sbjct: 618 EEKTVTFTLDKRAFAYYNTQIKDWH--VESGEFLILIGRSSRDIVLKESVRVNSTVKIRK 675

Query: 149 RVKDPSAV 126
           R    SAV
Sbjct: 676 RFTVNSAV 683

>FOXN1_HUMAN (O15353) Forkhead box protein N1 (Transcription factor winged-helix|
           nude)
          Length = 648

 Score = 36.2 bits (82), Expect = 0.092
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
 Frame = -3

Query: 518 GGAXYAVEEIGADGCEQLKFPAVVEVQNHGPLDGK----HSVLMFLRWPNA-TGGRPVSQ 354
           GG  Y +  +G+   +  +         H PL  K    +S+L+F+   N+ TG  PVS+
Sbjct: 237 GGGSYPIPYLGSSHYQYQRMAPQASTDGHQPLFPKPIYSYSILIFMALKNSKTGSLPVSE 296

Query: 353 LIGFRTQH 330
           +  F T+H
Sbjct: 297 IYNFMTEH 304

>FOXN1_MOUSE (Q61575) Forkhead box protein N1 (Transcription factor winged-helix|
           nude) (Hepatocyte nuclear factor 3 forkhead homolog 11)
           (HNF-3/forkhead homolog 11) (HFH-11)
          Length = 648

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
 Frame = -3

Query: 518 GGAXYAVEEIGADGCEQLKFPAVVEVQNHGPLDGK----HSVLMFLRWPNA-TGGRPVSQ 354
           GG  Y V  +G+      +       + H PL  K    +S+L+F+   N+ TG  PVS+
Sbjct: 237 GGGSYPVPYLGSPHYPYQRIAPQANAEGHQPLFPKPIYSYSILIFMALKNSKTGSLPVSE 296

Query: 353 LIGFRTQH 330
           +  F T+H
Sbjct: 297 IYNFMTEH 304

>BGLS_BUTFI (P16084) Beta-glucosidase A (EC 3.2.1.21) (Gentiobiase)|
           (Cellobiase) (Beta-D-glucoside glucohydrolase)
          Length = 830

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 34/116 (29%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
 Frame = -3

Query: 641 YKFGYGFSYSKFSRQLAVSGTGNKAPRTNLLAGLTATPSADGGAXYAVEEIG-ADGCEQL 465
           Y FGYG SY+ F                 LL    A P        A +E+G +D     
Sbjct: 308 YPFGYGLSYTTF-----------------LLEDYKAEPF----VASAADEVGKSDSDLAD 346

Query: 464 KFPAVVEVQNHGPLDGKHSVLMFLRWPNATGGRPVSQLIGF-RTQHLKAGEKASLT 300
              A V V N G + GK  V ++   P    G+P   L G+ +T+ L+ GE   +T
Sbjct: 347 AIVASVTVTNIGKIPGKEVVQLYYSAPQGKLGKPAKVLGGYAKTRLLQPGESQRVT 402

>BGLS_RUMAL (P15885) Beta-glucosidase (EC 3.2.1.21) (Gentiobiase) (Cellobiase)|
           (Beta-D-glucoside glucohydrolase)
          Length = 947

 Score = 33.9 bits (76), Expect = 0.46
 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
 Frame = -3

Query: 515 GAXYAVEEIGADGCEQLKFPAVV-EVQNHGPLDGKHSVLMFLRWPNATGGRPVSQLIGF- 342
           G  Y   EI A+G +      +  +V+N G   GK  V ++L  PN   G+    L GF 
Sbjct: 271 GLSYTQFEISAEGRKTDDGVVITAKVKNIGSAAGKEVVQVYLEAPNCKLGKAARVLCGFE 330

Query: 341 RTQHLKAGEKASLTFDV 291
           +T+ L   E+ +LT +V
Sbjct: 331 KTKVLAPNEEQTLTIEV 347

>ILF3_BRARE (Q6NXA4) Interleukin enhancer-binding factor 3 homolog|
          Length = 833

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 399 VPPVAQRDGRASGEPADWVPNPASQGRREGQ 307
           +PP+    G  SG P+D +PNP  +GR  G+
Sbjct: 606 MPPMHTGFGMVSGPPSDMMPNPRGRGRGRGR 636

>BGL2_SACFI (P22507) Beta-glucosidase 2 precursor (EC 3.2.1.21) (Gentiobiase)|
            (Cellobiase) (Beta-D-glucoside glucohydrolase)
          Length = 880

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
 Frame = -3

Query: 488  GADGCEQLKFPAVVEVQNHGPLDGKHSVLMFLRWPNATGGRPVSQLIGFRTQHLKAGEKA 309
            G D   ++ +   V+VQN G    K    ++L+ P         QL GF    L  GEK 
Sbjct: 774  GNDALWEVAYKVEVDVQNLGNSTDKFVPQLYLKHPEDGKFETPVQLRGFEKVELSPGEKK 833

Query: 308  SLTFDV--RPCEHFSRAREDGKKVIDAGSHFLKVGKDEHEI 192
            ++ F++  R    +   R+    ++++G++   +G   ++I
Sbjct: 834  TVEFELLRRDLSVWDTTRQSW--IVESGTYEALIGVAVNDI 872

>FRS3_HUMAN (O43559) Fibroblast growth factor receptor substrate 3 (FGFR|
           substrate 3) (Suc1-associated neurotrophic factor target
           2) (SNT-2) (FGFR signalling adaptor SNT2)
          Length = 491

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 28/80 (35%), Positives = 34/80 (42%), Gaps = 6/80 (7%)
 Frame = +1

Query: 367 RPPVALGHRRNISTECFPSRGPWFCTSTTAGNLSCSHPSAPISST-AXLAPPSALGVAVR 543
           +PP ALG+  +  +   P  GP F         S  HPS    ST A +AP       V 
Sbjct: 134 QPPNALGYTVSSFSNGCPGEGPRFSAPRRLSTSSLRHPSLGEESTHALIAPDEQSHTYVN 193

Query: 544 -PAS----RFVRGALLPVPE 588
            PAS    R  R  L P+PE
Sbjct: 194 TPASEDDHRRGRHCLQPLPE 213

>DONS_MOUSE (Q9QXP4) Downstream neighbor of Son protein (Protein 3SG)|
          Length = 560

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 33/137 (24%), Positives = 51/137 (37%), Gaps = 18/137 (13%)
 Frame = +1

Query: 217 LRKCEPASITFLPSSLALLKCSHGLTSNVRLAFSPALRCWVRNPISWLTGRPPVALGHRR 396
           ++ C    +T LP S+   K S  L    R AF  AL  W+    SWL   P +    + 
Sbjct: 182 VQHCRATEVT-LPQSIQDPKLSTAL----RCAFQQALVYWLHPAFSWLPLFPRIGADRKM 236

Query: 397 NISTECFPS--------RGPWFCTSTTAGNL----------SCSHPSAPISSTAXLAPPS 522
              T  + +           W  + T+  NL           CS+    +   A LA  S
Sbjct: 237 AAKTSPWSADETLQHALMSDWSVSFTSLYNLLKTKLCPYFYVCSYQFTVLFRAAGLAGSS 296

Query: 523 ALGVAVRPASRFVRGAL 573
            +   + P +R +R A+
Sbjct: 297 VITALISPTTRGLREAM 313

>TRI36_HUMAN (Q9NQ86) Tripartite motif protein 36 (Zinc-binding protein Rbcc728)|
           (RING finger protein 98)
          Length = 728

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
 Frame = +1

Query: 301 VRLAFSPALRCWVRNPISWLTGRPPVALGHRRNISTECFPSRGPWFCTSTTAGNLSCSHP 480
           V +A S  L+ W+R+P   ++ R     GH       CF S  P+  T  T G      P
Sbjct: 589 VGVASSDKLQEWLRSPRDAVSPRYEQDSGHDSGSEDACFDSSQPF--TLVTIGMQKFFIP 646

Query: 481 SAPISS----TAXLAPPSALGV 534
            +P SS       L  P+++G+
Sbjct: 647 KSPTSSNEPENRVLPMPTSIGI 668

>ZN516_MOUSE (Q7TSH3) Zinc finger protein 516|
          Length = 1157

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 18/40 (45%), Positives = 22/40 (55%)
 Frame = -2

Query: 438 EPRSPGREALCADVPPVAQRDGRASGEPADWVPNPASQGR 319
           +P SPG     AD P +A+     SGE A  VP PAS G+
Sbjct: 556 QPSSPGSACAIADSPGLAEEVVDDSGEEA--VPEPASGGQ 593

>CIC_MOUSE (Q924A2) Protein capicua homolog|
          Length = 1606

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
 Frame = +1

Query: 280  SHGLTSNVRLAFS---PALRCWVRNPISWLTGRPPVALGHRRNISTECFPSRGPWFCTST 450
            S+G TS+V L F+   P+   +V+  +S   G+ P+    +  +S    P   P  CT++
Sbjct: 1029 SYGPTSSVALGFTSLGPSGPAFVQPLLS--AGQAPLLAPGQVGVSPVPSPQLPP-ACTAS 1085

Query: 451  TAGNLSCSHPSAPISSTAXLAPPS 522
                ++  +P +P  ++A L PPS
Sbjct: 1086 GGPVITAFYPGSPAPTSAPLGPPS 1109

>ZEP1_MOUSE (Q03172) Zinc finger protein 40 (Transcription factor alphaA-CRYBP1)|
            (Alpha A-crystallin-binding protein I) (Alpha A-CRYBP1)
          Length = 2688

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
 Frame = +1

Query: 373  PVALGHRRNI-STECFPSRGPWFCTSTTAGNLSCSHPSAPISSTAXLAPPSALGVAVRPA 549
            P + GH+ ++ S+E    R P       AGN +   P A +  ++   PP+   +  +PA
Sbjct: 2280 PRSPGHQLSVHSSESDVLRSP------AAGNPAAGSPGAAVQDSSVGLPPAVAQLNPQPA 2333

Query: 550  SRFVRGALLPVPETASWRENLE*LKPXPNL 639
            +R +  ++ P P++   ++ +  L+P P L
Sbjct: 2334 AR-ISSSVSPHPDSQDQKQQII-LQPPPGL 2361

>TEGU_EBV (P03186) Large tegument protein|
          Length = 3149

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = +1

Query: 475 HPSAPISSTAXLAPPSALGVAVRPASRFVRGALLPVPETASWRENLE*LKPXPN 636
           H S P S T   AP S +  +V P+ R      +P+P+ A     +    P P+
Sbjct: 471 HQSPPASPTPHPAPVSTIAPSVTPSPRLPLQIPIPLPQAAPSNPKIPLTTPSPS 524

>THIC_CORDI (P61424) Thiamine biosynthesis protein thiC|
          Length = 599

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = -2

Query: 423 GREALCADVPPVAQRDGRASGEPADWVPNP--ASQGRREGQPHVRRQAM 283
           GRE   AD    AQR G AS E     P P  A QG+R  Q H  RQ +
Sbjct: 89  GRERNLADDGRSAQRRGAASLEWKGVKPTPRRAKQGKRVTQMHYARQGI 137

>TRI36_MOUSE (Q80WG7) Tripartite motif protein 36 (Haprin) (Acrosome RBCC|
           protein)
          Length = 729

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
 Frame = +1

Query: 301 VRLAFSPALRCWVRNPISWLTGRPPVALGHRRNISTECFPSRGPWFCTSTTAGNLSCSHP 480
           V +A S  L+ W+R+P    + R     GH       CF S  P+  T  T G      P
Sbjct: 590 VGVASSDKLQEWLRSPRDAASPRYEQDSGHDSGSEDACFDSSQPF--TLVTIGMKKFFIP 647

Query: 481 SAPISS----TAXLAPPSALGV 534
            +P SS       L  P+++G+
Sbjct: 648 KSPTSSNEPENRVLPMPTSIGI 669

>ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)|
          Length = 2469

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 22/71 (30%), Positives = 25/71 (35%)
 Frame = -2

Query: 423  GREALCADVPPVAQRDGRASGEPADWVPNPASQGRREGQPHVRRQAMRAL*QGEGGWQEG 244
            GR     D PP   R            P P SQ +    P  +R+A        G  Q  
Sbjct: 2351 GRAPSAPDKPPRTPRKQATPSRVLPTKPKPNSQNKPRPPPSEQRKA------EPGHTQRK 2404

Query: 243  DRCRLTFPQGR 211
            DR    FPQGR
Sbjct: 2405 DRLGKAFPQGR 2415


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,825,234
Number of Sequences: 219361
Number of extensions: 1757638
Number of successful extensions: 5686
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 5447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5680
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6541540170
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)