ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd25k16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_517811.1| PREDICTED: Pan troglodytes hypothetical protein... 44 0.45
2gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 44 0.45
3ref|NM_194283.3| Homo sapiens DnaJ homology subfamily A member 5... 44 0.45
4ref|NM_001012339.2| Homo sapiens DnaJ homology subfamily A membe... 44 0.45
5dbj|AK127749.1| Homo sapiens cDNA FLJ45849 fis, clone OCBBF2014745 44 0.45
6emb|CR610463.1| full-length cDNA clone CS0DJ002YC08 of T cells (... 44 0.45
7gb|AC008795.7| Homo sapiens chromosome 5 clone CTD-2052F19, comp... 44 0.45
8gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.45
9gb|AY177688.1| Homo sapiens GS3 protein mRNA, complete cds 44 0.45
10gb|BC050472.1| Homo sapiens DnaJ homology subfamily A member 5, ... 44 0.45
11gb|AY258422.1| Homo sapiens DnaJ domain protein mRNA, complete cds 44 0.45
12emb|CR626857.1| Rice Cluster I (RC-I), uncultured archeon clone ... 44 0.45
13gb|AC097447.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
14dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
15gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
16gb|AC102101.7| Mus musculus chromosome 15, clone RP23-74N15, com... 40 7.1
17ref|XM_976393.1| PREDICTED: Mus musculus RIKEN cDNA 4930461P20 g... 40 7.1
18ref|XM_976430.1| PREDICTED: Mus musculus RIKEN cDNA 4930461P20 g... 40 7.1
19ref|XM_127961.7| PREDICTED: Mus musculus RIKEN cDNA 4930461P20 g... 40 7.1
20ref|XM_906184.2| PREDICTED: Mus musculus RIKEN cDNA 4930461P20 g... 40 7.1
21gb|AC113244.19| Mus musculus chromosome 19, clone RP23-172E2, co... 40 7.1
22emb|CR792425.6| Zebrafish DNA sequence from clone DKEY-81N9 in l... 40 7.1
23emb|AJ786317.1| Streptomyces fradiae putative neomycin biosynthe... 40 7.1
24emb|AJ843080.1| Streptomyces fradiae neomycin biosynthetic gene ... 40 7.1
25gb|AC093024.7| Homo sapiens 12 BAC RP11-12L19 (Roswell Park Canc... 40 7.1
26gb|AE014238.1| Streptococcus agalactiae 2603V/R section 48 of 10... 40 7.1
27gb|AY831460.1| Pseudomonas putida strain GJ31 nahINLOMKJX gene c... 40 7.1
28emb|AL766848.1|SAG766848 Streptococcus agalactiae NEM316 complet... 40 7.1
29gb|AC087113.11| Mus Musculus Strain C57BL6/J Chromosome 15 BAC, ... 40 7.1
30gb|AC127020.16| Medicago truncatula clone mth2-9p1, complete seq... 40 7.1
31dbj|AB211959.1| Streptomyces fradiae orf6, neoU, neoT, neoS, neo... 40 7.1
32gb|AF492384.1| Rattus norvegicus putative regulation protein GS3... 40 7.1
33gb|AC008842.6| Homo sapiens chromosome 5 clone CTD-2155H8, compl... 40 7.1
34dbj|AK020688.1| Mus musculus adult female vagina cDNA, RIKEN ful... 40 7.1
35dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
36gb|AC010165.10|AC010165 Homo sapiens chromosome 5 clone RP11-17J... 40 7.1
37dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.1
38dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
39gb|AF246323.1|AF246323 Acidithiobacillus ferroxidans pyruvate ki... 40 7.1
40dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 7.1
41dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 7.1
42gb|BC086587.1| Rattus norvegicus putative regulation protein GS3... 40 7.1
43emb|AL133247.1|CNS01DUK BAC sequence from the SPG4 candidate reg... 40 7.1
44emb|CT027588.10| Mouse DNA sequence from clone RP23-461P14 on ch... 40 7.1
45gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 7.1
46emb|AJ629247.1| Streptomyces fradiae neomycin biosynthesis gene ... 40 7.1
47gb|DQ294599.1| Spiromyces aspiralis isolate AFTOL-ID-185 RNA pol... 40 7.1
48dbj|AB047857.1| Homo sapiens SRD5A2 gene for steroid 5 alpha-red... 40 7.1 
>ref|XM_517811.1| PREDICTED: Pan troglodytes hypothetical protein XP_517811
            (LOC461926), mRNA
          Length = 1506

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 431  acccaaaggaaagaaaaccaaa 452
            ||||||||||||||||||||||
Sbjct: 1278 acccaaaggaaagaaaaccaaa 1299
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 119    gccggagtgctcgatggcgccg 140
              ||||||||||||||||||||||
Sbjct: 291738 gccggagtgctcgatggcgccg 291759
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>ref|NM_194283.3| Homo sapiens DnaJ homology subfamily A member 5 (DNAJA5), transcript
            variant 1, mRNA
          Length = 6218

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 431  acccaaaggaaagaaaaccaaa 452
            ||||||||||||||||||||||
Sbjct: 1730 acccaaaggaaagaaaaccaaa 1751
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>ref|NM_001012339.2| Homo sapiens DnaJ homology subfamily A member 5 (DNAJA5), transcript
            variant 2, mRNA
          Length = 6083

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 431  acccaaaggaaagaaaaccaaa 452
            ||||||||||||||||||||||
Sbjct: 1595 acccaaaggaaagaaaaccaaa 1616
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>dbj|AK127749.1| Homo sapiens cDNA FLJ45849 fis, clone OCBBF2014745
          Length = 2725

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 431  acccaaaggaaagaaaaccaaa 452
            ||||||||||||||||||||||
Sbjct: 1160 acccaaaggaaagaaaaccaaa 1181
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>emb|CR610463.1| full-length cDNA clone CS0DJ002YC08 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 1388

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 431 acccaaaggaaagaaaaccaaa 452
           ||||||||||||||||||||||
Sbjct: 688 acccaaaggaaagaaaaccaaa 709
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>gb|AC008795.7| Homo sapiens chromosome 5 clone CTD-2052F19, complete sequence
          Length = 113750

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 431   acccaaaggaaagaaaaccaaa 452
             ||||||||||||||||||||||
Sbjct: 53496 acccaaaggaaagaaaaccaaa 53475
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 489     cgaccgcgcccgcggcggcggc 510
               ||||||||||||||||||||||
Sbjct: 2896871 cgaccgcgcccgcggcggcggc 2896892
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>gb|AY177688.1| Homo sapiens GS3 protein mRNA, complete cds
          Length = 2322

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 431  acccaaaggaaagaaaaccaaa 452
            ||||||||||||||||||||||
Sbjct: 1604 acccaaaggaaagaaaaccaaa 1625
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>gb|BC050472.1| Homo sapiens DnaJ homology subfamily A member 5, mRNA (cDNA clone
           IMAGE:6471558), partial cds
          Length = 1622

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 431 acccaaaggaaagaaaaccaaa 452
           ||||||||||||||||||||||
Sbjct: 895 acccaaaggaaagaaaaccaaa 916
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>gb|AY258422.1| Homo sapiens DnaJ domain protein mRNA, complete cds
          Length = 2315

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 431  acccaaaggaaagaaaaccaaa 452
            ||||||||||||||||||||||
Sbjct: 1598 acccaaaggaaagaaaaccaaa 1619
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>emb|CR626857.1| Rice Cluster I (RC-I), uncultured archeon clone 3D10 complete
            sequence
          Length = 36858

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 137  gccggccgttgccaaggatggt 158
            ||||||||||||||||||||||
Sbjct: 8508 gccggccgttgccaaggatggt 8487
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>gb|AC097447.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0042K08, complete sequence
          Length = 117839

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 500   gcggcggcggcatgccggcaccggc 524
             |||||||||||| ||||||||||||
Sbjct: 38295 gcggcggcggcaagccggcaccggc 38271
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 500     gcggcggcggcatgccggcaccggc 524
               |||||||||||| ||||||||||||
Sbjct: 3923527 gcggcggcggcaagccggcaccggc 3923503
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 500     gcggcggcggcatgccggcaccggc 524
               |||||||||||| ||||||||||||
Sbjct: 3923448 gcggcggcggcaagccggcaccggc 3923424
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>gb|AC102101.7| Mus musculus chromosome 15, clone RP23-74N15, complete sequence
          Length = 191261

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 433   ccaaaggaaagaaaaccaaa 452
             ||||||||||||||||||||
Sbjct: 75524 ccaaaggaaagaaaaccaaa 75543
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>ref|XM_976393.1| PREDICTED: Mus musculus RIKEN cDNA 4930461P20 gene, transcript
            variant 2 (4930461P20Rik), mRNA
          Length = 2011

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 433  ccaaaggaaagaaaaccaaa 452
            ||||||||||||||||||||
Sbjct: 1487 ccaaaggaaagaaaaccaaa 1506
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>ref|XM_976430.1| PREDICTED: Mus musculus RIKEN cDNA 4930461P20 gene, transcript
            variant 3 (4930461P20Rik), mRNA
          Length = 1897

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 433  ccaaaggaaagaaaaccaaa 452
            ||||||||||||||||||||
Sbjct: 1370 ccaaaggaaagaaaaccaaa 1389
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>ref|XM_127961.7| PREDICTED: Mus musculus RIKEN cDNA 4930461P20 gene (4930461P20Rik),
            mRNA
          Length = 2137

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 433  ccaaaggaaagaaaaccaaa 452
            ||||||||||||||||||||
Sbjct: 1610 ccaaaggaaagaaaaccaaa 1629
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>ref|XM_906184.2| PREDICTED: Mus musculus RIKEN cDNA 4930461P20 gene (4930461P20Rik),
            mRNA
          Length = 2139

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 433  ccaaaggaaagaaaaccaaa 452
            ||||||||||||||||||||
Sbjct: 1610 ccaaaggaaagaaaaccaaa 1629
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>gb|AC113244.19| Mus musculus chromosome 19, clone RP23-172E2, complete sequence
          Length = 224351

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     gcaccaaacaggaaaaacag 96
              ||||||||||||||||||||
Sbjct: 136453 gcaccaaacaggaaaaacag 136434
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>emb|CR792425.6| Zebrafish DNA sequence from clone DKEY-81N9 in linkage group 2,
             complete sequence
          Length = 168311

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 467   gaagtttgaaacaagaaaac 486
             ||||||||||||||||||||
Sbjct: 24141 gaagtttgaaacaagaaaac 24160
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>emb|AJ786317.1| Streptomyces fradiae putative neomycin biosynthetic gene cluster,
             strain ATCC 10745
          Length = 42149

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 488   ccgaccgcgcccgcggcggc 507
             ||||||||||||||||||||
Sbjct: 12488 ccgaccgcgcccgcggcggc 12469
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>emb|AJ843080.1| Streptomyces fradiae neomycin biosynthetic gene cluster, strain MCIMB
            8233
          Length = 30837

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 488  ccgaccgcgcccgcggcggc 507
            ||||||||||||||||||||
Sbjct: 8204 ccgaccgcgcccgcggcggc 8223
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>gb|AC093024.7| Homo sapiens 12 BAC RP11-12L19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 32393

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 431   acccaaaggaaagaaaacca 450
             ||||||||||||||||||||
Sbjct: 25867 acccaaaggaaagaaaacca 25848
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>gb|AE014238.1| Streptococcus agalactiae 2603V/R section 48 of 100 of the complete
             genome
          Length = 21317

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 466   ggaagtttgaaacaagaaaa 485
             ||||||||||||||||||||
Sbjct: 18608 ggaagtttgaaacaagaaaa 18589
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>gb|AY831460.1| Pseudomonas putida strain GJ31 nahINLOMKJX gene cluster, complete
            sequence
          Length = 5943

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 126  tgctcgatggcgccggccgt 145
            ||||||||||||||||||||
Sbjct: 2933 tgctcgatggcgccggccgt 2914
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>emb|AL766848.1|SAG766848 Streptococcus agalactiae NEM316 complete genome, segment 6
          Length = 233050

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 466    ggaagtttgaaacaagaaaa 485
              ||||||||||||||||||||
Sbjct: 150281 ggaagtttgaaacaagaaaa 150262
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>gb|AC087113.11| Mus Musculus Strain C57BL6/J Chromosome 15 BAC, RP23-99A15, Complete
             Sequence, complete sequence
          Length = 223882

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 433   ccaaaggaaagaaaaccaaa 452
             ||||||||||||||||||||
Sbjct: 23365 ccaaaggaaagaaaaccaaa 23384
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>gb|AC127020.16| Medicago truncatula clone mth2-9p1, complete sequence
          Length = 127642

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   agttttgggtccaggttcat 186
             ||||||||||||||||||||
Sbjct: 51600 agttttgggtccaggttcat 51619
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>dbj|AB211959.1| Streptomyces fradiae orf6, neoU, neoT, neoS, neoR, neoA, neoB, neoC,
             neoD, neoE, neoF, neoG, neoH, neoI, neoJ, neoK, neoL,
             neoM, neoN, neoO, neoP, neoQ, orf1, orf2, orf3, orf4, orf5
             genes, complete and partial cds
          Length = 39237

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 488   ccgaccgcgcccgcggcggc 507
             ||||||||||||||||||||
Sbjct: 12021 ccgaccgcgcccgcggcggc 12040
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>gb|AF492384.1| Rattus norvegicus putative regulation protein GS3 mRNA, complete
           cds
          Length = 1175

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 433 ccaaaggaaagaaaaccaaa 452
           ||||||||||||||||||||
Sbjct: 619 ccaaaggaaagaaaaccaaa 638
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>gb|AC008842.6| Homo sapiens chromosome 5 clone CTD-2155H8, complete sequence
          Length = 125238

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 181    gttcattgtacctctccttcccac 204
              ||||||| ||||||||||||||||
Sbjct: 105095 gttcattctacctctccttcccac 105118
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>dbj|AK020688.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched
           library, clone:9930116P15 product:hypothetical
           Cytochrome c family heme-binding site/Zinc finger, C2H2
           type containing protein, full insert sequence
          Length = 955

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 433 ccaaaggaaagaaaaccaaa 452
           ||||||||||||||||||||
Sbjct: 430 ccaaaggaaagaaaaccaaa 449
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 382      cagcagtcaccaccacactt 401
                ||||||||||||||||||||
Sbjct: 34351369 cagcagtcaccaccacactt 34351388
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>gb|AC010165.10|AC010165 Homo sapiens chromosome 5 clone RP11-17J3, complete sequence
          Length = 168909

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 181  gttcattgtacctctccttcccac 204
            ||||||| ||||||||||||||||
Sbjct: 7463 gttcattctacctctccttcccac 7440
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 489     cgaccgcgcccgcggcggcg 508
               ||||||||||||||||||||
Sbjct: 3347857 cgaccgcgcccgcggcggcg 3347876
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>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0468B07
          Length = 169071

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 382   cagcagtcaccaccacactt 401
             ||||||||||||||||||||
Sbjct: 33713 cagcagtcaccaccacactt 33732
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>gb|AF246323.1|AF246323 Acidithiobacillus ferroxidans pyruvate kinase gene, partial
           sequence
          Length = 1677

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 229 gcgatgttcatgccggcagt 248
           ||||||||||||||||||||
Sbjct: 703 gcgatgttcatgccggcagt 684
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 492    ccgcgcccgcggcggcggca 511
              ||||||||||||||||||||
Sbjct: 757712 ccgcgcccgcggcggcggca 757731
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 488     ccgaccgcgcccgcggcggc 507
               ||||||||||||||||||||
Sbjct: 3411870 ccgaccgcgcccgcggcggc 3411889
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>gb|BC086587.1| Rattus norvegicus putative regulation protein GS3, mRNA (cDNA clone
           MGC:105321 IMAGE:7309461), complete cds
          Length = 1255

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 433 ccaaaggaaagaaaaccaaa 452
           ||||||||||||||||||||
Sbjct: 696 ccaaaggaaagaaaaccaaa 715
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>emb|AL133247.1|CNS01DUK BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 11B22 of
             library CITB_978_SKB from chromosome 2 of Homo sapiens
             (Human)
          Length = 189316

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 377   ccaggcagcagtcaccacca 396
             ||||||||||||||||||||
Sbjct: 98190 ccaggcagcagtcaccacca 98209
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>emb|CT027588.10| Mouse DNA sequence from clone RP23-461P14 on chromosome 9, complete
             sequence
          Length = 182404

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   gtgccagttttgggtccagg 181
             ||||||||||||||||||||
Sbjct: 75755 gtgccagttttgggtccagg 75774
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 85      caggaaaaacagttcgtcgc 104
               ||||||||||||||||||||
Sbjct: 1375565 caggaaaaacagttcgtcgc 1375584
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>emb|AJ629247.1| Streptomyces fradiae neomycin biosynthesis gene cluster, strain DSM
             40063
          Length = 50466

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 488   ccgaccgcgcccgcggcggc 507
             ||||||||||||||||||||
Sbjct: 16750 ccgaccgcgcccgcggcggc 16769
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>gb|DQ294599.1| Spiromyces aspiralis isolate AFTOL-ID-185 RNA polymerase II largest
            subunit (RPB1) gene, partial cds
          Length = 3067

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 421  ctttaacacgacccaaagga 440
            ||||||||||||||||||||
Sbjct: 1777 ctttaacacgacccaaagga 1796
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>dbj|AB047857.1| Homo sapiens SRD5A2 gene for steroid 5 alpha-reductase type II,
            partial cds
          Length = 6224

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 377  ccaggcagcagtcaccacca 396
            ||||||||||||||||||||
Sbjct: 1096 ccaggcagcagtcaccacca 1077


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,783,027
Number of Sequences: 3902068
Number of extensions: 4783027
Number of successful extensions: 99683
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98558
Number of HSP's gapped (non-prelim): 1125
length of query: 525
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 502
effective length of database: 17,143,297,704
effective search space: 8605935447408
effective search space used: 8605935447408
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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