Clone Name | rbasd25k15 |
---|---|
Clone Library Name | barley_pub |
>gb|AY591012.1| Zea mays cultivar re1 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 524 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 303 cggtgtttccaaatcatcca 284
>gb|AY591011.1| Zea mays cultivar r67 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 526 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 305 cggtgtttccaaatcatcca 286
>gb|AY591010.1| Zea mays cultivar r03 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 527 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 306 cggtgtttccaaatcatcca 287
>gb|AY591009.1| Zea mays cultivar p38 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 527 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 306 cggtgtttccaaatcatcca 287
>gb|AY591008.1| Zea mays cultivar mko alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 527 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 306 cggtgtttccaaatcatcca 287
>gb|AY591007.1| Zea mays cultivar k76 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 527 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 306 cggtgtttccaaatcatcca 287
>gb|AY591006.1| Zea mays cultivar k29 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 528 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 307 cggtgtttccaaatcatcca 288
>gb|AY591005.1| Zea mays cultivar j40 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 527 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 306 cggtgtttccaaatcatcca 287
>gb|AY591004.1| Zea mays cultivar ivana alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 527 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 306 cggtgtttccaaatcatcca 287
>gb|AY591003.1| Zea mays cultivar hb9 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 527 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 306 cggtgtttccaaatcatcca 287
>gb|AY591002.1| Zea mays cultivar H99 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 526 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 305 cggtgtttccaaatcatcca 286
>gb|AY591001.1| Zea mays cultivar H60 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 527 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 306 cggtgtttccaaatcatcca 287
>gb|AY591000.1| Zea mays cultivar g80 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 526 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 305 cggtgtttccaaatcatcca 286
>gb|AY590999.1| Zea mays cultivar g48 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 528 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 307 cggtgtttccaaatcatcca 288
>gb|AY590998.1| Zea mays cultivar g42 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 524 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 303 cggtgtttccaaatcatcca 284
>gb|AY590997.1| Zea mays cultivar g39 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 528 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 307 cggtgtttccaaatcatcca 288
>gb|AY590996.1| Zea mays cultivar co109 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 527 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 306 cggtgtttccaaatcatcca 287
>gb|AY590995.1| Zea mays cultivar b84 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 527 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 306 cggtgtttccaaatcatcca 287
>gb|AY590994.1| Zea mays cultivar B73 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 528 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 307 cggtgtttccaaatcatcca 288
>gb|AY590993.1| Zea mays cultivar 805 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 526 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 305 cggtgtttccaaatcatcca 286
>gb|AY590992.1| Zea mays cultivar 647 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 527 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 306 cggtgtttccaaatcatcca 287
>gb|AY590991.1| Zea mays cultivar 595 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 526 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 305 cggtgtttccaaatcatcca 286
>gb|AY590990.1| Zea mays cultivar 207 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 527 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 306 cggtgtttccaaatcatcca 287
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 ttgtgcagcggctttggcgtgttc 240 |||||||||||||||||| ||||| Sbjct: 373384 ttgtgcagcggctttggcctgttc 373361
>emb|AL390027.11| Human DNA sequence from clone RP11-368G3 on chromosome X Contains an UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1 (B3GNT1) pseudogene, complete sequence Length = 200191 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 atggcctcctacttgatgtt 113 |||||||||||||||||||| Sbjct: 18148 atggcctcctacttgatgtt 18129
>emb|AL157762.13| Human DNA sequence from clone RP11-153I24 on chromosome 13q33.1-34 Contains the LIG4 gene for ligase IV, DNA, ATP-dependent, a novel gene (FLJ14906), the TNFSF13B gene for tumor necrosis factor (ligand) superfamily, member 13b and a CpG island, complete sequence Length = 185229 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aaagcaaaaagagaataact 28 |||||||||||||||||||| Sbjct: 9360 aaagcaaaaagagaataact 9379
>gb|AC107326.4| Drosophila melanogaster X BAC RP98-33A8 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177096 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 caaagcaaaaagagaataac 27 |||||||||||||||||||| Sbjct: 140344 caaagcaaaaagagaataac 140363
>gb|AC091202.3| Drosophila melanogaster 3L BAC RP98-30A3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 171209 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 cctggcctgcagccaccagtccat 266 ||||||||||||||| |||||||| Sbjct: 95704 cctggcctgcagccagcagtccat 95727
>gb|AF479264.1| Homo sapiens ligase IV, DNA, ATP-dependent (LIG4) gene, complete cds Length = 8590 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aaagcaaaaagagaataact 28 |||||||||||||||||||| Sbjct: 4003 aaagcaaaaagagaataact 3984
>gb|AF123535.1| Zea mays alcohol dehydrogenase 1 (adh1) gene, adh1-F allele, complete cds Length = 160480 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 37975 cggtgtttccaaatcatcca 37956
>gb|AE003563.4| Drosophila melanogaster chromosome 3L, section 22 of 83 of the complete sequence Length = 264966 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 cctggcctgcagccaccagtccat 266 ||||||||||||||| |||||||| Sbjct: 208640 cctggcctgcagccagcagtccat 208663
>gb|AE003421.2| Drosophila melanogaster chromosome X, section 5 of 74 of the complete sequence Length = 304204 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 caaagcaaaaagagaataac 27 |||||||||||||||||||| Sbjct: 202654 caaagcaaaaagagaataac 202673
>gb|AY691949.1| Zea mays alcohol dehydrogenase 1 (adh1A) gene, complete cds; Fourf copia_LTR and Huck gypsy_LTR retrotransposons, complete sequence; Opie2 copia_LTR retrotransposon Zeon gypsy_LTR and Opie1 copia_LTR retrotransposons, complete sequence; Ji copia_LTR retrotransposon, complete sequence; and unknown protein (adh1B), cyclin H-1 (adh1C), unknown protein (adh1D), hypothetical protein (adh1E), and unknown protein (adh1F) genes, complete cds Length = 126039 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggtgtttccaaatcatcca 185 |||||||||||||||||||| Sbjct: 15206 cggtgtttccaaatcatcca 15187 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,349,258 Number of Sequences: 3902068 Number of extensions: 2349258 Number of successful extensions: 47000 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 33 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 46936 Number of HSP's gapped (non-prelim): 64 length of query: 289 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 267 effective length of database: 17,147,199,772 effective search space: 4578302339124 effective search space used: 4578302339124 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)