>emb|AL117390.1|SPAC1805 S.pombe chromosome I cosmid c1805
          Length = 36514

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    aaatcattaaaccaaatatt 55
             ||||||||||||||||||||
Sbjct: 32162 aaatcattaaaccaaatatt 32143

>gb|AY967522.1| Schmidtea mediterranea clone HE.3.07A mRNA sequence
          Length = 996

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 30 cacaacaaatcattaaaccaaata 53
          ||||||| ||||||||||||||||
Sbjct: 74 cacaacatatcattaaaccaaata 97

>emb|AL133157.1|SPAC1B2 S.pombe chromosome I cosmid c1B2
          Length = 13599

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 36  aaatcattaaaccaaatatt 55
           ||||||||||||||||||||
Sbjct: 363 aaatcattaaaccaaatatt 344

>gb|AY066996.1| Schmidtea mediterranea clone H.19.8f unknown mRNA sequence
          Length = 707

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 30  cacaacaaatcattaaaccaaata 53
           ||||||| ||||||||||||||||
Sbjct: 84  cacaacatatcattaaaccaaata 107

>ref|XM_946761.1| Theileria annulata strain Ankara hypothetical protein (TA15525)
           partial mRNA
          Length = 2688

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 38  atcattaaaccaaatattc 56
           |||||||||||||||||||
Sbjct: 258 atcattaaaccaaatattc 240

>emb|AJ630363.1| Canis familiaris MHC class II region on chromosome CFA12, partial
              sequence, BAC clones 224p2 and 282j14, containing DLA-DQA1
              gene, DLA-DQB1 gene and DLA-DQB pseudogene
          Length = 180560

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                        
Query: 46     accaaatattcacagngcttaaacaa 71
              ||||||||||||||| | ||||||||
Sbjct: 130986 accaaatattcacagaggttaaacaa 131011

>emb|BX677666.17| Zebrafish DNA sequence from clone DKEY-58B18 in linkage group 2, complete
              sequence
          Length = 198342

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 35     caaatcattaaaccaaata 53
              |||||||||||||||||||
Sbjct: 111107 caaatcattaaaccaaata 111125

>gb|AC095048.3| Homo sapiens BAC clone RP11-239A9 from 4, complete sequence
          Length = 123661

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 80    aaaatactctccattgtaa 98
             |||||||||||||||||||
Sbjct: 72378 aaaatactctccattgtaa 72396

>gb|AC139724.1| Homo sapiens BAC clone RP11-1H20 from 4, complete sequence
          Length = 155873

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 80     aaaatactctccattgtaa 98
              |||||||||||||||||||
Sbjct: 132823 aaaatactctccattgtaa 132841


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 726,289
Number of Sequences: 3902068
Number of extensions: 726289
Number of successful extensions: 44142
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44130
Number of HSP's gapped (non-prelim): 12
length of query: 118
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 97
effective length of database: 17,151,101,840
effective search space: 1663656878480
effective search space used: 1663656878480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)