ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd25j24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK112883.1| Ciona intestinalis cDNA, clone:cixxx00024, full ... 46 0.13
2gb|AC132274.3| Mus musculus BAC clone RP24-341I21 from chromosom... 44 0.50
3gb|AC151756.2| Ornithorhynchus anatinus chromosome UNK clone OAB... 44 0.50
4ref|XM_462064.1| Debaryomyces hansenii CBS767 hypothetical prote... 42 2.0
5gb|AC073095.4| Homo sapiens BAC clone RP11-384A20 from 7, comple... 42 2.0
6emb|AL592504.6| Human DNA sequence from clone RP11-320J16 on chr... 42 2.0
7emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS... 42 2.0
8gb|AC118465.2| Homo sapiens chromosome 5 clone RP11-950K24, comp... 42 2.0
9gb|AC118554.2| Homo sapiens chromosome 1 clone RP11-61E2, comple... 42 2.0
10gb|AC007839.4|AC007839 Drosophila melanogaster, chromosome 2R, r... 42 2.0
11gb|AC107666.13| Mus musculus chromosome 5, clone RP23-111M3, com... 42 2.0
12gb|AE003797.3| Drosophila melanogaster chromosome 2R, section 53... 42 2.0
13emb|CT476806.2| Pan troglodytes chromosome X BAC RP43-032D14, co... 42 2.0
14gb|BC063024.1| Homo sapiens hypothetical protein FLJ14346, mRNA ... 40 7.9
15ref|NM_111083.2| Arabidopsis thaliana unknown protein AT3G02160 ... 40 7.9
16gb|BT020172.1| Arabidopsis thaliana At3g02160 mRNA, complete cds 40 7.9
17gb|AC158958.4| Mus musculus chromosome 1, clone RP23-31E12, comp... 40 7.9
18gb|BT015767.1| Arabidopsis thaliana At3g02160 mRNA, complete cds 40 7.9
19gb|BC014255.2| Homo sapiens hypothetical protein FLJ14346, mRNA ... 40 7.9
20ref|XM_584206.2| PREDICTED: Bos taurus hypothetical LOC507569 (L... 40 7.9
21gb|DQ480415.1| Gorilla gorilla isolate Gorilla2 CMT1A pseudogene... 40 7.9
22gb|DQ480414.1| Gorilla gorilla isolate Gorilla1 CMT1A pseudogene... 40 7.9
23gb|DQ480413.1| Pan troglodytes isolate Chimp_D2 CMT1A pseudogene... 40 7.9
24gb|DQ480412.1| Pan troglodytes isolate Chimp_D1 CMT1A pseudogene... 40 7.9
25gb|DQ480411.1| Pan troglodytes isolate Chimp_P2 CMT1A pseudogene... 40 7.9
26gb|DQ480410.1| Pan troglodytes isolate Chimp_P1 CMT1A pseudogene... 40 7.9
27gb|DQ480389.1| Homo sapiens isolate AUS2_P2 CMT1A pseudogene, co... 40 7.9
28gb|DQ480388.1| Homo sapiens isolate AUS2_P1 CMT1A pseudogene, co... 40 7.9
29gb|DQ480387.1| Homo sapiens isolate ZUL1_P2 CMT1A pseudogene, co... 40 7.9
30gb|DQ480386.1| Homo sapiens isolate ZUL1_P1 CMT1A pseudogene, co... 40 7.9
31gb|DQ480385.1| Homo sapiens isolate AME1_P2 CMT1A pseudogene, co... 40 7.9
32gb|DQ480384.1| Homo sapiens isolate AME1_P1 CMT1A pseudogene, co... 40 7.9
33gb|DQ480383.1| Homo sapiens isolate JAP_P2 CMT1A pseudogene, com... 40 7.9
34gb|DQ480382.1| Homo sapiens isolate JAP_P1 CMT1A pseudogene, com... 40 7.9
35gb|DQ480381.1| Homo sapiens isolate ZUL2_P2 CMT1A pseudogene, co... 40 7.9
36gb|DQ480380.1| Homo sapiens isolate ZUL2_P1 CMT1A pseudogene, co... 40 7.9
37gb|DQ480379.1| Homo sapiens isolate CAU1_P2 CMT1A pseudogene, co... 40 7.9
38gb|DQ480378.1| Homo sapiens isolate CAU1_P1 CMT1A pseudogene, co... 40 7.9
39gb|DQ480377.1| Homo sapiens isolate CAU2_P2 CMT1A pseudogene, co... 40 7.9
40gb|DQ480376.1| Homo sapiens isolate CAU2_P1 CMT1A pseudogene, co... 40 7.9
41gb|DQ480375.1| Homo sapiens isolate AUS1_P2 CMT1A pseudogene, co... 40 7.9
42gb|DQ480374.1| Homo sapiens isolate AUS1_P1 CMT1A pseudogene, co... 40 7.9
43gb|DQ480373.1| Homo sapiens isolate ITA_P2 CMT1A pseudogene, com... 40 7.9
44gb|DQ480372.1| Homo sapiens isolate ITA_P1 CMT1A pseudogene, com... 40 7.9
45gb|DQ480371.1| Homo sapiens isolate AME2_P2 CMT1A pseudogene, co... 40 7.9
46gb|DQ480370.1| Homo sapiens isolate AME2_P1 CMT1A pseudogene, co... 40 7.9
47ref|XM_534764.2| PREDICTED: Canis familiaris hypothetical LOC477... 40 7.9
48gb|AC011664.10|ATAC011664 Arabidopsis thaliana chromosome III BA... 40 7.9
49gb|AC009755.7|ATAC009755 Arabidopsis thaliana chromosome III BAC... 40 7.9
50emb|CR388124.15| Zebrafish DNA sequence from clone CH211-72C8 in... 40 7.9
51gb|AC124413.2| Mus musculus BAC clone RP24-280K5 from chromosome... 40 7.9
52gb|AC108945.4| Mus musculus BAC clone RP23-119J11 from 15, compl... 40 7.9
53gb|AC121586.3| Mus musculus BAC clone RP23-273A13 from 2, comple... 40 7.9
54gb|AC115755.8| Mus musculus chromosome 15, clone RP23-47L17, com... 40 7.9
55gb|BC104650.1| Homo sapiens hypothetical protein FLJ14346, mRNA ... 40 7.9
56emb|AL663120.1| Human DNA sequence from clone RP11-421P17 on chr... 40 7.9
57emb|AL591506.24| Human DNA sequence from clone RP11-112N13 on ch... 40 7.9
58emb|AL391704.8| Human DNA sequence from clone RP11-94M14 on chro... 40 7.9
59emb|AL121601.13|HSDJ315G1 Human DNA sequence from clone RP1-315G... 40 7.9
60gb|CP000087.1| Rickettsia bellii RML369-C, complete genome 40 7.9
61gb|AC163678.3| Mus musculus BAC clone RP24-104D14 from chromosom... 40 7.9
62gb|BC066296.1| Homo sapiens hypothetical protein FLJ14346, mRNA ... 40 7.9
63emb|AL645846.12| Mouse DNA sequence from clone RP23-244C22 on ch... 40 7.9
64emb|BX294445.10| Zebrafish DNA sequence from clone DKEY-265K11 i... 40 7.9
65emb|CR857626.1| Pongo pygmaeus mRNA; cDNA DKFZp459P0230 (from cl... 40 7.9
66gb|AC183294.3| Pan troglodytes BAC clone CH251-545A24 from chrom... 40 7.9
67gb|AC091959.3| Homo sapiens chromosome 5 clone RP11-449H3, compl... 40 7.9
68gb|AC010051.9| Drosophila melanogaster 3L BAC RP98-3J2 (Roswell ... 40 7.9
69emb|CR624733.1| full-length cDNA clone CS0DM003YM21 of Fetal liv... 40 7.9
70emb|CR623609.1| full-length cDNA clone CS0DJ007YF19 of T cells (... 40 7.9
71gb|AC113266.24| Papio anubis clone rp41-106a4, complete sequence 40 7.9
72dbj|AK090531.1| Homo sapiens cDNA FLJ33212 fis, clone ADRGL2009533 40 7.9
73gb|AC018989.15| Homo sapiens chromosome 17, clone RP11-273K13, c... 40 7.9
74gb|AC027670.6| Homo sapiens chromosome 10 clone RP11-176H12, com... 40 7.9
75gb|AC005838.2| Homo sapiens chromosome 17, clone RP11-385D13, co... 40 7.9
76ref|XM_943046.1| PREDICTED: Homo sapiens similar to hypothetical... 40 7.9
77ref|XM_943043.1| PREDICTED: Homo sapiens similar to hypothetical... 40 7.9
78ref|XM_943038.1| PREDICTED: Homo sapiens similar to hypothetical... 40 7.9
79ref|XM_936866.1| PREDICTED: Homo sapiens similar to hypothetical... 40 7.9
80ref|XM_929797.1| PREDICTED: Homo sapiens similar to hypothetical... 40 7.9
81gb|AC010859.5| Homo sapiens chromosome , clone RP11-3D19, comple... 40 7.9
82gb|AC018926.10|AC018926 Homo sapiens chromosome 15 clone RP11-13... 40 7.9
83emb|BX248130.8| Zebrafish DNA sequence from clone CH211-236E5 in... 40 7.9
84emb|BX823224.1|CNS0A5B4 Arabidopsis thaliana Full-length cDNA Co... 40 7.9
85ref|NM_025029.2| Homo sapiens hypothetical protein FLJ14346 (FLJ... 40 7.9
86gb|AC018804.9| Homo sapiens BAC clone RP11-397H17 from 2, comple... 40 7.9
87gb|AC073869.5| Homo sapiens BAC clone RP11-109E12 from 2, comple... 40 7.9
88gb|AC091887.3| Homo sapiens chromosome 5 clone RP11-118M9, compl... 40 7.9
89gb|AF250324.1|AF250324 Homo sapiens chromosome 4q35 BAC clones R... 40 7.9
90gb|AC159218.3| Pan troglodytes BAC clone CH251-59O2 from chromos... 40 7.9
91gb|BC018206.1| Homo sapiens hypothetical protein FLJ14346, mRNA ... 40 7.9
92gb|AF006043.1|AF006043 Homo sapiens 3-phosphoglycerate dehydroge... 40 7.9
93emb|BX276109.11| Mouse DNA sequence from clone RP23-209P8 on chr... 40 7.9
94emb|BX294670.6| Zebrafish DNA sequence from clone CH211-154O6 in... 40 7.9
95gb|AC007429.11|AC007429 Homo sapiens, clone hRPK.70_A_1, complet... 40 7.9
96gb|AE003593.2| Drosophila melanogaster chromosome 3L, section 74... 40 7.9
97dbj|AP006278.1| Homo sapiens genomic DNA, chromosome 8q22.1, clo... 40 7.9
98dbj|AP005791.2| Homo sapiens genomic DNA, chromosome 8q22, clone... 40 7.9
99gb|U71218.1|HSU71218 Human clone c74F4, 24Kb proximal CMT1A-REP ... 40 7.9
100gb|AC140264.2| Mus musculus BAC clone RP23-316F10 from 10, compl... 40 7.9
101gb|AC101951.11| Mus musculus chromosome 1, clone RP24-153P16, co... 40 7.9
102dbj|AB067619.1| Dimidiochromis compressiceps DNA, SINE sequence,... 40 7.9
103dbj|AB037839.1| Homo sapiens mRNA for KIAA1418 protein, partial cds 40 7.9 
>dbj|AK112883.1| Ciona intestinalis cDNA, clone:cixxx00024, full insert sequence
          Length = 1069

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 424 agtaaaatattgcacaaagggat 446
           |||||||||||||||||||||||
Sbjct: 977 agtaaaatattgcacaaagggat 955
to top
>gb|AC132274.3| Mus musculus BAC clone RP24-341I21 from chromosome 3, complete sequence
          Length = 172883

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 409    gaatatcaaggaaatagtaaaatatt 434
              ||||||||||| ||||||||||||||
Sbjct: 122343 gaatatcaaggtaatagtaaaatatt 122368
to top
>gb|AC151756.2| Ornithorhynchus anatinus chromosome UNK clone OABb-466P24, complete
              sequence
          Length = 156508

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 132    agcaagatgaaccattttcttt 153
              ||||||||||||||||||||||
Sbjct: 113808 agcaagatgaaccattttcttt 113829



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 170    agcaagatgaaccattttctt 190
              |||||||||||||||||||||
Sbjct: 113808 agcaagatgaaccattttctt 113828
to top
>ref|XM_462064.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G13013g)
           partial mRNA
          Length = 216

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 410 aatatcaaggaaatagtaaaa 430
           |||||||||||||||||||||
Sbjct: 34  aatatcaaggaaatagtaaaa 54
to top
>gb|AC073095.4| Homo sapiens BAC clone RP11-384A20 from 7, complete sequence
          Length = 70276

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 238   taaaaatgagatgcaactaaa 258
             |||||||||||||||||||||
Sbjct: 59083 taaaaatgagatgcaactaaa 59063
to top
>emb|AL592504.6| Human DNA sequence from clone RP11-320J16 on chromosome X Contains part
              of a novel gene, complete sequence
          Length = 173828

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 228    aaatgtaatgtaaaaatgagatgca 252
              ||||||||| |||||||||||||||
Sbjct: 120769 aaatgtaatttaaaaatgagatgca 120793
to top
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces
              hansenii
          Length = 2051428

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 410    aatatcaaggaaatagtaaaa 430
              |||||||||||||||||||||
Sbjct: 998111 aatatcaaggaaatagtaaaa 998131
to top
>gb|AC118465.2| Homo sapiens chromosome 5 clone RP11-950K24, complete sequence
          Length = 153176

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 284   aatttaaaaacaaaattagcacatg 308
             |||||||||||||||||| ||||||
Sbjct: 54993 aatttaaaaacaaaattaccacatg 55017
to top
>gb|AC118554.2| Homo sapiens chromosome 1 clone RP11-61E2, complete sequence
          Length = 34319

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 284  aatttaaaaacaaaattagca 304
            |||||||||||||||||||||
Sbjct: 6589 aatttaaaaacaaaattagca 6569
to top
>gb|AC007839.4|AC007839 Drosophila melanogaster, chromosome 2R, region 56B1-56C4, BAC clone
             BACR01N09, complete sequence
          Length = 161172

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 307   tgtgtgcgcccatcaaaagca 327
             |||||||||||||||||||||
Sbjct: 22068 tgtgtgcgcccatcaaaagca 22088
to top
>gb|AC107666.13| Mus musculus chromosome 5, clone RP23-111M3, complete sequence
          Length = 230189

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 472    acaagttcactcttccagatg 492
              |||||||||||||||||||||
Sbjct: 124306 acaagttcactcttccagatg 124326
to top
>gb|AE003797.3| Drosophila melanogaster chromosome 2R, section 53 of 73 of the complete
              sequence
          Length = 306854

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 307    tgtgtgcgcccatcaaaagca 327
              |||||||||||||||||||||
Sbjct: 204904 tgtgtgcgcccatcaaaagca 204924
to top
>emb|CT476806.2| Pan troglodytes chromosome X BAC RP43-032D14, complete sequence
          Length = 145919

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 228   aaatgtaatgtaaaaatgagatgca 252
             ||||||||| |||||||||||||||
Sbjct: 63008 aaatgtaatttaaaaatgagatgca 62984
to top
>gb|BC063024.1| Homo sapiens hypothetical protein FLJ14346, mRNA (cDNA clone
           IMAGE:6094029), partial cds
          Length = 577

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 482 tcttccagatgctcaagtcc 501
           ||||||||||||||||||||
Sbjct: 213 tcttccagatgctcaagtcc 232
to top
>ref|NM_111083.2| Arabidopsis thaliana unknown protein AT3G02160 mRNA, complete cds
          Length = 1700

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 135  aagatgaaccattttcttta 154
            ||||||||||||||||||||
Sbjct: 1018 aagatgaaccattttcttta 999
to top
>gb|BT020172.1| Arabidopsis thaliana At3g02160 mRNA, complete cds
          Length = 1194

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 135 aagatgaaccattttcttta 154
           ||||||||||||||||||||
Sbjct: 688 aagatgaaccattttcttta 669
to top
>gb|AC158958.4| Mus musculus chromosome 1, clone RP23-31E12, complete sequence
          Length = 213244

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 279   taatcaatttaaaaacaaaa 298
             ||||||||||||||||||||
Sbjct: 31872 taatcaatttaaaaacaaaa 31853
to top
>gb|BT015767.1| Arabidopsis thaliana At3g02160 mRNA, complete cds
          Length = 1673

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 135  aagatgaaccattttcttta 154
            ||||||||||||||||||||
Sbjct: 1000 aagatgaaccattttcttta 981
to top
>gb|BC014255.2| Homo sapiens hypothetical protein FLJ14346, mRNA (cDNA clone
           IMAGE:4634703), partial cds
          Length = 609

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 482 tcttccagatgctcaagtcc 501
           ||||||||||||||||||||
Sbjct: 212 tcttccagatgctcaagtcc 231
to top
>ref|XM_584206.2| PREDICTED: Bos taurus hypothetical LOC507569 (LOC507569), mRNA
          Length = 876

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 482 tcttccagatgctcaagtcc 501
           ||||||||||||||||||||
Sbjct: 410 tcttccagatgctcaagtcc 429
to top
>gb|DQ480415.1| Gorilla gorilla isolate Gorilla2 CMT1A pseudogene, complete sequence
          Length = 23823

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21659 aatttaaaaacaaaattagc 21678
to top
>gb|DQ480414.1| Gorilla gorilla isolate Gorilla1 CMT1A pseudogene, complete sequence
          Length = 23823

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21659 aatttaaaaacaaaattagc 21678
to top
>gb|DQ480413.1| Pan troglodytes isolate Chimp_D2 CMT1A pseudogene, complete sequence
          Length = 25916

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 23756 aatttaaaaacaaaattagc 23775
to top
>gb|DQ480412.1| Pan troglodytes isolate Chimp_D1 CMT1A pseudogene, complete sequence
          Length = 25905

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 23745 aatttaaaaacaaaattagc 23764
to top
>gb|DQ480411.1| Pan troglodytes isolate Chimp_P2 CMT1A pseudogene, complete sequence
          Length = 23827

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21657 aatttaaaaacaaaattagc 21676
to top
>gb|DQ480410.1| Pan troglodytes isolate Chimp_P1 CMT1A pseudogene, complete sequence
          Length = 23848

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21676 aatttaaaaacaaaattagc 21695
to top
>gb|DQ480389.1| Homo sapiens isolate AUS2_P2 CMT1A pseudogene, complete sequence
          Length = 23810

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21649 aatttaaaaacaaaattagc 21668
to top
>gb|DQ480388.1| Homo sapiens isolate AUS2_P1 CMT1A pseudogene, complete sequence
          Length = 23812

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21651 aatttaaaaacaaaattagc 21670
to top
>gb|DQ480387.1| Homo sapiens isolate ZUL1_P2 CMT1A pseudogene, complete sequence
          Length = 23808

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21646 aatttaaaaacaaaattagc 21665
to top
>gb|DQ480386.1| Homo sapiens isolate ZUL1_P1 CMT1A pseudogene, complete sequence
          Length = 23804

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21642 aatttaaaaacaaaattagc 21661
to top
>gb|DQ480385.1| Homo sapiens isolate AME1_P2 CMT1A pseudogene, complete sequence
          Length = 23810

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21651 aatttaaaaacaaaattagc 21670
to top
>gb|DQ480384.1| Homo sapiens isolate AME1_P1 CMT1A pseudogene, complete sequence
          Length = 23808

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21649 aatttaaaaacaaaattagc 21668
to top
>gb|DQ480383.1| Homo sapiens isolate JAP_P2 CMT1A pseudogene, complete sequence
          Length = 23809

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21652 aatttaaaaacaaaattagc 21671
to top
>gb|DQ480382.1| Homo sapiens isolate JAP_P1 CMT1A pseudogene, complete sequence
          Length = 23810

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21650 aatttaaaaacaaaattagc 21669
to top
>gb|DQ480381.1| Homo sapiens isolate ZUL2_P2 CMT1A pseudogene, complete sequence
          Length = 23805

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21647 aatttaaaaacaaaattagc 21666
to top
>gb|DQ480380.1| Homo sapiens isolate ZUL2_P1 CMT1A pseudogene, complete sequence
          Length = 23804

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21648 aatttaaaaacaaaattagc 21667
to top
>gb|DQ480379.1| Homo sapiens isolate CAU1_P2 CMT1A pseudogene, complete sequence
          Length = 23809

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21645 aatttaaaaacaaaattagc 21664
to top
>gb|DQ480378.1| Homo sapiens isolate CAU1_P1 CMT1A pseudogene, complete sequence
          Length = 23800

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21641 aatttaaaaacaaaattagc 21660
to top
>gb|DQ480377.1| Homo sapiens isolate CAU2_P2 CMT1A pseudogene, complete sequence
          Length = 23807

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21647 aatttaaaaacaaaattagc 21666
to top
>gb|DQ480376.1| Homo sapiens isolate CAU2_P1 CMT1A pseudogene, complete sequence
          Length = 23804

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21644 aatttaaaaacaaaattagc 21663
to top
>gb|DQ480375.1| Homo sapiens isolate AUS1_P2 CMT1A pseudogene, complete sequence
          Length = 23810

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21649 aatttaaaaacaaaattagc 21668
to top
>gb|DQ480374.1| Homo sapiens isolate AUS1_P1 CMT1A pseudogene, complete sequence
          Length = 23810

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21649 aatttaaaaacaaaattagc 21668
to top
>gb|DQ480373.1| Homo sapiens isolate ITA_P2 CMT1A pseudogene, complete sequence
          Length = 23804

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21644 aatttaaaaacaaaattagc 21663
to top
>gb|DQ480372.1| Homo sapiens isolate ITA_P1 CMT1A pseudogene, complete sequence
          Length = 23810

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21645 aatttaaaaacaaaattagc 21664
to top
>gb|DQ480371.1| Homo sapiens isolate AME2_P2 CMT1A pseudogene, complete sequence
          Length = 23808

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21646 aatttaaaaacaaaattagc 21665
to top
>gb|DQ480370.1| Homo sapiens isolate AME2_P1 CMT1A pseudogene, complete sequence
          Length = 23806

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21644 aatttaaaaacaaaattagc 21663
to top
>ref|XM_534764.2| PREDICTED: Canis familiaris hypothetical LOC477569 (LOC477569),
           mRNA
          Length = 913

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 482 tcttccagatgctcaagtcc 501
           ||||||||||||||||||||
Sbjct: 241 tcttccagatgctcaagtcc 260
to top
>gb|AC011664.10|ATAC011664 Arabidopsis thaliana chromosome III BAC F1C9 genomic sequence, complete
             sequence
          Length = 103960

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   aagatgaaccattttcttta 154
             ||||||||||||||||||||
Sbjct: 14035 aagatgaaccattttcttta 14054
to top
>gb|AC009755.7|ATAC009755 Arabidopsis thaliana chromosome III BAC F14P3 genomic sequence,
             complete sequence
          Length = 94369

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   aagatgaaccattttcttta 154
             ||||||||||||||||||||
Sbjct: 79579 aagatgaaccattttcttta 79598
to top
>emb|CR388124.15| Zebrafish DNA sequence from clone CH211-72C8 in linkage group 15,
             complete sequence
          Length = 173535

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 275   aatgtaatcaatttaaaaacaaaa 298
             |||||||||||||||||| |||||
Sbjct: 66850 aatgtaatcaatttaaaagcaaaa 66873
to top
>gb|AC124413.2| Mus musculus BAC clone RP24-280K5 from chromosome 10, complete sequence
          Length = 178858

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 280   aatcaatttaaaaacaaaat 299
             ||||||||||||||||||||
Sbjct: 33260 aatcaatttaaaaacaaaat 33279
to top
>gb|AC108945.4| Mus musculus BAC clone RP23-119J11 from 15, complete sequence
          Length = 200294

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 279    taatcaatttaaaaacaaaa 298
              ||||||||||||||||||||
Sbjct: 136968 taatcaatttaaaaacaaaa 136949
to top
>gb|AC121586.3| Mus musculus BAC clone RP23-273A13 from 2, complete sequence
          Length = 154614

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   ctactaaatgtaatgtaaaa 242
             ||||||||||||||||||||
Sbjct: 67203 ctactaaatgtaatgtaaaa 67222
to top
>gb|AC115755.8| Mus musculus chromosome 15, clone RP23-47L17, complete sequence
          Length = 123355

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   atgtaatcaatttaaaaaca 295
             ||||||||||||||||||||
Sbjct: 85220 atgtaatcaatttaaaaaca 85239
to top
>gb|BC104650.1| Homo sapiens hypothetical protein FLJ14346, mRNA (cDNA clone
           IMAGE:6733400), partial cds
          Length = 490

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 482 tcttccagatgctcaagtcc 501
           ||||||||||||||||||||
Sbjct: 111 tcttccagatgctcaagtcc 130
to top
>emb|AL663120.1| Human DNA sequence from clone RP11-421P17 on chromosome 1, complete
             sequence
          Length = 18025

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 452   aatacatatcatgtttgtaa 471
             ||||||||||||||||||||
Sbjct: 14693 aatacatatcatgtttgtaa 14712
to top
>emb|AL591506.24| Human DNA sequence from clone RP11-112N13 on chromosome 9 Contains a
              pseudogene similar to reverse transcriptase proteins,
              complete sequence
          Length = 175831

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 284    aatttaaaaacaaaattagc 303
              ||||||||||||||||||||
Sbjct: 149556 aatttaaaaacaaaattagc 149537
to top
>emb|AL391704.8| Human DNA sequence from clone RP11-94M14 on chromosome 10 Contains the 5'
              end of a novel gene and two novel genes, complete sequence
          Length = 180552

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 280    aatcaatttaaaaacaaaat 299
              ||||||||||||||||||||
Sbjct: 156744 aatcaatttaaaaacaaaat 156725
to top
>emb|AL121601.13|HSDJ315G1 Human DNA sequence from clone RP1-315G1 on chromosome Xq24-25 Contains
             the 3' end of the BIRC4 gene for baculoviral IAP
             repeat-containing 4, two novel genes, a par-6 partitioning
             defective 6 homolog beta (C. elegans) (PARD6B) pseudogene,
              the 5' end of the STAG2 gene for stromal antigen 2 and a
             CpG island, complete sequence
          Length = 133391

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 78278 aatttaaaaacaaaattagc 78297
to top
>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome
          Length = 1522076

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 415     caaggaaatagtaaaatatt 434
               ||||||||||||||||||||
Sbjct: 1095000 caaggaaatagtaaaatatt 1094981
to top
>gb|AC163678.3| Mus musculus BAC clone RP24-104D14 from chromosome 10, complete sequence
          Length = 196603

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     agagatttctatttataaat 56
              ||||||||||||||||||||
Sbjct: 149824 agagatttctatttataaat 149805
to top
>gb|BC066296.1| Homo sapiens hypothetical protein FLJ14346, mRNA (cDNA clone
           MGC:87017 IMAGE:5284352), complete cds
          Length = 666

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 482 tcttccagatgctcaagtcc 501
           ||||||||||||||||||||
Sbjct: 302 tcttccagatgctcaagtcc 321
to top
>emb|AL645846.12| Mouse DNA sequence from clone RP23-244C22 on chromosome 11 Contains a
              novel gene, the Tob1 gene for transducer of ErbB-2.1, the
              gene for a novel protein (AY100450) (WFIKKN-like growth and
              differentiation factor-associated serum protein 1) (Gasp1),
              a novel gene, the gene for a novel protein (3300001P08Rik)
              (Luc7a) and one CpG island, complete sequence
          Length = 188962

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 275    aatgtaatcaatttaaaaacaaaa 298
              ||||||| ||||||||||||||||
Sbjct: 135195 aatgtaaacaatttaaaaacaaaa 135172
to top
>emb|BX294445.10| Zebrafish DNA sequence from clone DKEY-265K11 in linkage group 1,
              complete sequence
          Length = 159780

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 282    tcaatttaaaaacaaaatta 301
              ||||||||||||||||||||
Sbjct: 132343 tcaatttaaaaacaaaatta 132324
to top
>emb|CR857626.1| Pongo pygmaeus mRNA; cDNA DKFZp459P0230 (from clone DKFZp459P0230)
          Length = 2807

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 482 tcttccagatgctcaagtcc 501
           ||||||||||||||||||||
Sbjct: 215 tcttccagatgctcaagtcc 234
to top
>gb|AC183294.3| Pan troglodytes BAC clone CH251-545A24 from chromosome 17, complete
              sequence
          Length = 173991

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 284    aatttaaaaacaaaattagc 303
              ||||||||||||||||||||
Sbjct: 135421 aatttaaaaacaaaattagc 135440
to top
>gb|AC091959.3| Homo sapiens chromosome 5 clone RP11-449H3, complete sequence
          Length = 155839

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 558    aaacaacagtataaaaaaga 577
              ||||||||||||||||||||
Sbjct: 110541 aaacaacagtataaaaaaga 110522
to top
>gb|AC010051.9| Drosophila melanogaster 3L BAC RP98-3J2 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 184424

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   ctaaatgtaatgtaaaaatg 245
             ||||||||||||||||||||
Sbjct: 63994 ctaaatgtaatgtaaaaatg 63975
to top
>emb|CR624733.1| full-length cDNA clone CS0DM003YM21 of Fetal liver of Homo sapiens
           (human)
          Length = 595

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 482 tcttccagatgctcaagtcc 501
           ||||||||||||||||||||
Sbjct: 232 tcttccagatgctcaagtcc 251
to top
>emb|CR623609.1| full-length cDNA clone CS0DJ007YF19 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 901

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 482 tcttccagatgctcaagtcc 501
           ||||||||||||||||||||
Sbjct: 570 tcttccagatgctcaagtcc 589
to top
>gb|AC113266.24| Papio anubis clone rp41-106a4, complete sequence
          Length = 193032

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 482   tcttccagatgctcaagtcc 501
             ||||||||||||||||||||
Sbjct: 42368 tcttccagatgctcaagtcc 42349
to top
>dbj|AK090531.1| Homo sapiens cDNA FLJ33212 fis, clone ADRGL2009533
          Length = 2544

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 482 tcttccagatgctcaagtcc 501
           ||||||||||||||||||||
Sbjct: 114 tcttccagatgctcaagtcc 133
to top
>gb|AC018989.15| Homo sapiens chromosome 17, clone RP11-273K13, complete sequence
          Length = 162066

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 15536 aatttaaaaacaaaattagc 15517
to top
>gb|AC027670.6| Homo sapiens chromosome 10 clone RP11-176H12, complete sequence
          Length = 191805

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 401    gtgtcattgaatatcaaggaaata 424
              |||||| |||||||||||||||||
Sbjct: 126809 gtgtcaatgaatatcaaggaaata 126832
to top
>gb|AC005838.2| Homo sapiens chromosome 17, clone RP11-385D13, complete sequence
          Length = 67791

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 21741 aatttaaaaacaaaattagc 21760
to top
>ref|XM_943046.1| PREDICTED: Homo sapiens similar to hypothetical protein FLJ14346,
           transcript variant 4 (LOC653904), mRNA
          Length = 791

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 482 tcttccagatgctcaagtcc 501
           ||||||||||||||||||||
Sbjct: 555 tcttccagatgctcaagtcc 574
to top
>ref|XM_943043.1| PREDICTED: Homo sapiens similar to hypothetical protein FLJ14346,
           transcript variant 3 (LOC653904), mRNA
          Length = 3161

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 482 tcttccagatgctcaagtcc 501
           ||||||||||||||||||||
Sbjct: 737 tcttccagatgctcaagtcc 756
to top
>ref|XM_943038.1| PREDICTED: Homo sapiens similar to hypothetical protein FLJ14346,
           transcript variant 2 (LOC653904), mRNA
          Length = 608

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 482 tcttccagatgctcaagtcc 501
           ||||||||||||||||||||
Sbjct: 372 tcttccagatgctcaagtcc 391
to top
>ref|XM_936866.1| PREDICTED: Homo sapiens similar to hypothetical protein FLJ14346,
           transcript variant 1 (LOC653904), mRNA
          Length = 1053

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 482 tcttccagatgctcaagtcc 501
           ||||||||||||||||||||
Sbjct: 555 tcttccagatgctcaagtcc 574
to top
>ref|XM_929797.1| PREDICTED: Homo sapiens similar to hypothetical protein FLJ14346
           (LOC653784), mRNA
          Length = 738

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 482 tcttccagatgctcaagtcc 501
           ||||||||||||||||||||
Sbjct: 379 tcttccagatgctcaagtcc 398
to top
>gb|AC010859.5| Homo sapiens chromosome , clone RP11-3D19, complete sequence
          Length = 171301

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 281   atcaatttaaaaacaaaatt 300
             ||||||||||||||||||||
Sbjct: 57033 atcaatttaaaaacaaaatt 57052
to top
>gb|AC018926.10|AC018926 Homo sapiens chromosome 15 clone RP11-139H15 map 15q21.3, complete
             sequence
          Length = 158033

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 477   ttcactcttccagatgctca 496
             ||||||||||||||||||||
Sbjct: 59348 ttcactcttccagatgctca 59329
to top
>emb|BX248130.8| Zebrafish DNA sequence from clone CH211-236E5 in linkage group 1,
              complete sequence
          Length = 183058

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 282    tcaatttaaaaacaaaatta 301
              ||||||||||||||||||||
Sbjct: 178092 tcaatttaaaaacaaaatta 178073
to top
>emb|BX823224.1|CNS0A5B4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS12ZG05 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1702

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 135  aagatgaaccattttcttta 154
            ||||||||||||||||||||
Sbjct: 1018 aagatgaaccattttcttta 999
to top
>ref|NM_025029.2| Homo sapiens hypothetical protein FLJ14346 (FLJ14346), mRNA
          Length = 765

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 482 tcttccagatgctcaagtcc 501
           ||||||||||||||||||||
Sbjct: 368 tcttccagatgctcaagtcc 387
to top
>gb|AC018804.9| Homo sapiens BAC clone RP11-397H17 from 2, complete sequence
          Length = 195514

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 482   tcttccagatgctcaagtcc 501
             ||||||||||||||||||||
Sbjct: 55757 tcttccagatgctcaagtcc 55738
to top
>gb|AC073869.5| Homo sapiens BAC clone RP11-109E12 from 2, complete sequence
          Length = 195280

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 482    tcttccagatgctcaagtcc 501
              ||||||||||||||||||||
Sbjct: 166247 tcttccagatgctcaagtcc 166228
to top
>gb|AC091887.3| Homo sapiens chromosome 5 clone RP11-118M9, complete sequence
          Length = 171095

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 558    aaacaacagtataaaaaaga 577
              ||||||||||||||||||||
Sbjct: 156991 aaacaacagtataaaaaaga 157010
to top
>gb|AF250324.1|AF250324 Homo sapiens chromosome 4q35 BAC clones RPCI-11-463J17 and
              RPCI-6-92G13RCB2, complete sequence
          Length = 245708

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 281    atcaatttaaaaacaaaatt 300
              ||||||||||||||||||||
Sbjct: 195021 atcaatttaaaaacaaaatt 195040
to top
>gb|AC159218.3| Pan troglodytes BAC clone CH251-59O2 from chromosome unknown, complete
             sequence
          Length = 178970

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 83980 aatttaaaaacaaaattagc 83999
to top
>gb|BC018206.1| Homo sapiens hypothetical protein FLJ14346, mRNA (cDNA clone
           MGC:8772 IMAGE:3862861), complete cds
          Length = 600

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 482 tcttccagatgctcaagtcc 501
           ||||||||||||||||||||
Sbjct: 234 tcttccagatgctcaagtcc 253
to top
>gb|AF006043.1|AF006043 Homo sapiens 3-phosphoglycerate dehydrogenase mRNA, complete cds
          Length = 2478

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 482 tcttccagatgctcaagtcc 501
           ||||||||||||||||||||
Sbjct: 238 tcttccagatgctcaagtcc 257
to top
>emb|BX276109.11| Mouse DNA sequence from clone RP23-209P8 on chromosome 2, complete
             sequence
          Length = 69864

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   ctactaaatgtaatgtaaaa 242
             ||||||||||||||||||||
Sbjct: 29532 ctactaaatgtaatgtaaaa 29513
to top
>emb|BX294670.6| Zebrafish DNA sequence from clone CH211-154O6 in linkage group 16,
             complete sequence
          Length = 199070

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 227   taaatgtaatgtaaaaatga 246
             ||||||||||||||||||||
Sbjct: 51802 taaatgtaatgtaaaaatga 51783
to top
>gb|AC007429.11|AC007429 Homo sapiens, clone hRPK.70_A_1, complete sequence
          Length = 160025

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 279    taatcaatttaaaaacaaaattag 302
              ||||||| ||||||||||||||||
Sbjct: 144748 taatcaagttaaaaacaaaattag 144725
to top
>gb|AE003593.2| Drosophila melanogaster chromosome 3L, section 74 of 83 of the complete
             sequence
          Length = 313157

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   ctaaatgtaatgtaaaaatg 245
             ||||||||||||||||||||
Sbjct: 84687 ctaaatgtaatgtaaaaatg 84706
to top
>dbj|AP006278.1| Homo sapiens genomic DNA, chromosome 8q22.1, clone: KB1573B4, complete
             sequence
          Length = 157927

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 281   atcaatttaaaaacaaaatt 300
             ||||||||||||||||||||
Sbjct: 13362 atcaatttaaaaacaaaatt 13381
to top
>dbj|AP005791.2| Homo sapiens genomic DNA, chromosome 8q22, clone: KB1357H4, complete
              sequence
          Length = 160208

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 281    atcaatttaaaaacaaaatt 300
              ||||||||||||||||||||
Sbjct: 156797 atcaatttaaaaacaaaatt 156816
to top
>gb|U71218.1|HSU71218 Human clone c74F4, 24Kb proximal CMT1A-REP sequence
          Length = 34240

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aatttaaaaacaaaattagc 303
             ||||||||||||||||||||
Sbjct: 30249 aatttaaaaacaaaattagc 30268
to top
>gb|AC140264.2| Mus musculus BAC clone RP23-316F10 from 10, complete sequence
          Length = 176292

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 280   aatcaatttaaaaacaaaat 299
             ||||||||||||||||||||
Sbjct: 35916 aatcaatttaaaaacaaaat 35897
to top
>gb|AC101951.11| Mus musculus chromosome 1, clone RP24-153P16, complete sequence
          Length = 174693

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 279    taatcaatttaaaaacaaaa 298
              ||||||||||||||||||||
Sbjct: 153762 taatcaatttaaaaacaaaa 153743
to top
>dbj|AB067619.1| Dimidiochromis compressiceps DNA, SINE sequence, locus:1269
          Length = 624

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 280 aatcaatttaaaaacaaaat 299
           ||||||||||||||||||||
Sbjct: 526 aatcaatttaaaaacaaaat 545
to top
>dbj|AB037839.1| Homo sapiens mRNA for KIAA1418 protein, partial cds
          Length = 4896

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 482 tcttccagatgctcaagtcc 501
           ||||||||||||||||||||
Sbjct: 80  tcttccagatgctcaagtcc 61


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,560,849
Number of Sequences: 3902068
Number of extensions: 7560849
Number of successful extensions: 175387
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 175145
Number of HSP's gapped (non-prelim): 242
length of query: 579
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 556
effective length of database: 17,143,297,704
effective search space: 9531673523424
effective search space used: 9531673523424
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top