ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd25j17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK064987.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 4e-66
2dbj|AK121431.1| Oryza sativa (japonica cultivar-group) cDNA clon... 252 1e-63
3gb|AF007794.1|AF007794 Zea mays retinoblastoma-related protein 2... 220 4e-54
4gb|AF007795.1|AF007795 Zea mays retinoblastoma-related protein 2... 182 8e-43
5gb|BT016548.1| Zea mays clone Contig381 mRNA sequence 167 5e-38
6emb|X98923.1|ZMRB1 Z.mays mRNA for Rb1 protein 167 5e-38
7gb|U52099.2|ZMU52099 Zea mays retinoblastoma-like protein (ZmRB)... 167 5e-38
8gb|AF250050.1| Zea mays retinoblastoma related protein RBR1 (rbr... 167 5e-38
9gb|AF007793.1|AF007793 Zea mays retinoblastoma-related protein 1... 167 5e-38
10emb|AJ279062.2|ZMA279062 Zea mays rbr2 gene for retinoblastoma-r... 113 6e-22
11gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome... 111 2e-21
12dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
13gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 111 2e-21
14gb|AY117036.1| Cocos nucifera retinoblastoma-like protein (Rb1) ... 96 1e-16
15gb|AY109777.1| Zea mays CL1187_-3 mRNA sequence 96 1e-16
16gb|AY109345.1| Zea mays CL1187_1 mRNA sequence 72 2e-09
17dbj|AB015221.1| Nicotiana tabacum NtRb1 mRNA, complete cds 48 0.030
18gb|AY699399.1| Nicotiana benthamiana retinoblastoma protein mRNA... 48 0.030
19gb|AC097062.2| Homo sapiens chromosome 1 clone RP11-428D12, comp... 44 0.47
20gb|AF384675.1| Mus musculus FGF15 (Fgf15) gene, complete cds; BC... 42 1.9
21gb|AC123804.3| Mus musculus BAC clone RP24-140B5 from chromosome... 42 1.9
22gb|AC111653.8| Rattus norvegicus 2 BAC CH230-108E11 (Children's ... 42 1.9
23emb|AL160007.10| Human DNA sequence from clone RP4-798P15 on chr... 42 1.9
24emb|AL139156.11| Human DNA sequence from clone RP4-800M22 on chr... 42 1.9
25gb|AC161763.3| Mus musculus BAC clone RP23-294B14 from chromosom... 42 1.9
26gb|AC151338.2| Xenopus tropicalis clone ISB-347F7, complete sequ... 42 1.9
27gb|AC087565.5| Homo sapiens chromosome 16 clone RP11-53L24, comp... 42 1.9
28gb|AC105754.3| Homo sapiens chromosome 1 clone RP4-814E15, compl... 42 1.9
29gb|AF230739.1|AF230739 Euphorbia esula retinoblastoma-like prote... 42 1.9
30gb|AC113031.11| Mus musculus chromosome 14, clone RP23-220B20, c... 40 7.4
31emb|CR352310.15| Zebrafish DNA sequence from clone CH211-254E10 ... 40 7.4
32ref|XM_647750.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 7.4
33gb|AC111144.8| Mus musculus chromosome 6, clone RP23-373C23, com... 40 7.4
34emb|AL591982.1| Listeria monocytogenes strain EGD, complete geno... 40 7.4
35gb|AC160537.6| Mus musculus chromosome 8, clone RP24-95H19, comp... 40 7.4
36emb|CR354422.7| Zebrafish DNA sequence from clone CH211-129O4 in... 40 7.4
37emb|AL592283.5| Mouse DNA sequence from clone RP23-386C23 on chr... 40 7.4
38dbj|AK056925.1| Homo sapiens cDNA FLJ32363 fis, clone PUAEN1000081 40 7.4
39gb|AC068953.9| Homo sapiens chromosome 8, clone CTD1-2019D9, com... 40 7.4
40gb|AC114310.2| Homo sapiens chromosome 5 clone RP11-285K13, comp... 40 7.4
41gb|AC114956.2| Homo sapiens chromosome 5 clone RP11-159F24, comp... 40 7.4
42gb|AC020708.6| Homo sapiens BAC clone RP11-425B17 from 4, comple... 40 7.4
43gb|AC102680.10| Mus musculus chromosome 8, clone RP24-88L18, com... 40 7.4
44gb|AC023892.35|AC023892 Homo sapiens 12 BAC RP11-937H2 (Roswell ... 40 7.4
45gb|AC007755.6|AC007755 Drosophila melanogaster, chromosome 3R, r... 40 7.4
46gb|AC008482.5|AC008482 Homo sapiens chromosome 5 clone CTC-402A1... 40 7.4
47ref|NM_198566.1| Homo sapiens FLJ32363 protein (FLJ32363), mRNA 40 7.4
48dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete ge... 40 7.4
49gb|AF133675.1|AF133675 Populus tremula x Populus tremuloides ret... 40 7.4
50emb|BX005094.3| Zebrafish DNA sequence from clone CH211-180H17 i... 40 7.4
51gb|BC036867.1| Homo sapiens FLJ32363 protein, mRNA (cDNA clone M... 40 7.4
52emb|BX088722.8| Zebrafish DNA sequence from clone CH211-253P18 i... 40 7.4
53gb|AE003711.3| Drosophila melanogaster chromosome 3R, section 49... 40 7.4
54dbj|AP003468.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 7.4
55gb|AC131790.4| Mus musculus BAC clone RP24-447L18 from 3, comple... 40 7.4
56emb|X83768.1|HSNFKB2PR H.sapiens NFKB2/LYT-10 gene promoter region 40 7.4 
>dbj|AK064987.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D03, full
            insert sequence
          Length = 3332

 Score =  260 bits (131), Expect = 4e-66
 Identities = 260/303 (85%)
 Strand = Plus / Minus

                                                                        
Query: 244  gcaggatccgaagaggcagggacaccatttggttggcccagactgccagctaccactgaa 303
            |||||||||||||||||||   ||||||| |||||||||||||| ||||| ||||| || 
Sbjct: 3022 gcaggatccgaagaggcagaaccaccattgggttggcccagactaccagccaccaccgag 2963

                                                                        
Query: 304  tcgctaaccatgtcaaagtttattcgagtgttgattctcctggtggtgtaatttagacaa 363
            || || |||||||| ||||||||||| ||||||||||||||||| | ||||||||| |  
Sbjct: 2962 tcactcaccatgtcgaagtttattcgtgtgttgattctcctggtagggtaatttaggcgg 2903

                                                                        
Query: 364  ttatttatagcggccaaatcttcagatgagctctgataagcatgggtgctttcaccgata 423
             |||||||||| |||| ||| |  |||| ||||||| |||| || |||||||||||||| 
Sbjct: 2902 ctatttatagcagccagatccttggatgggctctgaaaagcttgagtgctttcaccgatg 2843

                                                                        
Query: 424  caagcataaaaactcctcgaacttggtgaaagcaatgcatccttcttggtttgacgcaga 483
            || || || |||||||  |||||||||||||||||||||||| |||| ||||| || |||
Sbjct: 2842 cacgcgtagaaactccgtgaacttggtgaaagcaatgcatccatcttagtttgtcgtaga 2783

                                                                        
Query: 484  ggagaaatataaacattatgggaagatgagactttctttggggacatatctggtagattt 543
            ||||| | ||| |||||||| ||||||||||||||||| |||||||||||||||| ||||
Sbjct: 2782 ggagagacatacacattatgagaagatgagactttcttcggggacatatctggtaaattt 2723

               
Query: 544  gag 546
            |||
Sbjct: 2722 gag 2720



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 115  ttcacccacttattcagaagaac 137
            |||||||||||||||||||||||
Sbjct: 3151 ttcacccacttattcagaagaac 3129
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>dbj|AK121431.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138G19, full
            insert sequence
          Length = 3384

 Score =  252 bits (127), Expect = 1e-63
 Identities = 259/303 (85%)
 Strand = Plus / Minus

                                                                        
Query: 244  gcaggatccgaagaggcagggacaccatttggttggcccagactgccagctaccactgaa 303
            |||||||||||||||||||   ||||||| |||||||||||||| ||||| ||||| || 
Sbjct: 3063 gcaggatccgaagaggcagaaccaccattgggttggcccagactaccagccaccaccgag 3004

                                                                        
Query: 304  tcgctaaccatgtcaaagtttattcgagtgttgattctcctggtggtgtaatttagacaa 363
            || || |||||||| ||||||||||| |||| |||||||||||| | ||||||||| |  
Sbjct: 3003 tcactcaccatgtcgaagtttattcgtgtgtcgattctcctggtagggtaatttaggcgg 2944

                                                                        
Query: 364  ttatttatagcggccaaatcttcagatgagctctgataagcatgggtgctttcaccgata 423
             |||||||||| |||| ||| |  |||| ||||||| |||| || |||||||||||||| 
Sbjct: 2943 ctatttatagcagccagatccttggatgggctctgaaaagcttgagtgctttcaccgatg 2884

                                                                        
Query: 424  caagcataaaaactcctcgaacttggtgaaagcaatgcatccttcttggtttgacgcaga 483
            || || || |||||||  |||||||||||||||||||||||| |||| ||||| || |||
Sbjct: 2883 cacgcgtagaaactccgtgaacttggtgaaagcaatgcatccatcttagtttgtcgtaga 2824

                                                                        
Query: 484  ggagaaatataaacattatgggaagatgagactttctttggggacatatctggtagattt 543
            ||||| | ||| |||||||| ||||||||||||||||| |||||||||||||||| ||||
Sbjct: 2823 ggagagacatacacattatgagaagatgagactttcttcggggacatatctggtaaattt 2764

               
Query: 544  gag 546
            |||
Sbjct: 2763 gag 2761



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 115  ttcacccacttattcagaagaac 137
            |||||||||||||||||||||||
Sbjct: 3192 ttcacccacttattcagaagaac 3170
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>gb|AF007794.1|AF007794 Zea mays retinoblastoma-related protein 2a (RRB2a) mRNA, partial cds
          Length = 2945

 Score =  220 bits (111), Expect = 4e-54
 Identities = 237/279 (84%)
 Strand = Plus / Minus

                                                                        
Query: 266  caccatttggttggcccagactgccagctaccactgaatcgctaaccatgtcaaagttta 325
            |||||||||| ||||| ||||| |||||||||||||| ||||| ||||||||||||||||
Sbjct: 1200 caccatttggctggcctagactaccagctaccactgagtcgctcaccatgtcaaagttta 1141

                                                                        
Query: 326  ttcgagtgttgattctcctggtggtgtaatttagacaattatttatagcggccaaatctt 385
             |||| |||| | |||||      | |||||||| |   |||||||||| ||||||||||
Sbjct: 1140 atcgactgtttactctccgaccattataatttaggcggctatttatagcagccaaatctt 1081

                                                                        
Query: 386  cagatgagctctgataagcatgggtgctttcaccgatacaagcataaaaactcctcgaac 445
             ||||| |||||||||||||||||||| |||||| || || |||||||||||||| ||||
Sbjct: 1080 tagatgggctctgataagcatgggtgccttcaccaatgcatgcataaaaactcctggaac 1021

                                                                        
Query: 446  ttggtgaaagcaatgcatccttcttggtttgacgcagaggagaaatataaacattatggg 505
            ||||||| |||| |  |||| |||||||||| |||| |||||| | ||| |||||||| |
Sbjct: 1020 ttggtgacagcagtaaatccatcttggtttgccgcaaaggagacacatatacattatgag 961

                                                   
Query: 506  aagatgagactttctttggggacatatctggtagatttg 544
            ||| ||| ||||||||||||||||||||||||| |||||
Sbjct: 960  aagctgaaactttctttggggacatatctggtaaatttg 922



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                        
Query: 68   actgctgctactccctaacacacagatgtacagttgaagcattcgagttcacccacttat 127
            ||||||| | ||| |||||||| | |||||||||| || || || |||  ||||||||||
Sbjct: 1389 actgctggttctcactaacacatacatgtacagttaaatcactccagtcaacccacttat 1330

                     
Query: 128  tcagaagaa 136
            |||||||||
Sbjct: 1329 tcagaagaa 1321
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>gb|AF007795.1|AF007795 Zea mays retinoblastoma-related protein 2b (RRB2b) mRNA, partial cds
          Length = 2538

 Score =  182 bits (92), Expect = 8e-43
 Identities = 158/180 (87%)
 Strand = Plus / Minus

                                                                        
Query: 365  tatttatagcggccaaatcttcagatgagctctgataagcatgggtgctttcaccgatac 424
            |||||||||| |||||||||| ||||| |||||||||||||||||||| |||||| || |
Sbjct: 1672 tatttatagcagccaaatctttagatgggctctgataagcatgggtgccttcaccaatgc 1613

                                                                        
Query: 425  aagcataaaaactcctcgaacttggtgaaagcaatgcatccttcttggtttgacgcagag 484
            | |||||||||||||| ||||||||||| |||| |  |||| |||||||||| |||| ||
Sbjct: 1612 atgcataaaaactcctggaacttggtgacagcagtaaatccatcttggtttgccgcaaag 1553

                                                                        
Query: 485  gagaaatataaacattatgggaagatgagactttctttggggacatatctggtagatttg 544
            |||| | ||| |||||||| |||| ||| ||||||||||||||||||||||||| |||||
Sbjct: 1552 gagacacatatacattatgagaagctgaaactttctttggggacatatctggtaaatttg 1493
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>gb|BT016548.1| Zea mays clone Contig381 mRNA sequence
          Length = 1088

 Score =  167 bits (84), Expect = 5e-38
 Identities = 222/268 (82%)
 Strand = Plus / Minus

                                                                       
Query: 277 tggcccagactgccagctaccactgaatcgctaaccatgtcaaagtttattcgagtgttg 336
           |||||||||||||| ||||||||||| || || |||||||| || |||| |||| |||| 
Sbjct: 525 tggcccagactgccggctaccactgagtcactcaccatgtcgaaatttaatcgactgttt 466

                                                                       
Query: 337 attctcctggtggtgtaatttagacaattatttatagcggccaaatcttcagatgagctc 396
           | | |||||    | |||||||| |   |||||||||| |||||||| | ||||| ||||
Sbjct: 465 actttcctgccattataatttaggcggctatttatagcagccaaatccttagatgggctc 406

                                                                       
Query: 397 tgataagcatgggtgctttcaccgatacaagcataaaaactcctcgaacttggtgaaagc 456
           |||||||||||||||| |||||| || || |||||||||||||| ||||||||||| |||
Sbjct: 405 tgataagcatgggtgccttcaccaatgcatgcataaaaactcctggaacttggtgacagc 346

                                                                       
Query: 457 aatgcatccttcttggtttgacgcagaggagaaatataaacattatgggaagatgagact 516
           | |  ||||  ||||||||| |||| |||||| | ||| |||||||| || | ||| |||
Sbjct: 345 agtagatccaacttggtttgccgcaaaggagacacatatacattatgagatgctgaaact 286

                                       
Query: 517 ttctttggggacatatctggtagatttg 544
           ||||| |||||||||||||||| |||||
Sbjct: 285 ttcttcggggacatatctggtaaatttg 258



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                       
Query: 68  actgctgctactccctaacacacagatgtacagttgaagcattcgagttcacccacttat 127
           ||||||||| ||| |||||||| | |||||||||| || |  |  |||| ||||||||||
Sbjct: 732 actgctgcttctcactaacacatacatgtacagttaaatcgctacagttaacccacttat 673

                    
Query: 128 tcagaagaa 136
           |||||||||
Sbjct: 672 tcagaagaa 664
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>emb|X98923.1|ZMRB1 Z.mays mRNA for Rb1 protein
          Length = 3747

 Score =  167 bits (84), Expect = 5e-38
 Identities = 222/268 (82%)
 Strand = Plus / Minus

                                                                        
Query: 277  tggcccagactgccagctaccactgaatcgctaaccatgtcaaagtttattcgagtgttg 336
            |||||||||||||| ||||||||||| || || |||||||| || |||| |||| |||| 
Sbjct: 2006 tggcccagactgccggctaccactgagtcactcaccatgtcgaaatttaatcgactgttt 1947

                                                                        
Query: 337  attctcctggtggtgtaatttagacaattatttatagcggccaaatcttcagatgagctc 396
            | | |||||    | |||||||| |   |||||||||| |||||||| | ||||| ||||
Sbjct: 1946 actttcctgccattataatttaggcggctatttatagcagccaaatccttagatgggctc 1887

                                                                        
Query: 397  tgataagcatgggtgctttcaccgatacaagcataaaaactcctcgaacttggtgaaagc 456
            |||||||||||||||| |||||| || || |||||||||||||| ||||||||||| |||
Sbjct: 1886 tgataagcatgggtgccttcaccaatgcatgcataaaaactcctggaacttggtgacagc 1827

                                                                        
Query: 457  aatgcatccttcttggtttgacgcagaggagaaatataaacattatgggaagatgagact 516
            | |  ||||  ||||||||| |||| |||||| | ||| |||||||| || | ||| |||
Sbjct: 1826 agtagatccaacttggtttgccgcaaaggagacacatatacattatgagatgctgaaact 1767

                                        
Query: 517  ttctttggggacatatctggtagatttg 544
            ||||| |||||||||||||||| |||||
Sbjct: 1766 ttcttcggggacatatctggtaaatttg 1739



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                        
Query: 68   actgctgctactccctaacacacagatgtacagttgaagcattcgagttcacccacttat 127
            ||||||||| ||| |||||||| | |||||||||| || |  || |||| | ||||||||
Sbjct: 2213 actgctgcttctcactaacacatacatgtacagttaaatcgctccagttaatccacttat 2154

                     
Query: 128  tcagaagaa 136
            |||||||||
Sbjct: 2153 tcagaagaa 2145
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>gb|U52099.2|ZMU52099 Zea mays retinoblastoma-like protein (ZmRB) mRNA, partial cds
          Length = 1841

 Score =  167 bits (84), Expect = 5e-38
 Identities = 222/268 (82%)
 Strand = Plus / Minus

                                                                        
Query: 277  tggcccagactgccagctaccactgaatcgctaaccatgtcaaagtttattcgagtgttg 336
            |||||||||||||| ||||||||||| || || |||||||| || |||| |||| |||| 
Sbjct: 1510 tggcccagactgccggctaccactgagtcactcaccatgtcgaaatttaatcgactgttt 1451

                                                                        
Query: 337  attctcctggtggtgtaatttagacaattatttatagcggccaaatcttcagatgagctc 396
            | | |||||    | |||||||| |   |||||||||| |||||||| | ||||| ||||
Sbjct: 1450 actttcctgccattataatttaggcggctatttatagcagccaaatccttagatgggctc 1391

                                                                        
Query: 397  tgataagcatgggtgctttcaccgatacaagcataaaaactcctcgaacttggtgaaagc 456
            |||||||||||||||| |||||| || || |||||||||||||| ||||||||||| |||
Sbjct: 1390 tgataagcatgggtgccttcaccaatgcatgcataaaaactcctggaacttggtgacagc 1331

                                                                        
Query: 457  aatgcatccttcttggtttgacgcagaggagaaatataaacattatgggaagatgagact 516
            | |  ||||  ||||||||| |||| |||||| | ||| |||||||| || | ||| |||
Sbjct: 1330 agtagatccaacttggtttgccgcaaaggagacacatatacattatgagatgctgaaact 1271

                                        
Query: 517  ttctttggggacatatctggtagatttg 544
            ||||| |||||||||||||||| |||||
Sbjct: 1270 ttcttcggggacatatctggtaaatttg 1243



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                        
Query: 68   actgctgctactccctaacacacagatgtacagttgaagcattcgagttcacccacttat 127
            ||||||||| ||| |||||||| | |||||||||| || |  || |||| | ||||||||
Sbjct: 1718 actgctgcttctcactaacacatacatgtacagttaaatcgctctagttaatccacttat 1659

                
Query: 128  tcag 131
            ||||
Sbjct: 1658 tcag 1655
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>gb|AF250050.1| Zea mays retinoblastoma related protein RBR1 (rbr1) mRNA, complete
            cds
          Length = 2952

 Score =  167 bits (84), Expect = 5e-38
 Identities = 222/268 (82%)
 Strand = Plus / Minus

                                                                        
Query: 277  tggcccagactgccagctaccactgaatcgctaaccatgtcaaagtttattcgagtgttg 336
            |||||||||||||| ||||||||||| || || |||||||| || |||| |||| |||| 
Sbjct: 2644 tggcccagactgccggctaccactgagtcactcaccatgtcgaaatttaatcgactgttt 2585

                                                                        
Query: 337  attctcctggtggtgtaatttagacaattatttatagcggccaaatcttcagatgagctc 396
            | | |||||    | |||||||| |   |||||||||| |||||||| | ||||| ||||
Sbjct: 2584 actttcctgccattataatttaggcggctatttatagcagccaaatccttagatgggctc 2525

                                                                        
Query: 397  tgataagcatgggtgctttcaccgatacaagcataaaaactcctcgaacttggtgaaagc 456
            |||||||||||||||| |||||| || || |||||||||||||| ||||||||||| |||
Sbjct: 2524 tgataagcatgggtgccttcaccaatgcatgcataaaaactcctggaacttggtgacagc 2465

                                                                        
Query: 457  aatgcatccttcttggtttgacgcagaggagaaatataaacattatgggaagatgagact 516
            | |  ||||  ||||||||| |||| |||||| | ||| |||||||| || | ||| |||
Sbjct: 2464 agtagatccaacttggtttgccgcaaaggagacacatatacattatgagatgctgaaact 2405

                                        
Query: 517  ttctttggggacatatctggtagatttg 544
            ||||| |||||||||||||||| |||||
Sbjct: 2404 ttcttcggggacatatctggtaaatttg 2377



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                        
Query: 68   actgctgctactccctaacacacagatgtacagttgaagcattcgagttcacccacttat 127
            ||||||||| ||| |||||||| | |||||||||| || |  |  |||| ||||||||||
Sbjct: 2851 actgctgcttctcactaacacatacatgtacagttaaatcgctacagttaacccacttat 2792

                     
Query: 128  tcagaagaa 136
            |||||||||
Sbjct: 2791 tcagaagaa 2783
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>gb|AF007793.1|AF007793 Zea mays retinoblastoma-related protein 1 (RRB1) mRNA, complete cds
          Length = 4367

 Score =  167 bits (84), Expect = 5e-38
 Identities = 222/268 (82%)
 Strand = Plus / Minus

                                                                        
Query: 277  tggcccagactgccagctaccactgaatcgctaaccatgtcaaagtttattcgagtgttg 336
            |||||||||||||| ||||||||||| || || |||||||| || |||| |||| |||| 
Sbjct: 2624 tggcccagactgccggctaccactgagtcactcaccatgtcgaaatttaatcgactgttt 2565

                                                                        
Query: 337  attctcctggtggtgtaatttagacaattatttatagcggccaaatcttcagatgagctc 396
            | | |||||    | |||||||| |   |||||||||| |||||||| | ||||| ||||
Sbjct: 2564 actttcctgccattataatttaggcggctatttatagcagccaaatccttagatgggctc 2505

                                                                        
Query: 397  tgataagcatgggtgctttcaccgatacaagcataaaaactcctcgaacttggtgaaagc 456
            |||||||||||||||| |||||| || || |||||||||||||| ||||||||||| |||
Sbjct: 2504 tgataagcatgggtgccttcaccaatgcatgcataaaaactcctggaacttggtgacagc 2445

                                                                        
Query: 457  aatgcatccttcttggtttgacgcagaggagaaatataaacattatgggaagatgagact 516
            | |  ||||  ||||||||| |||| |||||| | ||| |||||||| || | ||| |||
Sbjct: 2444 agtagatccaacttggtttgccgcaaaggagacacatatacattatgagatgctgaaact 2385

                                        
Query: 517  ttctttggggacatatctggtagatttg 544
            ||||| |||||||||||||||| |||||
Sbjct: 2384 ttcttcggggacatatctggtaaatttg 2357



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                        
Query: 68   actgctgctactccctaacacacagatgtacagttgaagcattcgagttcacccacttat 127
            ||||||||| ||| |||||||| | |||||||||| || |  || |||| | ||||||||
Sbjct: 2831 actgctgcttctcactaacacatacatgtacagttaaatcgctccagttaatccacttat 2772

                     
Query: 128  tcagaagaa 136
            |||||||||
Sbjct: 2771 tcagaagaa 2763
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>emb|AJ279062.2|ZMA279062 Zea mays rbr2 gene for retinoblastoma-related protein, exons 1-16
          Length = 8716

 Score =  113 bits (57), Expect = 6e-22
 Identities = 84/93 (90%)
 Strand = Plus / Minus

                                                                        
Query: 365  tatttatagcggccaaatcttcagatgagctctgataagcatgggtgctttcaccgatac 424
            |||||||||| |||||||||| ||||| |||||||||||||||||||| |||||| || |
Sbjct: 6748 tatttatagcagccaaatctttagatgggctctgataagcatgggtgccttcaccaatgc 6689

                                             
Query: 425  aagcataaaaactcctcgaacttggtgaaagca 457
            | |||||||||||||| ||||||||||| ||||
Sbjct: 6688 atgcataaaaactcctggaacttggtgacagca 6656



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                        
Query: 266  caccatttggttggcccagactgccagctaccactgaatcgctaaccatgtcaaagttta 325
            |||||||||| ||||| ||||| |||||||||||||| ||||| ||||||||||||||||
Sbjct: 6940 caccatttggctggcctagactaccagctaccactgagtcgctcaccatgtcaaagttta 6881

                      
Query: 326  ttcgagtgtt 335
             |||| ||||
Sbjct: 6880 atcgactgtt 6871



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                        
Query: 468  cttggtttgacgcagaggagaaatataaacattatgggaagatgagactttctttgggga 527
            ||||||||| |||| |||||| | ||| |||||||| |||| ||| ||||||||||||||
Sbjct: 6088 cttggtttgccgcaaaggagacacatatacattatgagaagctgaaactttctttgggga 6029

                             
Query: 528  catatctggtagatttg 544
            ||||||||||| |||||
Sbjct: 6028 catatctggtaaatttg 6012
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>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0080I08, complete sequence
          Length = 197156

 Score =  111 bits (56), Expect = 2e-21
 Identities = 92/104 (88%)
 Strand = Plus / Minus

                                                                         
Query: 244   gcaggatccgaagaggcagggacaccatttggttggcccagactgccagctaccactgaa 303
             |||||||||||||||||||   ||||||| |||||||||||||| ||||| ||||| || 
Sbjct: 38221 gcaggatccgaagaggcagaaccaccattgggttggcccagactaccagccaccaccgag 38162

                                                         
Query: 304   tcgctaaccatgtcaaagtttattcgagtgttgattctcctggt 347
             || || |||||||| ||||||||||| |||||||||||||||||
Sbjct: 38161 tcactcaccatgtcgaagtttattcgtgtgttgattctcctggt 38118



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                         
Query: 472   gtttgacgcagaggagaaatataaacattatgggaagatgagactttctttggggacata 531
             ||||| || |||||||| | ||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 37706 gtttgtcgtagaggagagacatacacattatgagaagatgagactttcttcggggacata 37647

                            
Query: 532   tctggtagatttgag 546
             ||||||| |||||||
Sbjct: 37646 tctggtaaatttgag 37632



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                         
Query: 365   tatttatagcggccaaatcttcagatgagctctgataagcatgggtgctttcaccgatac 424
             |||||||||| |||| ||| |  |||| ||||||| |||| || |||||||||||||| |
Sbjct: 37983 tatttatagcagccagatccttggatgggctctgaaaagcttgagtgctttcaccgatgc 37924

                                                      
Query: 425   aagcataaaaactcctcgaacttggtgaaagcaatgcatcc 465
             | || || |||||||  ||||||||||||||||||||||||
Sbjct: 37923 acgcgtagaaactccgtgaacttggtgaaagcaatgcatcc 37883



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 115   ttcacccacttattcagaagaac 137
             |||||||||||||||||||||||
Sbjct: 38350 ttcacccacttattcagaagaac 38328
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  111 bits (56), Expect = 2e-21
 Identities = 92/104 (88%)
 Strand = Plus / Minus

                                                                            
Query: 244      gcaggatccgaagaggcagggacaccatttggttggcccagactgccagctaccactgaa 303
                |||||||||||||||||||   ||||||| |||||||||||||| ||||| ||||| || 
Sbjct: 18772954 gcaggatccgaagaggcagaaccaccattgggttggcccagactaccagccaccaccgag 18772895

                                                            
Query: 304      tcgctaaccatgtcaaagtttattcgagtgttgattctcctggt 347
                || || |||||||| ||||||||||| |||||||||||||||||
Sbjct: 18772894 tcactcaccatgtcgaagtttattcgtgtgttgattctcctggt 18772851



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                            
Query: 472      gtttgacgcagaggagaaatataaacattatgggaagatgagactttctttggggacata 531
                ||||| || |||||||| | ||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 18772439 gtttgtcgtagaggagagacatacacattatgagaagatgagactttcttcggggacata 18772380

                               
Query: 532      tctggtagatttgag 546
                ||||||| |||||||
Sbjct: 18772379 tctggtaaatttgag 18772365



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                            
Query: 365      tatttatagcggccaaatcttcagatgagctctgataagcatgggtgctttcaccgatac 424
                |||||||||| |||| ||| |  |||| ||||||| |||| || |||||||||||||| |
Sbjct: 18772716 tatttatagcagccagatccttggatgggctctgaaaagcttgagtgctttcaccgatgc 18772657

                                                         
Query: 425      aagcataaaaactcctcgaacttggtgaaagcaatgcatcc 465
                | || || |||||||  ||||||||||||||||||||||||
Sbjct: 18772656 acgcgtagaaactccgtgaacttggtgaaagcaatgcatcc 18772616



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 115      ttcacccacttattcagaagaac 137
                |||||||||||||||||||||||
Sbjct: 18773083 ttcacccacttattcagaagaac 18773061
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  111 bits (56), Expect = 2e-21
 Identities = 92/104 (88%)
 Strand = Plus / Minus

                                                                            
Query: 244      gcaggatccgaagaggcagggacaccatttggttggcccagactgccagctaccactgaa 303
                |||||||||||||||||||   ||||||| |||||||||||||| ||||| ||||| || 
Sbjct: 18933027 gcaggatccgaagaggcagaaccaccattgggttggcccagactaccagccaccaccgag 18932968

                                                            
Query: 304      tcgctaaccatgtcaaagtttattcgagtgttgattctcctggt 347
                || || |||||||| ||||||||||| |||||||||||||||||
Sbjct: 18932967 tcactcaccatgtcgaagtttattcgtgtgttgattctcctggt 18932924



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                            
Query: 472      gtttgacgcagaggagaaatataaacattatgggaagatgagactttctttggggacata 531
                ||||| || |||||||| | ||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 18932512 gtttgtcgtagaggagagacatacacattatgagaagatgagactttcttcggggacata 18932453

                               
Query: 532      tctggtagatttgag 546
                ||||||| |||||||
Sbjct: 18932452 tctggtaaatttgag 18932438



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                            
Query: 365      tatttatagcggccaaatcttcagatgagctctgataagcatgggtgctttcaccgatac 424
                |||||||||| |||| ||| |  |||| ||||||| |||| || |||||||||||||| |
Sbjct: 18932789 tatttatagcagccagatccttggatgggctctgaaaagcttgagtgctttcaccgatgc 18932730

                                                         
Query: 425      aagcataaaaactcctcgaacttggtgaaagcaatgcatcc 465
                | || || |||||||  ||||||||||||||||||||||||
Sbjct: 18932729 acgcgtagaaactccgtgaacttggtgaaagcaatgcatcc 18932689



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 115      ttcacccacttattcagaagaac 137
                |||||||||||||||||||||||
Sbjct: 18933156 ttcacccacttattcagaagaac 18933134
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>gb|AY117036.1| Cocos nucifera retinoblastoma-like protein (Rb1) mRNA, complete cds
          Length = 3699

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 126/152 (82%)
 Strand = Plus / Minus

                                                                        
Query: 393  gctctgataagcatgggtgctttcaccgatacaagcataaaaactcctcgaacttggtga 452
            ||||||||||||||| ||||| || || | |||||||||| | ||| | || ||||||||
Sbjct: 3197 gctctgataagcatgagtgctctcgccaacacaagcataatagctcttggagcttggtga 3138

                                                                        
Query: 453  aagcaatgcatccttcttggtttgacgcagaggagaaatataaacattatgggaagatga 512
            ||||||||||||| |||| | |   |||| |||||||| ||| |||||||| | ||  ||
Sbjct: 3137 aagcaatgcatccatctttgatgatcgcaaaggagaaacatatacattatgagcagcaga 3078

                                            
Query: 513  gactttctttggggacatatctggtagatttg 544
             ||||||||||| ||||||||||| |||||||
Sbjct: 3077 aactttctttggtgacatatctggaagatttg 3046
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>gb|AY109777.1| Zea mays CL1187_-3 mRNA sequence
          Length = 2920

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                        
Query: 437  tcctcgaacttggtgaaagcaatgcatccttcttggtttgacgcagaggagaaatataaa 496
            |||| ||||||||||| |||| |  |||| |||||||||| |||| |||||| | ||| |
Sbjct: 1029 tcctggaacttggtgacagcagtaaatccatcttggtttgccgcaaaggagacacatata 970

                                                            
Query: 497  cattatgggaagatgagactttctttggggacatatctggtagatttg 544
            ||||||| |||| ||| ||||||||||||||||||||||||| |||||
Sbjct: 969  cattatgagaagctgaaactttctttggggacatatctggtaaatttg 922



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 114/137 (83%)
 Strand = Plus / Minus

                                                                        
Query: 266  caccatttggttggcccagactgccagctaccactgaatcgctaaccatgtcaaagttta 325
            |||||||||| ||||| ||||| |||||||||||||| ||||| ||||||||||||||||
Sbjct: 1200 caccatttggctggcctagactaccagctaccactgagtcgctcaccatgtcaaagttta 1141

                                                                        
Query: 326  ttcgagtgttgattctcctggtggtgtaatttagacaattatttatagcggccaaatctt 385
             |||| |||| | |||||      | |||||||| |   |||||||||| ||||||||||
Sbjct: 1140 atcgactgtttactctccgaccattataatttaggcggctatttatagcagccaaatctt 1081

                             
Query: 386  cagatgagctctgataa 402
             ||||| ||||||||||
Sbjct: 1080 tagatgggctctgataa 1064



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                        
Query: 68   actgctgctactccctaacacacagatgtacagttgaagcattcgagttcacccacttat 127
            ||||||| | ||| |||||||| | |||||||||| || || || |||  ||||||||||
Sbjct: 1389 actgctggttctcactaacacatacatgtacagttaaatcactccagtcaacccacttat 1330

                     
Query: 128  tcagaagaa 136
            |||||||||
Sbjct: 1329 tcagaagaa 1321
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>gb|AY109345.1| Zea mays CL1187_1 mRNA sequence
          Length = 4369

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 90/108 (83%)
 Strand = Plus / Minus

                                                                        
Query: 437  tcctcgaacttggtgaaagcaatgcatccttcttggtttgacgcagaggagaaatataaa 496
            |||| ||||||||||| |||| |  ||||  ||||||||| |||| |||||| | ||| |
Sbjct: 2484 tcctggaacttggtgacagcagtagatccaacttggtttgccgcaaaggagacacatata 2425

                                                            
Query: 497  cattatgggaagatgagactttctttggggacatatctggtagatttg 544
            ||||||| || | ||| |||||||| |||||||||||||||| |||||
Sbjct: 2424 cattatgagatgctgaaactttcttcggggacatatctggtaaatttg 2377



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 102/126 (80%)
 Strand = Plus / Minus

                                                                        
Query: 277  tggcccagactgccagctaccactgaatcgctaaccatgtcaaagtttattcgagtgttg 336
            |||||||||||||| ||||||||||| || || |||||||| || |||| |||| |||| 
Sbjct: 2644 tggcccagactgccggctaccactgagtcactcaccatgtcgaaatttaatcgactgttt 2585

                                                                        
Query: 337  attctcctggtggtgtaatttagacaattatttatagcggccaaatcttcagatgagctc 396
            | | |||||    | |||||||| |   |||||||||| |||||||| | ||||| ||||
Sbjct: 2584 actttcctgccattataatttaggcggctatttatagcagccaaatccttagatgggctc 2525

                  
Query: 397  tgataa 402
            ||||||
Sbjct: 2524 tgataa 2519



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 69   ctgctgctactccctaacacacagatgtacagttgaagcattcgagttcacccacttatt 128
            |||||||| ||| |||||||| | |||||||||| || |  || |||| | |||||||||
Sbjct: 2850 ctgctgcttctcactaacacatacatgtacagttaaatcgctccagttaatccacttatt 2791

                    
Query: 129  cagaagaa 136
            ||||||||
Sbjct: 2790 cagaagaa 2783
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>dbj|AB015221.1| Nicotiana tabacum NtRb1 mRNA, complete cds
          Length = 3271

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 393  gctctgataagcatgggtgctttcaccgatacaagcataa 432
            ||||||||||||||| |||||||| || | ||||||||||
Sbjct: 2890 gctctgataagcatgagtgctttctcccacacaagcataa 2851
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>gb|AY699399.1| Nicotiana benthamiana retinoblastoma protein mRNA, complete cds
          Length = 3012

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 393  gctctgataagcatgggtgctttcaccgatacaagcataa 432
            ||||||||||||||| |||||||| || | ||||||||||
Sbjct: 2826 gctctgataagcatgagtgctttctcccacacaagcataa 2787
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>gb|AC097062.2| Homo sapiens chromosome 1 clone RP11-428D12, complete sequence
          Length = 185700

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 5      caacagctggaaaataaaataa 26
              ||||||||||||||||||||||
Sbjct: 120210 caacagctggaaaataaaataa 120189
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>gb|AF384675.1| Mus musculus FGF15 (Fgf15) gene, complete cds; BC1 scRNA gene, complete
              sequence; hypothetical protein and cyclin D1 (Ccnd1) genes,
              complete cds
          Length = 154480

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 386    cagatgagctctgataagcat 406
              |||||||||||||||||||||
Sbjct: 114175 cagatgagctctgataagcat 114195
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>gb|AC123804.3| Mus musculus BAC clone RP24-140B5 from chromosome 7, complete sequence
          Length = 145046

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 386    cagatgagctctgataagcat 406
              |||||||||||||||||||||
Sbjct: 111812 cagatgagctctgataagcat 111792
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>gb|AC111653.8| Rattus norvegicus 2 BAC CH230-108E11 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 247105

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 350    tgtaatttagacaattatttatagc 374
              ||||||||||||||||||| |||||
Sbjct: 121889 tgtaatttagacaattattaatagc 121913
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>emb|AL160007.10| Human DNA sequence from clone RP4-798P15 on chromosome 1q24.1-25.2
             Contains the 3' end of a gene for regucalcin gene promotor
             region related protein (RGPR), DKFZp686C2486, complete
             sequence
          Length = 112732

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 255   agaggcagggacaccatttgg 275
             |||||||||||||||||||||
Sbjct: 28452 agaggcagggacaccatttgg 28432
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>emb|AL139156.11| Human DNA sequence from clone RP4-800M22 on chromosome 1p32.3-34.1
              Contains the 5' end of the MADHIP gene for mothers against
              decapentaplegic (MAD) homolog (Drosophila) interacting
              protein receptor activation anchor, a pseudogene similar to
              part of alcohol dehydrogenase 5 (class III) chi
              polypeptidem (ADH5), a transformer-2 alpha (TRA2A)
              pseudogene, a IAP-associated factor VIAF1 (VIAF1)
              pseudogene, a pseudogene similar to part of ribosomal
              protein L9 (RPL9), the 3' end of the gene for a novel
              protein similar to RNA polymerase B transcription factor 3
              (MGC23908) and a CpG island, complete sequence
          Length = 138985

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 487    gaaatataaacattatgggaa 507
              |||||||||||||||||||||
Sbjct: 132064 gaaatataaacattatgggaa 132084
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>gb|AC161763.3| Mus musculus BAC clone RP23-294B14 from chromosome 7, complete sequence
          Length = 221679

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 386   cagatgagctctgataagcat 406
             |||||||||||||||||||||
Sbjct: 16940 cagatgagctctgataagcat 16920
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>gb|AC151338.2| Xenopus tropicalis clone ISB-347F7, complete sequence
          Length = 73907

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 9     agctggaaaataaaataatac 29
             |||||||||||||||||||||
Sbjct: 48347 agctggaaaataaaataatac 48327
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>gb|AC087565.5| Homo sapiens chromosome 16 clone RP11-53L24, complete sequence
          Length = 192937

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 11    ctggaaaataaaataatacat 31
             |||||||||||||||||||||
Sbjct: 53536 ctggaaaataaaataatacat 53516
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>gb|AC105754.3| Homo sapiens chromosome 1 clone RP4-814E15, complete sequence
          Length = 133799

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 487   gaaatataaacattatgggaa 507
             |||||||||||||||||||||
Sbjct: 35426 gaaatataaacattatgggaa 35446
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>gb|AF230739.1|AF230739 Euphorbia esula retinoblastoma-like protein mRNA, partial cds
          Length = 2625

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 492  ataaacattatgggaagatgagactttctttggggacatatctgg 536
            |||||||||||| || |  || ||||| |||||||||||||||||
Sbjct: 2115 ataaacattatgtgatgcagaaactttttttggggacatatctgg 2071



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 393  gctctgataagcatgggtgctttc 416
            ||||||||||||||| ||||||||
Sbjct: 2214 gctctgataagcatgagtgctttc 2191
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>gb|AC113031.11| Mus musculus chromosome 14, clone RP23-220B20, complete sequence
          Length = 250215

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 352    taatttagacaattatttat 371
              ||||||||||||||||||||
Sbjct: 159238 taatttagacaattatttat 159219
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>emb|CR352310.15| Zebrafish DNA sequence from clone CH211-254E10 in linkage group 24,
             complete sequence
          Length = 181023

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   atttagacaattatttatag 373
             ||||||||||||||||||||
Sbjct: 42573 atttagacaattatttatag 42554
to top
>ref|XM_647750.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (103.t00024)
          partial mRNA
          Length = 1524

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 12 tggaaaataaaataatacat 31
          ||||||||||||||||||||
Sbjct: 57 tggaaaataaaataatacat 38
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>gb|AC111144.8| Mus musculus chromosome 6, clone RP23-373C23, complete sequence
          Length = 198667

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     tcaacagctggaaaataaaa 23
             ||||||||||||||||||||
Sbjct: 72506 tcaacagctggaaaataaaa 72487
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>emb|AL591982.1| Listeria monocytogenes strain EGD, complete genome, segment 10/12
          Length = 295050

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 175    gatgctcatttatttgctcaagaa 198
              |||||| |||||||||||||||||
Sbjct: 280580 gatgcttatttatttgctcaagaa 280557
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>gb|AC160537.6| Mus musculus chromosome 8, clone RP24-95H19, complete sequence
          Length = 188409

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    aaaataaaataatacatcag 34
             ||||||||||||||||||||
Sbjct: 55561 aaaataaaataatacatcag 55580
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>emb|CR354422.7| Zebrafish DNA sequence from clone CH211-129O4 in linkage group 20,
             complete sequence
          Length = 177570

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   gctcatttatttgctcaaga 197
             ||||||||||||||||||||
Sbjct: 51866 gctcatttatttgctcaaga 51847
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>emb|AL592283.5| Mouse DNA sequence from clone RP23-386C23 on chromosome 4, complete
              sequence
          Length = 197763

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 168    tacaggagatgctcatttat 187
              ||||||||||||||||||||
Sbjct: 190135 tacaggagatgctcatttat 190154
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>dbj|AK056925.1| Homo sapiens cDNA FLJ32363 fis, clone PUAEN1000081
          Length = 2441

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 495  aacattatgggaagatgagactttcttt 522
            |||||| || ||||||||||||||||||
Sbjct: 1570 aacattgtgtgaagatgagactttcttt 1597
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>gb|AC068953.9| Homo sapiens chromosome 8, clone CTD1-2019D9, complete sequence
          Length = 176997

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 420    gatacaagcataaaaactcctcgaactt 447
              ||||||||||| ||||||| ||||||||
Sbjct: 154524 gatacaagcatcaaaactcatcgaactt 154497
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>gb|AC114310.2| Homo sapiens chromosome 5 clone RP11-285K13, complete sequence
          Length = 157366

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 495   aacattatgggaagatgagactttcttt 522
             |||||| || ||||||||||||||||||
Sbjct: 41083 aacattgtgtgaagatgagactttcttt 41110
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>gb|AC114956.2| Homo sapiens chromosome 5 clone RP11-159F24, complete sequence
          Length = 104726

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 495   aacattatgggaagatgagactttcttt 522
             |||||| || ||||||||||||||||||
Sbjct: 19579 aacattgtgtgaagatgagactttcttt 19552
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>gb|AC020708.6| Homo sapiens BAC clone RP11-425B17 from 4, complete sequence
          Length = 208360

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   acttattcagaagaacagaa 141
             ||||||||||||||||||||
Sbjct: 72559 acttattcagaagaacagaa 72578
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>gb|AC102680.10| Mus musculus chromosome 8, clone RP24-88L18, complete sequence
          Length = 201260

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     aaaataaaataatacatcag 34
              ||||||||||||||||||||
Sbjct: 154580 aaaataaaataatacatcag 154599
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>gb|AC023892.35|AC023892 Homo sapiens 12 BAC RP11-937H2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 186000

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      caacagctggaaaataaaat 24
              ||||||||||||||||||||
Sbjct: 164077 caacagctggaaaataaaat 164058
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>gb|AC007755.6|AC007755 Drosophila melanogaster, chromosome 3R, region 89A-89B, BAC clone
              BACR04C07, complete sequence
          Length = 173660

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     aaaataaaataatacatcag 34
              ||||||||||||||||||||
Sbjct: 111395 aaaataaaataatacatcag 111376
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>gb|AC008482.5|AC008482 Homo sapiens chromosome 5 clone CTC-402A15, complete sequence
          Length = 172004

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 217    ttccttgacaagaaactaaatgaa 240
              ||||||||||||||||| ||||||
Sbjct: 109151 ttccttgacaagaaactcaatgaa 109174
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>ref|NM_198566.1| Homo sapiens FLJ32363 protein (FLJ32363), mRNA
          Length = 2441

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 495  aacattatgggaagatgagactttcttt 522
            |||||| || ||||||||||||||||||
Sbjct: 1570 aacattgtgtgaagatgagactttcttt 1597
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>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 497     cattatgggaagatgagactttct 520
               |||||||||||||||| |||||||
Sbjct: 3034055 cattatgggaagatgatactttct 3034032
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>gb|AF133675.1|AF133675 Populus tremula x Populus tremuloides retinoblastoma-related protein
            1 (RB1) mRNA, complete cds
          Length = 3572

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 393  gctctgataagcatgggtgctttcaccgatacaagcataa 432
            |||||| |||||||||||||| || || | ||||||||||
Sbjct: 3142 gctctggtaagcatgggtgctctctccaacacaagcataa 3103
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>emb|BX005094.3| Zebrafish DNA sequence from clone CH211-180H17 in linkage group 3,
             complete sequence
          Length = 155431

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    acacagatgtacagttgaag 106
             ||||||||||||||||||||
Sbjct: 63768 acacagatgtacagttgaag 63787
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>gb|BC036867.1| Homo sapiens FLJ32363 protein, mRNA (cDNA clone MGC:46448
            IMAGE:5198039), complete cds
          Length = 2424

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 495  aacattatgggaagatgagactttcttt 522
            |||||| || ||||||||||||||||||
Sbjct: 1518 aacattgtgtgaagatgagactttcttt 1545
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>emb|BX088722.8| Zebrafish DNA sequence from clone CH211-253P18 in linkage group 20,
             complete sequence
          Length = 195359

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   gctcatttatttgctcaaga 197
             ||||||||||||||||||||
Sbjct: 75723 gctcatttatttgctcaaga 75704
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>gb|AE003711.3| Drosophila melanogaster chromosome 3R, section 49 of 118 of the
             complete sequence
          Length = 236475

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    aaaataaaataatacatcag 34
             ||||||||||||||||||||
Sbjct: 61812 aaaataaaataatacatcag 61831
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>dbj|AP003468.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1205B2, complete
             sequence
          Length = 177515

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 420   gatacaagcataaaaactcctcgaactt 447
             ||||||||||| ||||||| ||||||||
Sbjct: 48535 gatacaagcatcaaaactcatcgaactt 48562
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>gb|AC131790.4| Mus musculus BAC clone RP24-447L18 from 3, complete sequence
          Length = 170634

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 350    tgtaatttagacaattattt 369
              ||||||||||||||||||||
Sbjct: 127303 tgtaatttagacaattattt 127284
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>emb|X83768.1|HSNFKB2PR H.sapiens NFKB2/LYT-10 gene promoter region
          Length = 2160

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 276  ttggcccagactgccagctaccac 299
            |||||||||||||||||| |||||
Sbjct: 1608 ttggcccagactgccagccaccac 1631


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,561,005
Number of Sequences: 3902068
Number of extensions: 6561005
Number of successful extensions: 137749
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 137497
Number of HSP's gapped (non-prelim): 251
length of query: 546
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 523
effective length of database: 17,143,297,704
effective search space: 8965944699192
effective search space used: 8965944699192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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