>YO87_SCHPO (O74347) Hypothetical UPF0287 protein C21D10.07 in chromosome II|
          Length = 104

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 21/72 (29%), Positives = 40/72 (55%)
 Frame = -2

Query: 517 HLTLHRHPMCAEIIEEFQKCHVDHPIKKFFGECTDLKIKLDRCFRQEKAVKRKANFEESK 338
           HL ++    CA++I   ++CH      KFFGEC  +K +L  C  +++  K + N E ++
Sbjct: 4   HLDVNNQKQCADLIRALEECHKS--FGKFFGECNTIKYELKACLTKDRNDKARLNRENAR 61

Query: 337 KFKERLQAYKKE 302
             K+ ++  +K+
Sbjct: 62  MRKKVIEENRKK 73

>CP061_MOUSE (Q8K199) C16orf61 protein homolog|
          Length = 79

 Score = 45.4 bits (106), Expect = 9e-05
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = -2

Query: 514 LTLHRHPM-CAEIIEEFQKCHVDHPIKKFFGECTDLKIKLDRCFRQEKAVKRKANFEESK 338
           L+ H H   C  +I   ++CH +H I KFFG C DL  ++ +C + E + +R  + E   
Sbjct: 5   LSPHLHTEECNVLINLLKECHKNHNILKFFGHCNDLDREMRKCLKNEYSERRTRSREHGA 64

Query: 337 KFKERL 320
             + RL
Sbjct: 65  AMRRRL 70

>CP061_HUMAN (Q9NRP2) C16orf61 protein|
          Length = 79

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = -2

Query: 514 LTLHRHPM-CAEIIEEFQKCHVDHPIKKFFGECTDLKIKLDRCFRQEKAVKRKANFEESK 338
           L+ H H   C  +I   ++CH +H I KFFG C D+  +L +C + E    R  + E   
Sbjct: 5   LSPHLHTEECNVLINLLKECHKNHNILKFFGYCNDVDRELRKCLKNEYVENRTKSREHGI 64

Query: 337 KFKERL 320
             +++L
Sbjct: 65  AMRKKL 70

>YLCG_CAEEL (Q8MNU7) Hypothetical UPF0287 protein C35D10.17 in chromosome III|
          Length = 102

 Score = 35.8 bits (81), Expect = 0.072
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = -2

Query: 514 LTLHRHPM-CAEIIEEFQKCHVDHPIKKFFGECTDLKIKLDRCFRQEKAVKRKANFEESK 338
           L+ H H   C  +IE  Q+CH + PI K  G+C+     + +C ++E+  +R  N     
Sbjct: 5   LSPHLHTKECNMLIEFLQRCHSEKPIGKMIGKCSYWDEAVWQCTKKERIWRRDNN----- 59

Query: 337 KFKERLQAYKKEMAE 293
                  AYK+ + E
Sbjct: 60  ------PAYKRRIVE 68

>YLHA_CAEEL (P34365) Hypothetical protein C48B4.11|
          Length = 307

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -3

Query: 258 WIFTEFFFAAILRLQLCETKFRTFLYFMFTSNMYCYKI 145
           +IF  FF  A++ L +C+++F   L+F + S  YC  I
Sbjct: 40  FIFLAFFEFAVVALYVCKSRFLQVLHFQYQSVAYCVPI 77

>RAD50_SULAC (O33600) DNA double-strand break repair rad50 ATPase|
          Length = 886

 Score = 32.3 bits (72), Expect = 0.80
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = -2

Query: 385 RQEKAVKRKANFEESKKFKERLQAYKKEMAEKENE 281
           R+++ +KRK   EE +K  E ++  KKE+ EKE +
Sbjct: 320 RKKEKLKRKKELEEKEKQYEEIEKRKKELEEKEKQ 354

>CE152_HUMAN (O94986) Centrosomal protein of 152 kDa (Cep152 protein)|
          Length = 1275

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
 Frame = -2

Query: 457  HVDHPIKKFFGECTDLKIKLDRCFRQEKAVKRKANF------EESKKFKERLQAYKKEMA 296
            H    ++K   EC DLK KL++C R  + ++RK         EE+ K  E L     +M 
Sbjct: 1077 HCFQELEKAKQECQDLKGKLEKCCRHLQHLERKHKAVVEKIGEENNKVVEELIEENNDMK 1136

Query: 295  EKENE 281
             K  E
Sbjct: 1137 NKLEE 1141

>MDM35_YEAST (O60200) Mitochondrial distribution and morphology protein 35|
          Length = 86

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = -2

Query: 433 FFGECTDLKIKLDRCFRQ---EKAVKRKANFEESKK 335
           F  ECTDLK K D CF +   EK +K K+   E  K
Sbjct: 9   FAPECTDLKTKYDSCFNEWYSEKFLKGKSVENECSK 44

>TRHY_RABIT (P37709) Trichohyalin|
          Length = 1407

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = -2

Query: 442  IKKFFGECTDLKIKLDRCFRQEKAVKRKANFEESKKFKERLQAYKKEMAEKE 287
            +++ F +  D K +L+   RQEK  K+    E  +KF+E  Q  +++  E++
Sbjct: 1040 LEEQFRQERDRKFRLEEQIRQEKEEKQLRRQERDRKFREEEQQRRRQEREQQ 1091

>TRMB_CHLMU (Q9PL91) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)|
           (tRNA(m7G46)-methyltransferase)
          Length = 224

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 214 LKPQDCSKKEFSEDPCPPFESMIHFLSQPFPFYK 315
           +KPQD     F ED CP  E+ + ++   +P Y+
Sbjct: 1   MKPQDLKLPYFWEDRCPKIENHVFYVPSYYPKYE 34

>FPS_DROME (P18106) Tyrosine-protein kinase Fps85D (EC 2.7.10.2) (dFer)|
          Length = 1325

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = -2

Query: 454 VDHPIKKFFGECTDLKIKLDRC--FRQEKAVKRKANFEESKKFKERLQAYKKEMAEKENE 281
           +DH  K+F      L++  D+     Q+K   RKA  EE  K   RL     E+  K++E
Sbjct: 80  LDHQAKQFKFNAEQLEVVCDKLTHLSQDKRKARKAYQEEHAKIAARLNHLTDEVVRKKSE 139

>RANG_HUMAN (P43487) Ran-specific GTPase-activating protein (Ran-binding|
           protein 1) (RanBP1)
          Length = 201

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -2

Query: 397 DRCFRQEKAVKRKANFEESKKFKERLQAYKKEMAEKENES 278
           D C + E    R  N E ++KFK + +  +KE+ E+E ++
Sbjct: 130 DECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKA 169

>SAS4_CAEEL (P34402) Spindle assembly abnormal protein 4|
          Length = 808

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
 Frame = -2

Query: 484 EIIEEFQKCH--VDHPIKKFFGECTD------LKIKLD-RCFRQEKAVKRKANFEESKKF 332
           E+IEEF+KC   V+   +K F +  +       K+K D R   +++ + +K   E +K+F
Sbjct: 367 ELIEEFKKCKKGVEEEFEKKFEKIKEDYDELYEKLKRDQRDLERDQKILKKGTGERNKEF 426

Query: 331 KERLQAYKKEMAEKENES 278
            E +   + ++   E ++
Sbjct: 427 TETIATLRDKLRASETKN 444

>CLPB_HAEIN (P44403) Chaperone clpB|
          Length = 856

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = -2

Query: 403 KLDRCFRQEKAVKRKANFEESKKFKERLQAYKKEMAEKENE 281
           +L+R   Q K  ++    EE +  ++RL+  +KE+AEKE E
Sbjct: 414 RLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELAEKERE 454

>LIN5_CAEEL (P45970) Spindle apparatus protein lin-5 (Abnormal cell lineage|
           protein 5)
          Length = 821

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -2

Query: 385 RQEKAVKRKANFEESKKFKERLQAYKKEMAEKENES 278
           + EKA++ +A    S +F E+L   K  +AEKENE+
Sbjct: 551 KNEKAIRDQA----SAQFAEKLAILKNSLAEKENET 582

>RANG_MOUSE (P34022) Ran-specific GTPase-activating protein (Ran-binding|
           protein 1) (RANBP1) (HpaII tiny fragments locus 9a
           protein)
          Length = 203

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -2

Query: 397 DRCFRQEKAVKRKANFEESKKFKERLQAYKKEMAEKENE 281
           D C + E    R  N E ++KFK + +  +KE+ E+E +
Sbjct: 130 DECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKK 168

>IF2_VIBVY (Q7MI09) Translation initiation factor IF-2|
          Length = 907

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -2

Query: 385 RQEKAVKRKANFEESKKFKERLQAYKKEMAEKENE 281
           RQE+  KRKA  E  +K +E      +EMAEK  E
Sbjct: 202 RQEEEAKRKAEEESQRKLEE-----AREMAEKNKE 231

>IF2_VIBVU (Q8DBW0) Translation initiation factor IF-2|
          Length = 907

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -2

Query: 385 RQEKAVKRKANFEESKKFKERLQAYKKEMAEKENE 281
           RQE+  KRKA  E  +K +E      +EMAEK  E
Sbjct: 202 RQEEEAKRKAEEESQRKLEE-----AREMAEKNKE 231

>RL71_ARATH (P60040) 60S ribosomal protein L7-1|
          Length = 242

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -2

Query: 385 RQEKAVKRKANFEESKKFKERLQAYKKEMAEKENE 281
           +Q     +K N E  K   +R + Y KE AEKE E
Sbjct: 27  KQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKE 61


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,277,956
Number of Sequences: 219361
Number of extensions: 1296416
Number of successful extensions: 3888
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3885
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3927707336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)