ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd25j12 |
|---|---|
| Clone Library Name | barley_pub |
>Y2703_MYCBO (P0A607) Hypothetical protein Mb2703| Length = 429 Score = 42.7 bits (99), Expect = 0.001 Identities = 25/66 (37%), Positives = 37/66 (56%) Frame = -1 Query: 475 WLILAYVSTVAGNLTLLGSAANLIVCEQARRAQFFGYNLSFWSHLRFGVPSTIVVTAIGL 296 W LA + GNLT +G++AN+++ ARRA G +SFW R G VVTA+ + Sbjct: 361 WWALALGADFGGNLTAIGASANVVMLGIARRA---GAPISFWEFTRKGA----VVTAVSI 413 Query: 295 LIVSSY 278 + + Y Sbjct: 414 ALAAIY 419
>Y2684_MYCTU (P0A606) Hypothetical protein Rv2684/MT2758| Length = 429 Score = 42.7 bits (99), Expect = 0.001 Identities = 25/66 (37%), Positives = 37/66 (56%) Frame = -1 Query: 475 WLILAYVSTVAGNLTLLGSAANLIVCEQARRAQFFGYNLSFWSHLRFGVPSTIVVTAIGL 296 W LA + GNLT +G++AN+++ ARRA G +SFW R G VVTA+ + Sbjct: 361 WWALALGADFGGNLTAIGASANVVMLGIARRA---GAPISFWEFTRKGA----VVTAVSI 413 Query: 295 LIVSSY 278 + + Y Sbjct: 414 ALAAIY 419
>Y2685_MYCTU (O07187) Hypothetical protein Rv2685/MT2759| Length = 428 Score = 40.0 bits (92), Expect = 0.006 Identities = 24/66 (36%), Positives = 37/66 (56%) Frame = -1 Query: 475 WLILAYVSTVAGNLTLLGSAANLIVCEQARRAQFFGYNLSFWSHLRFGVPSTIVVTAIGL 296 W LA + GNLT + ++AN+++ ARR+ G +SFW R G VVTA+ L Sbjct: 361 WWALALSADFGGNLTAVAASANVVMLGIARRS---GTPISFWKFTRKGA----VVTAVSL 413 Query: 295 LIVSSY 278 ++ + Y Sbjct: 414 VLSAVY 419
>P_HUMAN (Q04671) P protein (Melanocyte-specific transporter protein)| (Pink-eyed dilution protein homolog) Length = 838 Score = 38.9 bits (89), Expect = 0.013 Identities = 22/57 (38%), Positives = 33/57 (57%) Frame = -1 Query: 466 LAYVSTVAGNLTLLGSAANLIVCEQARRAQFFGYNLSFWSHLRFGVPSTIVVTAIGL 296 LA+ + + GN TL+G++AN +VC A A+ GY SF R G P +V +G+ Sbjct: 772 LAFGACLGGNGTLIGASAN-VVC--AGIAEQHGYGFSFMEFFRLGFPMMVVSCTVGM 825
>P_PIG (Q8MIQ9) P protein (Melanocyte-specific transporter protein)| (Pink-eyed dilution protein homolog) Length = 845 Score = 37.0 bits (84), Expect = 0.049 Identities = 22/57 (38%), Positives = 32/57 (56%) Frame = -1 Query: 466 LAYVSTVAGNLTLLGSAANLIVCEQARRAQFFGYNLSFWSHLRFGVPSTIVVTAIGL 296 LA + + GN TL+G++AN +VC A A+ GY SF R G P +V +G+ Sbjct: 779 LALGACLGGNGTLIGASAN-VVC--AGIAEQHGYGFSFMEFFRLGFPMMVVSCMVGM 832
>P_MOUSE (Q62052) P protein (Melanocyte-specific transporter protein)| (Pink-eyed dilution protein) Length = 833 Score = 34.3 bits (77), Expect = 0.32 Identities = 21/57 (36%), Positives = 31/57 (54%) Frame = -1 Query: 466 LAYVSTVAGNLTLLGSAANLIVCEQARRAQFFGYNLSFWSHLRFGVPSTIVVTAIGL 296 LA + + GN TL+G++ N +VC A A+ GY SF R G P ++ IG+ Sbjct: 767 LALGACLGGNGTLIGASTN-VVC--AGIAEKHGYGFSFMEFFRLGFPVMLMSCTIGM 820
>Y753_SYNY3 (P74635) Hypothetical protein slr0753| Length = 449 Score = 33.1 bits (74), Expect = 0.71 Identities = 18/61 (29%), Positives = 35/61 (57%) Frame = -1 Query: 466 LAYVSTVAGNLTLLGSAANLIVCEQARRAQFFGYNLSFWSHLRFGVPSTIVVTAIGLLIV 287 + + +T+ GN TL+G+++N++ A ++ G +SF LR+G+P V + L V Sbjct: 384 MMFGATLGGNGTLVGASSNIVA---AGISEQHGRPISFHRFLRYGLPVMAVQLVVAALFV 440 Query: 286 S 284 + Sbjct: 441 A 441
>Y456_METJA (Q57898) Hypothetical protein MJ0456| Length = 352 Score = 32.3 bits (72), Expect = 1.2 Identities = 21/56 (37%), Positives = 26/56 (46%) Frame = -1 Query: 571 SNVASNVPTVLLLGTRVXXXXXXXXXXSERKAWLILAYVSTVAGNLTLLGSAANLI 404 S + SNVP +LL K WL +AY + GN TL+ S ANLI Sbjct: 272 SQIISNVPATVLLSHLY-------------KNWLPIAYGVNIGGNGTLIASFANLI 314
>S13A1_HUMAN (Q9BZW2) Solute carrier family 13 member 1 (Renal sodium/sulfate| cotransporter) (Na(+)/sulfate cotransporter) (hNaSi-1) Length = 595 Score = 31.6 bits (70), Expect = 2.1 Identities = 17/54 (31%), Positives = 27/54 (50%) Frame = -1 Query: 472 LILAYVSTVAGNLTLLGSAANLIVCEQARRAQFFGYNLSFWSHLRFGVPSTIVV 311 L +AY ST+ G T+ G++ NLI E L+F S F P+ +++ Sbjct: 242 LCIAYSSTIGGLTTITGTSTNLIFAEYFNTRYPDCRCLNFGSWFTFSFPAALII 295
>SRCA_MOUSE (Q7TQ48) Sarcalumenin precursor| Length = 910 Score = 30.0 bits (66), Expect = 6.0 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -3 Query: 506 GDIAGVGEEGVADTGVCEHGGREPDAARVGGEPDRVRAGE 387 G ++G+ EEG+A+ E GG E D + G P + +GE Sbjct: 345 GQVSGMSEEGLAEASSEEEGGEE-DGSENGEVPFKEESGE 383
>PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS54 precursor| Length = 1901 Score = 29.6 bits (65), Expect = 7.9 Identities = 20/49 (40%), Positives = 24/49 (48%) Frame = -3 Query: 524 GGRVGCGDIAGVGEEGVADTGVCEHGGREPDAARVGGEPDRVRAGEAGA 378 GG+ G G +AG+G G A G G A VGG + AG AGA Sbjct: 351 GGKGGVGGVAGLGGAGGA-AGQLFSAGGAAGAVGVGGTGGQGGAGGAGA 398
>S13A1_RAT (Q07782) Solute carrier family 13 member 1 (Renal sodium/sulfate| cotransporter) (Na(+)/sulfate cotransporter) (NaSi-1) Length = 595 Score = 29.6 bits (65), Expect = 7.9 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = -1 Query: 472 LILAYVSTVAGNLTLLGSAANLIVCEQARRAQFFGYNLSFWSHLRFGVPSTIVV 311 L +AY ST+ G T+ G++ NLI E L+F S F P +++ Sbjct: 242 LCIAYSSTIGGLTTITGTSTNLIFSEHFNTRYPDCRCLNFGSWFLFSFPVAVIL 295 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,888,275 Number of Sequences: 219361 Number of extensions: 873829 Number of successful extensions: 2441 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2347 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2438 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 5972710590 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
