ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd25j11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.... 70 1e-12
2UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1.... 70 1e-12
3UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1.... 70 1e-12
4UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1.... 70 1e-12
5UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1.... 67 1e-11
6UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1.... 67 1e-11
7FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.2... 48 6e-06
8FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271) (GDP-... 44 9e-05
9FCL2_ORYSA (Q67WR5) Putative GDP-L-fucose synthase 2 (EC 1.1.1.2... 43 2e-04
10FCL2_ARATH (Q9LMU0) Putative GDP-L-fucose synthase 2 (EC 1.1.1.2... 42 3e-04
11GME2_ORYSA (Q2R1V8) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (G... 42 5e-04
12GALE_LACHE (Q7WTB1) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact... 40 0.001
13GME1_ORYSA (Q338B5) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (G... 39 0.002
14ARNA_SALTI (Q8Z540) Bifunctional polymyxin resistance arnA prote... 36 0.020
15ARNA_SALPA (Q5PNA6) Bifunctional polymyxin resistance arnA prote... 36 0.020
16RFBE_SALTI (P14169) CDP-paratose 2-epimerase (EC 5.1.3.10) (CDP-... 36 0.020
17GME_ARATH (Q93VR3) GDP-mannose 3,5-epimerase (EC 5.1.3.18) (GDP-... 35 0.033
18GALE_LACCA (O84903) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact... 35 0.057
19ARNA_ECOL6 (Q8FFM1) Bifunctional polymyxin resistance arnA prote... 34 0.074
20ARNA_WIGBR (Q8D341) Bifunctional polymyxin resistance arnA prote... 34 0.097
21EXOB_AZOBR (Q59083) UDP-glucose 4-epimerase (EC 5.1.3.2) (UDP-ga... 34 0.097
22ARNA_SALTY (O52325) Bifunctional polymyxin resistance arnA prote... 33 0.13
23ARNA_SALCH (P0C0R6) Bifunctional polymyxin resistance arnA prote... 33 0.13
24ARNA_PSEAE (Q9HY63) Bifunctional polymyxin resistance arnA prote... 33 0.13
25GALE_STRTR (P21977) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact... 33 0.13
26Y4AF_RHISN (P55353) Hypothetical 34.7 kDa protein y4aF 33 0.17
27ARNA_ECOLI (P77398) Bifunctional polymyxin resistance arnA prote... 32 0.28
28ARNA_ECO57 (Q8XDZ3) Bifunctional polymyxin resistance arnA prote... 32 0.28
29FCL_ECOLI (P32055) GDP-L-fucose synthetase (EC 1.1.1.271) (GDP-4... 32 0.37
30Y1055_METJA (Q58455) Hypothetical protein MJ1055 32 0.37
31GALE_BACHD (Q9KDV3) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact... 32 0.37
32ARNA_SHIFL (Q83QT8) Bifunctional polymyxin resistance arnA prote... 32 0.48
33GALE_STRLI (P13226) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact... 32 0.48
34Y4NL_RHISN (P55584) Hypothetical 38.7 kDa protein y4nL 31 0.63
35ARNA_PSEF5 (Q4KC82) Bifunctional polymyxin resistance arnA prote... 31 0.63
36MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, trac... 31 0.82
37GALE_STRMU (P96995) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact... 31 0.82
38CINA_BACHK (Q6HF34) CinA-like protein 30 1.1
39CINA_BACCZ (Q636P5) CinA-like protein 30 1.1
40CINA_BACC1 (Q732U5) CinA-like protein 30 1.1
41CINA_BACAN (Q81WQ3) CinA-like protein 30 1.1
42GALE_BACSU (P55180) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact... 30 1.1
43GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 dehydratase 1 (EC 4.2.1.47) ... 30 1.1
44YCL2_ECO11 (Q04871) Hypothetical 37.6 kDa protein in cld 5'regio... 30 1.1
45ARNA_PHOLL (Q7N3Q7) Bifunctional polymyxin resistance arnA prote... 30 1.4
46RECO_CHLMU (Q9PJS3) DNA repair protein recO (Recombination prote... 30 1.4
47CAPI_STAAU (P39858) Protein capI 30 1.4
48CINA_BACCR (Q81A15) CinA-like protein 30 1.8
49TR2M_AGRTU (P0A3V3) Tryptophan 2-monooxygenase (EC 1.13.12.3) 30 1.8
50TR2M_AGRT4 (P0A3V2) Tryptophan 2-monooxygenase (EC 1.13.12.3) 30 1.8
51NIR_SPIOL (P05314) Ferredoxin--nitrite reductase, chloroplast pr... 30 1.8
52HSP82_ASHGO (Q8J2M3) Heat shock protein HSP82 30 1.8
53ITA6_MOUSE (Q61739) Integrin alpha-6 precursor (VLA-6) (CD49f an... 29 3.1
54SECA1_MYCLE (P57996) Preprotein translocase secA 1 subunit 29 3.1
55NU2C_MARPO (P06257) NAD(P)H-quinone oxidoreductase chain 2, chlo... 29 3.1
56GMDS_HUMAN (O60547) GDP-mannose 4,6 dehydratase (EC 4.2.1.47) (G... 29 3.1
57TGDS_HUMAN (O95455) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46) 28 4.1
58SECA1_MYCTU (P0A5Y8) Preprotein translocase secA 1 subunit 28 4.1
59SECA1_MYCBO (P0A5Y9) Preprotein translocase secA 1 subunit 28 4.1
60ACSA_PASMU (Q9CMW1) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (A... 28 4.1
61PGK_TETTH (P50313) Phosphoglycerate kinase (EC 2.7.2.3) 28 4.1
62EXOB_RHIME (P26503) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact... 28 4.1
63UVRC_BACSK (Q5WEK8) UvrABC system protein C (Protein uvrC) (Exci... 28 4.1
64MCPA_CAUCR (Q00986) Chemoreceptor mcpA (Methyl-accepting chemota... 28 5.3
65SPSJ_BACSU (P39630) Spore coat polysaccharide biosynthesis prote... 28 5.3
66RLP7_PICJA (P32101) Ribosome biogenesis protein RLP7 (Fragment) 28 5.3
67GMD2_ARATH (P93031) GDP-mannose 4,6 dehydratase 2 (EC 4.2.1.47) ... 28 5.3
68RPOD_PSEAE (P26480) RNA polymerase sigma factor rpoD (Sigma-70) 28 5.3
69ARNA_PSE14 (Q48HZ1) Bifunctional polymyxin resistance arnA prote... 28 6.9
70GM4D_SHIFL (P0AC91) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (G... 28 6.9
71GM4D_ECOLI (P0AC88) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (G... 28 6.9
72GM4D_ECOL6 (P0AC89) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (G... 28 6.9
73GM4D_ECO57 (P0AC90) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (G... 28 6.9
74EFTS_SYNPX (Q7U794) Elongation factor Ts (EF-Ts) 28 6.9
75Y1505_METJA (Q58900) Putative ATP-dependent RNA helicase MJ1505 ... 27 9.1 
>UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 70.1 bits (170), Expect = 1e-12
 Identities = 34/76 (44%), Positives = 46/76 (60%)
 Frame = -3

Query: 389 PINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVV 210
           P+N+GNP E T+LE A+ +K L+     +       DDP++RKPDI KAK +L WEP V 
Sbjct: 320 PVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVP 379

Query: 209 LRDGLVLMEDDFRERL 162
           L +GL      FR+ L
Sbjct: 380 LEEGLNKAIHYFRKEL 395
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>UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 70.1 bits (170), Expect = 1e-12
 Identities = 34/76 (44%), Positives = 46/76 (60%)
 Frame = -3

Query: 389 PINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVV 210
           P+N+GNP E T+LE A+ +K L+     +       DDP++RKPDI KAK +L WEP V 
Sbjct: 320 PVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVP 379

Query: 209 LRDGLVLMEDDFRERL 162
           L +GL      FR+ L
Sbjct: 380 LEEGLNKAIHYFRKEL 395
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>UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 70.1 bits (170), Expect = 1e-12
 Identities = 34/76 (44%), Positives = 46/76 (60%)
 Frame = -3

Query: 389 PINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVV 210
           P+N+GNP E T+LE A+ +K L+     +       DDP++RKPDI KAK +L WEP V 
Sbjct: 320 PVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVP 379

Query: 209 LRDGLVLMEDDFRERL 162
           L +GL      FR+ L
Sbjct: 380 LEEGLNKAIHYFRKEL 395
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>UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 70.1 bits (170), Expect = 1e-12
 Identities = 34/76 (44%), Positives = 46/76 (60%)
 Frame = -3

Query: 389 PINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVV 210
           P+N+GNP E T+LE A+ +K L+     +       DDP++RKPDI KAK +L WEP V 
Sbjct: 320 PVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVP 379

Query: 209 LRDGLVLMEDDFRERL 162
           L +GL      FR+ L
Sbjct: 380 LEEGLNKAIHYFRKEL 395
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>UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UXS-1)
          Length = 418

 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 30/65 (46%), Positives = 42/65 (64%)
 Frame = -3

Query: 389 PINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVV 210
           P+N+GNP E T+LE A+ +K L+     +       DDP++R+PDI KAK +L WEP V 
Sbjct: 318 PVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLLLGWEPVVP 377

Query: 209 LRDGL 195
           L +GL
Sbjct: 378 LEEGL 382
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>UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UXS-1)
          Length = 421

 Score = 66.6 bits (161), Expect = 1e-11
 Identities = 31/76 (40%), Positives = 47/76 (61%)
 Frame = -3

Query: 389 PINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVV 210
           P+N+GNP E ++++ A  +K+L+     ++      DDP++RKPDI KAK +L WEP V 
Sbjct: 321 PVNLGNPQEHSIVQFARLIKQLVGSGGEISFLSEAQDDPQRRKPDIRKAKLLLGWEPVVP 380

Query: 209 LRDGLVLMEDDFRERL 162
           L +GL      FR+ L
Sbjct: 381 LEEGLNKTIHYFRKEL 396
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>FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           1)
          Length = 328

 Score = 47.8 bits (112), Expect = 6e-06
 Identities = 27/80 (33%), Positives = 46/80 (57%)
 Frame = -3

Query: 386 INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVL 207
           +N+G+  E T+ ELAE VKE++  +  +    + PD   ++  D +K +E + W+PKV L
Sbjct: 250 VNVGSGSEVTIKELAELVKEVVGFQGKLVWDSSKPDGTPRKLMDSSKIQE-MGWKPKVPL 308

Query: 206 RDGLVLMEDDFRERLAVPKK 147
           ++GLV     + E +   KK
Sbjct: 309 KEGLVETYKWYVENVISAKK 328
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>FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           1) (AtGER1) (AtFX)
          Length = 312

 Score = 43.9 bits (102), Expect = 9e-05
 Identities = 27/64 (42%), Positives = 36/64 (56%)
 Frame = -3

Query: 386 INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVL 207
           +NIG+  E T+ ELAE VKE++  E  +      PD   ++  D +K    L W PKV L
Sbjct: 236 VNIGSGQEVTIRELAELVKEVVGFEGKLGWDCTKPDGTPRKLMDSSKLAS-LGWTPKVSL 294

Query: 206 RDGL 195
           RDGL
Sbjct: 295 RDGL 298
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>FCL2_ORYSA (Q67WR5) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           2)
          Length = 347

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 23/64 (35%), Positives = 37/64 (57%)
 Frame = -3

Query: 386 INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVL 207
           +N+G+  E T+ ELAE V+ ++  E  V      P+   +R  D  + ++ L WEP+V L
Sbjct: 266 VNVGSGEEVTVRELAEAVRGVVGYEGVVAWDAARPEGVARRVVDSGRMRK-LGWEPRVAL 324

Query: 206 RDGL 195
           RDG+
Sbjct: 325 RDGI 328
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>FCL2_ARATH (Q9LMU0) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           2) (AtGER2)
          Length = 328

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 25/80 (31%), Positives = 42/80 (52%)
 Frame = -3

Query: 386 INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVL 207
           +N+G+  E T+ ELAE VKE++  +  +      PD   ++  D +K    L W PK+ L
Sbjct: 250 VNVGSGVEVTIKELAELVKEVVGFKGKLVWDTTKPDGTPRKLMDSSKLAS-LGWTPKISL 308

Query: 206 RDGLVLMEDDFRERLAVPKK 147
           +DGL    + + E +   K+
Sbjct: 309 KDGLSQTYEWYLENVVQKKQ 328
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>GME2_ORYSA (Q2R1V8) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man|
           3,5-epimerase 2)
          Length = 371

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 30/86 (34%), Positives = 44/86 (51%)
 Frame = -3

Query: 389 PINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVV 210
           P+NIG+    +M E+AE V    N ++ +      P+  R R  D T  KE L W P + 
Sbjct: 260 PVNIGSDEMVSMNEMAEIVLSFENKQLPIHHIPG-PEGVRGRNSDNTLIKEKLGWAPTMR 318

Query: 209 LRDGLVLMEDDFRERLAVPKKAKA*G 132
           L+DGL +     +E+L   +K KA G
Sbjct: 319 LKDGLRITYFWIKEQL---EKEKAEG 341
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>GALE_LACHE (Q7WTB1) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 330

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = -3

Query: 383 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPK 216
           N+G    ++ LE+ E+ K++   ++  TM      DP     D TKA+ VL W+PK
Sbjct: 250 NLGTAHGYSNLEILESAKKVTGIDIPYTMGPRRGGDPDSLVADSTKARTVLGWKPK 305
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>GME1_ORYSA (Q338B5) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man|
           3,5-epimerase 1) (OsGME-1)
          Length = 378

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 23/65 (35%), Positives = 34/65 (52%)
 Frame = -3

Query: 389 PINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVV 210
           P+NIG+    +M E+AE +    + E+ +      P+  R R  D T  KE L W P + 
Sbjct: 267 PVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPG-PEGVRGRNSDNTLIKEKLGWAPTMK 325

Query: 209 LRDGL 195
           L+DGL
Sbjct: 326 LKDGL 330
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>ARNA_SALTI (Q8Z540) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
 Frame = -3

Query: 386 INIGNP-GEFTMLELAENVKELIN---------PEVTVTMTENTP------DDPRQRKPD 255
           INIGNP  E ++ ELA  + +  +         P     + E+         D   RKP 
Sbjct: 563 INIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYYGKGYQDVAHRKPS 622

Query: 254 ITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 144
           I  A+  LDWEP + +RD +    D F   + + ++A
Sbjct: 623 IDNARRCLDWEPSIAMRDTVEETLDFFLRSVDIAERA 659
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>ARNA_SALPA (Q5PNA6) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
 Frame = -3

Query: 386 INIGNP-GEFTMLELAENVKELIN---------PEVTVTMTENTP------DDPRQRKPD 255
           INIGNP  E ++ ELA  + +  +         P     + E+         D   RKP 
Sbjct: 563 INIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYYGKGYQDVAHRKPS 622

Query: 254 ITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 144
           I  A+  LDWEP + +RD +    D F   + + ++A
Sbjct: 623 IDNARRCLDWEPSIAMRDTVEETLDFFLRSVDIAERA 659
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>RFBE_SALTI (P14169) CDP-paratose 2-epimerase (EC 5.1.3.10) (CDP-tyvelose|
           2-epimerase)
          Length = 338

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = -3

Query: 383 NIGNP--GEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVV 210
           NIG       ++LEL + +++  N ++  T       D R    DI K    +DW PKV 
Sbjct: 264 NIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAIDWSPKVS 323

Query: 209 LRDGLVLMED 180
            +DG+  M D
Sbjct: 324 AKDGVQKMYD 333
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>GME_ARATH (Q93VR3) GDP-mannose 3,5-epimerase (EC 5.1.3.18) (GDP-Man|
           3,5-epimerase)
          Length = 377

 Score = 35.4 bits (80), Expect = 0.033
 Identities = 26/86 (30%), Positives = 42/86 (48%)
 Frame = -3

Query: 389 PINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVV 210
           P+NIG+    +M E+AE V      ++ +      P+  R R  D    KE L W P + 
Sbjct: 266 PVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPG-PEGVRGRNSDNNLIKEKLGWAPNMR 324

Query: 209 LRDGLVLMEDDFRERLAVPKKAKA*G 132
           L++GL +     +E++   +K KA G
Sbjct: 325 LKEGLRITYFWIKEQI---EKEKAKG 347
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>GALE_LACCA (O84903) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 331

 Score = 34.7 bits (78), Expect = 0.057
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = -3

Query: 383 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEP 219
           NIG+   F+ LE+    +++   E+  TM      DP        KA+++L W+P
Sbjct: 250 NIGSAHGFSNLEILNAARKVTGQEIPATMGPRRAGDPSTLIASSEKARDILGWKP 304
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>ARNA_ECOL6 (Q8FFM1) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 34.3 bits (77), Expect = 0.074
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
 Frame = -3

Query: 386 INIGNP-GEFTMLELAENV---------KELINPEVTVTMTENTP------DDPRQRKPD 255
           INIGNP  E ++ EL E +         +    P     + E++        D   RKP 
Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVESSSYYGKGYQDVEHRKPS 622

Query: 254 ITKAKEVLDWEPKVVLRD 201
           I  A+  LDWEPK+ +++
Sbjct: 623 IRNARRCLDWEPKIDMQE 640
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>ARNA_WIGBR (Q8D341) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 654

 Score = 33.9 bits (76), Expect = 0.097
 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 19/80 (23%)
 Frame = -3

Query: 386 INIGNP-GEFTMLELAENVKELINPEVTVTMTENTP------------------DDPRQR 264
           INIGNP  E+T+++L    K +IN   +     N P                   D  +R
Sbjct: 562 INIGNPHNEYTIMQLT---KIIINIIYSNNRNYNFPKFSGFNMLSGTNYYGEGYQDIDRR 618

Query: 263 KPDITKAKEVLDWEPKVVLR 204
           KP+I  AK++L+W PK  +R
Sbjct: 619 KPNIDIAKKLLNWTPKTKIR 638
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>EXOB_AZOBR (Q59083) UDP-glucose 4-epimerase (EC 5.1.3.2) (UDP-galactose|
           4-epimerase) (Galactowaldenase)
          Length = 348

 Score = 33.9 bits (76), Expect = 0.097
 Identities = 18/65 (27%), Positives = 30/65 (46%)
 Frame = -3

Query: 386 INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVL 207
           +N G     ++ E+   ++E+   +V  T  +  P DP Q      + +E L W PK   
Sbjct: 257 MNCGYGRGASVREVVRTLEEVSGEQVPATFADRRPGDPPQLVAGADRIREQLGWVPKHDR 316

Query: 206 RDGLV 192
            DG+V
Sbjct: 317 LDGIV 321
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>ARNA_SALTY (O52325) Bifunctional polymyxin resistance arnA protein (Polymyxin|
           resistance protein pmrI) [Includes: UDP-glucuronic acid
           decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase)
           (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose
           formyltransferase (EC 2.1
          Length = 660

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 16/97 (16%)
 Frame = -3

Query: 386 INIGNP-GEFTMLELAENVKELIN---------PEVTVTMTENTP------DDPRQRKPD 255
           INIGNP  E ++ ELA  + +  +         P     + E+         D   RKP 
Sbjct: 563 INIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYYGKGYQDVAHRKPS 622

Query: 254 ITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 144
           I  A+  L WEP + +RD +    D F   + + ++A
Sbjct: 623 IDNARRCLGWEPSIAMRDTVEETLDFFLRSVDIAERA 659
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>ARNA_SALCH (P0C0R6) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -3

Query: 278 DPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 144
           D   RKP I  A+  L WEP + +RD +    D F   + V ++A
Sbjct: 615 DVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFFLRSVDVAERA 659
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>ARNA_PSEAE (Q9HY63) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 662

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -3

Query: 278 DPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKAKA 138
           D   RKP I  A+ +LDW+P + LR+ +    D F       ++A+A
Sbjct: 616 DVAHRKPSIDNARRLLDWQPTIELRETIGKTLDFFLHEALREREAQA 662
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>GALE_STRTR (P21977) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 332

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = -3

Query: 383 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPK 216
           N+G+   F+ L++ E  +++   E+     +  P DP        KA+ VL W+P+
Sbjct: 251 NLGSSTGFSNLQILEAARKVTGKEIPAEKADRRPGDPDILIASSEKARTVLGWKPQ 306
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>Y4AF_RHISN (P55353) Hypothetical 34.7 kDa protein y4aF|
          Length = 314

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 22/76 (28%), Positives = 36/76 (47%)
 Frame = -3

Query: 386 INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVL 207
           INIG+ GE +++ELA  V  ++  +  +    + PD    RK   ++    + W PK  L
Sbjct: 238 INIGSGGEISIIELAHIVCRVVGFKGDIVFDTSKPDG-TPRKLLSSERLVSMGWRPKTSL 296

Query: 206 RDGLVLMEDDFRERLA 159
             GL    + F   +A
Sbjct: 297 ELGLAKSYESFVSNVA 312
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>ARNA_ECOLI (P77398) Bifunctional polymyxin resistance arnA protein (Polymyxin|
           resistance protein pmrI) [Includes: UDP-glucuronic acid
           decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase)
           (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose
           formyltransferase (EC 2.1
          Length = 660

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 16/78 (20%)
 Frame = -3

Query: 386 INIGNP-GEFTMLELAENV---------KELINPEVTVTMTENTP------DDPRQRKPD 255
           INIGNP  E ++ EL E +         +    P     + E++        D   RKP 
Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPS 622

Query: 254 ITKAKEVLDWEPKVVLRD 201
           I  A   LDWEPK+ +++
Sbjct: 623 IRNAHRCLDWEPKIDMQE 640
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>ARNA_ECO57 (Q8XDZ3) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 16/78 (20%)
 Frame = -3

Query: 386 INIGNP-GEFTMLELAENV---------KELINPEVTVTMTENTP------DDPRQRKPD 255
           INIGNP  E ++ EL E +         +    P     + E++        D   RKP 
Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPS 622

Query: 254 ITKAKEVLDWEPKVVLRD 201
           I  A   LDWEPK+ +++
Sbjct: 623 IRNAHHCLDWEPKIDMQE 640
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>FCL_ECOLI (P32055) GDP-L-fucose synthetase (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase)
          Length = 321

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 17/64 (26%), Positives = 34/64 (53%)
 Frame = -3

Query: 386 INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVL 207
           IN+G   + T+ ELA+ + +++  +  V    + PD   ++  D+T+  + L W  ++ L
Sbjct: 243 INVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQ-LGWYHEISL 301

Query: 206 RDGL 195
             GL
Sbjct: 302 EAGL 305
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>Y1055_METJA (Q58455) Hypothetical protein MJ1055|
          Length = 326

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 14/63 (22%), Positives = 33/63 (52%)
 Frame = -3

Query: 383 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLR 204
           N+GN     ++   E +++ +N +           D  +   D++K++++L ++PKV + 
Sbjct: 247 NLGNSKPVKLMYFIELIEKYLNKKAKKKFLPMQDGDVLRTYADLSKSEKLLGYKPKVTIE 306

Query: 203 DGL 195
           +GL
Sbjct: 307 EGL 309
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>GALE_BACHD (Q9KDV3) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 334

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = -3

Query: 383 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPK 216
           N+GN   F++ E+ E  +++    +   +      DP        KA+ +L WEPK
Sbjct: 249 NLGNGKGFSVKEVIEVCRQVTGHPIPAEIAPRRSGDPASLIASSEKAQTILGWEPK 304
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>ARNA_SHIFL (Q83QT8) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 16/78 (20%)
 Frame = -3

Query: 386 INIGNP-GEFTMLELAENV---------KELINPEVTVTMTENTP------DDPRQRKPD 255
           INIGNP  E ++ EL E +         +    P     + E++        D   RKP 
Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSCYYGKGYQDVEHRKPS 622

Query: 254 ITKAKEVLDWEPKVVLRD 201
           I  A   LDWEPK+ +++
Sbjct: 623 IRNAHRCLDWEPKIDMQE 640
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>GALE_STRLI (P13226) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 329

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 20/78 (25%), Positives = 32/78 (41%)
 Frame = -3

Query: 383 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLR 204
           N+GN   F++ E+ E V+ +    +   M      DP         A+E L W P    R
Sbjct: 249 NLGNGNGFSVREVVETVRRVTGHPIPEIMAPRRGRDPAVLVASAGTAREKLGWNPS---R 305

Query: 203 DGLVLMEDDFRERLAVPK 150
             L ++ D +    + PK
Sbjct: 306 ADLAIVSDAWEWHSSHPK 323
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>Y4NL_RHISN (P55584) Hypothetical 38.7 kDa protein y4nL|
          Length = 356

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 12/21 (57%), Positives = 18/21 (85%)
 Frame = -3

Query: 257 DITKAKEVLDWEPKVVLRDGL 195
           DITKA++VL + PK+ LR+G+
Sbjct: 322 DITKARKVLGYAPKIALREGM 342
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>ARNA_PSEF5 (Q4KC82) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 668

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 19/81 (23%)
 Frame = -3

Query: 386 INIGNP-GEFTMLELAENVKELINPEVTVTMTENTP------------------DDPRQR 264
           INIGNP  E ++ +L E   EL+       +  N P                   D   R
Sbjct: 565 INIGNPDNEASIRQLGE---ELLRQFEAHPLRGNFPPFAGFRDVESKAFYGAGYQDVEHR 621

Query: 263 KPDITKAKEVLDWEPKVVLRD 201
           KP I  AK +L+WEP V + +
Sbjct: 622 KPSIDNAKRLLNWEPTVEMSE 642
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>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
           (High molecular weight salivary mucin MG1) (Sublingual
           gland mucin)
          Length = 5703

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = -1

Query: 229 TGSPRSSYVTAWCSWRTTSGSVWQCPRRPRPKATSLR-LAYITNLPEHTHSWVGSSIFV 56
           T SP +S+ T  CS  T SG +WQC   P P   S++  A+I+   E  +   G   +V
Sbjct: 394 TYSPGTSFNTT-CSSCTCSGGLWQCQDLPCPGTCSVQGGAHISTYDEKLYDLHGDCSYV 451
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>GALE_STRMU (P96995) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 333

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = -3

Query: 383 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPK 216
           N+G+   F+ L++ E  +++   ++          DP        KA+EVL W+P+
Sbjct: 252 NLGSSTGFSNLQILEAARKVTGQKIPAEKAARRSGDPDTLIASSEKAREVLGWKPQ 307
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>CINA_BACHK (Q6HF34) CinA-like protein|
          Length = 412

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -3

Query: 347 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 171
           LAENVKEL+  ++ ++ T    PD    ++P        +  EP VV    L       R
Sbjct: 335 LAENVKELLEADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394

Query: 170 ERLA 159
           ER A
Sbjct: 395 ERSA 398
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>CINA_BACCZ (Q636P5) CinA-like protein|
          Length = 412

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -3

Query: 347 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 171
           LAENVKEL+  ++ ++ T    PD    ++P        +  EP VV    L       R
Sbjct: 335 LAENVKELLKADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394

Query: 170 ERLA 159
           ER A
Sbjct: 395 ERSA 398
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>CINA_BACC1 (Q732U5) CinA-like protein|
          Length = 412

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -3

Query: 347 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 171
           LAENVKEL+  ++ ++ T    PD    ++P        +  EP VV    L       R
Sbjct: 335 LAENVKELLKADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394

Query: 170 ERLA 159
           ER A
Sbjct: 395 ERSA 398
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>CINA_BACAN (Q81WQ3) CinA-like protein|
          Length = 412

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -3

Query: 347 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 171
           LAENVKEL+  ++ ++ T    PD    ++P        +  EP VV    L       R
Sbjct: 335 LAENVKELLEADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394

Query: 170 ERLA 159
           ER A
Sbjct: 395 ERSA 398
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>GALE_BACSU (P55180) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 339

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = -3

Query: 383 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPK 216
           N+G    +++LE+ +  +++   EV     +  P D      D  KAK  L WE K
Sbjct: 259 NLGTGTGYSVLEMVKAFEKVSGKEVPYRFADRRPGDIATCFADPAKAKRELGWEAK 314
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>GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 dehydratase 1 (EC 4.2.1.47) (GDP-D-mannose|
           dehydratase 1) (GMD 1)
          Length = 361

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/48 (37%), Positives = 26/48 (54%)
 Frame = -3

Query: 284 PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKAK 141
           P +    K D +KAKE+L W+PKV     + +M D   E L + K+ K
Sbjct: 303 PTEVDNLKGDASKAKEMLGWKPKVGFEKLVKMMVD---EDLELAKREK 347
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>YCL2_ECO11 (Q04871) Hypothetical 37.6 kDa protein in cld 5'region (ORF2)|
          Length = 334

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 14/63 (22%), Positives = 29/63 (46%)
 Frame = -3

Query: 383 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLR 204
           NIGN     +++  + +++ +  E    M    P D  +   D     EV+ + P+  ++
Sbjct: 259 NIGNSSPVELMDYIQALEDALGIEAKKNMLPLQPGDVLETSADTKALYEVIGFTPETTVK 318

Query: 203 DGL 195
           DG+
Sbjct: 319 DGV 321
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>ARNA_PHOLL (Q7N3Q7) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 16/77 (20%)
 Frame = -3

Query: 386 INIGNP-GEFTMLELAE---------NVKELINPEVTVTMTENTP------DDPRQRKPD 255
           INIGNP  E ++ +LAE          +++   P       E+         D   RKP 
Sbjct: 563 INIGNPTNEASIRQLAEILLDSFEDHELRDHFPPFAGFKKVESGSYYGKGYQDVEHRKPS 622

Query: 254 ITKAKEVLDWEPKVVLR 204
           I  A+ +LDW+P + ++
Sbjct: 623 IKNAERLLDWKPTIDMK 639
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>RECO_CHLMU (Q9PJS3) DNA repair protein recO (Recombination protein O)|
          Length = 234

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
 Frame = -1

Query: 256 TSQRQRRFLTGSPRSSYVTAWCSWRTTSGS----------VWQCPRRPRPKATSLRLAYI 107
           T  + R+ L G  ++ + T   S+R    +           WQ   +P P+  SL L ++
Sbjct: 62  TPPKMRKVLQGELKNPFTTIKNSYRLLQSTGKMIQAILKTQWQ--EKPSPQLFSLFLNFL 119

Query: 106 TNLPEHTHSWVGSSIFV 56
             +PE  H +  SS+F+
Sbjct: 120 QRIPETPHPYFFSSMFL 136
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>CAPI_STAAU (P39858) Protein capI|
          Length = 334

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/72 (20%), Positives = 32/72 (44%)
 Frame = -3

Query: 383 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLR 204
           NIGN     ++E  E ++  +  E      +  P D  +   ++      +D++P+  ++
Sbjct: 259 NIGNNSPVRLMEFVEAIENKLGKEARKNYMDLQPGDVPETYANVDDLFRDIDFKPETTIQ 318

Query: 203 DGLVLMEDDFRE 168
           DG+    D + E
Sbjct: 319 DGVNKFVDWYLE 330
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>CINA_BACCR (Q81A15) CinA-like protein|
          Length = 412

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = -3

Query: 347 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 171
           LAENVK+++  ++ ++ T    PD   Q++P        +  EP VV    L       R
Sbjct: 335 LAENVKDVLKADIGISFTGVAGPDASEQKEPGTVFVGLSIKDEPTVVFPLNLSGSRQQIR 394

Query: 170 ERLA 159
           ER A
Sbjct: 395 ERTA 398
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>TR2M_AGRTU (P0A3V3) Tryptophan 2-monooxygenase (EC 1.13.12.3)|
          Length = 755

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
 Frame = -3

Query: 254 ITKAKEVLDWEPKVVLRDGLVLM----EDDFRERLAVPKKAK--------A*GHFPAFGV 111
           I KA   LD+EP+     GLVL+    EDD  + LAVP K +            FPAF  
Sbjct: 586 IAKAVYCLDYEPQDPNGKGLVLISYTWEDDSHKLLAVPDKKERLCLLRDAISRSFPAFAQ 645

Query: 110 H 108
           H
Sbjct: 646 H 646
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>TR2M_AGRT4 (P0A3V2) Tryptophan 2-monooxygenase (EC 1.13.12.3)|
          Length = 755

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
 Frame = -3

Query: 254 ITKAKEVLDWEPKVVLRDGLVLM----EDDFRERLAVPKKAK--------A*GHFPAFGV 111
           I KA   LD+EP+     GLVL+    EDD  + LAVP K +            FPAF  
Sbjct: 586 IAKAVYCLDYEPQDPNGKGLVLISYTWEDDSHKLLAVPDKKERLCLLRDAISRSFPAFAQ 645

Query: 110 H 108
           H
Sbjct: 646 H 646
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>NIR_SPIOL (P05314) Ferredoxin--nitrite reductase, chloroplast precursor (EC|
           1.7.7.1)
          Length = 594

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 19/83 (22%), Positives = 36/83 (43%)
 Frame = -3

Query: 389 PINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVV 210
           P+N   P   T+L  + N +   N  +      +   +     P +  A+     EP+V 
Sbjct: 5   PVNKIIPSSTTLLSSSNNNRRRNNSSIRCQKAVSPAAETAAVSPSVDAAR----LEPRVE 60

Query: 209 LRDGLVLMEDDFRERLAVPKKAK 141
            RDG  +++++FR  +   +K K
Sbjct: 61  ERDGFWVLKEEFRSGINPAEKVK 83
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>HSP82_ASHGO (Q8J2M3) Heat shock protein HSP82|
          Length = 704

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 19/69 (27%), Positives = 32/69 (46%)
 Frame = -3

Query: 350 ELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 171
           ++ ENVKEL     T  +    P +  Q + +        DWE  + ++   V  + +FR
Sbjct: 254 KVKENVKELEELNKTKPLWTRNPSEVTQEEYNAFYKSISNDWEDPLAVKHFSVEGQLEFR 313

Query: 170 ERLAVPKKA 144
             L +PK+A
Sbjct: 314 AILFIPKRA 322
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>ITA6_MOUSE (Q61739) Integrin alpha-6 precursor (VLA-6) (CD49f antigen)|
           [Contains: Integrin alpha-6 heavy chain; Integrin
           alpha-6 light chain]
          Length = 1091

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
 Frame = -3

Query: 377 GNPGEFTMLELAENVKELINP-------EVTVTMTENTPDDPRQRKPDITKAKEVLDWEP 219
           GN  +F+ L + + + EL+         E+TVT + + P +PR+   D  +AK +  +  
Sbjct: 647 GNQDKFSYLPIQKGIPELVLKDQKDIALEITVTNSPSDPRNPRKDGDDAHEAKLIATFPD 706

Query: 218 KVVLRDGLVLMEDDFRERLAVPKK 147
                    L    +RE  A P+K
Sbjct: 707 --------TLTYSAYRELRAFPEK 722
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>SECA1_MYCLE (P57996) Preprotein translocase secA 1 subunit|
          Length = 940

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = -3

Query: 248 KAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKK 147
           KAKE+ + +   ++RDG VL+ D+F  R+ + ++
Sbjct: 296 KAKELFNRDKDYIVRDGEVLIVDEFTGRVLIGRR 329
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>NU2C_MARPO (P06257) NAD(P)H-quinone oxidoreductase chain 2, chloroplast (EC|
           1.6.5.-) (NAD(P)H dehydrogenase, chain 2)
           (NADH-plastoquinone oxidoreductase chain 2)
          Length = 501

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +1

Query: 235 TSFAFVMSGFLWR-GSSGVFSVIVTVTSGLINSFTFSASSSMV 360
           TS + +  GF W  G SG  + I  +T+GL+N+ T+++S + +
Sbjct: 172 TSSSILAYGFSWLYGLSGGETNIQKITNGLLNAETYNSSGTFI 214
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>GMDS_HUMAN (O60547) GDP-mannose 4,6 dehydratase (EC 4.2.1.47) (GDP-D-mannose|
           dehydratase) (GMD)
          Length = 372

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -3

Query: 332 KELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKV 213
           KE     VTV +    P +    + D TKAK+ L+W+P+V
Sbjct: 310 KETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRV 349
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>TGDS_HUMAN (O95455) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)|
          Length = 350

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
 Frame = -3

Query: 383 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDIT----KAKEV--LDWE 222
           NIG   E ++++LA+ + +LI    + +  EN  D    R  +      K++++  L W 
Sbjct: 256 NIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMKSEKIHGLGWR 315

Query: 221 PKVVLRDGLVLMEDDFRE 168
           PKV  ++G+    + +RE
Sbjct: 316 PKVPWKEGIKKTIEWYRE 333
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>SECA1_MYCTU (P0A5Y8) Preprotein translocase secA 1 subunit|
          Length = 949

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -3

Query: 248 KAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKK 147
           KAKE+   +   ++RDG VL+ D+F  R+ + ++
Sbjct: 296 KAKELFSRDKDYIVRDGEVLIVDEFTGRVLIGRR 329
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>SECA1_MYCBO (P0A5Y9) Preprotein translocase secA 1 subunit|
          Length = 949

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -3

Query: 248 KAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKK 147
           KAKE+   +   ++RDG VL+ D+F  R+ + ++
Sbjct: 296 KAKELFSRDKDYIVRDGEVLIVDEFTGRVLIGRR 329
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>ACSA_PASMU (Q9CMW1) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA|
           ligase) (Acyl-activating enzyme)
          Length = 653

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = -2

Query: 225 GAQGRPT*RLGAHGGRLPGAFGSAQEGQGLRPLPCVWRTSPICQSILIVGWVRQYSLLCF 46
           G+ G+P   + + GG L GA  S +     +P    W T+        VGW+  +S +C+
Sbjct: 269 GSTGKPKGIVHSTGGYLLGALNSFRNVFDNKPNDIFWCTAD-------VGWITGHSYVCY 321
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>PGK_TETTH (P50313) Phosphoglycerate kinase (EC 2.7.2.3)|
          Length = 420

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -3

Query: 356 MLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLM 186
           +L+  EN + L+  +  V + E    DP + +  +   K++L+  PK     GLVLM
Sbjct: 11  ILKHIENKRVLMRVDFNVPLKEGKVKDPTRIQGSVPSIKKILEQNPK-----GLVLM 62
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>EXOB_RHIME (P26503) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
          Length = 328

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/57 (24%), Positives = 27/57 (47%)
 Frame = -3

Query: 386 INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPK 216
           +N+G     T+ EL + ++++      +   E    D      +  KA++VL WEP+
Sbjct: 251 LNLGTGTGTTVKELLDAIEKVAKRPFNIGYAERREGDSTTLVANNDKARQVLGWEPQ 307
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>UVRC_BACSK (Q5WEK8) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 594

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = -3

Query: 350 ELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLME 183
           E++E   + +  E+T  +     D   Q +  + KA E LD+E    LRD +  ME
Sbjct: 174 EVSEETNQTMVNEITKFLKNGHSDIKEQLRERMEKAAEDLDFERAKELRDTIAQME 229
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>MCPA_CAUCR (Q00986) Chemoreceptor mcpA (Methyl-accepting chemotaxis protein)|
          Length = 657

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = -3

Query: 347 LAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVL--RDGLVLMEDD 177
           LAE +++L + ++T  +T + P D R+ K D   A   L    KV+    DGL    D+
Sbjct: 306 LAEGLEKLASGDLTFRVTADFPGDYRKLKDDFNAAMGSLQETMKVIAASTDGLSTGADE 364
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>SPSJ_BACSU (P39630) Spore coat polysaccharide biosynthesis protein spsJ|
          Length = 315

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = -3

Query: 383 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLR 204
           NIG   E T  ELA  + + +  E      E+     R+   + +K K  L W  +V   
Sbjct: 241 NIGGGNERTNKELASVILKHLGCEELFAHVEDRKGHDRRYAINASKLKNELGWRQEVTFE 300

Query: 203 DGL 195
           +G+
Sbjct: 301 EGI 303
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>RLP7_PICJA (P32101) Ribosome biogenesis protein RLP7 (Fragment)|
          Length = 212

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = -3

Query: 341 ENVKELINPEVTVTMTENTPDDPRQRK-PDITKAKEVLDWEPKVVLRDGLVLMEDDFRER 165
           + V++L+    TVT+T    ++PRQ K  D    +E L  E       G++ +ED   E 
Sbjct: 93  QTVRQLVQKRATVTVTHANDEEPRQVKLNDNNLVEEKLGDE-------GIICIEDIIHET 145

Query: 164 LAVPKKAKA*GHF 126
             +    K   HF
Sbjct: 146 SHLATTFKTVTHF 158
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>GMD2_ARATH (P93031) GDP-mannose 4,6 dehydratase 2 (EC 4.2.1.47) (GDP-D-mannose|
           dehydratase 2) (GMD 2)
          Length = 373

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = -3

Query: 257 DITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKAK 141
           D +KAKEVL W+P+V     + +M D   E L + K+ K
Sbjct: 324 DASKAKEVLGWKPQVGFEKLVKMMVD---EDLELAKREK 359
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>RPOD_PSEAE (P26480) RNA polymerase sigma factor rpoD (Sigma-70)|
          Length = 617

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 240 LCLCDVRLPLARVIRSVLSHRHCHLWVDQLLHVLSKF 350
           LC+ D R+P A  +R   +H     WVD +L    K+
Sbjct: 294 LCVRDARMPRADFLRLFPNHETDEKWVDSVLKSKPKY 330
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>ARNA_PSE14 (Q48HZ1) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 663

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 20/96 (20%)
 Frame = -3

Query: 386 INIGNP-GEFTMLELAENVKELINPEVTVTMTENTP------------------DDPRQR 264
           INIGNP  E ++ +L E   EL+       +  N P                   D   R
Sbjct: 565 INIGNPDNEASIRQLGE---ELLRQFEAHPLRGNFPPFAGFREVESQSFYGKGYQDVSHR 621

Query: 263 KPDITKAKEVLDWEPKVVLRDGLVLMEDDF-RERLA 159
           KP I  A++++ W P + L + +    D F RE +A
Sbjct: 622 KPSIDNARQLIGWTPGIELSETIGKTLDFFLREAMA 657
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>GM4D_SHIFL (P0AC91) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose|
           dehydratase)
          Length = 373

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 8/34 (23%)
 Frame = -3

Query: 278 DPRQRKP--------DITKAKEVLDWEPKVVLRD 201
           DPR  +P        D TKA E L W+P++ LR+
Sbjct: 308 DPRYFRPAEVETLLGDPTKAHEKLGWKPEITLRE 341
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>GM4D_ECOLI (P0AC88) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose|
           dehydratase)
          Length = 373

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 8/34 (23%)
 Frame = -3

Query: 278 DPRQRKP--------DITKAKEVLDWEPKVVLRD 201
           DPR  +P        D TKA E L W+P++ LR+
Sbjct: 308 DPRYFRPAEVETLLGDPTKAHEKLGWKPEITLRE 341
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>GM4D_ECOL6 (P0AC89) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose|
           dehydratase)
          Length = 373

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 8/34 (23%)
 Frame = -3

Query: 278 DPRQRKP--------DITKAKEVLDWEPKVVLRD 201
           DPR  +P        D TKA E L W+P++ LR+
Sbjct: 308 DPRYFRPAEVETLLGDPTKAHEKLGWKPEITLRE 341
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>GM4D_ECO57 (P0AC90) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose|
           dehydratase)
          Length = 373

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 8/34 (23%)
 Frame = -3

Query: 278 DPRQRKP--------DITKAKEVLDWEPKVVLRD 201
           DPR  +P        D TKA E L W+P++ LR+
Sbjct: 308 DPRYFRPAEVETLLGDPTKAHEKLGWKPEITLRE 341
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>EFTS_SYNPX (Q7U794) Elongation factor Ts (EF-Ts)|
          Length = 219

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 11/59 (18%)
 Frame = -3

Query: 317 PEVTVTMTENTPDDPRQRKPDITKAKEVLDWEP---KVVLRDG--------LVLMEDDF 174
           P V    T++ PD+ R+R+  I   ++ LD +P   KV + +G        L LME  F
Sbjct: 106 PNVEYVSTDDIPDEIREREKAIEMGRDDLDGKPEQMKVKIVEGRIGKRLKELALMEQPF 164
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>Y1505_METJA (Q58900) Putative ATP-dependent RNA helicase MJ1505 (EC 3.6.1.-)|
          Length = 778

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/70 (21%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
 Frame = -3

Query: 350 ELAENVKELINPEVT--VTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDD 177
           E+ E  +E+   E+     + E T ++  + K  +T    +LD+  ++ +++     ED 
Sbjct: 507 EIKEETEEIKEKEIESKTAVKEETKEEEEKTKKPVT----ILDFIKQIEVKERSKSEEDK 562

Query: 176 FRERLAVPKK 147
            ++ + +PKK
Sbjct: 563 IKQEIKIPKK 572


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,405,901
Number of Sequences: 219361
Number of extensions: 1145815
Number of successful extensions: 3393
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 3308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3387
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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